Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:30:46 (1797617): wrapper (7.7.26015): starting
08:30:46 (1797617): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 08:30:46] Arguments: --nthreads 8
[2025-11-27 08:30:46] Threads: 8
[2025-11-27 08:30:46] Checking for CVMFS
[2025-11-27 08:30:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 08:30:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 08:30:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 08:30:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 08:30:49] 2.13.2.0 8790 37341 258564 153364 2 213 21591420 40960001 10682 16776704 0 37738606 99.666 31688625 39066 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 08:30:49] CVMFS is ok
[2025-11-27 08:30:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 08:30:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 08:30:49] Further information can be found at the LHC@home message board.
[2025-11-27 08:30:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 08:30:49] Checking for apptainer binary...
[2025-11-27 08:30:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 08:30:49] Running /usr/bin/apptainer --version
[2025-11-27 08:30:49] apptainer version 1.4.4-1.el9
[2025-11-27 08:30:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 08:30:49] c-210-33-1.aglt2.org
[2025-11-27 08:30:49] apptainer works
[2025-11-27 08:30:49] Set ATHENA_PROC_NUMBER=8
[2025-11-27 08:30:49] Set ATHENA_CORE_NUMBER=8
[2025-11-27 08:30:49] Starting ATLAS job with PandaID=6898362627
[2025-11-27 08:30:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 04:25:44]  *** The last 200 lines of the pilot log: ***
[2025-11-28 04:25:44] 2025-11-28 09:24:49,231 | INFO     | time since job start (71598s) is within the limit (172800.0s)
[2025-11-28 04:25:44] 2025-11-28 09:24:50,049 | INFO     | monitor loop #4700: job 0:6898362627 is in state 'finished'
[2025-11-28 04:25:44] 2025-11-28 09:24:50,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:25:44] 2025-11-28 09:24:50,296 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 04:25:44] 2025-11-28 09:24:50,311 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2716.532785714285
[2025-11-28 04:25:44] 2025-11-28 09:24:50,324 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6898362627/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 04:25:44] 2025-11-28 09:24:50,325 | INFO     | extracted standard info from prmon json
[2025-11-28 04:25:44] 2025-11-28 09:24:50,326 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 04:25:44] 2025-11-28 09:24:50,326 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 04:25:44] 2025-11-28 09:24:50,350 | INFO     | fitting pss+swap vs Time
[2025-11-28 04:25:44] 2025-11-28 09:24:50,352 | INFO     | sum of square deviations: 499194708683.87305
[2025-11-28 04:25:44] 2025-11-28 09:24:50,384 | INFO     | sum of deviations: 3369219004534.299
[2025-11-28 04:25:44] 2025-11-28 09:24:50,385 | INFO     | mean x: 1764286107.1629694
[2025-11-28 04:25:44] 2025-11-28 09:24:50,385 | INFO     | mean y: 2918423.223549488
[2025-11-28 04:25:44] 2025-11-28 09:24:50,385 | INFO     | intersect: -11904792492.545916
[2025-11-28 04:25:44] 2025-11-28 09:24:50,387 | INFO     | chi2: 13.049007817895518
[2025-11-28 04:25:44] 2025-11-28 09:24:50,389 | INFO     | sum of square deviations: 492833639649.9868
[2025-11-28 04:25:44] 2025-11-28 09:24:50,416 | INFO     | sum of deviations: 3776224051200.386
[2025-11-28 04:25:44] 2025-11-28 09:24:50,417 | INFO     | mean x: 1764285954.6700943
[2025-11-28 04:25:44] 2025-11-28 09:24:50,417 | INFO     | mean y: 2928179.8191945157
[2025-11-28 04:25:44] 2025-11-28 09:24:50,417 | INFO     | intersect: -13515505870.161392
[2025-11-28 04:25:44] 2025-11-28 09:24:50,418 | INFO     | chi2: 9.814551367226278
[2025-11-28 04:25:44] 2025-11-28 09:24:50,418 | INFO     | current chi2=9.814551367226278 (change=24.786991438793375 %)
[2025-11-28 04:25:44] 2025-11-28 09:24:50,418 | INFO     | right removable region: 1166
[2025-11-28 04:25:44] 2025-11-28 09:24:50,419 | INFO     | sum of square deviations: 492832450759.9861
[2025-11-28 04:25:44] 2025-11-28 09:24:50,440 | INFO     | sum of deviations: 2910988334590.8706
[2025-11-28 04:25:44] 2025-11-28 09:24:50,441 | INFO     | mean x: 1764286259.6700943
[2025-11-28 04:25:44] 2025-11-28 09:24:50,441 | INFO     | mean y: 2929405.2827763497
[2025-11-28 04:25:44] 2025-11-28 09:24:50,441 | INFO     | intersect: -10418090381.175632
[2025-11-28 04:25:44] 2025-11-28 09:24:50,443 | INFO     | chi2: 9.173220374903503
[2025-11-28 04:25:44] 2025-11-28 09:24:50,443 | INFO     | current chi2=9.173220374903503 (change=29.701778840815223 %)
[2025-11-28 04:25:44] 2025-11-28 09:24:50,444 | INFO     | sum of square deviations: 486524472923.48047
[2025-11-28 04:25:44] 2025-11-28 09:24:50,492 | INFO     | sum of deviations: 2500817958511.4907
[2025-11-28 04:25:44] 2025-11-28 09:24:50,493 | INFO     | mean x: 1764286412.1772807
[2025-11-28 04:25:44] 2025-11-28 09:24:50,493 | INFO     | mean y: 2939321.973321859
[2025-11-28 04:25:44] 2025-11-28 09:24:50,498 | INFO     | intersect: -9065790801.751993
[2025-11-28 04:25:44] 2025-11-28 09:24:50,500 | INFO     | chi2: 6.180961257535195
[2025-11-28 04:25:44] 2025-11-28 09:24:50,501 | INFO     | current chi2=6.180961257535195 (change=32.61950541987044 %)
[2025-11-28 04:25:44] 2025-11-28 09:24:50,502 | INFO     | sum of square deviations: 480270613252.22174
[2025-11-28 04:25:44] 2025-11-28 09:24:50,579 | INFO     | sum of deviations: 2248498333929.702
[2025-11-28 04:25:44] 2025-11-28 09:24:50,580 | INFO     | mean x: 1764286564.6836646
[2025-11-28 04:25:44] 2025-11-28 09:24:50,580 | INFO     | mean y: 2945470.777873812
[2025-11-28 04:25:44] 2025-11-28 09:24:50,580 | INFO     | intersect: -8256971525.606093
[2025-11-28 04:25:44] 2025-11-28 09:24:50,581 | INFO     | chi2: 5.046273668287685
[2025-11-28 04:25:44] 2025-11-28 09:24:50,581 | INFO     | current chi2=5.046273668287685 (change=18.357785172398792 %)
[2025-11-28 04:25:44] 2025-11-28 09:24:50,581 | INFO     | left removable region: 30
[2025-11-28 04:25:44] 2025-11-28 09:24:50,584 | INFO     | sum of square deviations: 454592525130.3075
[2025-11-28 04:25:44] 2025-11-28 09:24:50,612 | INFO     | sum of deviations: 2531962244374.51
[2025-11-28 04:25:44] 2025-11-28 09:24:50,613 | INFO     | mean x: 1764286839.1892605
[2025-11-28 04:25:44] 2025-11-28 09:24:50,613 | INFO     | mean y: 2963066.0580985914
[2025-11-28 04:25:44] 2025-11-28 09:24:50,613 | INFO     | intersect: -9823656198.729786
[2025-11-28 04:25:44] 2025-11-28 09:24:50,614 | INFO     | chi2: 0.8634675928038384
[2025-11-28 04:25:44] 2025-11-28 09:24:50,615 | INFO     | current memory leak: 5.57 B/s (using 1136 data points, chi2=0.86)
[2025-11-28 04:25:44] 2025-11-28 09:24:50,616 | INFO     | could have reported an average CPU frequency of 2817 MHz (42 samples)
[2025-11-28 04:25:44] 2025-11-28 09:24:50,616 | INFO     | ..............................
[2025-11-28 04:25:44] 2025-11-28 09:24:50,616 | INFO     | . Timing measurements:
[2025-11-28 04:25:44] 2025-11-28 09:24:50,616 | INFO     | . get job = 0 s
[2025-11-28 04:25:44] 2025-11-28 09:24:50,616 | INFO     | . initial setup = 4 s
[2025-11-28 04:25:44] 2025-11-28 09:24:50,616 | INFO     | . payload setup = 28 s
[2025-11-28 04:25:44] 2025-11-28 09:24:50,616 | INFO     | . stage-in = 0 s
[2025-11-28 04:25:44] 2025-11-28 09:24:50,616 | INFO     | . payload execution = 71488 s
[2025-11-28 04:25:44] 2025-11-28 09:24:50,616 | INFO     | . stage-out = 5 s
[2025-11-28 04:25:44] 2025-11-28 09:24:50,617 | INFO     | . log creation = 1 s
[2025-11-28 04:25:44] 2025-11-28 09:24:50,617 | INFO     | ..............................
[2025-11-28 04:25:44] 2025-11-28 09:24:50,744 | INFO     | 
[2025-11-28 04:25:44] 2025-11-28 09:24:50,744 | INFO     | job summary report
[2025-11-28 04:25:44] 2025-11-28 09:24:50,744 | INFO     | --------------------------------------------------
[2025-11-28 04:25:44] 2025-11-28 09:24:50,745 | INFO     | PanDA job id: 6898362627
[2025-11-28 04:25:44] 2025-11-28 09:24:50,745 | INFO     | task id: 47556161
[2025-11-28 04:25:44] 2025-11-28 09:24:50,745 | INFO     | errors: (none)
[2025-11-28 04:25:44] 2025-11-28 09:24:50,745 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 04:25:44] 2025-11-28 09:24:50,745 | INFO     | pilot state: finished 
[2025-11-28 04:25:44] 2025-11-28 09:24:50,745 | INFO     | transexitcode: 0
[2025-11-28 04:25:44] 2025-11-28 09:24:50,745 | INFO     | exeerrorcode: 0
[2025-11-28 04:25:44] 2025-11-28 09:24:50,745 | INFO     | exeerrordiag: 
[2025-11-28 04:25:44] 2025-11-28 09:24:50,745 | INFO     | exitcode: 0
[2025-11-28 04:25:44] 2025-11-28 09:24:50,745 | INFO     | exitmsg: OK
[2025-11-28 04:25:44] 2025-11-28 09:24:50,745 | INFO     | cpuconsumptiontime: 251437 s
[2025-11-28 04:25:44] 2025-11-28 09:24:50,745 | INFO     | nevents: 1000
[2025-11-28 04:25:44] 2025-11-28 09:24:50,745 | INFO     | neventsw: 0
[2025-11-28 04:25:44] 2025-11-28 09:24:50,746 | INFO     | pid: 1821347
[2025-11-28 04:25:44] 2025-11-28 09:24:50,746 | INFO     | pgrp: 1821347
[2025-11-28 04:25:44] 2025-11-28 09:24:50,746 | INFO     | corecount: 8
[2025-11-28 04:25:44] 2025-11-28 09:24:50,746 | INFO     | event service: False
[2025-11-28 04:25:44] 2025-11-28 09:24:50,746 | INFO     | sizes: {0: 2284093, 1: 2284292, 12: 2284292, 19: 2284582, 23: 2284610, 71521: 2344189, 71527: 2353183, 71528: 2353239, 71551: 2353485}
[2025-11-28 04:25:44] 2025-11-28 09:24:50,746 | INFO     | --------------------------------------------------
[2025-11-28 04:25:44] 2025-11-28 09:24:50,746 | INFO     | 
[2025-11-28 04:25:44] 2025-11-28 09:24:50,746 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-28 04:25:44] 2025-11-28 09:24:50,836 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,836 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,836 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,836 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,837 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,837 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,837 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,837 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,838 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 04:25:44] 2025-11-28 09:24:50,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,838 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 04:25:44] 2025-11-28 09:24:50,838 | INFO     | job 6898362627 has completed (purged errors)
[2025-11-28 04:25:44] 2025-11-28 09:24:50,838 | INFO     | overall cleanup function is called
[2025-11-28 04:25:44] 2025-11-28 09:24:51,876 | INFO     | --- collectZombieJob: --- 10, [1821347]
[2025-11-28 04:25:44] 2025-11-28 09:24:51,876 | INFO     | zombie collector waiting for pid 1821347
[2025-11-28 04:25:44] 2025-11-28 09:24:51,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 04:25:44] 2025-11-28 09:24:51,877 | INFO     | collected zombie processes
[2025-11-28 04:25:44] 2025-11-28 09:24:51,877 | INFO     | will attempt to kill all subprocesses of pid=1821347
[2025-11-28 04:25:44] 2025-11-28 09:24:52,434 | INFO     | process IDs to be killed: [1821347] (in reverse order)
[2025-11-28 04:25:44] 2025-11-28 09:24:52,556 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 04:25:44] 2025-11-28 09:24:52,556 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 04:25:44] 2025-11-28 09:24:52,574 | INFO     | did not find any defunct processes belonging to 1821347
[2025-11-28 04:25:44] 2025-11-28 09:24:52,596 | INFO     | did not find any defunct processes belonging to 1821347
[2025-11-28 04:25:44] 2025-11-28 09:24:52,597 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 04:25:44] 2025-11-28 09:24:52,598 | INFO     | ready for new job
[2025-11-28 04:25:44] 2025-11-28 09:24:52,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 04:25:44] 2025-11-28 09:24:52,603 | INFO     | ***************************************
[2025-11-28 04:25:44] 2025-11-28 09:24:52,604 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 04:25:44] 2025-11-28 09:24:52,604 | INFO     | ***************************************
[2025-11-28 04:25:44] 2025-11-28 09:24:52,604 | INFO     | 
[2025-11-28 04:25:44] 2025-11-28 09:24:52,607 | INFO     | architecture information:
[2025-11-28 04:25:44] 2025-11-28 09:24:52,607 | INFO     | executing command: cat /etc/os-release
[2025-11-28 04:25:44] 2025-11-28 09:24:52,630 | INFO     | cat /etc/os-release:
[2025-11-28 04:25:44] NAME="CentOS Linux"
[2025-11-28 04:25:44] VERSION="7 (Core)"
[2025-11-28 04:25:44] ID="centos"
[2025-11-28 04:25:44] ID_LIKE="rhel fedora"
[2025-11-28 04:25:44] VERSION_ID="7"
[2025-11-28 04:25:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 04:25:44] ANSI_COLOR="0;31"
[2025-11-28 04:25:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 04:25:44] HOME_URL="https://www.centos.org/"
[2025-11-28 04:25:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 04:25:44] 
[2025-11-28 04:25:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 04:25:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 04:25:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 04:25:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 04:25:44] 
[2025-11-28 04:25:44] 2025-11-28 09:24:52,631 | INFO     | ***************************************
[2025-11-28 04:25:44] 2025-11-28 09:24:53,134 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-28 04:25:44] 2025-11-28 09:24:53,277 | INFO     | sufficient remaining disk space (67359473664 B)
[2025-11-28 04:25:44] 2025-11-28 09:24:53,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 04:25:44] 2025-11-28 09:24:53,277 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 04:25:44] 2025-11-28 09:24:53,277 | INFO     | update_server=False
[2025-11-28 04:25:44] 2025-11-28 09:24:53,277 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 04:25:44] 2025-11-28 09:24:53,278 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 04:25:44] 2025-11-28 09:24:53,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:25:44] 2025-11-28 09:24:53,589 | INFO     | aborting loop
[2025-11-28 04:25:44] 2025-11-28 09:24:53,769 | INFO     | all data control threads have been joined
[2025-11-28 04:25:44] 2025-11-28 09:24:53,866 | INFO     | all job control threads have been joined
[2025-11-28 04:25:44] 2025-11-28 09:24:54,235 | INFO     | all payload control threads have been joined
[2025-11-28 04:25:44] 2025-11-28 09:24:54,283 | INFO     | [job] retrieve thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:24:54,606 | INFO     | [job] job monitor thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:24:54,775 | INFO     | [data] control thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:24:54,855 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:24:54,872 | INFO     | [job] control thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:24:54,877 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:24:55,242 | INFO     | [payload] control thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:24:55,290 | INFO     | [data] copytool_out thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:24:55,456 | INFO     | [data] copytool_in thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:24:55,611 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:24:55,620 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:24:55,658 | INFO     | [job] validate thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:24:55,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:25:44] 2025-11-28 09:24:55,775 | INFO     | [payload] validate_post thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:24:55,776 | INFO     | [payload] failed_post thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:24:56,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 04:25:44] 2025-11-28 09:24:56,771 | INFO     | [job] queue monitor thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:25:00,358 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 04:25:44] 2025-11-28 09:25:23,416 | INFO     | PID=1802422 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 04:25:44] 2025-11-28 09:25:23,416 | INFO     | .. there are 13 such processes running
[2025-11-28 04:25:44] 2025-11-28 09:25:23,417 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 04:25:44] 2025-11-28 09:25:23,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 04:25:44] 2025-11-28 09:25:23,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 04:25:44] 2025-11-28 09:25:36,669 | INFO     | [monitor] cgroup control has ended
[2025-11-28 04:25:44] 2025-11-28 09:25:38,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139977727260480)>', '<ExcThread(monitor, started 139977363003136)>']
[2025-11-28 04:25:44] 2025-11-28 09:25:38,505 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 04:25:44] 2025-11-28 09:25:38,505 | INFO     | [monitor] control thread has ended
[2025-11-28 04:25:44] 2025-11-28 09:25:43,345 | INFO     | all workflow threads have been joined
[2025-11-28 04:25:44] 2025-11-28 09:25:43,346 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 04:25:44] 2025-11-28 09:25:43,346 | INFO     | traces error code: 0
[2025-11-28 04:25:44] 2025-11-28 09:25:43,346 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 04:25:44] 2025-11-28 09:25:44,121 [wrapper] ==== pilot stdout END ====
[2025-11-28 04:25:44] 2025-11-28 09:25:44,137 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 04:25:44] 2025-11-28 09:25:44,152 [wrapper] pilotpid: 1802422
[2025-11-28 04:25:44] 2025-11-28 09:25:44,167 [wrapper] Pilot exit status: 0
[2025-11-28 04:25:44] 2025-11-28 09:25:44,271 [wrapper] pandaids: 6898362627
[2025-11-28 04:25:44] 2025-11-28 09:25:44,506 [wrapper] cleanup supervisor_pilot 1256754 1802423
[2025-11-28 04:25:44] 2025-11-28 09:25:44,509 [wrapper] Test setup, not cleaning
[2025-11-28 04:25:44] 2025-11-28 09:25:44,518 [wrapper] apfmon messages muted
[2025-11-28 04:25:44] 2025-11-28 09:25:44,522 [wrapper] ==== wrapper stdout END ====
[2025-11-28 04:25:44] 2025-11-28 09:25:44,525 [wrapper] ==== wrapper stderr END ====
[2025-11-28 04:25:44]  *** Error codes and diagnostics ***
[2025-11-28 04:25:44]     "exeErrorCode": 0,
[2025-11-28 04:25:44]     "exeErrorDiag": "",
[2025-11-28 04:25:44]     "pilotErrorCode": 0,
[2025-11-28 04:25:44]     "pilotErrorDiag": "",
[2025-11-28 04:25:44]  *** Listing of results directory ***
[2025-11-28 04:25:44] total 1322444
[2025-11-28 04:25:44] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 10:44 queuedata.json
[2025-11-28 04:25:44] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 10:45 pilot3.tar.gz
[2025-11-28 04:25:44] -rwx------. 1 boincer umatlas     36292 Nov 26 10:46 runpilot2-wrapper.sh
[2025-11-28 04:25:44] -rw-r--r--. 1 boincer umatlas       100 Nov 27 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 04:25:44] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 08:30 run_atlas
[2025-11-28 04:25:44] -rw-r--r--. 1 boincer umatlas       105 Nov 27 08:30 job.xml
[2025-11-28 04:25:44] -rw-r--r--. 2 boincer umatlas 410787904 Nov 27 08:30 EVNT.47483658._002553.pool.root.1
[2025-11-28 04:25:44] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 08:30 start_atlas.sh
[2025-11-28 04:25:44] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 08:30 shared
[2025-11-28 04:25:44] -rw-r--r--. 2 boincer umatlas    590100 Nov 27 08:30 input.tar.gz
[2025-11-28 04:25:44] -rw-r--r--. 1 boincer umatlas         0 Nov 27 08:30 boinc_lockfile
[2025-11-28 04:25:44] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 08:30 pandaJob.out
[2025-11-28 04:25:44] -rw-------. 1 boincer umatlas        57 Nov 27 08:30 setup.sh.local
[2025-11-28 04:25:44] -rw-------. 1 boincer umatlas    991566 Nov 27 08:31 agis_schedconf.cvmfs.json
[2025-11-28 04:25:44] drwx------. 5 boincer umatlas      4096 Nov 27 08:31 pilot3
[2025-11-28 04:25:44] -rw-r--r--. 1 boincer umatlas       533 Nov 28 04:11 boinc_task_state.xml
[2025-11-28 04:25:44] -rw-r--r--. 1 boincer umatlas      6843 Nov 28 04:20 init_data.xml
[2025-11-28 04:25:44] -rw-------. 1 boincer umatlas 915675241 Nov 28 04:23 HITS.47556161._005357.pool.root.1
[2025-11-28 04:25:44] -rw-------. 1 boincer umatlas      1058 Nov 28 04:24 memory_monitor_summary.json
[2025-11-28 04:25:44] -rw-------. 1 boincer umatlas   1516240 Nov 28 04:24 agis_ddmendpoints.agis.ALL.json
[2025-11-28 04:25:44] -rw-------. 1 boincer umatlas   2319545 Nov 28 04:24 log.47556161._005357.job.log.tgz.1
[2025-11-28 04:25:44] -rw-------. 1 boincer umatlas        95 Nov 28 04:24 pilot_heartbeat.json
[2025-11-28 04:25:44] -rw-------. 1 boincer umatlas      8618 Nov 28 04:24 heartbeat.json
[2025-11-28 04:25:44] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 04:25 boinc_mmap_file
[2025-11-28 04:25:44] -rw-r--r--. 1 boincer umatlas        29 Nov 28 04:25 wrapper_checkpoint.txt
[2025-11-28 04:25:44] -rw-------. 1 boincer umatlas      4824 Nov 28 04:25 pilotlog.txt
[2025-11-28 04:25:44] -rw-------. 1 boincer umatlas   9576960 Nov 28 04:25 log.47556161._005357.job.log.1
[2025-11-28 04:25:44] -rw-------. 1 boincer umatlas       353 Nov 28 04:25 output.list
[2025-11-28 04:25:44] -rw-r--r--. 1 boincer umatlas       620 Nov 28 04:25 runtime_log
[2025-11-28 04:25:44] -rw-------. 1 boincer umatlas  11919360 Nov 28 04:25 result.tar.gz
[2025-11-28 04:25:44] -rw-------. 1 boincer umatlas       662 Nov 28 04:25 txUKDm9tWi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3zJKDm114Uhm.diag
[2025-11-28 04:25:44] -rw-r--r--. 1 boincer umatlas      9353 Nov 28 04:25 runtime_log.err
[2025-11-28 04:25:44] -rw-r--r--. 1 boincer umatlas     21357 Nov 28 04:25 stderr.txt
[2025-11-28 04:25:44] HITS file was successfully produced:
[2025-11-28 04:25:44] -rw-------. 1 boincer umatlas 915675241 Nov 28 04:23 shared/HITS.pool.root.1
[2025-11-28 04:25:44]  *** Contents of shared directory: ***
[2025-11-28 04:25:45] total 1307620
[2025-11-28 04:25:45] -rw-r--r--. 2 boincer umatlas 410787904 Nov 27 08:30 ATLAS.root_0
[2025-11-28 04:25:45] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 08:30 start_atlas.sh
[2025-11-28 04:25:45] -rw-r--r--. 2 boincer umatlas    590100 Nov 27 08:30 input.tar.gz
[2025-11-28 04:25:45] -rw-------. 1 boincer umatlas 915675241 Nov 28 04:23 HITS.pool.root.1
[2025-11-28 04:25:45] -rw-------. 1 boincer umatlas  11919360 Nov 28 04:25 result.tar.gz
04:25:46 (1797617): run_atlas exited; CPU time 252466.293135
04:25:46 (1797617): called boinc_finish(0)

</stderr_txt>
]]>

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