Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:50:08 (175438): wrapper (7.7.26015): starting
08:50:08 (175438): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 08:50:08] Arguments: --nthreads 8
[2025-11-27 08:50:08] Threads: 8
[2025-11-27 08:50:08] Checking for CVMFS
[2025-11-27 08:50:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 08:50:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 08:50:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 08:50:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 08:50:10] 2.13.3.0 7385 31508 255824 153366 1 590 22668690 32503808 72835 16776704 0 460260761 99.665 390676109 48623 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 08:50:10] CVMFS is ok
[2025-11-27 08:50:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 08:50:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 08:50:10] Further information can be found at the LHC@home message board.
[2025-11-27 08:50:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 08:50:10] Checking for apptainer binary...
[2025-11-27 08:50:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 08:50:10] Running /usr/bin/apptainer --version
[2025-11-27 08:50:10] apptainer version 1.4.4-1.el9
[2025-11-27 08:50:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 08:50:11] c8-7-1.aglt2.org
[2025-11-27 08:50:11] apptainer works
[2025-11-27 08:50:11] Set ATHENA_PROC_NUMBER=8
[2025-11-27 08:50:11] Set ATHENA_CORE_NUMBER=8
[2025-11-27 08:50:11] Starting ATLAS job with PandaID=6898039435
[2025-11-27 08:50:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 16:51:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 16:51:04] 2025-11-27 21:50:25,479 | INFO     | monitor loop #1619: job 0:6898039435 is in state 'finished'
[2025-11-27 16:51:04] 2025-11-27 21:50:25,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:51:04] 2025-11-27 21:50:26,517 | INFO     | time since job start (28722s) is within the limit (172800.0s)
[2025-11-27 16:51:04] 2025-11-27 21:50:27,212 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 16:51:04] 2025-11-27 21:50:27,229 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.137078125
[2025-11-27 16:51:04] 2025-11-27 21:50:27,267 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6898039435/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 16:51:04] 2025-11-27 21:50:27,268 | INFO     | extracted standard info from prmon json
[2025-11-27 16:51:04] 2025-11-27 21:50:27,268 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 16:51:04] 2025-11-27 21:50:27,268 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 16:51:04] 2025-11-27 21:50:27,281 | INFO     | fitting pss+swap vs Time
[2025-11-27 16:51:04] 2025-11-27 21:50:27,282 | INFO     | sum of square deviations: 31583680596.05562
[2025-11-27 16:51:04] 2025-11-27 21:50:27,292 | INFO     | sum of deviations: 344297837398.34283
[2025-11-27 16:51:04] 2025-11-27 21:50:27,292 | INFO     | mean x: 1764265912.044968
[2025-11-27 16:51:04] 2025-11-27 21:50:27,292 | INFO     | mean y: 2803847.5074946466
[2025-11-27 16:51:04] 2025-11-27 21:50:27,292 | INFO     | intersect: -19229689853.323486
[2025-11-27 16:51:04] 2025-11-27 21:50:27,293 | INFO     | chi2: 15.740647430024843
[2025-11-27 16:51:04] 2025-11-27 21:50:27,294 | INFO     | sum of square deviations: 30580266428.03682
[2025-11-27 16:51:04] 2025-11-27 21:50:27,303 | INFO     | sum of deviations: 503919850236.3435
[2025-11-27 16:51:04] 2025-11-27 21:50:27,304 | INFO     | mean x: 1764265759.556277
[2025-11-27 16:51:04] 2025-11-27 21:50:27,304 | INFO     | mean y: 2828117.9675324676
[2025-11-27 16:51:04] 2025-11-27 21:50:27,304 | INFO     | intersect: -29069794235.564484
[2025-11-27 16:51:04] 2025-11-27 21:50:27,304 | INFO     | chi2: 12.213186838075346
[2025-11-27 16:51:04] 2025-11-27 21:50:27,304 | INFO     | current chi2=12.213186838075346 (change=22.409882488194004 %)
[2025-11-27 16:51:04] 2025-11-27 21:50:27,304 | INFO     | right removable region: 461
[2025-11-27 16:51:04] 2025-11-27 21:50:27,304 | INFO     | sum of square deviations: 30579968748.036823
[2025-11-27 16:51:04] 2025-11-27 21:50:27,315 | INFO     | sum of deviations: 154326160623.94794
[2025-11-27 16:51:04] 2025-11-27 21:50:27,315 | INFO     | mean x: 1764266064.556277
[2025-11-27 16:51:04] 2025-11-27 21:50:27,315 | INFO     | mean y: 2832706.1558441557
[2025-11-27 16:51:04] 2025-11-27 21:50:27,315 | INFO     | intersect: -8900786859.497633
[2025-11-27 16:51:04] 2025-11-27 21:50:27,315 | INFO     | chi2: 11.101989941060857
[2025-11-27 16:51:04] 2025-11-27 21:50:27,315 | INFO     | current chi2=11.101989941060857 (change=29.469292858411126 %)
[2025-11-27 16:51:04] 2025-11-27 21:50:27,316 | INFO     | sum of square deviations: 29597745674.897102
[2025-11-27 16:51:04] 2025-11-27 21:50:27,327 | INFO     | sum of deviations: 864831657.03302
[2025-11-27 16:51:04] 2025-11-27 21:50:27,328 | INFO     | mean x: 1764266217.0678337
[2025-11-27 16:51:04] 2025-11-27 21:50:27,328 | INFO     | mean y: 2856525.06345733
[2025-11-27 16:51:04] 2025-11-27 21:50:27,328 | INFO     | intersect: -48694471.17502416
[2025-11-27 16:51:04] 2025-11-27 21:50:27,328 | INFO     | chi2: 8.240231596271151
[2025-11-27 16:51:04] 2025-11-27 21:50:27,328 | INFO     | current chi2=8.240231596271151 (change=25.776985567294158 %)
[2025-11-27 16:51:04] 2025-11-27 21:50:27,328 | INFO     | sum of square deviations: 28636806448.289825
[2025-11-27 16:51:04] 2025-11-27 21:50:27,343 | INFO     | sum of deviations: -38799645296.099686
[2025-11-27 16:51:04] 2025-11-27 21:50:27,343 | INFO     | mean x: 1764266369.5774336
[2025-11-27 16:51:04] 2025-11-27 21:50:27,343 | INFO     | mean y: 2862795.931415929
[2025-11-27 16:51:04] 2025-11-27 21:50:27,343 | INFO     | intersect: 2393244889.3764033
[2025-11-27 16:51:04] 2025-11-27 21:50:27,344 | INFO     | chi2: 7.982573596382151
[2025-11-27 16:51:04] 2025-11-27 21:50:27,344 | INFO     | current chi2=7.982573596382151 (change=3.1268295906342587 %)
[2025-11-27 16:51:04] 2025-11-27 21:50:27,344 | INFO     | left removable region: 30
[2025-11-27 16:51:04] 2025-11-27 21:50:27,344 | INFO     | sum of square deviations: 24828162363.429287
[2025-11-27 16:51:04] 2025-11-27 21:50:27,353 | INFO     | sum of deviations: 105841391507.18784
[2025-11-27 16:51:04] 2025-11-27 21:50:27,353 | INFO     | mean x: 1764266644.1136892
[2025-11-27 16:51:04] 2025-11-27 21:50:27,353 | INFO     | mean y: 2901237.7308584685
[2025-11-27 16:51:04] 2025-11-27 21:50:27,353 | INFO     | intersect: -7518091813.198978
[2025-11-27 16:51:04] 2025-11-27 21:50:27,354 | INFO     | chi2: 3.605277812500081
[2025-11-27 16:51:04] 2025-11-27 21:50:27,354 | INFO     | current memory leak: 4.26 B/s (using 431 data points, chi2=3.61)
[2025-11-27 16:51:04] 2025-11-27 21:50:27,354 | INFO     | could have reported an average CPU frequency of 3795 MHz (19 samples)
[2025-11-27 16:51:04] 2025-11-27 21:50:27,355 | INFO     | ..............................
[2025-11-27 16:51:04] 2025-11-27 21:50:27,355 | INFO     | . Timing measurements:
[2025-11-27 16:51:04] 2025-11-27 21:50:27,355 | INFO     | . get job = 0 s
[2025-11-27 16:51:04] 2025-11-27 21:50:27,355 | INFO     | . initial setup = 3 s
[2025-11-27 16:51:04] 2025-11-27 21:50:27,355 | INFO     | . payload setup = 56 s
[2025-11-27 16:51:04] 2025-11-27 21:50:27,355 | INFO     | . stage-in = 0 s
[2025-11-27 16:51:04] 2025-11-27 21:50:27,355 | INFO     | . payload execution = 28515 s
[2025-11-27 16:51:04] 2025-11-27 21:50:27,355 | INFO     | . stage-out = 6 s
[2025-11-27 16:51:04] 2025-11-27 21:50:27,355 | INFO     | . log creation = 1 s
[2025-11-27 16:51:04] 2025-11-27 21:50:27,355 | INFO     | ..............................
[2025-11-27 16:51:04] 2025-11-27 21:50:27,408 | INFO     | 
[2025-11-27 16:51:04] 2025-11-27 21:50:27,408 | INFO     | job summary report
[2025-11-27 16:51:04] 2025-11-27 21:50:27,408 | INFO     | --------------------------------------------------
[2025-11-27 16:51:04] 2025-11-27 21:50:27,408 | INFO     | PanDA job id: 6898039435
[2025-11-27 16:51:04] 2025-11-27 21:50:27,408 | INFO     | task id: 47556161
[2025-11-27 16:51:04] 2025-11-27 21:50:27,408 | INFO     | errors: (none)
[2025-11-27 16:51:04] 2025-11-27 21:50:27,408 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 16:51:04] 2025-11-27 21:50:27,408 | INFO     | pilot state: finished 
[2025-11-27 16:51:04] 2025-11-27 21:50:27,408 | INFO     | transexitcode: 0
[2025-11-27 16:51:04] 2025-11-27 21:50:27,408 | INFO     | exeerrorcode: 0
[2025-11-27 16:51:04] 2025-11-27 21:50:27,408 | INFO     | exeerrordiag: 
[2025-11-27 16:51:04] 2025-11-27 21:50:27,408 | INFO     | exitcode: 0
[2025-11-27 16:51:04] 2025-11-27 21:50:27,408 | INFO     | exitmsg: OK
[2025-11-27 16:51:04] 2025-11-27 21:50:27,408 | INFO     | cpuconsumptiontime: 131298 s
[2025-11-27 16:51:04] 2025-11-27 21:50:27,409 | INFO     | nevents: 1000
[2025-11-27 16:51:04] 2025-11-27 21:50:27,409 | INFO     | neventsw: 0
[2025-11-27 16:51:04] 2025-11-27 21:50:27,409 | INFO     | pid: 258900
[2025-11-27 16:51:04] 2025-11-27 21:50:27,409 | INFO     | pgrp: 258900
[2025-11-27 16:51:04] 2025-11-27 21:50:27,409 | INFO     | corecount: 8
[2025-11-27 16:51:04] 2025-11-27 21:50:27,409 | INFO     | event service: False
[2025-11-27 16:51:04] 2025-11-27 21:50:27,409 | INFO     | sizes: {0: 2284092, 1: 2284291, 12: 2284291, 23: 2284319, 34: 2284347, 44: 2284375, 47: 2284793, 55: 2284849, 28573: 2322333, 28580: 2331327, 28582: 2331383, 28627
[2025-11-27 16:51:04] 2025-11-27 21:50:27,409 | INFO     | --------------------------------------------------
[2025-11-27 16:51:04] 2025-11-27 21:50:27,409 | INFO     | 
[2025-11-27 16:51:04] 2025-11-27 21:50:27,409 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 16:51:04] 2025-11-27 21:50:27,631 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,633 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,633 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,633 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | job 6898039435 has completed (purged errors)
[2025-11-27 16:51:04] 2025-11-27 21:50:27,634 | INFO     | overall cleanup function is called
[2025-11-27 16:51:04] 2025-11-27 21:50:28,664 | INFO     | --- collectZombieJob: --- 10, [258900]
[2025-11-27 16:51:04] 2025-11-27 21:50:28,664 | INFO     | zombie collector waiting for pid 258900
[2025-11-27 16:51:04] 2025-11-27 21:50:28,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 16:51:04] 2025-11-27 21:50:28,664 | INFO     | collected zombie processes
[2025-11-27 16:51:04] 2025-11-27 21:50:28,664 | INFO     | will attempt to kill all subprocesses of pid=258900
[2025-11-27 16:51:04] 2025-11-27 21:50:31,033 | INFO     | process IDs to be killed: [258900] (in reverse order)
[2025-11-27 16:51:04] 2025-11-27 21:50:31,337 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 16:51:04] 2025-11-27 21:50:31,337 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 16:51:04] 2025-11-27 21:50:31,462 | INFO     | did not find any defunct processes belonging to 258900
[2025-11-27 16:51:04] 2025-11-27 21:50:31,551 | INFO     | did not find any defunct processes belonging to 258900
[2025-11-27 16:51:04] 2025-11-27 21:50:31,555 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 16:51:04] 2025-11-27 21:50:31,555 | INFO     | ready for new job
[2025-11-27 16:51:04] 2025-11-27 21:50:31,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 16:51:04] 2025-11-27 21:50:31,558 | INFO     | ***************************************
[2025-11-27 16:51:04] 2025-11-27 21:50:31,558 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 16:51:04] 2025-11-27 21:50:31,558 | INFO     | ***************************************
[2025-11-27 16:51:04] 2025-11-27 21:50:31,558 | INFO     | 
[2025-11-27 16:51:04] 2025-11-27 21:50:31,570 | INFO     | architecture information:
[2025-11-27 16:51:04] 2025-11-27 21:50:31,570 | INFO     | executing command: cat /etc/os-release
[2025-11-27 16:51:04] 2025-11-27 21:50:31,629 | INFO     | cat /etc/os-release:
[2025-11-27 16:51:04] NAME="CentOS Linux"
[2025-11-27 16:51:04] VERSION="7 (Core)"
[2025-11-27 16:51:04] ID="centos"
[2025-11-27 16:51:04] ID_LIKE="rhel fedora"
[2025-11-27 16:51:04] VERSION_ID="7"
[2025-11-27 16:51:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 16:51:04] ANSI_COLOR="0;31"
[2025-11-27 16:51:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 16:51:04] HOME_URL="https://www.centos.org/"
[2025-11-27 16:51:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 16:51:04] 
[2025-11-27 16:51:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 16:51:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 16:51:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 16:51:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 16:51:04] 
[2025-11-27 16:51:04] 2025-11-27 21:50:31,629 | INFO     | ***************************************
[2025-11-27 16:51:04] 2025-11-27 21:50:32,132 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 16:51:04] 2025-11-27 21:50:32,206 | INFO     | sufficient remaining disk space (81317068800 B)
[2025-11-27 16:51:04] 2025-11-27 21:50:32,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 16:51:04] 2025-11-27 21:50:32,207 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 16:51:04] 2025-11-27 21:50:32,207 | INFO     | update_server=False
[2025-11-27 16:51:04] 2025-11-27 21:50:32,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 16:51:04] 2025-11-27 21:50:32,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:51:04] 2025-11-27 21:50:32,207 | INFO     | aborting loop
[2025-11-27 16:51:04] 2025-11-27 21:50:32,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 16:51:04] 2025-11-27 21:50:32,370 | INFO     | all data control threads have been joined
[2025-11-27 16:51:04] 2025-11-27 21:50:32,424 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:51:04] 2025-11-27 21:50:33,064 | INFO     | all job control threads have been joined
[2025-11-27 16:51:04] 2025-11-27 21:50:33,213 | INFO     | [job] retrieve thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:33,213 | INFO     | [job] job monitor thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:33,302 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:33,376 | INFO     | [data] control thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:33,435 | INFO     | [job] queue monitor thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:33,502 | INFO     | [payload] failed_post thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:33,576 | INFO     | all payload control threads have been joined
[2025-11-27 16:51:04] 2025-11-27 21:50:33,704 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:34,070 | INFO     | [job] control thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:34,104 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:34,104 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:34,237 | INFO     | [data] copytool_out thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:34,311 | INFO     | [monitor] cgroup control has ended
[2025-11-27 16:51:04] 2025-11-27 21:50:34,521 | INFO     | [job] validate thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:34,581 | INFO     | [payload] control thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:34,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 16:51:04] 2025-11-27 21:50:34,609 | INFO     | [data] copytool_in thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:34,613 | INFO     | [payload] validate_post thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:38,601 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 16:51:04] 2025-11-27 21:50:40,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675071838016)>', '<ExcThread(monitor, started 139674718811904)>']
[2025-11-27 16:51:04] 2025-11-27 21:50:45,716 | INFO     | all workflow threads have been joined
[2025-11-27 16:51:04] 2025-11-27 21:50:45,716 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 16:51:04] 2025-11-27 21:50:45,716 | INFO     | traces error code: 0
[2025-11-27 16:51:04] 2025-11-27 21:50:45,716 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 16:51:04] 2025-11-27 21:51:02,804 | INFO     | PID=210281 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 16:51:04] 2025-11-27 21:51:02,804 | INFO     | .. there are 111 such processes running
[2025-11-27 16:51:04] 2025-11-27 21:51:02,805 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 16:51:04] 2025-11-27 21:51:02,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 16:51:04] 2025-11-27 21:51:02,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 16:51:04] 2025-11-27 21:51:02,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 16:51:04] 2025-11-27 21:51:02,805 | INFO     | [monitor] control thread has ended
[2025-11-27 16:51:04] 2025-11-27 21:51:03,107 [wrapper] ==== pilot stdout END ====
[2025-11-27 16:51:04] 2025-11-27 21:51:03,151 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 16:51:04] 2025-11-27 21:51:03,173 [wrapper] pilotpid: 210281
[2025-11-27 16:51:04] 2025-11-27 21:51:03,179 [wrapper] Pilot exit status: 0
[2025-11-27 16:51:04] 2025-11-27 21:51:03,211 [wrapper] pandaids: 6898039435
[2025-11-27 16:51:04] 2025-11-27 21:51:03,383 [wrapper] cleanup supervisor_pilot  246845 210282
[2025-11-27 16:51:04] 2025-11-27 21:51:03,387 [wrapper] Test setup, not cleaning
[2025-11-27 16:51:04] 2025-11-27 21:51:03,421 [wrapper] apfmon messages muted
[2025-11-27 16:51:04] 2025-11-27 21:51:03,439 [wrapper] ==== wrapper stdout END ====
[2025-11-27 16:51:04] 2025-11-27 21:51:03,446 [wrapper] ==== wrapper stderr END ====
[2025-11-27 16:51:04]  *** Error codes and diagnostics ***
[2025-11-27 16:51:04]     "exeErrorCode": 0,
[2025-11-27 16:51:04]     "exeErrorDiag": "",
[2025-11-27 16:51:04]     "pilotErrorCode": 0,
[2025-11-27 16:51:04]     "pilotErrorDiag": "",
[2025-11-27 16:51:04]  *** Listing of results directory ***
[2025-11-27 16:51:04] total 1295300
[2025-11-27 16:51:04] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 21:38 pilot3.tar.gz
[2025-11-27 16:51:04] -rwx------. 1 boincer umatlas     36292 Nov 25 21:56 runpilot2-wrapper.sh
[2025-11-27 16:51:04] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:56 queuedata.json
[2025-11-27 16:51:04] -rw-r--r--. 1 boincer umatlas       100 Nov 27 08:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 16:51:04] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 08:50 run_atlas
[2025-11-27 16:51:04] -rw-r--r--. 1 boincer umatlas       105 Nov 27 08:50 job.xml
[2025-11-27 16:51:04] -rw-r--r--. 2 boincer umatlas 409044273 Nov 27 08:50 EVNT.47483658._002399.pool.root.1
[2025-11-27 16:51:04] -rw-r--r--. 2 boincer umatlas    590103 Nov 27 08:50 input.tar.gz
[2025-11-27 16:51:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 08:50 start_atlas.sh
[2025-11-27 16:51:04] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 08:50 shared
[2025-11-27 16:51:04] -rw-r--r--. 1 boincer umatlas         0 Nov 27 08:50 boinc_lockfile
[2025-11-27 16:51:04] -rw-r--r--. 1 boincer umatlas      2784 Nov 27 08:50 pandaJob.out
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas        57 Nov 27 08:50 setup.sh.local
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas    991588 Nov 27 08:51 agis_schedconf.cvmfs.json
[2025-11-27 16:51:04] drwx------. 5 boincer umatlas      4096 Nov 27 08:51 pilot3
[2025-11-27 16:51:04] -rw-r--r--. 1 boincer umatlas       533 Nov 27 16:34 boinc_task_state.xml
[2025-11-27 16:51:04] -rw-r--r--. 1 boincer umatlas      7172 Nov 27 16:46 init_data.xml
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas 903059031 Nov 27 16:48 HITS.47556161._003819.pool.root.1
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas      1052 Nov 27 16:49 memory_monitor_summary.json
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas   1516240 Nov 27 16:49 agis_ddmendpoints.agis.ALL.json
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas   1709520 Nov 27 16:49 log.47556161._003819.job.log.tgz.1
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas        95 Nov 27 16:50 pilot_heartbeat.json
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas      8593 Nov 27 16:50 heartbeat.json
[2025-11-27 16:51:04] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 16:51 boinc_mmap_file
[2025-11-27 16:51:04] -rw-r--r--. 1 boincer umatlas        29 Nov 27 16:51 wrapper_checkpoint.txt
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas       823 Nov 27 16:51 pilotlog.txt
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas   3469971 Nov 27 16:51 log.47556161._003819.job.log.1
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas       353 Nov 27 16:51 output.list
[2025-11-27 16:51:04] -rw-r--r--. 1 boincer umatlas       620 Nov 27 16:51 runtime_log
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas   5201920 Nov 27 16:51 result.tar.gz
[2025-11-27 16:51:04] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 16:51 runtime_log.err
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas       658 Nov 27 16:51 fWeLDmbsKi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvoJKDmYMidTm.diag
[2025-11-27 16:51:04] -rw-r--r--. 1 boincer umatlas     21371 Nov 27 16:51 stderr.txt
[2025-11-27 16:51:04] HITS file was successfully produced:
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas 903059031 Nov 27 16:48 shared/HITS.pool.root.1
[2025-11-27 16:51:04]  *** Contents of shared directory: ***
[2025-11-27 16:51:04] total 1287040
[2025-11-27 16:51:04] -rw-r--r--. 2 boincer umatlas 409044273 Nov 27 08:50 ATLAS.root_0
[2025-11-27 16:51:04] -rw-r--r--. 2 boincer umatlas    590103 Nov 27 08:50 input.tar.gz
[2025-11-27 16:51:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 08:50 start_atlas.sh
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas 903059031 Nov 27 16:48 HITS.pool.root.1
[2025-11-27 16:51:04] -rw-------. 1 boincer umatlas   5201920 Nov 27 16:51 result.tar.gz
16:51:06 (175438): run_atlas exited; CPU time 131951.585683
16:51:06 (175438): called boinc_finish(0)

</stderr_txt>
]]>

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