Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:34:45 (2334374): wrapper (7.7.26015): starting
17:34:45 (2334374): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 17:34:46] Arguments: --nthreads 8
[2025-11-27 17:34:46] Threads: 8
[2025-11-27 17:34:46] Checking for CVMFS
[2025-11-27 17:34:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 17:34:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 17:34:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 17:34:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 17:34:48] 2.13.3.0 44796 31955 371788 153387 0 592 25056674 32947200 32831 16776704 0 128264563 99.464 179532795 35495 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 17:34:48] CVMFS is ok
[2025-11-27 17:34:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 17:34:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 17:34:48] Further information can be found at the LHC@home message board.
[2025-11-27 17:34:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 17:34:48] Checking for apptainer binary...
[2025-11-27 17:34:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 17:34:48] Running /usr/bin/apptainer --version
[2025-11-27 17:34:48] apptainer version 1.4.4-1.el9
[2025-11-27 17:34:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 17:34:49] c6-6-8-2.aglt2.org
[2025-11-27 17:34:49] apptainer works
[2025-11-27 17:34:49] Set ATHENA_PROC_NUMBER=8
[2025-11-27 17:34:49] Set ATHENA_CORE_NUMBER=8
[2025-11-27 17:34:49] Starting ATLAS job with PandaID=6898362916
[2025-11-27 17:34:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:40:15 (2334374): BOINC client no longer exists - exiting
17:40:15 (2334374): timer handler: client dead, exiting
17:48:26 (2492508): wrapper (7.7.26015): starting
17:48:26 (2492508): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 17:48:26] Arguments: --nthreads 8
[2025-11-27 17:48:26] Threads: 8
[2025-11-27 17:48:26] This job has been restarted, cleaning up previous attempt
[2025-11-27 17:48:26] Checking for CVMFS
[2025-11-27 17:48:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 17:48:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 17:48:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 17:48:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 17:48:26] 2.13.3.0 44796 31969 385264 153387 3 804 25459317 32947201 29418 16776704 0 128528432 99.465 179636047 35485 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 17:48:26] CVMFS is ok
[2025-11-27 17:48:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 17:48:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 17:48:26] Further information can be found at the LHC@home message board.
[2025-11-27 17:48:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 17:48:26] Checking for apptainer binary...
[2025-11-27 17:48:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 17:48:26] Running /usr/bin/apptainer --version
[2025-11-27 17:48:26] apptainer version 1.4.4-1.el9
[2025-11-27 17:48:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 17:48:27] c6-6-8-2.aglt2.org
[2025-11-27 17:48:27] apptainer works
[2025-11-27 17:48:27] Set ATHENA_PROC_NUMBER=8
[2025-11-27 17:48:27] Set ATHENA_CORE_NUMBER=8
[2025-11-27 17:48:27] Starting ATLAS job with PandaID=6898362916
[2025-11-27 17:48:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 13:02:52]  *** The last 200 lines of the pilot log: ***
[2025-11-28 13:02:52] 2025-11-28 18:01:43,212 | INFO     | 69182s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-28 13:02:52] 2025-11-28 18:01:43,880 | INFO     | monitor loop #3944: job 0:6898362916 is in state 'finished'
[2025-11-28 13:02:52] 2025-11-28 18:01:43,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 13:02:52] 2025-11-28 18:01:45,219 | INFO     | time since job start (69183s) is within the limit (172800.0s)
[2025-11-28 13:02:52] 2025-11-28 18:01:46,393 | INFO     | monitor loop #3945: job 0:6898362916 is in state 'finished'
[2025-11-28 13:02:52] 2025-11-28 18:01:46,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 13:02:52] 2025-11-28 18:01:47,226 | INFO     | time since job start (69185s) is within the limit (172800.0s)
[2025-11-28 13:02:52] 2025-11-28 18:01:48,903 | INFO     | monitor loop #3946: job 0:6898362916 is in state 'finished'
[2025-11-28 13:02:52] 2025-11-28 18:01:48,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 13:02:52] 2025-11-28 18:01:49,234 | INFO     | time since job start (69187s) is within the limit (172800.0s)
[2025-11-28 13:02:52] 2025-11-28 18:01:51,241 | INFO     | time since job start (69189s) is within the limit (172800.0s)
[2025-11-28 13:02:52] 2025-11-28 18:01:51,414 | INFO     | monitor loop #3947: job 0:6898362916 is in state 'finished'
[2025-11-28 13:02:52] 2025-11-28 18:01:51,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 13:02:52] 2025-11-28 18:01:53,251 | INFO     | time since job start (69191s) is within the limit (172800.0s)
[2025-11-28 13:02:52] 2025-11-28 18:01:53,950 | INFO     | monitor loop #3948: job 0:6898362916 is in state 'finished'
[2025-11-28 13:02:52] 2025-11-28 18:01:53,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 13:02:52] 2025-11-28 18:01:54,285 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 13:02:52] 2025-11-28 18:01:54,336 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2553.1137395833334
[2025-11-28 13:02:52] 2025-11-28 18:01:54,404 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6898362916/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 13:02:52] 2025-11-28 18:01:54,405 | INFO     | extracted standard info from prmon json
[2025-11-28 13:02:52] 2025-11-28 18:01:54,405 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 13:02:52] 2025-11-28 18:01:54,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 13:02:52] 2025-11-28 18:01:54,463 | INFO     | fitting pss+swap vs Time
[2025-11-28 13:02:52] 2025-11-28 18:01:54,474 | INFO     | sum of square deviations: 451007907303.1527
[2025-11-28 13:02:52] 2025-11-28 18:01:54,630 | INFO     | sum of deviations: 1472247790511.9924
[2025-11-28 13:02:52] 2025-11-28 18:01:54,630 | INFO     | mean x: 1764318290.2180052
[2025-11-28 13:02:52] 2025-11-28 18:01:54,630 | INFO     | mean y: 2885633.9514563107
[2025-11-28 13:02:52] 2025-11-28 18:01:54,630 | INFO     | intersect: -5756467278.651451
[2025-11-28 13:02:52] 2025-11-28 18:01:54,632 | INFO     | chi2: 12.574127171683564
[2025-11-28 13:02:52] 2025-11-28 18:01:54,664 | INFO     | sum of square deviations: 445064227403.44574
[2025-11-28 13:02:52] 2025-11-28 18:01:54,872 | INFO     | sum of deviations: 1840606478589.604
[2025-11-28 13:02:52] 2025-11-28 18:01:54,891 | INFO     | mean x: 1764318137.7278368
[2025-11-28 13:02:52] 2025-11-28 18:01:54,892 | INFO     | mean y: 2895082.624113475
[2025-11-28 13:02:52] 2025-11-28 18:01:54,892 | INFO     | intersect: -7293614487.558116
[2025-11-28 13:02:52] 2025-11-28 18:01:54,894 | INFO     | chi2: 9.539939243307819
[2025-11-28 13:02:52] 2025-11-28 18:01:54,894 | INFO     | current chi2=9.539939243307819 (change=24.130405927567015 %)
[2025-11-28 13:02:52] 2025-11-28 18:01:54,894 | INFO     | right removable region: 1127
[2025-11-28 13:02:52] 2025-11-28 18:01:54,948 | INFO     | sum of square deviations: 445062763345.9009
[2025-11-28 13:02:52] 2025-11-28 18:01:55,227 | INFO     | sum of deviations: 1143047960786.4875
[2025-11-28 13:02:52] 2025-11-28 18:01:55,227 | INFO     | mean x: 1764318442.7269504
[2025-11-28 13:02:52] 2025-11-28 18:01:55,228 | INFO     | mean y: 2894070.345744681
[2025-11-28 13:02:52] 2025-11-28 18:01:55,228 | INFO     | intersect: -4528378289.929564
[2025-11-28 13:02:52] 2025-11-28 18:01:55,229 | INFO     | chi2: 10.144857075043376
[2025-11-28 13:02:52] 2025-11-28 18:01:55,274 | INFO     | current chi2=10.144857075043376 (change=19.31959223468654 %)
[2025-11-28 13:02:52] 2025-11-28 18:01:55,274 | INFO     | left removable region: 10
[2025-11-28 13:02:52] 2025-11-28 18:01:55,276 | INFO     | sum of square deviations: 432170240929.17786
[2025-11-28 13:02:52] 2025-11-28 18:01:55,274 | INFO     | time since job start (69193s) is within the limit (172800.0s)
[2025-11-28 13:02:52] 2025-11-28 18:01:55,467 | INFO     | sum of deviations: 1475275158679.9624
[2025-11-28 13:02:52] 2025-11-28 18:01:55,468 | INFO     | mean x: 1764318412.2390332
[2025-11-28 13:02:52] 2025-11-28 18:01:55,468 | INFO     | mean y: 2908190.812891674
[2025-11-28 13:02:52] 2025-11-28 18:01:55,468 | INFO     | intersect: -6019845990.46
[2025-11-28 13:02:52] 2025-11-28 18:01:55,506 | INFO     | chi2: 6.404845574020463
[2025-11-28 13:02:52] 2025-11-28 18:01:55,506 | INFO     | current memory leak: 3.41 B/s (using 1117 data points, chi2=6.40)
[2025-11-28 13:02:52] 2025-11-28 18:01:55,508 | INFO     | could have reported an average CPU frequency of 2567 MHz (41 samples)
[2025-11-28 13:02:52] 2025-11-28 18:01:55,508 | INFO     | ..............................
[2025-11-28 13:02:52] 2025-11-28 18:01:55,508 | INFO     | . Timing measurements:
[2025-11-28 13:02:52] 2025-11-28 18:01:55,508 | INFO     | . get job = 0 s
[2025-11-28 13:02:52] 2025-11-28 18:01:55,529 | INFO     | . initial setup = 1 s
[2025-11-28 13:02:52] 2025-11-28 18:01:55,529 | INFO     | . payload setup = 9 s
[2025-11-28 13:02:52] 2025-11-28 18:01:55,529 | INFO     | . stage-in = 0 s
[2025-11-28 13:02:52] 2025-11-28 18:01:55,529 | INFO     | . payload execution = 69103 s
[2025-11-28 13:02:52] 2025-11-28 18:01:55,529 | INFO     | . stage-out = 9 s
[2025-11-28 13:02:52] 2025-11-28 18:01:55,529 | INFO     | . log creation = 3 s
[2025-11-28 13:02:52] 2025-11-28 18:01:55,529 | INFO     | ..............................
[2025-11-28 13:02:52] 2025-11-28 18:01:56,042 | INFO     | 
[2025-11-28 13:02:52] 2025-11-28 18:01:56,042 | INFO     | job summary report
[2025-11-28 13:02:52] 2025-11-28 18:01:56,042 | INFO     | --------------------------------------------------
[2025-11-28 13:02:52] 2025-11-28 18:01:56,042 | INFO     | PanDA job id: 6898362916
[2025-11-28 13:02:52] 2025-11-28 18:01:56,042 | INFO     | task id: 47556173
[2025-11-28 13:02:52] 2025-11-28 18:01:56,042 | INFO     | errors: (none)
[2025-11-28 13:02:52] 2025-11-28 18:01:56,042 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 13:02:52] 2025-11-28 18:01:56,042 | INFO     | pilot state: finished 
[2025-11-28 13:02:52] 2025-11-28 18:01:56,042 | INFO     | transexitcode: 0
[2025-11-28 13:02:52] 2025-11-28 18:01:56,042 | INFO     | exeerrorcode: 0
[2025-11-28 13:02:52] 2025-11-28 18:01:56,042 | INFO     | exeerrordiag: 
[2025-11-28 13:02:52] 2025-11-28 18:01:56,043 | INFO     | exitcode: 0
[2025-11-28 13:02:52] 2025-11-28 18:01:56,043 | INFO     | exitmsg: OK
[2025-11-28 13:02:52] 2025-11-28 18:01:56,043 | INFO     | cpuconsumptiontime: 266568 s
[2025-11-28 13:02:52] 2025-11-28 18:01:56,043 | INFO     | nevents: 1000
[2025-11-28 13:02:52] 2025-11-28 18:01:56,043 | INFO     | neventsw: 0
[2025-11-28 13:02:52] 2025-11-28 18:01:56,043 | INFO     | pid: 2564490
[2025-11-28 13:02:52] 2025-11-28 18:01:56,043 | INFO     | pgrp: 2564490
[2025-11-28 13:02:52] 2025-11-28 18:01:56,043 | INFO     | corecount: 8
[2025-11-28 13:02:52] 2025-11-28 18:01:56,043 | INFO     | event service: False
[2025-11-28 13:02:52] 2025-11-28 18:01:56,043 | INFO     | sizes: {0: 2284144, 1: 2284343, 7: 2284605, 12: 2284633, 69117: 2340492, 69118: 2340491, 69128: 2349669, 69130: 2349725, 69176: 2350067}
[2025-11-28 13:02:52] 2025-11-28 18:01:56,043 | INFO     | --------------------------------------------------
[2025-11-28 13:02:52] 2025-11-28 18:01:56,043 | INFO     | 
[2025-11-28 13:02:52] 2025-11-28 18:01:56,043 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-28 13:02:52] 2025-11-28 18:01:56,249 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,249 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,249 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,249 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,249 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,249 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,249 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,250 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,250 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,250 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,250 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,250 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,250 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,250 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,250 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,250 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,251 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 13:02:52] 2025-11-28 18:01:56,251 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,251 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 13:02:52] 2025-11-28 18:01:56,251 | INFO     | job 6898362916 has completed (purged errors)
[2025-11-28 13:02:52] 2025-11-28 18:01:56,251 | INFO     | overall cleanup function is called
[2025-11-28 13:02:52] 2025-11-28 18:01:57,308 | INFO     | --- collectZombieJob: --- 10, [2564490]
[2025-11-28 13:02:52] 2025-11-28 18:01:57,309 | INFO     | zombie collector waiting for pid 2564490
[2025-11-28 13:02:52] 2025-11-28 18:01:57,309 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 13:02:52] 2025-11-28 18:01:57,309 | INFO     | collected zombie processes
[2025-11-28 13:02:52] 2025-11-28 18:01:57,309 | INFO     | will attempt to kill all subprocesses of pid=2564490
[2025-11-28 13:02:52] 2025-11-28 18:01:59,955 | INFO     | process IDs to be killed: [2564490] (in reverse order)
[2025-11-28 13:02:52] 2025-11-28 18:02:01,336 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 13:02:52] 2025-11-28 18:02:01,336 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 13:02:52] 2025-11-28 18:02:01,452 | INFO     | did not find any defunct processes belonging to 2564490
[2025-11-28 13:02:52] 2025-11-28 18:02:01,606 | INFO     | did not find any defunct processes belonging to 2564490
[2025-11-28 13:02:52] 2025-11-28 18:02:01,643 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 13:02:52] 2025-11-28 18:02:01,643 | INFO     | ready for new job
[2025-11-28 13:02:52] 2025-11-28 18:02:01,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 13:02:52] 2025-11-28 18:02:01,655 | INFO     | ***************************************
[2025-11-28 13:02:52] 2025-11-28 18:02:01,656 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 13:02:52] 2025-11-28 18:02:01,656 | INFO     | ***************************************
[2025-11-28 13:02:52] 2025-11-28 18:02:01,656 | INFO     | 
[2025-11-28 13:02:52] 2025-11-28 18:02:01,704 | INFO     | architecture information:
[2025-11-28 13:02:52] 2025-11-28 18:02:01,712 | INFO     | executing command: cat /etc/os-release
[2025-11-28 13:02:52] 2025-11-28 18:02:01,815 | INFO     | cat /etc/os-release:
[2025-11-28 13:02:52] NAME="CentOS Linux"
[2025-11-28 13:02:52] VERSION="7 (Core)"
[2025-11-28 13:02:52] ID="centos"
[2025-11-28 13:02:52] ID_LIKE="rhel fedora"
[2025-11-28 13:02:52] VERSION_ID="7"
[2025-11-28 13:02:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 13:02:52] ANSI_COLOR="0;31"
[2025-11-28 13:02:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 13:02:52] HOME_URL="https://www.centos.org/"
[2025-11-28 13:02:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 13:02:52] 
[2025-11-28 13:02:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 13:02:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 13:02:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 13:02:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 13:02:52] 
[2025-11-28 13:02:52] 2025-11-28 18:02:01,815 | INFO     | ***************************************
[2025-11-28 13:02:52] 2025-11-28 18:02:02,323 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-28 13:02:52] 2025-11-28 18:02:02,385 | INFO     | sufficient remaining disk space (69508005888 B)
[2025-11-28 13:02:52] 2025-11-28 18:02:02,385 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 13:02:52] 2025-11-28 18:02:02,386 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 13:02:52] 2025-11-28 18:02:02,386 | INFO     | update_server=False
[2025-11-28 13:02:52] 2025-11-28 18:02:02,386 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 13:02:52] 2025-11-28 18:02:02,386 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 13:02:52] 2025-11-28 18:02:02,388 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 13:02:52] 2025-11-28 18:02:02,593 | INFO     | all data control threads have been joined
[2025-11-28 13:02:52] 2025-11-28 18:02:02,604 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 13:02:52] 2025-11-28 18:02:02,605 | INFO     | aborting loop
[2025-11-28 13:02:52] 2025-11-28 18:02:02,992 | INFO     | all payload control threads have been joined
[2025-11-28 13:02:52] 2025-11-28 18:02:03,015 | INFO     | all job control threads have been joined
[2025-11-28 13:02:52] 2025-11-28 18:02:03,408 | INFO     | [job] retrieve thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:03,529 | INFO     | [job] validate thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:03,586 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:03,601 | INFO     | [data] control thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:03,611 | INFO     | [job] job monitor thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:03,760 | INFO     | [payload] failed_post thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:04,001 | INFO     | [payload] control thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:04,022 | INFO     | [job] control thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:04,191 | INFO     | [data] copytool_in thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:04,280 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:04,397 | INFO     | [data] copytool_out thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:04,485 | INFO     | [payload] validate_post thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:04,702 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:04,860 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:05,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 13:02:52] 2025-11-28 18:02:06,169 | INFO     | [job] queue monitor thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:06,399 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 13:02:52] 2025-11-28 18:02:32,488 | INFO     | PID=2518051 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 13:02:52] 2025-11-28 18:02:32,500 | INFO     | .. there are 44 such processes running
[2025-11-28 13:02:52] 2025-11-28 18:02:32,501 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 13:02:52] 2025-11-28 18:02:32,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 13:02:52] 2025-11-28 18:02:32,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 13:02:52] 2025-11-28 18:02:45,529 | INFO     | [monitor] cgroup control has ended
[2025-11-28 13:02:52] 2025-11-28 18:02:45,844 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140099992172352)>', '<ExcThread(monitor, started 140099643746048)>']
[2025-11-28 13:02:52] 2025-11-28 18:02:46,582 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 13:02:52] 2025-11-28 18:02:46,583 | INFO     | [monitor] control thread has ended
[2025-11-28 13:02:52] 2025-11-28 18:02:50,872 | INFO     | all workflow threads have been joined
[2025-11-28 13:02:52] 2025-11-28 18:02:50,873 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 13:02:52] 2025-11-28 18:02:50,873 | INFO     | traces error code: 0
[2025-11-28 13:02:52] 2025-11-28 18:02:50,873 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 13:02:52] 2025-11-28 18:02:51,611 [wrapper] ==== pilot stdout END ====
[2025-11-28 13:02:52] 2025-11-28 18:02:51,629 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 13:02:52] 2025-11-28 18:02:51,649 [wrapper] pilotpid: 2518051
[2025-11-28 13:02:52] 2025-11-28 18:02:51,708 [wrapper] Pilot exit status: 0
[2025-11-28 13:02:52] 2025-11-28 18:02:51,835 [wrapper] pandaids: 6898362916 6898362916
[2025-11-28 13:02:52] 2025-11-28 18:02:52,083 [wrapper] cleanup supervisor_pilot 2175068 2518052
[2025-11-28 13:02:52] 2025-11-28 18:02:52,102 [wrapper] Test setup, not cleaning
[2025-11-28 13:02:52] 2025-11-28 18:02:52,127 [wrapper] apfmon messages muted
[2025-11-28 13:02:52] 2025-11-28 18:02:52,155 [wrapper] ==== wrapper stdout END ====
[2025-11-28 13:02:52] 2025-11-28 18:02:52,163 [wrapper] ==== wrapper stderr END ====
[2025-11-28 13:02:52]  *** Error codes and diagnostics ***
[2025-11-28 13:02:52]     "exeErrorCode": 0,
[2025-11-28 13:02:52]     "exeErrorDiag": "",
[2025-11-28 13:02:52]     "pilotErrorCode": 0,
[2025-11-28 13:02:52]     "pilotErrorDiag": "",
[2025-11-28 13:02:52]  *** Listing of results directory ***
[2025-11-28 13:02:52] total 1725940
[2025-11-28 13:02:52] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-28 13:02:52] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 10:45 pilot3.tar.gz
[2025-11-28 13:02:52] -rwx------ 1 boincer umatlas     36292 Nov 26 10:51 runpilot2-wrapper.sh
[2025-11-28 13:02:52] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 10:51 queuedata.json
[2025-11-28 13:02:52] -rw-r--r-- 1 boincer umatlas       100 Nov 27 17:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 13:02:52] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 17:34 run_atlas
[2025-11-28 13:02:52] -rw-r--r-- 1 boincer umatlas       105 Nov 27 17:34 job.xml
[2025-11-28 13:02:52] -rw-r--r-- 3 boincer umatlas 410669919 Nov 27 17:34 EVNT.47483658._003197.pool.root.1
[2025-11-28 13:02:52] -rw-r--r-- 3 boincer umatlas 410669919 Nov 27 17:34 ATLAS.root_0
[2025-11-28 13:02:52] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 17:34 start_atlas.sh
[2025-11-28 13:02:52] drwxrwx--x 2 boincer umatlas      4096 Nov 27 17:34 shared
[2025-11-28 13:02:52] -rw-r--r-- 2 boincer umatlas    590106 Nov 27 17:34 input.tar.gz
[2025-11-28 13:02:52] -rw-r--r-- 1 boincer umatlas         0 Nov 27 17:34 boinc_lockfile
[2025-11-28 13:02:52] -rw-r--r-- 1 boincer umatlas      2786 Nov 27 17:48 pandaJob.out
[2025-11-28 13:02:52] -rw------- 1 boincer umatlas        57 Nov 27 17:48 setup.sh.local
[2025-11-28 13:02:52] -rw------- 1 boincer umatlas    991532 Nov 27 17:48 agis_schedconf.cvmfs.json
[2025-11-28 13:02:52] -rw-r--r-- 1 boincer umatlas       532 Nov 28 12:42 boinc_task_state.xml
[2025-11-28 13:02:52] -rw-r--r-- 1 boincer umatlas      6877 Nov 28 12:56 init_data.xml
[2025-11-28 13:02:52] -rw------- 1 boincer umatlas 920750194 Nov 28 12:59 HITS.47556173._001539.pool.root.1
[2025-11-28 13:02:52] -rw------- 1 boincer umatlas      1070 Nov 28 13:00 memory_monitor_summary.json
[2025-11-28 13:02:52] -rw------- 1 boincer umatlas   1516240 Nov 28 13:01 agis_ddmendpoints.agis.ALL.json
[2025-11-28 13:02:52] -rw------- 1 boincer umatlas   2213233 Nov 28 13:01 log.47556173._001539.job.log.tgz.1
[2025-11-28 13:02:52] -rw------- 1 boincer umatlas      8636 Nov 28 13:01 heartbeat.json
[2025-11-28 13:02:52] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 13:02 boinc_mmap_file
[2025-11-28 13:02:52] -rw-r--r-- 1 boincer umatlas        28 Nov 28 13:02 wrapper_checkpoint.txt
[2025-11-28 13:02:52] -rw------- 1 boincer umatlas        96 Nov 28 13:02 pilot_heartbeat.json
[2025-11-28 13:02:52] -rw------- 1 boincer umatlas      4824 Nov 28 13:02 pilotlog.txt
[2025-11-28 13:02:52] -rw------- 1 boincer umatlas   8454401 Nov 28 13:02 log.47556173._001539.job.log.1
[2025-11-28 13:02:52] -rw------- 1 boincer umatlas       353 Nov 28 13:02 output.list
[2025-11-28 13:02:52] -rw-r--r-- 1 boincer umatlas       620 Nov 28 13:02 runtime_log
[2025-11-28 13:02:52] -rw------- 1 boincer umatlas  10690560 Nov 28 13:02 result.tar.gz
[2025-11-28 13:02:52] -rw-r--r-- 1 boincer umatlas      9428 Nov 28 13:02 runtime_log.err
[2025-11-28 13:02:52] -rw------- 1 boincer umatlas       789 Nov 28 13:02 mZHLDm3yWi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmg0JKDm5EgYpn.diag
[2025-11-28 13:02:52] -rw-r--r-- 1 boincer umatlas     24087 Nov 28 13:02 stderr.txt
[2025-11-28 13:02:53] HITS file was successfully produced:
[2025-11-28 13:02:53] -rw------- 1 boincer umatlas 920750194 Nov 28 12:59 shared/HITS.pool.root.1
[2025-11-28 13:02:53]  *** Contents of shared directory: ***
[2025-11-28 13:02:53] total 1311264
[2025-11-28 13:02:53] -rw-r--r-- 3 boincer umatlas 410669919 Nov 27 17:34 ATLAS.root_0
[2025-11-28 13:02:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 17:34 start_atlas.sh
[2025-11-28 13:02:53] -rw-r--r-- 2 boincer umatlas    590106 Nov 27 17:34 input.tar.gz
[2025-11-28 13:02:53] -rw------- 1 boincer umatlas 920750194 Nov 28 12:59 HITS.pool.root.1
[2025-11-28 13:02:53] -rw------- 1 boincer umatlas  10690560 Nov 28 13:02 result.tar.gz
13:02:54 (2492508): run_atlas exited; CPU time 269620.594960
13:02:54 (2492508): called boinc_finish(0)

</stderr_txt>
]]>

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