Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
17:41:02 (1659537): wrapper (7.7.26015): starting
17:41:02 (1659537): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 17:41:02] Arguments: --nthreads 12
[2025-11-27 17:41:02] Threads: 12
[2025-11-27 17:41:02] Checking for CVMFS
[2025-11-27 17:41:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 17:41:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 17:41:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 17:41:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 17:41:02] 2.13.2.0 2113 2959 46912 153377 0 89 3049577 4096001 676 130560 0 5778055 99.994 133561 733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 17:41:02] CVMFS is ok
[2025-11-27 17:41:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 17:41:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 17:41:02] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 17:41:02] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 17:41:02] Further information can be found at the LHC@home message board.
[2025-11-27 17:41:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 17:41:02] Checking for apptainer binary...
[2025-11-27 17:41:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 17:41:02] Running /usr/bin/apptainer --version
[2025-11-27 17:41:02] apptainer version 1.4.3
[2025-11-27 17:41:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 17:41:02] test-run
[2025-11-27 17:41:02] apptainer works
[2025-11-27 17:41:02] Set ATHENA_PROC_NUMBER=12
[2025-11-27 17:41:02] Set ATHENA_CORE_NUMBER=12
[2025-11-27 17:41:02] Starting ATLAS job with PandaID=6897998761
[2025-11-27 17:41:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:39:22]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:39:22] 2025-11-27 19:38:39,125 | INFO     | sum of square deviations: 483971865.0
[2025-11-27 19:39:22] 2025-11-27 19:38:39,125 | INFO     | sum of deviations: 69950210390.5
[2025-11-27 19:39:22] 2025-11-27 19:38:39,125 | INFO     | mean x: 1764268790.5
[2025-11-27 19:39:22] 2025-11-27 19:38:39,125 | INFO     | mean y: 3143250.0086206896
[2025-11-27 19:39:22] 2025-11-27 19:38:39,125 | INFO     | intersect: -254993029060.27222
[2025-11-27 19:39:22] 2025-11-27 19:38:39,125 | INFO     | chi2: 9.252837150331612
[2025-11-27 19:39:22] 2025-11-27 19:38:39,125 | INFO     | sum of square deviations: 424045160.0
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | sum of deviations: 111471491683.00002
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | mean x: 1764268638.0
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | mean y: 3248385.7117117117
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | intersect: -463781450412.39453
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | chi2: 5.717871313690739
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | current chi2=5.717871313690739 (change=38.204128952103986 %)
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | sum of square deviations: 369281342.5
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | sum of deviations: 104093564252.99998
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | mean x: 1764268485.5
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | mean y: 3227836.169811321
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | intersect: -497311350018.3483
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | chi2: 5.6914631844713215
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | current chi2=5.6914631844713215 (change=0.46185245820741644 %)
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | right removable region: 105
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | sum of square deviations: 424045160.0
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | sum of deviations: 26044356503.999977
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | mean x: 1764268943.0
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | mean y: 3254752.7837837837
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | intersect: -108356074995.08368
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | chi2: 5.908863839164311
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | current chi2=5.908863839164311 (change=36.13997800715056 %)
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | sum of square deviations: 369281342.5
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | sum of deviations: -11119912375.499992
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | mean x: 1764269095.5
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | mean y: 3358231.632075472
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | intersect: 53129567143.100784
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | chi2: 3.7481090310724308
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | current chi2=3.7481090310724308 (change=36.568025036729814 %)
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | sum of square deviations: 319447850.0
[2025-11-27 19:39:22] 2025-11-27 19:38:39,126 | INFO     | sum of deviations: -17904933072.999992
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | mean x: 1764269248.0
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | mean y: 3378812.5346534653
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | intersect: 98890013385.88371
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | chi2: 3.693817745335074
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | current chi2=3.693817745335074 (change=1.4484980369373843 %)
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | left removable region: 30
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | sum of square deviations: 130793150.0
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | sum of deviations: 8597354335.000002
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | mean x: 1764269370.0
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | mean y: 3550236.28
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | intersect: -115966199833.02579
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | chi2: 0.0025575488950781355
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | current memory leak: 65.73 B/s (using 75 data points, chi2=0.00)
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | could have reported an average CPU frequency of 4299 MHz (7 samples)
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | ..............................
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | . Timing measurements:
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | . get job = 0 s
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | . initial setup = 2 s
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | . payload setup = 1 s
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | . stage-in = 0 s
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | . payload execution = 7028 s
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | . stage-out = 0 s
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | . log creation = 0 s
[2025-11-27 19:39:22] 2025-11-27 19:38:39,127 | INFO     | ..............................
[2025-11-27 19:39:22] 2025-11-27 19:38:39,144 | INFO     | 
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | job summary report
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | --------------------------------------------------
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | PanDA job id: 6897998761
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | task id: 47556161
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | errors: (none)
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | pilot state: finished 
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | transexitcode: 0
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | exeerrorcode: 0
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | exeerrordiag: 
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | exitcode: 0
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | exitmsg: OK
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | cpuconsumptiontime: 74257 s
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | nevents: 1000
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | neventsw: 0
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | pid: 1670052
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | pgrp: 1670052
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | corecount: 12
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | event service: False
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | sizes: {0: 2284271, 1: 2284533, 11: 2284561, 7033: 2312893, 7034: 2321956, 7037: 2321956, 7040: 2322330}
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | --------------------------------------------------
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | 
[2025-11-27 19:39:22] 2025-11-27 19:38:39,145 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-27 19:39:22] 2025-11-27 19:38:39,149 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | job 6897998761 has completed (purged errors)
[2025-11-27 19:39:22] 2025-11-27 19:38:39,150 | INFO     | overall cleanup function is called
[2025-11-27 19:39:22] 2025-11-27 19:38:40,159 | INFO     | --- collectZombieJob: --- 10, [1670052]
[2025-11-27 19:39:22] 2025-11-27 19:38:40,159 | INFO     | zombie collector waiting for pid 1670052
[2025-11-27 19:39:22] 2025-11-27 19:38:40,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:39:22] 2025-11-27 19:38:40,159 | INFO     | collected zombie processes
[2025-11-27 19:39:22] 2025-11-27 19:38:40,159 | INFO     | will attempt to kill all subprocesses of pid=1670052
[2025-11-27 19:39:22] 2025-11-27 19:38:40,173 | INFO     | process IDs to be killed: [1670052] (in reverse order)
[2025-11-27 19:39:22] 2025-11-27 19:38:40,182 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:39:22] 2025-11-27 19:38:40,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:39:22] 2025-11-27 19:38:40,183 | INFO     | did not find any defunct processes belonging to 1670052
[2025-11-27 19:39:22] 2025-11-27 19:38:40,183 | INFO     | did not find any defunct processes belonging to 1670052
[2025-11-27 19:39:22] 2025-11-27 19:38:40,183 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:39:22] 2025-11-27 19:38:40,183 | INFO     | ready for new job
[2025-11-27 19:39:22] 2025-11-27 19:38:40,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:39:22] 2025-11-27 19:38:40,184 | INFO     | ***************************************
[2025-11-27 19:39:22] 2025-11-27 19:38:40,184 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:39:22] 2025-11-27 19:38:40,184 | INFO     | ***************************************
[2025-11-27 19:39:22] 2025-11-27 19:38:40,184 | INFO     | 
[2025-11-27 19:39:22] 2025-11-27 19:38:40,184 | INFO     | pilot is running in a VM
[2025-11-27 19:39:22] 2025-11-27 19:38:40,184 | INFO     | architecture information:
[2025-11-27 19:39:22] 2025-11-27 19:38:40,184 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:39:22] 2025-11-27 19:38:40,187 | INFO     | cat /etc/os-release:
[2025-11-27 19:39:22] NAME="CentOS Linux"
[2025-11-27 19:39:22] VERSION="7 (Core)"
[2025-11-27 19:39:22] ID="centos"
[2025-11-27 19:39:22] ID_LIKE="rhel fedora"
[2025-11-27 19:39:22] VERSION_ID="7"
[2025-11-27 19:39:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:39:22] ANSI_COLOR="0;31"
[2025-11-27 19:39:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:39:22] HOME_URL="https://www.centos.org/"
[2025-11-27 19:39:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:39:22] 
[2025-11-27 19:39:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:39:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:39:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:39:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:39:22] 
[2025-11-27 19:39:22] 2025-11-27 19:38:40,187 | INFO     | ***************************************
[2025-11-27 19:39:22] 2025-11-27 19:38:40,690 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-27 19:39:22] 2025-11-27 19:38:40,695 | INFO     | sufficient remaining disk space (70356303872 B)
[2025-11-27 19:39:22] 2025-11-27 19:38:40,695 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:39:22] 2025-11-27 19:38:40,695 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:39:22] 2025-11-27 19:38:40,695 | INFO     | update_server=False
[2025-11-27 19:39:22] 2025-11-27 19:38:40,695 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:39:22] 2025-11-27 19:38:40,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:39:22] 2025-11-27 19:38:40,731 | INFO     | all data control threads have been joined
[2025-11-27 19:39:22] 2025-11-27 19:38:40,887 | INFO     | all job control threads have been joined
[2025-11-27 19:39:22] 2025-11-27 19:38:41,162 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 19:39:22] 2025-11-27 19:38:41,162 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 19:39:22] 2025-11-27 19:38:41,162 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:39:22] 2025-11-27 19:38:41,162 | INFO     | will abort loop
[2025-11-27 19:39:22] 2025-11-27 19:38:41,555 | INFO     | all payload control threads have been joined
[2025-11-27 19:39:22] 2025-11-27 19:38:41,700 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:41,700 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:41,736 | INFO     | [data] control thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:41,799 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:41,892 | INFO     | [job] control thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:42,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:39:22] 2025-11-27 19:38:42,167 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:42,211 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:42,560 | INFO     | [payload] control thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:42,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:39:22] 2025-11-27 19:38:42,643 | INFO     | [job] validate thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:42,709 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:42,726 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:42,980 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:43,131 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:44,073 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:46,626 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:38:51,142 | INFO     | job.realtimelogging is not enabled
[2025-11-27 19:39:22] 2025-11-27 19:38:52,147 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:39:22] 2025-11-27 19:39:10,462 | INFO     | PID=1663394 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:39:22] 2025-11-27 19:39:10,462 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:39:22] 2025-11-27 19:39:10,462 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:39:22] 2025-11-27 19:39:10,462 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:39:22] 2025-11-27 19:39:16,029 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:39:22] 2025-11-27 19:39:17,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133065549588288)>', '<ExcThread(monitor, started 133064915146496)>']
[2025-11-27 19:39:22] 2025-11-27 19:39:17,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:39:22] 2025-11-27 19:39:17,497 | INFO     | [monitor] control thread has ended
[2025-11-27 19:39:22] 2025-11-27 19:39:22,239 | INFO     | all workflow threads have been joined
[2025-11-27 19:39:22] 2025-11-27 19:39:22,239 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:39:22] 2025-11-27 19:39:22,240 | INFO     | traces error code: 0
[2025-11-27 19:39:22] 2025-11-27 19:39:22,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:39:22] 2025-11-27 19:39:22,265 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:39:22] 2025-11-27 19:39:22,265 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:39:22] 2025-11-27 19:39:22,266 [wrapper] pilotpid: 1663394
[2025-11-27 19:39:22] 2025-11-27 19:39:22,266 [wrapper] Pilot exit status: 0
[2025-11-27 19:39:22] 2025-11-27 19:39:22,268 [wrapper] pandaids: 6897998761
[2025-11-27 19:39:22] 2025-11-27 19:39:22,274 [wrapper] cleanup supervisor_pilot 1693539 1663395
[2025-11-27 19:39:22] 2025-11-27 19:39:22,274 [wrapper] Test setup, not cleaning
[2025-11-27 19:39:22] 2025-11-27 19:39:22,275 [wrapper] apfmon messages muted
[2025-11-27 19:39:22] 2025-11-27 19:39:22,275 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:39:22] 2025-11-27 19:39:22,276 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:39:22]  *** Error codes and diagnostics ***
[2025-11-27 19:39:22]     "exeErrorCode": 0,
[2025-11-27 19:39:22]     "exeErrorDiag": "",
[2025-11-27 19:39:22]     "pilotErrorCode": 0,
[2025-11-27 19:39:22]     "pilotErrorDiag": "",
[2025-11-27 19:39:22]  *** Listing of results directory ***
[2025-11-27 19:39:22] total 1290708
[2025-11-27 19:39:22] -rw-r--r-- 1 boinc boinc    576529 Nov 26 01:44 pilot3.tar.gz
[2025-11-27 19:39:22] -rwx------ 1 boinc boinc     36292 Nov 26 02:32 runpilot2-wrapper.sh
[2025-11-27 19:39:22] -rw-r--r-- 1 boinc boinc      5112 Nov 26 02:32 queuedata.json
[2025-11-27 19:39:22] -rw-r--r-- 1 boinc boinc       100 Nov 27 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:39:22] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 17:41 run_atlas
[2025-11-27 19:39:22] -rw-r--r-- 1 boinc boinc       105 Nov 27 17:41 job.xml
[2025-11-27 19:39:22] -rw-r--r-- 2 boinc boinc     15847 Nov 27 17:41 start_atlas.sh
[2025-11-27 19:39:22] drwxrwx--x 2 boinc boinc      4096 Nov 27 17:41 shared
[2025-11-27 19:39:22] -rw-r--r-- 2 boinc boinc    590107 Nov 27 17:41 input.tar.gz
[2025-11-27 19:39:22] -rw-r--r-- 1 boinc boinc      6943 Nov 27 17:41 init_data.xml
[2025-11-27 19:39:22] -rw-r--r-- 2 boinc boinc 410752273 Nov 27 17:41 EVNT.47483658._002379.pool.root.1
[2025-11-27 19:39:22] -rw-r--r-- 1 boinc boinc         0 Nov 27 17:41 boinc_lockfile
[2025-11-27 19:39:22] -rw-r--r-- 1 boinc boinc      2785 Nov 27 17:41 pandaJob.out
[2025-11-27 19:39:22] -rw------- 1 boinc boinc    991231 Nov 27 17:41 agis_schedconf.cvmfs.json
[2025-11-27 19:39:22] -rw------- 1 boinc boinc   1516240 Nov 27 17:41 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:39:22] drwx------ 5 boinc boinc      4096 Nov 27 17:41 pilot3
[2025-11-27 19:39:22] -rw-r--r-- 1 boinc boinc       530 Nov 27 19:33 boinc_task_state.xml
[2025-11-27 19:39:22] -rw------- 1 boinc boinc 901211957 Nov 27 19:38 HITS.47556161._003615.pool.root.1
[2025-11-27 19:39:22] -rw------- 1 boinc boinc      1034 Nov 27 19:38 memory_monitor_summary.json
[2025-11-27 19:39:22] -rw------- 1 boinc boinc   1839167 Nov 27 19:38 log.47556161._003615.job.log.tgz.1
[2025-11-27 19:39:22] -rw------- 1 boinc boinc        95 Nov 27 19:38 pilot_heartbeat.json
[2025-11-27 19:39:22] -rw------- 1 boinc boinc      8560 Nov 27 19:38 heartbeat.json
[2025-11-27 19:39:22] -rw-r--r-- 1 boinc boinc      8192 Nov 27 19:39 boinc_mmap_file
[2025-11-27 19:39:22] -rw-r--r-- 1 boinc boinc        27 Nov 27 19:39 wrapper_checkpoint.txt
[2025-11-27 19:39:22] -rw------- 1 boinc boinc      5075 Nov 27 19:39 pilotlog.txt
[2025-11-27 19:39:22] -rw------- 1 boinc boinc   1063020 Nov 27 19:39 log.47556161._003615.job.log.1
[2025-11-27 19:39:22] -rw------- 1 boinc boinc       353 Nov 27 19:39 output.list
[2025-11-27 19:39:22] -rw-r--r-- 1 boinc boinc       620 Nov 27 19:39 runtime_log
[2025-11-27 19:39:22] -rw------- 1 boinc boinc   2918400 Nov 27 19:39 result.tar.gz
[2025-11-27 19:39:22] -rw------- 1 boinc boinc       647 Nov 27 19:39 yRjLDm0VKi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCkMKDm5rcbLn.diag
[2025-11-27 19:39:22] -rw-r--r-- 1 boinc boinc      8890 Nov 27 19:39 runtime_log.err
[2025-11-27 19:39:22] -rw-r--r-- 1 boinc boinc     21232 Nov 27 19:39 stderr.txt
[2025-11-27 19:39:22] HITS file was successfully produced:
[2025-11-27 19:39:22] -rw------- 1 boinc boinc 901211957 Nov 27 19:38 shared/HITS.pool.root.1
[2025-11-27 19:39:22]  *** Contents of shared directory: ***
[2025-11-27 19:39:22] total 1284676
[2025-11-27 19:39:22] -rw-r--r-- 2 boinc boinc     15847 Nov 27 17:41 start_atlas.sh
[2025-11-27 19:39:22] -rw-r--r-- 2 boinc boinc    590107 Nov 27 17:41 input.tar.gz
[2025-11-27 19:39:22] -rw-r--r-- 2 boinc boinc 410752273 Nov 27 17:41 ATLAS.root_0
[2025-11-27 19:39:22] -rw------- 1 boinc boinc 901211957 Nov 27 19:38 HITS.pool.root.1
[2025-11-27 19:39:22] -rw------- 1 boinc boinc   2918400 Nov 27 19:39 result.tar.gz
19:39:24 (1659537): run_atlas exited; CPU time 74203.362074
19:39:24 (1659537): called boinc_finish(0)

</stderr_txt>
]]>

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