Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:11:55 (2901030): wrapper (7.7.26015): starting
10:11:55 (2901030): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 10:11:55] Arguments: --nthreads 8
[2025-11-27 10:11:55] Threads: 8
[2025-11-27 10:11:55] Checking for CVMFS
[2025-11-27 10:11:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 10:11:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 10:11:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 10:11:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 10:11:57] 2.13.2.0 14352 35971 202752 153370 2 141 36356460 40960001 29497 16776704 0 283207372 99.682 225766240 48342 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 10:11:57] CVMFS is ok
[2025-11-27 10:11:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 10:11:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 10:11:57] Further information can be found at the LHC@home message board.
[2025-11-27 10:11:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 10:11:57] Checking for apptainer binary...
[2025-11-27 10:11:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 10:11:57] Running /usr/bin/apptainer --version
[2025-11-27 10:11:58] apptainer version 1.4.4-1.el9
[2025-11-27 10:11:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 10:11:59] c-208-36.aglt2.org
[2025-11-27 10:11:59] apptainer works
[2025-11-27 10:11:59] Set ATHENA_PROC_NUMBER=8
[2025-11-27 10:11:59] Set ATHENA_CORE_NUMBER=8
[2025-11-27 10:11:59] Starting ATLAS job with PandaID=6897372847
[2025-11-27 10:11:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:40:18]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:40:18] 2025-11-27 21:45:26,523 | INFO     | monitor loop #1533: job 0:6897372847 is in state 'finished'
[2025-11-27 17:40:18] 2025-11-27 21:45:26,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:40:18] 2025-11-27 21:45:27,335 | INFO     | PID=2914890 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 17:40:18] 2025-11-27 21:45:27,336 | INFO     | .. there are 32 such processes running
[2025-11-27 17:40:18] 2025-11-27 21:45:28,352 | INFO     | time since job start (23570s) is within the limit (172800.0s)
[2025-11-27 17:40:18] 2025-11-27 21:45:29,048 | INFO     | monitor loop #1534: job 0:6897372847 is in state 'finished'
[2025-11-27 17:40:18] 2025-11-27 21:45:29,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:40:18] 2025-11-27 21:45:30,362 | INFO     | time since job start (23572s) is within the limit (172800.0s)
[2025-11-27 17:40:18] 2025-11-27 21:45:31,557 | INFO     | monitor loop #1535: job 0:6897372847 is in state 'finished'
[2025-11-27 17:40:18] 2025-11-27 21:45:31,557 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:40:18] 2025-11-27 21:45:32,368 | INFO     | time since job start (23574s) is within the limit (172800.0s)
[2025-11-27 17:40:18] 2025-11-27 21:45:34,069 | INFO     | monitor loop #1536: job 0:6897372847 is in state 'finished'
[2025-11-27 17:40:18] 2025-11-27 21:45:34,069 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:40:18] 2025-11-27 21:45:34,375 | INFO     | time since job start (23576s) is within the limit (172800.0s)
[2025-11-27 17:40:18] 2025-11-27 21:45:36,382 | INFO     | time since job start (23578s) is within the limit (172800.0s)
[2025-11-27 17:40:18] 2025-11-27 21:45:36,574 | INFO     | monitor loop #1537: job 0:6897372847 is in state 'finished'
[2025-11-27 17:40:18] 2025-11-27 21:45:36,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:40:18] 2025-11-27 21:45:37,501 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 17:40:18] 2025-11-27 21:45:37,521 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3774.9761328125005
[2025-11-27 17:40:18] 2025-11-27 21:45:37,602 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897372847/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 17:40:18] 2025-11-27 21:45:37,603 | INFO     | extracted standard info from prmon json
[2025-11-27 17:40:18] 2025-11-27 21:45:37,603 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:40:18] 2025-11-27 21:45:37,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:40:18] 2025-11-27 21:45:37,639 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:40:18] 2025-11-27 21:45:37,676 | INFO     | sum of square deviations: 17691044247.50644
[2025-11-27 17:40:18] 2025-11-27 21:45:37,678 | INFO     | sum of deviations: -358304445409.71423
[2025-11-27 17:40:18] 2025-11-27 21:45:37,678 | INFO     | mean x: 1764268129.5844157
[2025-11-27 17:40:18] 2025-11-27 21:45:37,678 | INFO     | mean y: 2738357.5142857144
[2025-11-27 17:40:18] 2025-11-27 21:45:37,678 | INFO     | intersect: 35735231300.313805
[2025-11-27 17:40:18] 2025-11-27 21:45:37,679 | INFO     | chi2: 20.8898152265948
[2025-11-27 17:40:18] 2025-11-27 21:45:37,679 | INFO     | sum of square deviations: 17010715199.789526
[2025-11-27 17:40:18] 2025-11-27 21:45:37,688 | INFO     | sum of deviations: -243531403449.42114
[2025-11-27 17:40:18] 2025-11-27 21:45:37,688 | INFO     | mean x: 1764267977.1052632
[2025-11-27 17:40:18] 2025-11-27 21:45:37,688 | INFO     | mean y: 2764076.4105263157
[2025-11-27 17:40:18] 2025-11-27 21:45:37,688 | INFO     | intersect: 25260647209.427303
[2025-11-27 17:40:18] 2025-11-27 21:45:37,689 | INFO     | chi2: 17.562767265301535
[2025-11-27 17:40:18] 2025-11-27 21:45:37,689 | INFO     | current chi2=17.562767265301535 (change=15.926650978978518 %)
[2025-11-27 17:40:18] 2025-11-27 21:45:37,689 | INFO     | right removable region: 379
[2025-11-27 17:40:18] 2025-11-27 21:45:37,689 | INFO     | sum of square deviations: 17010366342.997261
[2025-11-27 17:40:18] 2025-11-27 21:45:37,691 | INFO     | sum of deviations: -440812854342.7868
[2025-11-27 17:40:18] 2025-11-27 21:45:37,691 | INFO     | mean x: 1764268282.1026316
[2025-11-27 17:40:18] 2025-11-27 21:45:37,691 | INFO     | mean y: 2756748.6868421054
[2025-11-27 17:40:18] 2025-11-27 21:45:37,691 | INFO     | intersect: 45722650228.833466
[2025-11-27 17:40:18] 2025-11-27 21:45:37,691 | INFO     | chi2: 19.07193422425079
[2025-11-27 17:40:18] 2025-11-27 21:45:37,691 | INFO     | current chi2=19.07193422425079 (change=8.702235910778509 %)
[2025-11-27 17:40:18] 2025-11-27 21:45:37,692 | INFO     | left removable region: 10
[2025-11-27 17:40:18] 2025-11-27 21:45:37,709 | INFO     | sum of square deviations: 15575226150.780506
[2025-11-27 17:40:18] 2025-11-27 21:45:37,734 | INFO     | sum of deviations: -310119871546.4146
[2025-11-27 17:40:18] 2025-11-27 21:45:37,735 | INFO     | mean x: 1764268251.6422765
[2025-11-27 17:40:18] 2025-11-27 21:45:37,735 | INFO     | mean y: 2789707.398373984
[2025-11-27 17:40:18] 2025-11-27 21:45:37,735 | INFO     | intersect: 35131309722.1978
[2025-11-27 17:40:18] 2025-11-27 21:45:37,735 | INFO     | chi2: 15.100143651533346
[2025-11-27 17:40:18] 2025-11-27 21:45:37,735 | INFO     | current memory leak: -19.91 B/s (using 369 data points, chi2=15.10)
[2025-11-27 17:40:18] 2025-11-27 21:45:37,736 | INFO     | could have reported an average CPU frequency of 3754 MHz (16 samples)
[2025-11-27 17:40:18] 2025-11-27 21:45:37,736 | INFO     | ..............................
[2025-11-27 17:40:18] 2025-11-27 21:45:37,736 | INFO     | . Timing measurements:
[2025-11-27 17:40:18] 2025-11-27 21:45:37,736 | INFO     | . get job = 0 s
[2025-11-27 17:40:18] 2025-11-27 21:45:37,736 | INFO     | . initial setup = 4 s
[2025-11-27 17:40:18] 2025-11-27 21:45:37,736 | INFO     | . payload setup = 14 s
[2025-11-27 17:40:18] 2025-11-27 21:45:37,736 | INFO     | . stage-in = 0 s
[2025-11-27 17:40:18] 2025-11-27 21:45:37,736 | INFO     | . payload execution = 23482 s
[2025-11-27 17:40:18] 2025-11-27 21:45:37,736 | INFO     | . stage-out = 6 s
[2025-11-27 17:40:18] 2025-11-27 21:45:37,736 | INFO     | . log creation = 1 s
[2025-11-27 17:40:18] 2025-11-27 21:45:37,736 | INFO     | ..............................
[2025-11-27 17:40:18] 2025-11-27 21:45:37,951 | INFO     | 
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | job summary report
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | --------------------------------------------------
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | PanDA job id: 6897372847
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | task id: 47556161
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | errors: (none)
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | pilot state: finished 
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | transexitcode: 0
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | exeerrorcode: 0
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | exeerrordiag: 
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | exitcode: 0
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | exitmsg: OK
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | cpuconsumptiontime: 139625 s
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | nevents: 1000
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | neventsw: 0
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | pid: 2943577
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | pgrp: 2943577
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | corecount: 8
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | event service: False
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | sizes: {0: 2284265, 11: 2284265, 13: 2284555, 22: 2284611, 23501: 2320658, 23508: 2329652, 23509: 2329836, 23546: 2330082}
[2025-11-27 17:40:18] 2025-11-27 21:45:37,952 | INFO     | --------------------------------------------------
[2025-11-27 17:40:18] 2025-11-27 21:45:37,953 | INFO     | 
[2025-11-27 17:40:18] 2025-11-27 21:45:37,953 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 17:40:18] 2025-11-27 21:45:38,133 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,133 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,133 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | job 6897372847 has completed (purged errors)
[2025-11-27 17:40:18] 2025-11-27 21:45:38,134 | INFO     | overall cleanup function is called
[2025-11-27 17:40:18] 2025-11-27 21:45:39,203 | INFO     | --- collectZombieJob: --- 10, [2943577]
[2025-11-27 17:40:18] 2025-11-27 21:45:39,203 | INFO     | zombie collector waiting for pid 2943577
[2025-11-27 17:40:18] 2025-11-27 21:45:39,204 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:40:18] 2025-11-27 21:45:39,204 | INFO     | collected zombie processes
[2025-11-27 17:40:18] 2025-11-27 21:45:39,204 | INFO     | will attempt to kill all subprocesses of pid=2943577
[2025-11-27 17:40:18] 2025-11-27 21:45:41,052 | INFO     | process IDs to be killed: [2943577] (in reverse order)
[2025-11-27 17:40:18] 2025-11-27 21:45:41,765 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:40:18] 2025-11-27 21:45:41,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:40:18] 2025-11-27 21:45:41,814 | INFO     | did not find any defunct processes belonging to 2943577
[2025-11-27 17:40:18] 2025-11-27 21:45:41,869 | INFO     | did not find any defunct processes belonging to 2943577
[2025-11-27 17:40:18] 2025-11-27 21:45:41,875 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:40:18] 2025-11-27 21:45:41,875 | INFO     | ready for new job
[2025-11-27 17:40:18] 2025-11-27 21:45:41,875 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:40:18] 2025-11-27 21:45:41,884 | INFO     | ***************************************
[2025-11-27 17:40:18] 2025-11-27 21:45:41,885 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:40:18] 2025-11-27 21:45:41,885 | INFO     | ***************************************
[2025-11-27 17:40:18] 2025-11-27 21:45:41,885 | INFO     | 
[2025-11-27 17:40:18] 2025-11-27 21:45:41,907 | INFO     | architecture information:
[2025-11-27 17:40:18] 2025-11-27 21:45:41,940 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:40:18] 2025-11-27 21:45:41,986 | INFO     | cat /etc/os-release:
[2025-11-27 17:40:18] NAME="CentOS Linux"
[2025-11-27 17:40:18] VERSION="7 (Core)"
[2025-11-27 17:40:18] ID="centos"
[2025-11-27 17:40:18] ID_LIKE="rhel fedora"
[2025-11-27 17:40:18] VERSION_ID="7"
[2025-11-27 17:40:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:40:18] ANSI_COLOR="0;31"
[2025-11-27 17:40:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:40:18] HOME_URL="https://www.centos.org/"
[2025-11-27 17:40:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:40:18] 
[2025-11-27 17:40:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:40:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:40:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:40:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:40:18] 
[2025-11-27 17:40:18] 2025-11-27 21:45:41,986 | INFO     | ***************************************
[2025-11-27 17:40:18] 2025-11-27 21:45:42,490 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 17:40:18] 2025-11-27 21:45:42,555 | INFO     | sufficient remaining disk space (158321344512 B)
[2025-11-27 17:40:18] 2025-11-27 21:45:42,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:40:18] 2025-11-27 21:45:42,556 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:40:18] 2025-11-27 21:45:42,556 | INFO     | update_server=False
[2025-11-27 17:40:18] 2025-11-27 21:45:42,556 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:40:18] 2025-11-27 21:45:42,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:40:18] 2025-11-27 21:45:42,629 | INFO     | aborting loop
[2025-11-27 17:40:18] 2025-11-27 21:45:42,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:40:18] 2025-11-27 21:45:42,838 | INFO     | all job control threads have been joined
[2025-11-27 17:40:18] 2025-11-27 21:45:42,968 | INFO     | all data control threads have been joined
[2025-11-27 17:40:18] 2025-11-27 21:45:42,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:40:18] 2025-11-27 21:45:43,125 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:40:18] 2025-11-27 21:45:43,241 | INFO     | all payload control threads have been joined
[2025-11-27 17:40:18] 2025-11-27 21:45:43,561 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:43,635 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:43,849 | INFO     | [job] control thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:43,973 | INFO     | [data] control thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:43,988 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:44,146 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:44,146 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:44,151 | INFO     | [job] validate thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:44,152 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:44,228 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:44,252 | INFO     | [payload] control thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:44,395 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:44,606 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:44,746 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:45,132 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:45:46,801 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:40:18] 2025-11-27 21:46:12,853 | INFO     | PID=2914890 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 17:40:18] 2025-11-27 21:46:12,853 | INFO     | .. there are 32 such processes running
[2025-11-27 17:40:18] 2025-11-27 21:46:12,853 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:40:18] 2025-11-27 21:46:12,853 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:40:18] 2025-11-27 21:46:12,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:40:18] 2025-11-27 21:46:18,040 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:40:18] 2025-11-27 21:46:18,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139704481048384)>', '<ExcThread(monitor, started 139704003454720)>']
[2025-11-27 17:40:18] 2025-11-27 21:46:18,889 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:40:18] 2025-11-27 21:46:18,889 | INFO     | [monitor] control thread has ended
[2025-11-27 17:40:18] 2025-11-27 21:46:23,279 | INFO     | all workflow threads have been joined
[2025-11-27 17:40:18] 2025-11-27 21:46:23,279 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:40:18] 2025-11-27 21:46:23,279 | INFO     | traces error code: 0
[2025-11-27 17:40:18] 2025-11-27 21:46:23,279 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:40:18] 2025-11-27 21:46:24,091 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:40:18] 2025-11-27 21:46:24,118 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:40:18] 2025-11-27 21:46:24,148 [wrapper] pilotpid: 2914890
[2025-11-27 17:40:18] 2025-11-27 21:46:24,179 [wrapper] Pilot exit status: 0
[2025-11-27 17:40:18] 2025-11-27 21:46:24,474 [wrapper] pandaids: 6897372847
[2025-11-27 17:40:18] 2025-11-27 21:46:25,240 [wrapper] cleanup supervisor_pilot 1157063 2914891
[2025-11-27 17:40:18] 2025-11-27 21:46:25,293 [wrapper] Test setup, not cleaning
[2025-11-27 17:40:18] 2025-11-27 21:46:25,321 [wrapper] apfmon messages muted
[2025-11-27 17:40:18] 2025-11-27 21:46:25,351 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:40:18] 2025-11-27 21:46:25,425 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:40:18]  *** Error codes and diagnostics ***
[2025-11-27 17:40:18]     "exeErrorCode": 0,
[2025-11-27 17:40:18]     "exeErrorDiag": "",
[2025-11-27 17:40:18]     "pilotErrorCode": 0,
[2025-11-27 17:40:18]     "pilotErrorDiag": "",
[2025-11-27 17:40:18]  *** Listing of results directory ***
[2025-11-27 17:40:18] total 1311680
[2025-11-27 17:40:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:48 queuedata.json
[2025-11-27 17:40:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 17:40:18] -rwx------. 1 boincer umatlas     36292 Nov 25 11:48 runpilot2-wrapper.sh
[2025-11-27 17:40:18] -rw-r--r--. 1 boincer umatlas       100 Nov 27 10:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:40:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 10:11 run_atlas
[2025-11-27 17:40:18] -rw-r--r--. 1 boincer umatlas       105 Nov 27 10:11 job.xml
[2025-11-27 17:40:18] -rw-r--r--. 2 boincer umatlas 410645205 Nov 27 10:11 EVNT.47483658._002211.pool.root.1
[2025-11-27 17:40:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 10:11 start_atlas.sh
[2025-11-27 17:40:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 10:11 shared
[2025-11-27 17:40:18] -rw-r--r--. 2 boincer umatlas    590097 Nov 27 10:11 input.tar.gz
[2025-11-27 17:40:18] -rw-r--r--. 1 boincer umatlas         0 Nov 27 10:11 boinc_lockfile
[2025-11-27 17:40:18] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 10:11 pandaJob.out
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas        57 Nov 27 10:12 setup.sh.local
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas    991580 Nov 27 10:12 agis_schedconf.cvmfs.json
[2025-11-27 17:40:18] drwx------. 5 boincer umatlas      4096 Nov 27 10:12 pilot3
[2025-11-27 17:40:18] -rw-r--r--. 1 boincer umatlas       533 Nov 27 16:17 boinc_task_state.xml
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas 918961007 Nov 27 16:43 HITS.47556161._001942.pool.root.1
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas      1066 Nov 27 16:44 memory_monitor_summary.json
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas   1516240 Nov 27 16:44 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas   1675541 Nov 27 16:44 log.47556161._001942.job.log.tgz.1
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas        95 Nov 27 16:45 pilot_heartbeat.json
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas      8619 Nov 27 16:45 heartbeat.json
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas      4825 Nov 27 16:46 pilotlog.txt
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas   3138787 Nov 27 16:46 log.47556161._001942.job.log.1
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas       353 Nov 27 16:46 output.list
[2025-11-27 17:40:18] -rw-r--r--. 1 boincer umatlas       620 Nov 27 16:46 runtime_log
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas   4833280 Nov 27 16:46 result.tar.gz
[2025-11-27 17:40:18] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 16:46 runtime_log.err
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas       665 Nov 27 16:46 5iyKDmSOBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbPMKDmpJvvmn.diag
[2025-11-27 17:40:18] -rw-r--r--. 1 boincer umatlas      7174 Nov 27 17:39 init_data.xml
[2025-11-27 17:40:18] -rw-r--r--. 1 boincer umatlas        29 Nov 27 17:40 wrapper_checkpoint.txt
[2025-11-27 17:40:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 17:40 boinc_mmap_file
[2025-11-27 17:40:18] -rw-r--r--. 1 boincer umatlas     21862 Nov 27 17:40 stderr.txt
[2025-11-27 17:40:18] HITS file was successfully produced:
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas 918961007 Nov 27 16:43 shared/HITS.pool.root.1
[2025-11-27 17:40:18]  *** Contents of shared directory: ***
[2025-11-27 17:40:18] total 1303772
[2025-11-27 17:40:18] -rw-r--r--. 2 boincer umatlas 410645205 Nov 27 10:11 ATLAS.root_0
[2025-11-27 17:40:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 10:11 start_atlas.sh
[2025-11-27 17:40:18] -rw-r--r--. 2 boincer umatlas    590097 Nov 27 10:11 input.tar.gz
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas 918961007 Nov 27 16:43 HITS.pool.root.1
[2025-11-27 17:40:18] -rw-------. 1 boincer umatlas   4833280 Nov 27 16:46 result.tar.gz
17:40:20 (2901030): run_atlas exited; CPU time 139905.502390
17:40:20 (2901030): called boinc_finish(0)

</stderr_txt>
]]>

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