Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:54:58 (3321802): wrapper (7.7.26015): starting
08:54:58 (3321802): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 08:54:58] Arguments: --nthreads 9
[2025-11-27 08:54:58] Threads: 9
[2025-11-27 08:54:58] Checking for CVMFS
[2025-11-27 08:54:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 08:54:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 08:54:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 08:54:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 08:54:59] 2.13.3.0 14106 31527 291524 153366 1 728 27661549 40960000 62021 16776704 0 398587434 99.750 262275746 47230 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 08:54:59] CVMFS is ok
[2025-11-27 08:54:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 08:54:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 08:54:59] Further information can be found at the LHC@home message board.
[2025-11-27 08:54:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 08:54:59] Checking for apptainer binary...
[2025-11-27 08:54:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 08:54:59] Running /usr/bin/apptainer --version
[2025-11-27 08:54:59] apptainer version 1.4.4-1.el9
[2025-11-27 08:54:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 08:54:59] c8-7-5.aglt2.org
[2025-11-27 08:54:59] apptainer works
[2025-11-27 08:54:59] Set ATHENA_PROC_NUMBER=9
[2025-11-27 08:54:59] Set ATHENA_CORE_NUMBER=9
[2025-11-27 08:54:59] Starting ATLAS job with PandaID=6898376984
[2025-11-27 08:54:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 20:00:28]  *** The last 200 lines of the pilot log: ***
[2025-11-27 20:00:28] 2025-11-28 00:59:06,874 | INFO     | sum of square deviations: 85157032890.08603
[2025-11-27 20:00:28] 2025-11-28 00:59:06,879 | INFO     | sum of deviations: 1436306851386.0278
[2025-11-27 20:00:28] 2025-11-28 00:59:06,879 | INFO     | mean x: 1764271691.8646154
[2025-11-27 20:00:28] 2025-11-28 00:59:06,879 | INFO     | mean y: 2977985.670769231
[2025-11-27 20:00:28] 2025-11-28 00:59:06,879 | INFO     | intersect: -29754229760.19209
[2025-11-27 20:00:28] 2025-11-28 00:59:06,880 | INFO     | chi2: 16.86580537740143
[2025-11-27 20:00:28] 2025-11-28 00:59:06,880 | INFO     | sum of square deviations: 83207229643.20296
[2025-11-27 20:00:28] 2025-11-28 00:59:06,885 | INFO     | sum of deviations: 1674950857472.9958
[2025-11-27 20:00:28] 2025-11-28 00:59:06,885 | INFO     | mean x: 1764271539.3751938
[2025-11-27 20:00:28] 2025-11-28 00:59:06,885 | INFO     | mean y: 2996646.0248062015
[2025-11-27 20:00:28] 2025-11-28 00:59:06,886 | INFO     | intersect: -35511563090.70929
[2025-11-27 20:00:28] 2025-11-28 00:59:06,886 | INFO     | chi2: 13.545492739720636
[2025-11-27 20:00:28] 2025-11-28 00:59:06,886 | INFO     | current chi2=13.545492739720636 (change=19.686653340193853 %)
[2025-11-27 20:00:28] 2025-11-28 00:59:06,886 | INFO     | right removable region: 644
[2025-11-27 20:00:28] 2025-11-28 00:59:06,886 | INFO     | sum of square deviations: 83206688573.20291
[2025-11-27 20:00:28] 2025-11-28 00:59:06,891 | INFO     | sum of deviations: 1150903024607.1182
[2025-11-27 20:00:28] 2025-11-28 00:59:06,892 | INFO     | mean x: 1764271844.3751938
[2025-11-27 20:00:28] 2025-11-28 00:59:06,892 | INFO     | mean y: 3000301.057364341
[2025-11-27 20:00:28] 2025-11-28 00:59:06,892 | INFO     | intersect: -24400155704.05402
[2025-11-27 20:00:28] 2025-11-28 00:59:06,892 | INFO     | chi2: 11.82816251366255
[2025-11-27 20:00:28] 2025-11-28 00:59:06,892 | INFO     | current chi2=11.82816251366255 (change=29.8689730553208 %)
[2025-11-27 20:00:28] 2025-11-28 00:59:06,892 | INFO     | sum of square deviations: 81286344818.67351
[2025-11-27 20:00:28] 2025-11-28 00:59:06,897 | INFO     | sum of deviations: 909207155928.0676
[2025-11-27 20:00:28] 2025-11-28 00:59:06,898 | INFO     | mean x: 1764271996.8859375
[2025-11-27 20:00:28] 2025-11-28 00:59:06,898 | INFO     | mean y: 3019490.3296875
[2025-11-27 20:00:28] 2025-11-28 00:59:06,898 | INFO     | intersect: -19730783624.45493
[2025-11-27 20:00:28] 2025-11-28 00:59:06,898 | INFO     | chi2: 8.4107657104984
[2025-11-27 20:00:28] 2025-11-28 00:59:06,898 | INFO     | current chi2=8.4107657104984 (change=28.892034576095497 %)
[2025-11-27 20:00:28] 2025-11-28 00:59:06,898 | INFO     | sum of square deviations: 79395769063.9936
[2025-11-27 20:00:28] 2025-11-28 00:59:06,903 | INFO     | sum of deviations: 652609422043.199
[2025-11-27 20:00:28] 2025-11-28 00:59:06,903 | INFO     | mean x: 1764272149.3968503
[2025-11-27 20:00:28] 2025-11-28 00:59:06,904 | INFO     | mean y: 3040185.4992125984
[2025-11-27 20:00:28] 2025-11-28 00:59:06,904 | INFO     | intersect: -14498748024.610184
[2025-11-27 20:00:28] 2025-11-28 00:59:06,904 | INFO     | chi2: 4.655651989941377
[2025-11-27 20:00:28] 2025-11-28 00:59:06,904 | INFO     | current chi2=4.655651989941377 (change=44.64651435801919 %)
[2025-11-27 20:00:28] 2025-11-28 00:59:06,904 | INFO     | sum of square deviations: 77534844591.09372
[2025-11-27 20:00:28] 2025-11-28 00:59:06,909 | INFO     | sum of deviations: 542280465588.5729
[2025-11-27 20:00:28] 2025-11-28 00:59:06,909 | INFO     | mean x: 1764272301.9031746
[2025-11-27 20:00:28] 2025-11-28 00:59:06,909 | INFO     | mean y: 3049206.7634920636
[2025-11-27 20:00:28] 2025-11-28 00:59:06,909 | INFO     | intersect: -12336311378.10282
[2025-11-27 20:00:28] 2025-11-28 00:59:06,910 | INFO     | chi2: 3.8596340586186324
[2025-11-27 20:00:28] 2025-11-28 00:59:06,910 | INFO     | current chi2=3.8596340586186324 (change=17.097883025676232 %)
[2025-11-27 20:00:28] 2025-11-28 00:59:06,910 | INFO     | left removable region: 40
[2025-11-27 20:00:28] 2025-11-28 00:59:06,910 | INFO     | sum of square deviations: 68326000467.93876
[2025-11-27 20:00:28] 2025-11-28 00:59:06,914 | INFO     | sum of deviations: 672725697854.0958
[2025-11-27 20:00:28] 2025-11-28 00:59:06,915 | INFO     | mean x: 1764272728.928808
[2025-11-27 20:00:28] 2025-11-28 00:59:06,915 | INFO     | mean y: 3082044.3278145697
[2025-11-27 20:00:28] 2025-11-28 00:59:06,915 | INFO     | intersect: -17367634734.71897
[2025-11-27 20:00:28] 2025-11-28 00:59:06,915 | INFO     | chi2: 0.09986887477252045
[2025-11-27 20:00:28] 2025-11-28 00:59:06,915 | INFO     | current memory leak: 9.85 B/s (using 604 data points, chi2=0.10)
[2025-11-27 20:00:28] 2025-11-28 00:59:06,916 | INFO     | could have reported an average CPU frequency of 3798 MHz (25 samples)
[2025-11-27 20:00:28] 2025-11-28 00:59:06,916 | INFO     | ..............................
[2025-11-27 20:00:28] 2025-11-28 00:59:06,916 | INFO     | . Timing measurements:
[2025-11-27 20:00:28] 2025-11-28 00:59:06,916 | INFO     | . get job = 0 s
[2025-11-27 20:00:28] 2025-11-28 00:59:06,916 | INFO     | . initial setup = 4 s
[2025-11-27 20:00:28] 2025-11-28 00:59:06,916 | INFO     | . payload setup = 43 s
[2025-11-27 20:00:28] 2025-11-28 00:59:06,916 | INFO     | . stage-in = 0 s
[2025-11-27 20:00:28] 2025-11-28 00:59:06,916 | INFO     | . payload execution = 39639 s
[2025-11-27 20:00:28] 2025-11-28 00:59:06,916 | INFO     | . stage-out = 5 s
[2025-11-27 20:00:28] 2025-11-28 00:59:06,916 | INFO     | . log creation = 1 s
[2025-11-27 20:00:28] 2025-11-28 00:59:06,916 | INFO     | ..............................
[2025-11-27 20:00:28] 2025-11-28 00:59:06,965 | INFO     | 
[2025-11-27 20:00:28] 2025-11-28 00:59:06,965 | INFO     | job summary report
[2025-11-27 20:00:28] 2025-11-28 00:59:06,965 | INFO     | --------------------------------------------------
[2025-11-27 20:00:28] 2025-11-28 00:59:06,965 | INFO     | PanDA job id: 6898376984
[2025-11-27 20:00:28] 2025-11-28 00:59:06,965 | INFO     | task id: 47556161
[2025-11-27 20:00:28] 2025-11-28 00:59:06,965 | INFO     | errors: (none)
[2025-11-27 20:00:28] 2025-11-28 00:59:06,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 20:00:28] 2025-11-28 00:59:06,965 | INFO     | pilot state: finished 
[2025-11-27 20:00:28] 2025-11-28 00:59:06,965 | INFO     | transexitcode: 0
[2025-11-27 20:00:28] 2025-11-28 00:59:06,965 | INFO     | exeerrorcode: 0
[2025-11-27 20:00:28] 2025-11-28 00:59:06,965 | INFO     | exeerrordiag: 
[2025-11-27 20:00:28] 2025-11-28 00:59:06,965 | INFO     | exitcode: 0
[2025-11-27 20:00:28] 2025-11-28 00:59:06,965 | INFO     | exitmsg: OK
[2025-11-27 20:00:28] 2025-11-28 00:59:06,965 | INFO     | cpuconsumptiontime: 141892 s
[2025-11-27 20:00:28] 2025-11-28 00:59:06,966 | INFO     | nevents: 1000
[2025-11-27 20:00:28] 2025-11-28 00:59:06,966 | INFO     | neventsw: 0
[2025-11-27 20:00:28] 2025-11-28 00:59:06,966 | INFO     | pid: 3356479
[2025-11-27 20:00:28] 2025-11-28 00:59:06,966 | INFO     | pgrp: 3356479
[2025-11-27 20:00:28] 2025-11-28 00:59:06,966 | INFO     | corecount: 9
[2025-11-27 20:00:28] 2025-11-28 00:59:06,966 | INFO     | event service: False
[2025-11-27 20:00:28] 2025-11-28 00:59:06,966 | INFO     | sizes: {0: 2284315, 11: 2284315, 22: 2284343, 25: 2284633, 33: 2284661, 39687: 2327738, 39694: 2336788, 39731: 2337042}
[2025-11-27 20:00:28] 2025-11-28 00:59:06,966 | INFO     | --------------------------------------------------
[2025-11-27 20:00:28] 2025-11-28 00:59:06,966 | INFO     | 
[2025-11-27 20:00:28] 2025-11-28 00:59:06,966 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 20:00:28] 2025-11-28 00:59:07,071 | INFO     | time since job start (39800s) is within the limit (172800.0s)
[2025-11-27 20:00:28] 2025-11-28 00:59:07,103 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,103 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,103 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,103 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,103 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,103 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,103 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,103 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,103 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,103 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,103 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,121 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,121 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,121 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,121 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,121 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 20:00:28] 2025-11-28 00:59:07,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,121 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 20:00:28] 2025-11-28 00:59:07,121 | INFO     | job 6898376984 has completed (purged errors)
[2025-11-27 20:00:28] 2025-11-28 00:59:07,121 | INFO     | overall cleanup function is called
[2025-11-27 20:00:28] 2025-11-28 00:59:08,322 | INFO     | --- collectZombieJob: --- 10, [3356479]
[2025-11-27 20:00:28] 2025-11-28 00:59:08,322 | INFO     | zombie collector waiting for pid 3356479
[2025-11-27 20:00:28] 2025-11-28 00:59:08,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 20:00:28] 2025-11-28 00:59:08,322 | INFO     | collected zombie processes
[2025-11-27 20:00:28] 2025-11-28 00:59:08,322 | INFO     | will attempt to kill all subprocesses of pid=3356479
[2025-11-27 20:00:28] 2025-11-28 00:59:12,380 | INFO     | process IDs to be killed: [3356479] (in reverse order)
[2025-11-27 20:00:28] 2025-11-28 00:59:12,555 | INFO     | PID=3335811 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 20:00:28] 2025-11-28 00:59:12,555 | INFO     | .. there are 99 such processes running
[2025-11-27 20:00:28] 2025-11-28 00:59:12,832 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 20:00:28] 2025-11-28 00:59:12,832 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 20:00:28] 2025-11-28 00:59:12,892 | INFO     | did not find any defunct processes belonging to 3356479
[2025-11-27 20:00:28] 2025-11-28 00:59:12,964 | INFO     | did not find any defunct processes belonging to 3356479
[2025-11-27 20:00:28] 2025-11-28 00:59:12,978 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 20:00:28] 2025-11-28 00:59:12,978 | INFO     | ready for new job
[2025-11-27 20:00:28] 2025-11-28 00:59:12,978 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 20:00:28] 2025-11-28 00:59:12,980 | INFO     | ***************************************
[2025-11-27 20:00:28] 2025-11-28 00:59:12,981 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 20:00:28] 2025-11-28 00:59:12,981 | INFO     | ***************************************
[2025-11-27 20:00:28] 2025-11-28 00:59:12,981 | INFO     | 
[2025-11-27 20:00:28] 2025-11-28 00:59:12,989 | INFO     | architecture information:
[2025-11-27 20:00:28] 2025-11-28 00:59:13,010 | INFO     | executing command: cat /etc/os-release
[2025-11-27 20:00:28] 2025-11-28 00:59:13,122 | INFO     | cat /etc/os-release:
[2025-11-27 20:00:28] NAME="CentOS Linux"
[2025-11-27 20:00:28] VERSION="7 (Core)"
[2025-11-27 20:00:28] ID="centos"
[2025-11-27 20:00:28] ID_LIKE="rhel fedora"
[2025-11-27 20:00:28] VERSION_ID="7"
[2025-11-27 20:00:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 20:00:28] ANSI_COLOR="0;31"
[2025-11-27 20:00:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 20:00:28] HOME_URL="https://www.centos.org/"
[2025-11-27 20:00:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 20:00:28] 
[2025-11-27 20:00:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 20:00:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 20:00:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 20:00:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 20:00:28] 
[2025-11-27 20:00:28] 2025-11-28 00:59:13,122 | INFO     | ***************************************
[2025-11-27 20:00:28] 2025-11-28 00:59:13,626 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 20:00:28] 2025-11-28 00:59:13,738 | INFO     | sufficient remaining disk space (162702295040 B)
[2025-11-27 20:00:28] 2025-11-28 00:59:13,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 20:00:28] 2025-11-28 00:59:13,739 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 20:00:28] 2025-11-28 00:59:13,739 | INFO     | update_server=False
[2025-11-27 20:00:28] 2025-11-28 00:59:13,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 20:00:28] 2025-11-28 00:59:13,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 20:00:28] 2025-11-28 00:59:13,745 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:00:28] 2025-11-28 00:59:13,745 | INFO     | aborting loop
[2025-11-27 20:00:28] 2025-11-28 00:59:14,745 | INFO     | [job] retrieve thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:14,749 | INFO     | all data control threads have been joined
[2025-11-27 20:00:28] 2025-11-28 00:59:14,766 | INFO     | [job] job monitor thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:15,241 | INFO     | all payload control threads have been joined
[2025-11-27 20:00:28] 2025-11-28 00:59:15,283 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:15,312 | INFO     | all job control threads have been joined
[2025-11-27 20:00:28] 2025-11-28 00:59:15,385 | INFO     | [payload] failed_post thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:15,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:15,688 | INFO     | [job] validate thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:15,722 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:15,722 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:15,756 | INFO     | [data] control thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:15,759 | INFO     | [data] copytool_out thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:15,944 | INFO     | [data] copytool_in thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:16,118 | INFO     | [payload] validate_post thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:16,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:00:28] 2025-11-28 00:59:16,255 | INFO     | [payload] control thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:16,320 | INFO     | [job] control thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:16,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 20:00:28] 2025-11-28 00:59:17,226 | INFO     | [job] queue monitor thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:20,572 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 20:00:28] 2025-11-28 00:59:46,761 | INFO     | PID=3335811 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 20:00:28] 2025-11-28 00:59:46,761 | INFO     | .. there are 99 such processes running
[2025-11-27 20:00:28] 2025-11-28 00:59:46,762 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 20:00:28] 2025-11-28 00:59:46,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 20:00:28] 2025-11-28 00:59:46,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 20:00:28] 2025-11-28 00:59:58,428 | INFO     | [monitor] cgroup control has ended
[2025-11-27 20:00:28] 2025-11-28 00:59:59,560 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139719940495168)>', '<ExcThread(monitor, started 139719178450688)>']
[2025-11-27 20:00:28] 2025-11-28 00:59:59,847 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 20:00:28] 2025-11-28 00:59:59,847 | INFO     | [monitor] control thread has ended
[2025-11-27 20:00:28] 2025-11-28 01:00:04,587 | INFO     | all workflow threads have been joined
[2025-11-27 20:00:28] 2025-11-28 01:00:04,587 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 20:00:28] 2025-11-28 01:00:04,587 | INFO     | traces error code: 0
[2025-11-27 20:00:28] 2025-11-28 01:00:04,587 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 20:00:28] 2025-11-28 01:00:07,211 [wrapper] ==== pilot stdout END ====
[2025-11-27 20:00:28] 2025-11-28 01:00:07,266 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 20:00:28] 2025-11-28 01:00:07,296 [wrapper] pilotpid: 3335811
[2025-11-27 20:00:28] 2025-11-28 01:00:07,324 [wrapper] Pilot exit status: 0
[2025-11-27 20:00:28] 2025-11-28 01:00:07,417 [wrapper] pandaids: 6898376984
[2025-11-27 20:00:28] 2025-11-28 01:00:07,746 [wrapper] cleanup supervisor_pilot  355443 3335812
[2025-11-27 20:00:28] 2025-11-28 01:00:07,791 [wrapper] Test setup, not cleaning
[2025-11-27 20:00:28] 2025-11-28 01:00:07,800 [wrapper] apfmon messages muted
[2025-11-27 20:00:28] 2025-11-28 01:00:07,816 [wrapper] ==== wrapper stdout END ====
[2025-11-27 20:00:28] 2025-11-28 01:00:07,844 [wrapper] ==== wrapper stderr END ====
[2025-11-27 20:00:28]  *** Error codes and diagnostics ***
[2025-11-27 20:00:28]     "exeErrorCode": 0,
[2025-11-27 20:00:28]     "exeErrorDiag": "",
[2025-11-27 20:00:28]     "pilotErrorCode": 0,
[2025-11-27 20:00:28]     "pilotErrorDiag": "",
[2025-11-27 20:00:28]  *** Listing of results directory ***
[2025-11-27 20:00:28] total 1331020
[2025-11-27 20:00:28] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:04 pilot3.tar.gz
[2025-11-27 20:00:28] -rwx------. 1 boincer umatlas     36292 Nov 26 11:04 runpilot2-wrapper.sh
[2025-11-27 20:00:28] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:04 queuedata.json
[2025-11-27 20:00:28] -rw-r--r--. 1 boincer umatlas       100 Nov 27 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 20:00:28] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 08:54 run_atlas
[2025-11-27 20:00:28] -rw-r--r--. 1 boincer umatlas       105 Nov 27 08:54 job.xml
[2025-11-27 20:00:28] -rw-r--r--. 2 boincer umatlas 411670656 Nov 27 08:54 EVNT.47483658._002564.pool.root.1
[2025-11-27 20:00:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 08:54 start_atlas.sh
[2025-11-27 20:00:28] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 08:54 shared
[2025-11-27 20:00:28] -rw-r--r--. 2 boincer umatlas    590097 Nov 27 08:54 input.tar.gz
[2025-11-27 20:00:28] -rw-r--r--. 1 boincer umatlas         0 Nov 27 08:54 boinc_lockfile
[2025-11-27 20:00:28] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 08:54 pandaJob.out
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas        57 Nov 27 08:55 setup.sh.local
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas    991588 Nov 27 08:55 agis_schedconf.cvmfs.json
[2025-11-27 20:00:28] drwx------. 5 boincer umatlas      4096 Nov 27 08:55 pilot3
[2025-11-27 20:00:28] -rw-r--r--. 1 boincer umatlas       533 Nov 27 19:51 boinc_task_state.xml
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas 934054013 Nov 27 19:57 HITS.47556161._005462.pool.root.1
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas      1052 Nov 27 19:58 memory_monitor_summary.json
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas   1516240 Nov 27 19:58 agis_ddmendpoints.agis.ALL.json
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas   1957839 Nov 27 19:58 log.47556161._005462.job.log.tgz.1
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas      8570 Nov 27 19:59 heartbeat.json
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas        95 Nov 27 19:59 pilot_heartbeat.json
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas      4825 Nov 27 20:00 pilotlog.txt
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas   4703977 Nov 27 20:00 log.47556161._005462.job.log.1
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas       353 Nov 27 20:00 output.list
[2025-11-27 20:00:28] -rw-r--r--. 1 boincer umatlas       620 Nov 27 20:00 runtime_log
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas   6676480 Nov 27 20:00 result.tar.gz
[2025-11-27 20:00:28] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 20:00 runtime_log.err
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas       659 Nov 27 20:00 qASMDm5AXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmR7MKDmVgTnWm.diag
[2025-11-27 20:00:28] -rw-r--r--. 1 boincer umatlas      7173 Nov 27 20:00 init_data.xml
[2025-11-27 20:00:28] -rw-r--r--. 1 boincer umatlas        29 Nov 27 20:00 wrapper_checkpoint.txt
[2025-11-27 20:00:28] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 20:00 boinc_mmap_file
[2025-11-27 20:00:28] -rw-r--r--. 1 boincer umatlas     21271 Nov 27 20:00 stderr.txt
[2025-11-27 20:00:28] HITS file was successfully produced:
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas 934054013 Nov 27 19:57 shared/HITS.pool.root.1
[2025-11-27 20:00:28]  *** Contents of shared directory: ***
[2025-11-27 20:00:28] total 1321312
[2025-11-27 20:00:28] -rw-r--r--. 2 boincer umatlas 411670656 Nov 27 08:54 ATLAS.root_0
[2025-11-27 20:00:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 08:54 start_atlas.sh
[2025-11-27 20:00:28] -rw-r--r--. 2 boincer umatlas    590097 Nov 27 08:54 input.tar.gz
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas 934054013 Nov 27 19:57 HITS.pool.root.1
[2025-11-27 20:00:28] -rw-------. 1 boincer umatlas   6676480 Nov 27 20:00 result.tar.gz
20:00:30 (3321802): run_atlas exited; CPU time 142609.904796
20:00:30 (3321802): called boinc_finish(0)

</stderr_txt>
]]>

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