Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:09:03 (354091): wrapper (7.7.26015): starting
09:09:03 (354091): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 09:09:03] Arguments: --nthreads 8
[2025-11-27 09:09:03] Threads: 8
[2025-11-27 09:09:03] Checking for CVMFS
[2025-11-27 09:09:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 09:09:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 09:09:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 09:09:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 09:09:05] 2.13.3.0 9582 31569 245112 153366 2 707 20503763 40960000 66913 16776704 0 405792403 99.725 281054779 48508 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 09:09:05] CVMFS is ok
[2025-11-27 09:09:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 09:09:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 09:09:05] Further information can be found at the LHC@home message board.
[2025-11-27 09:09:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 09:09:05] Checking for apptainer binary...
[2025-11-27 09:09:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 09:09:05] Running /usr/bin/apptainer --version
[2025-11-27 09:09:05] apptainer version 1.4.4-1.el9
[2025-11-27 09:09:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 09:09:06] c8-7-4.aglt2.org
[2025-11-27 09:09:06] apptainer works
[2025-11-27 09:09:06] Set ATHENA_PROC_NUMBER=8
[2025-11-27 09:09:06] Set ATHENA_CORE_NUMBER=8
[2025-11-27 09:09:06] Starting ATLAS job with PandaID=6898377104
[2025-11-27 09:09:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:15:22]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:15:22] 2025-11-27 22:13:49,992 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:15:22] 2025-11-27 22:13:49,992 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:15:22] 2025-11-27 22:13:49,996 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:15:22] 2025-11-27 22:13:49,997 | INFO     | sum of square deviations: 33231814212.736984
[2025-11-27 17:15:22] 2025-11-27 22:13:50,000 | INFO     | sum of deviations: 209896134363.76862
[2025-11-27 17:15:22] 2025-11-27 22:13:50,000 | INFO     | mean x: 1764267126.694737
[2025-11-27 17:15:22] 2025-11-27 22:13:50,000 | INFO     | mean y: 2866257.667368421
[2025-11-27 17:15:22] 2025-11-27 22:13:50,000 | INFO     | intersect: -11140457050.163542
[2025-11-27 17:15:22] 2025-11-27 22:13:50,000 | INFO     | chi2: 9.926685679863201
[2025-11-27 17:15:22] 2025-11-27 22:13:50,001 | INFO     | sum of square deviations: 32193630950.723354
[2025-11-27 17:15:22] 2025-11-27 22:13:50,004 | INFO     | sum of deviations: 381183460736.72235
[2025-11-27 17:15:22] 2025-11-27 22:13:50,004 | INFO     | mean x: 1764266974.212766
[2025-11-27 17:15:22] 2025-11-27 22:13:50,004 | INFO     | mean y: 2891418.0127659575
[2025-11-27 17:15:22] 2025-11-27 22:13:50,004 | INFO     | intersect: -20886625266.92697
[2025-11-27 17:15:22] 2025-11-27 22:13:50,004 | INFO     | chi2: 6.156202230065899
[2025-11-27 17:15:22] 2025-11-27 22:13:50,004 | INFO     | current chi2=6.156202230065899 (change=37.98330652743366 %)
[2025-11-27 17:15:22] 2025-11-27 22:13:50,005 | INFO     | sum of square deviations: 31177308563.397793
[2025-11-27 17:15:22] 2025-11-27 22:13:50,007 | INFO     | sum of deviations: 528797623741.35504
[2025-11-27 17:15:22] 2025-11-27 22:13:50,008 | INFO     | mean x: 1764266821.7311828
[2025-11-27 17:15:22] 2025-11-27 22:13:50,008 | INFO     | mean y: 2913520.35483871
[2025-11-27 17:15:22] 2025-11-27 22:13:50,008 | INFO     | intersect: -29920776046.371758
[2025-11-27 17:15:22] 2025-11-27 22:13:50,008 | INFO     | chi2: 3.159414622833849
[2025-11-27 17:15:22] 2025-11-27 22:13:50,008 | INFO     | current chi2=3.159414622833849 (change=48.67916119773036 %)
[2025-11-27 17:15:22] 2025-11-27 22:13:50,009 | INFO     | sum of square deviations: 30182529644.73049
[2025-11-27 17:15:22] 2025-11-27 22:13:50,011 | INFO     | sum of deviations: 534484085320.1301
[2025-11-27 17:15:22] 2025-11-27 22:13:50,011 | INFO     | mean x: 1764266669.2434783
[2025-11-27 17:15:22] 2025-11-27 22:13:50,012 | INFO     | mean y: 2914372.7934782607
[2025-11-27 17:15:22] 2025-11-27 22:13:50,012 | INFO     | intersect: -31239412498.772263
[2025-11-27 17:15:22] 2025-11-27 22:13:50,012 | INFO     | chi2: 3.0487543556537675
[2025-11-27 17:15:22] 2025-11-27 22:13:50,012 | INFO     | current chi2=3.0487543556537675 (change=3.5025560235213518 %)
[2025-11-27 17:15:22] 2025-11-27 22:13:50,012 | INFO     | right removable region: 459
[2025-11-27 17:15:22] 2025-11-27 22:13:50,012 | INFO     | sum of square deviations: 32193168634.146824
[2025-11-27 17:15:22] 2025-11-27 22:13:50,015 | INFO     | sum of deviations: 63767687774.01014
[2025-11-27 17:15:22] 2025-11-27 22:13:50,015 | INFO     | mean x: 1764267279.2106383
[2025-11-27 17:15:22] 2025-11-27 22:13:50,015 | INFO     | mean y: 2887667.7978723403
[2025-11-27 17:15:22] 2025-11-27 22:13:50,016 | INFO     | intersect: -3491743329.5148864
[2025-11-27 17:15:22] 2025-11-27 22:13:50,016 | INFO     | chi2: 7.170751558187951
[2025-11-27 17:15:22] 2025-11-27 22:13:50,016 | INFO     | current chi2=7.170751558187951 (change=27.762882905276292 %)
[2025-11-27 17:15:22] 2025-11-27 22:13:50,016 | INFO     | sum of square deviations: 31176498740.094658
[2025-11-27 17:15:22] 2025-11-27 22:13:50,019 | INFO     | sum of deviations: 31145193378.845154
[2025-11-27 17:15:22] 2025-11-27 22:13:50,019 | INFO     | mean x: 1764267431.7182796
[2025-11-27 17:15:22] 2025-11-27 22:13:50,019 | INFO     | mean y: 2892556.006451613
[2025-11-27 17:15:22] 2025-11-27 22:13:50,019 | INFO     | intersect: -1759603315.9946477
[2025-11-27 17:15:22] 2025-11-27 22:13:50,020 | INFO     | chi2: 7.089246259597428
[2025-11-27 17:15:22] 2025-11-27 22:13:50,020 | INFO     | current chi2=7.089246259597428 (change=1.1366353711900081 %)
[2025-11-27 17:15:22] 2025-11-27 22:13:50,020 | INFO     | left removable region: 20
[2025-11-27 17:15:22] 2025-11-27 22:13:50,020 | INFO     | sum of square deviations: 26234176940.719795
[2025-11-27 17:15:22] 2025-11-27 22:13:50,023 | INFO     | sum of deviations: 308439907044.81354
[2025-11-27 17:15:22] 2025-11-27 22:13:50,023 | INFO     | mean x: 1764267248.7904327
[2025-11-27 17:15:22] 2025-11-27 22:13:50,023 | INFO     | mean y: 2949739.193621868
[2025-11-27 17:15:22] 2025-11-27 22:13:50,023 | INFO     | intersect: -20739855626.828255
[2025-11-27 17:15:22] 2025-11-27 22:13:50,023 | INFO     | chi2: 0.06517029443468342
[2025-11-27 17:15:22] 2025-11-27 22:13:50,023 | INFO     | current memory leak: 11.76 B/s (using 439 data points, chi2=0.07)
[2025-11-27 17:15:22] 2025-11-27 22:13:50,024 | INFO     | could have reported an average CPU frequency of 3799 MHz (19 samples)
[2025-11-27 17:15:22] 2025-11-27 22:13:50,024 | INFO     | ..............................
[2025-11-27 17:15:22] 2025-11-27 22:13:50,024 | INFO     | . Timing measurements:
[2025-11-27 17:15:22] 2025-11-27 22:13:50,024 | INFO     | . get job = 0 s
[2025-11-27 17:15:22] 2025-11-27 22:13:50,024 | INFO     | . initial setup = 4 s
[2025-11-27 17:15:22] 2025-11-27 22:13:50,024 | INFO     | . payload setup = 19 s
[2025-11-27 17:15:22] 2025-11-27 22:13:50,024 | INFO     | . stage-in = 0 s
[2025-11-27 17:15:22] 2025-11-27 22:13:50,024 | INFO     | . payload execution = 28937 s
[2025-11-27 17:15:22] 2025-11-27 22:13:50,024 | INFO     | . stage-out = 5 s
[2025-11-27 17:15:22] 2025-11-27 22:13:50,024 | INFO     | . log creation = 1 s
[2025-11-27 17:15:22] 2025-11-27 22:13:50,024 | INFO     | ..............................
[2025-11-27 17:15:22] 2025-11-27 22:13:50,341 | INFO     | 
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | job summary report
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | --------------------------------------------------
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | PanDA job id: 6898377104
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | task id: 47556161
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | errors: (none)
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | pilot state: finished 
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | transexitcode: 0
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | exeerrorcode: 0
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | exeerrordiag: 
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | exitcode: 0
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | exitmsg: OK
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | cpuconsumptiontime: 135398 s
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | nevents: 1000
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | neventsw: 0
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | pid: 391033
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | pgrp: 391033
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | corecount: 8
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | event service: False
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | sizes: {0: 2284314, 11: 2284314, 20: 2284604, 22: 2284632, 28962: 2322396, 28967: 2331574, 28998: 2331764}
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | --------------------------------------------------
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | 
[2025-11-27 17:15:22] 2025-11-27 22:13:50,342 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 17:15:22] 2025-11-27 22:13:50,420 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,420 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,420 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,420 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,420 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,420 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,420 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,420 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,421 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,421 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,421 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,421 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:15:22] 2025-11-27 22:13:50,421 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,421 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:15:22] 2025-11-27 22:13:50,421 | INFO     | job 6898377104 has completed (purged errors)
[2025-11-27 17:15:22] 2025-11-27 22:13:50,421 | INFO     | overall cleanup function is called
[2025-11-27 17:15:22] 2025-11-27 22:13:51,452 | INFO     | --- collectZombieJob: --- 10, [391033]
[2025-11-27 17:15:22] 2025-11-27 22:13:51,453 | INFO     | zombie collector waiting for pid 391033
[2025-11-27 17:15:22] 2025-11-27 22:13:51,453 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:15:22] 2025-11-27 22:13:51,453 | INFO     | collected zombie processes
[2025-11-27 17:15:22] 2025-11-27 22:13:51,453 | INFO     | will attempt to kill all subprocesses of pid=391033
[2025-11-27 17:15:22] 2025-11-27 22:13:53,458 | INFO     | process IDs to be killed: [391033] (in reverse order)
[2025-11-27 17:15:22] 2025-11-27 22:13:54,077 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:15:22] 2025-11-27 22:13:54,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:15:22] 2025-11-27 22:13:54,180 | INFO     | did not find any defunct processes belonging to 391033
[2025-11-27 17:15:22] 2025-11-27 22:13:54,295 | INFO     | did not find any defunct processes belonging to 391033
[2025-11-27 17:15:22] 2025-11-27 22:13:54,308 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:15:22] 2025-11-27 22:13:54,308 | INFO     | ready for new job
[2025-11-27 17:15:22] 2025-11-27 22:13:54,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:15:22] 2025-11-27 22:13:54,311 | INFO     | ***************************************
[2025-11-27 17:15:22] 2025-11-27 22:13:54,311 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:15:22] 2025-11-27 22:13:54,311 | INFO     | ***************************************
[2025-11-27 17:15:22] 2025-11-27 22:13:54,311 | INFO     | 
[2025-11-27 17:15:22] 2025-11-27 22:13:54,316 | INFO     | architecture information:
[2025-11-27 17:15:22] 2025-11-27 22:13:54,316 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:15:22] 2025-11-27 22:13:54,340 | INFO     | cat /etc/os-release:
[2025-11-27 17:15:22] NAME="CentOS Linux"
[2025-11-27 17:15:22] VERSION="7 (Core)"
[2025-11-27 17:15:22] ID="centos"
[2025-11-27 17:15:22] ID_LIKE="rhel fedora"
[2025-11-27 17:15:22] VERSION_ID="7"
[2025-11-27 17:15:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:15:22] ANSI_COLOR="0;31"
[2025-11-27 17:15:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:15:22] HOME_URL="https://www.centos.org/"
[2025-11-27 17:15:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:15:22] 
[2025-11-27 17:15:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:15:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:15:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:15:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:15:22] 
[2025-11-27 17:15:22] 2025-11-27 22:13:54,341 | INFO     | ***************************************
[2025-11-27 17:15:22] 2025-11-27 22:13:54,844 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 17:15:22] 2025-11-27 22:13:54,878 | INFO     | sufficient remaining disk space (160828489728 B)
[2025-11-27 17:15:22] 2025-11-27 22:13:54,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:15:22] 2025-11-27 22:13:54,878 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:15:22] 2025-11-27 22:13:54,878 | INFO     | update_server=False
[2025-11-27 17:15:22] 2025-11-27 22:13:54,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:15:22] 2025-11-27 22:13:54,879 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:15:22] 2025-11-27 22:13:54,880 | INFO     | aborting loop
[2025-11-27 17:15:22] 2025-11-27 22:13:54,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:15:22] 2025-11-27 22:13:55,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:15:22] 2025-11-27 22:13:55,591 | INFO     | all job control threads have been joined
[2025-11-27 17:15:22] 2025-11-27 22:13:55,762 | INFO     | all data control threads have been joined
[2025-11-27 17:15:22] 2025-11-27 22:13:55,883 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:13:55,887 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:13:55,928 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:13:56,127 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:13:56,323 | INFO     | all payload control threads have been joined
[2025-11-27 17:15:22] 2025-11-27 22:13:56,426 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:13:56,536 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:13:56,584 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:13:56,596 | INFO     | [job] control thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:13:56,768 | INFO     | [data] control thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:13:56,810 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:13:56,823 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:13:56,824 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:13:56,887 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:13:56,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:15:22] 2025-11-27 22:13:57,113 | INFO     | [job] validate thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:13:57,329 | INFO     | [payload] control thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:14:00,897 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:15:22] 2025-11-27 22:14:25,260 | INFO     | PID=366378 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 17:15:22] 2025-11-27 22:14:25,267 | INFO     | .. there are 99 such processes running
[2025-11-27 17:15:22] 2025-11-27 22:14:25,268 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:15:22] 2025-11-27 22:14:25,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:15:22] 2025-11-27 22:14:25,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:15:22] 2025-11-27 22:14:46,029 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:15:22] 2025-11-27 22:14:46,849 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140118399207232)>', '<ExcThread(monitor, started 140117905749760)>']
[2025-11-27 17:15:22] 2025-11-27 22:14:47,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:15:22] 2025-11-27 22:14:47,426 | INFO     | [monitor] control thread has ended
[2025-11-27 17:15:22] 2025-11-27 22:14:51,875 | INFO     | all workflow threads have been joined
[2025-11-27 17:15:22] 2025-11-27 22:14:51,876 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:15:22] 2025-11-27 22:14:51,876 | INFO     | traces error code: 0
[2025-11-27 17:15:22] 2025-11-27 22:14:51,876 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:15:22] 2025-11-27 22:14:52,840 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:15:22] 2025-11-27 22:14:52,852 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:15:22] 2025-11-27 22:14:52,895 [wrapper] pilotpid: 366378
[2025-11-27 17:15:22] 2025-11-27 22:14:52,917 [wrapper] Pilot exit status: 0
[2025-11-27 17:15:22] 2025-11-27 22:14:52,938 [wrapper] pandaids: 6898377104
[2025-11-27 17:15:22] 2025-11-27 22:14:53,219 [wrapper] cleanup supervisor_pilot  309370 366379
[2025-11-27 17:15:22] 2025-11-27 22:14:53,249 [wrapper] Test setup, not cleaning
[2025-11-27 17:15:22] 2025-11-27 22:14:53,260 [wrapper] apfmon messages muted
[2025-11-27 17:15:22] 2025-11-27 22:14:53,282 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:15:22] 2025-11-27 22:14:53,297 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:15:22]  *** Error codes and diagnostics ***
[2025-11-27 17:15:22]     "exeErrorCode": 0,
[2025-11-27 17:15:22]     "exeErrorDiag": "",
[2025-11-27 17:15:22]     "pilotErrorCode": 0,
[2025-11-27 17:15:22]     "pilotErrorDiag": "",
[2025-11-27 17:15:22]  *** Listing of results directory ***
[2025-11-27 17:15:22] total 1322040
[2025-11-27 17:15:22] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:12 queuedata.json
[2025-11-27 17:15:22] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-27 17:15:22] -rwx------. 1 boincer umatlas     36292 Nov 26 11:14 runpilot2-wrapper.sh
[2025-11-27 17:15:22] -rw-r--r--. 1 boincer umatlas       100 Nov 27 09:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:15:22] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 09:09 run_atlas
[2025-11-27 17:15:22] -rw-r--r--. 1 boincer umatlas       105 Nov 27 09:09 job.xml
[2025-11-27 17:15:22] -rw-r--r--. 2 boincer umatlas 411152397 Nov 27 09:09 EVNT.47483658._002569.pool.root.1
[2025-11-27 17:15:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 09:09 start_atlas.sh
[2025-11-27 17:15:22] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 09:09 shared
[2025-11-27 17:15:22] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 09:09 input.tar.gz
[2025-11-27 17:15:22] -rw-r--r--. 1 boincer umatlas         0 Nov 27 09:09 boinc_lockfile
[2025-11-27 17:15:22] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 09:09 pandaJob.out
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas        57 Nov 27 09:09 setup.sh.local
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas    991588 Nov 27 09:09 agis_schedconf.cvmfs.json
[2025-11-27 17:15:22] drwx------. 5 boincer umatlas      4096 Nov 27 09:09 pilot3
[2025-11-27 17:15:22] -rw-r--r--. 1 boincer umatlas       533 Nov 27 17:01 boinc_task_state.xml
[2025-11-27 17:15:22] -rw-r--r--. 1 boincer umatlas      7173 Nov 27 17:09 init_data.xml
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas 928157785 Nov 27 17:12 HITS.47556161._005519.pool.root.1
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas      1065 Nov 27 17:13 memory_monitor_summary.json
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas   1516240 Nov 27 17:13 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas   1726254 Nov 27 17:13 log.47556161._005519.job.log.tgz.1
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas      8580 Nov 27 17:13 heartbeat.json
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas        95 Nov 27 17:14 pilot_heartbeat.json
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas      4824 Nov 27 17:14 pilotlog.txt
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas   3541097 Nov 27 17:14 log.47556161._005519.job.log.1
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas       353 Nov 27 17:14 output.list
[2025-11-27 17:15:22] -rw-r--r--. 1 boincer umatlas       620 Nov 27 17:14 runtime_log
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas   5283840 Nov 27 17:14 result.tar.gz
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas       657 Nov 27 17:14 sEdKDmyKXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm37MKDmg3XfEm.diag
[2025-11-27 17:15:22] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 17:14 runtime_log.err
[2025-11-27 17:15:22] -rw-r--r--. 1 boincer umatlas        29 Nov 27 17:15 wrapper_checkpoint.txt
[2025-11-27 17:15:22] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 17:15 boinc_mmap_file
[2025-11-27 17:15:22] -rw-r--r--. 1 boincer umatlas     21112 Nov 27 17:15 stderr.txt
[2025-11-27 17:15:22] HITS file was successfully produced:
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas 928157785 Nov 27 17:12 shared/HITS.pool.root.1
[2025-11-27 17:15:22]  *** Contents of shared directory: ***
[2025-11-27 17:15:22] total 1313692
[2025-11-27 17:15:22] -rw-r--r--. 2 boincer umatlas 411152397 Nov 27 09:09 ATLAS.root_0
[2025-11-27 17:15:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 09:09 start_atlas.sh
[2025-11-27 17:15:22] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 09:09 input.tar.gz
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas 928157785 Nov 27 17:12 HITS.pool.root.1
[2025-11-27 17:15:22] -rw-------. 1 boincer umatlas   5283840 Nov 27 17:14 result.tar.gz
17:15:24 (354091): run_atlas exited; CPU time 135914.598086
17:15:24 (354091): called boinc_finish(0)

</stderr_txt>
]]>

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