Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
15:09:57 (1579098): wrapper (7.7.26015): starting
15:09:57 (1579098): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 15:09:57] Arguments: --nthreads 12
[2025-11-27 15:09:57] Threads: 12
[2025-11-27 15:09:57] Checking for CVMFS
[2025-11-27 15:09:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 15:09:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 15:09:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 15:09:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 15:09:58] 2.13.2.0 2113 2808 46036 153370 3 56 3005393 4096000 1042 130560 0 5490564 99.994 124119 733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 15:09:58] CVMFS is ok
[2025-11-27 15:09:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 15:09:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 15:09:58] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 15:09:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 15:09:58] Further information can be found at the LHC@home message board.
[2025-11-27 15:09:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 15:09:58] Checking for apptainer binary...
[2025-11-27 15:09:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 15:09:58] Running /usr/bin/apptainer --version
[2025-11-27 15:09:58] apptainer version 1.4.3
[2025-11-27 15:09:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 15:09:58] test-run
[2025-11-27 15:09:58] apptainer works
[2025-11-27 15:09:58] Set ATHENA_PROC_NUMBER=12
[2025-11-27 15:09:58] Set ATHENA_CORE_NUMBER=12
[2025-11-27 15:09:58] Starting ATLAS job with PandaID=6898271598
[2025-11-27 15:09:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:38:24]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:38:24] 2025-11-27 17:37:53,647 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | sum of square deviations: 945282840.0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | sum of deviations: 113757226038.00002
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | mean x: 1764260612.0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | mean y: 3267503.751724138
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | intersect: -212311380278.51868
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | chi2: 8.10482787780295
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | sum of square deviations: 850825255.0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | sum of deviations: 150377286589.49994
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | mean x: 1764260459.5
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | mean y: 3325925.7928571426
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | intersect: -311817108620.14026
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | chi2: 5.979322919843672
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | current chi2=5.979322919843672 (change=26.225170848852848 %)
[2025-11-27 17:38:24] 2025-11-27 17:37:53,648 | INFO     | sum of square deviations: 762879420.0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | sum of deviations: 142497555805.00003
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | mean x: 1764260307.0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | mean y: 3312258.933333333
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | intersect: -329541272324.6683
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | chi2: 5.972768964725136
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | current chi2=5.972768964725136 (change=0.10961032221199829 %)
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | right removable region: 134
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | sum of square deviations: 850825255.0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | sum of deviations: 55943958513.99997
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | mean x: 1764260764.5
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | mean y: 3360705.8857142855
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | intersect: -116001342301.03886
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | chi2: 4.62910762842538
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | current chi2=4.62910762842538 (change=42.88456586347354 %)
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | sum of square deviations: 762879420.0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | sum of deviations: 6186578215.0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | mean x: 1764260917.0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | mean y: 3446970.3851851854
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | intersect: -14303844416.093851
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | chi2: 2.2951150818161548
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | current chi2=2.2951150818161548 (change=50.419923967141536 %)
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | sum of square deviations: 681212772.5
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | sum of deviations: -2488606629.999996
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | mean x: 1764261069.5
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | mean y: 3463044.2615384613
[2025-11-27 17:38:24] 2025-11-27 17:37:53,649 | INFO     | intersect: 6448661918.756488
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | chi2: 2.242726605355438
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | current chi2=2.242726605355438 (change=2.2826078254542717 %)
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | left removable region: 30
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | sum of square deviations: 348769330.0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | sum of deviations: 17576324700.5
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | mean x: 1764261191.5
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | mean y: 3562321.1826923075
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | intersect: -88906857520.7656
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | chi2: 0.002209681471841177
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | current memory leak: 50.40 B/s (using 104 data points, chi2=0.00)
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | could have reported an average CPU frequency of 4299 MHz (8 samples)
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | ..............................
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | . Timing measurements:
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | . get job = 0 s
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | . initial setup = 2 s
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | . payload setup = 1 s
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | . stage-in = 0 s
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | . payload execution = 8845 s
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | . stage-out = 0 s
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | . log creation = 0 s
[2025-11-27 17:38:24] 2025-11-27 17:37:53,650 | INFO     | ..............................
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | 
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | job summary report
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | --------------------------------------------------
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | PanDA job id: 6898271598
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | task id: 47556161
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | errors: (none)
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | pilot state: finished 
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | transexitcode: 0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | exeerrorcode: 0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | exeerrordiag: 
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | exitcode: 0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | exitmsg: OK
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | cpuconsumptiontime: 95989 s
[2025-11-27 17:38:24] 2025-11-27 17:37:53,667 | INFO     | nevents: 1000
[2025-11-27 17:38:24] 2025-11-27 17:37:53,668 | INFO     | neventsw: 0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,668 | INFO     | pid: 1589614
[2025-11-27 17:38:24] 2025-11-27 17:37:53,668 | INFO     | pgrp: 1589614
[2025-11-27 17:38:24] 2025-11-27 17:37:53,668 | INFO     | corecount: 12
[2025-11-27 17:38:24] 2025-11-27 17:37:53,668 | INFO     | event service: False
[2025-11-27 17:38:24] 2025-11-27 17:37:53,668 | INFO     | sizes: {0: 2284322, 2: 2284584, 11: 2284612, 8850: 2313899, 8851: 2322907, 8852: 2322963, 8857: 2323337}
[2025-11-27 17:38:24] 2025-11-27 17:37:53,668 | INFO     | --------------------------------------------------
[2025-11-27 17:38:24] 2025-11-27 17:37:53,668 | INFO     | 
[2025-11-27 17:38:24] 2025-11-27 17:37:53,668 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | job 6898271598 has completed (purged errors)
[2025-11-27 17:38:24] 2025-11-27 17:37:53,673 | INFO     | overall cleanup function is called
[2025-11-27 17:38:24] 2025-11-27 17:37:54,681 | INFO     | --- collectZombieJob: --- 10, [1589614]
[2025-11-27 17:38:24] 2025-11-27 17:37:54,681 | INFO     | zombie collector waiting for pid 1589614
[2025-11-27 17:38:24] 2025-11-27 17:37:54,681 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:38:24] 2025-11-27 17:37:54,681 | INFO     | collected zombie processes
[2025-11-27 17:38:24] 2025-11-27 17:37:54,681 | INFO     | will attempt to kill all subprocesses of pid=1589614
[2025-11-27 17:38:24] 2025-11-27 17:37:54,695 | INFO     | process IDs to be killed: [1589614] (in reverse order)
[2025-11-27 17:38:24] 2025-11-27 17:37:54,705 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:38:24] 2025-11-27 17:37:54,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:38:24] 2025-11-27 17:37:54,705 | INFO     | did not find any defunct processes belonging to 1589614
[2025-11-27 17:38:24] 2025-11-27 17:37:54,706 | INFO     | did not find any defunct processes belonging to 1589614
[2025-11-27 17:38:24] 2025-11-27 17:37:54,706 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:38:24] 2025-11-27 17:37:54,706 | INFO     | ready for new job
[2025-11-27 17:38:24] 2025-11-27 17:37:54,706 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:38:24] 2025-11-27 17:37:54,706 | INFO     | ***************************************
[2025-11-27 17:38:24] 2025-11-27 17:37:54,706 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:38:24] 2025-11-27 17:37:54,706 | INFO     | ***************************************
[2025-11-27 17:38:24] 2025-11-27 17:37:54,706 | INFO     | 
[2025-11-27 17:38:24] 2025-11-27 17:37:54,707 | INFO     | pilot is running in a VM
[2025-11-27 17:38:24] 2025-11-27 17:37:54,707 | INFO     | architecture information:
[2025-11-27 17:38:24] 2025-11-27 17:37:54,707 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:38:24] 2025-11-27 17:37:54,710 | INFO     | cat /etc/os-release:
[2025-11-27 17:38:24] NAME="CentOS Linux"
[2025-11-27 17:38:24] VERSION="7 (Core)"
[2025-11-27 17:38:24] ID="centos"
[2025-11-27 17:38:24] ID_LIKE="rhel fedora"
[2025-11-27 17:38:24] VERSION_ID="7"
[2025-11-27 17:38:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:38:24] ANSI_COLOR="0;31"
[2025-11-27 17:38:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:38:24] HOME_URL="https://www.centos.org/"
[2025-11-27 17:38:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:38:24] 
[2025-11-27 17:38:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:38:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:38:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:38:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:38:24] 
[2025-11-27 17:38:24] 2025-11-27 17:37:54,710 | INFO     | ***************************************
[2025-11-27 17:38:24] 2025-11-27 17:37:55,213 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-27 17:38:24] 2025-11-27 17:37:55,217 | INFO     | sufficient remaining disk space (72386347008 B)
[2025-11-27 17:38:24] 2025-11-27 17:37:55,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:38:24] 2025-11-27 17:37:55,217 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:38:24] 2025-11-27 17:37:55,217 | INFO     | update_server=False
[2025-11-27 17:38:24] 2025-11-27 17:37:55,217 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:38:24] 2025-11-27 17:37:55,217 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:38:24] 2025-11-27 17:37:55,217 | INFO     | aborting loop
[2025-11-27 17:38:24] 2025-11-27 17:37:55,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:38:24] 2025-11-27 17:37:55,218 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 17:38:24] 2025-11-27 17:37:55,218 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:38:24] 2025-11-27 17:37:55,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:38:24] 2025-11-27 17:37:55,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:38:24] 2025-11-27 17:37:55,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:38:24] 2025-11-27 17:37:55,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:38:24] 2025-11-27 17:37:55,541 | INFO     | all payload control threads have been joined
[2025-11-27 17:38:24] 2025-11-27 17:37:55,612 | INFO     | all job control threads have been joined
[2025-11-27 17:38:24] 2025-11-27 17:37:55,737 | INFO     | all data control threads have been joined
[2025-11-27 17:38:24] 2025-11-27 17:37:56,223 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:37:56,223 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:37:56,223 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:37:56,436 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:37:56,546 | INFO     | [payload] control thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:37:56,617 | INFO     | [job] control thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:37:56,742 | INFO     | [data] control thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:37:56,819 | INFO     | [job] validate thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:37:56,903 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:37:57,056 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:37:57,122 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:37:57,491 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:37:57,496 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:37:57,536 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:37:59,223 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:38:06,015 | INFO     | job.realtimelogging is not enabled
[2025-11-27 17:38:24] 2025-11-27 17:38:07,021 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:38:24] 2025-11-27 17:38:18,258 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:38:24] 2025-11-27 17:38:19,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129476975228736)>', '<ExcThread(monitor, started 129476193142528)>']
[2025-11-27 17:38:24] 2025-11-27 17:38:20,345 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:38:24] 2025-11-27 17:38:20,345 | INFO     | [monitor] control thread has ended
[2025-11-27 17:38:24] 2025-11-27 17:38:24,843 | INFO     | all workflow threads have been joined
[2025-11-27 17:38:24] 2025-11-27 17:38:24,843 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:38:24] 2025-11-27 17:38:24,843 | INFO     | traces error code: 0
[2025-11-27 17:38:24] 2025-11-27 17:38:24,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:38:24] 2025-11-27 17:38:24,884 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:38:24] 2025-11-27 17:38:24,886 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:38:24] 2025-11-27 17:38:24,887 [wrapper] pilotpid: 1582959
[2025-11-27 17:38:24] 2025-11-27 17:38:24,888 [wrapper] Pilot exit status: 0
[2025-11-27 17:38:24] 2025-11-27 17:38:24,891 [wrapper] pandaids: 6898271598
[2025-11-27 17:38:24] 2025-11-27 17:38:24,900 [wrapper] cleanup supervisor_pilot 1637302 1582960
[2025-11-27 17:38:24] 2025-11-27 17:38:24,901 [wrapper] Test setup, not cleaning
[2025-11-27 17:38:24] 2025-11-27 17:38:24,902 [wrapper] apfmon messages muted
[2025-11-27 17:38:24] 2025-11-27 17:38:24,903 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:38:24] 2025-11-27 17:38:24,903 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:38:24]  *** Error codes and diagnostics ***
[2025-11-27 17:38:24]     "exeErrorCode": 0,
[2025-11-27 17:38:24]     "exeErrorDiag": "",
[2025-11-27 17:38:24]     "pilotErrorCode": 0,
[2025-11-27 17:38:24]     "pilotErrorDiag": "",
[2025-11-27 17:38:24]  *** Listing of results directory ***
[2025-11-27 17:38:24] total 1330208
[2025-11-27 17:38:24] -rw-r--r-- 1 boinc boinc    576529 Nov 26 15:05 pilot3.tar.gz
[2025-11-27 17:38:24] -rwx------ 1 boinc boinc     36292 Nov 26 15:26 runpilot2-wrapper.sh
[2025-11-27 17:38:24] -rw-r--r-- 1 boinc boinc      5112 Nov 26 15:26 queuedata.json
[2025-11-27 17:38:24] -rw-r--r-- 1 boinc boinc       100 Nov 27 15:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:38:24] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 15:09 run_atlas
[2025-11-27 17:38:24] -rw-r--r-- 1 boinc boinc       105 Nov 27 15:09 job.xml
[2025-11-27 17:38:24] -rw-r--r-- 2 boinc boinc     15847 Nov 27 15:09 start_atlas.sh
[2025-11-27 17:38:24] drwxrwx--x 2 boinc boinc      4096 Nov 27 15:09 shared
[2025-11-27 17:38:24] -rw-r--r-- 2 boinc boinc    590102 Nov 27 15:09 input.tar.gz
[2025-11-27 17:38:24] -rw-r--r-- 1 boinc boinc      6943 Nov 27 15:09 init_data.xml
[2025-11-27 17:38:24] -rw-r--r-- 2 boinc boinc 413044292 Nov 27 15:09 EVNT.47483658._002542.pool.root.1
[2025-11-27 17:38:24] -rw-r--r-- 1 boinc boinc         0 Nov 27 15:09 boinc_lockfile
[2025-11-27 17:38:24] -rw-r--r-- 1 boinc boinc      2786 Nov 27 15:09 pandaJob.out
[2025-11-27 17:38:24] -rw------- 1 boinc boinc    991580 Nov 27 15:10 agis_schedconf.cvmfs.json
[2025-11-27 17:38:24] -rw------- 1 boinc boinc   1516240 Nov 27 15:10 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:38:24] drwx------ 5 boinc boinc      4096 Nov 27 15:10 pilot3
[2025-11-27 17:38:24] -rw-r--r-- 1 boinc boinc       530 Nov 27 17:32 boinc_task_state.xml
[2025-11-27 17:38:24] -rw------- 1 boinc boinc 938782040 Nov 27 17:37 HITS.47556161._005244.pool.root.1
[2025-11-27 17:38:24] -rw------- 1 boinc boinc        95 Nov 27 17:37 pilot_heartbeat.json
[2025-11-27 17:38:24] -rw------- 1 boinc boinc      1030 Nov 27 17:37 memory_monitor_summary.json
[2025-11-27 17:38:24] -rw------- 1 boinc boinc   1864716 Nov 27 17:37 log.47556161._005244.job.log.tgz.1
[2025-11-27 17:38:24] -rw------- 1 boinc boinc      8548 Nov 27 17:37 heartbeat.json
[2025-11-27 17:38:24] -rw-r--r-- 1 boinc boinc      8192 Nov 27 17:38 boinc_mmap_file
[2025-11-27 17:38:24] -rw-r--r-- 1 boinc boinc        27 Nov 27 17:38 wrapper_checkpoint.txt
[2025-11-27 17:38:24] -rw------- 1 boinc boinc      4693 Nov 27 17:38 pilotlog.txt
[2025-11-27 17:38:24] -rw------- 1 boinc boinc   1327847 Nov 27 17:38 log.47556161._005244.job.log.1
[2025-11-27 17:38:24] -rw------- 1 boinc boinc       353 Nov 27 17:38 output.list
[2025-11-27 17:38:24] -rw-r--r-- 1 boinc boinc       620 Nov 27 17:38 runtime_log
[2025-11-27 17:38:24] -rw------- 1 boinc boinc   3215360 Nov 27 17:38 result.tar.gz
[2025-11-27 17:38:24] -rw------- 1 boinc boinc       648 Nov 27 17:38 Y6mMDm9aWi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZ4MKDmAWoLYm.diag
[2025-11-27 17:38:24] -rw-r--r-- 1 boinc boinc      8890 Nov 27 17:38 runtime_log.err
[2025-11-27 17:38:24] -rw-r--r-- 1 boinc boinc     21102 Nov 27 17:38 stderr.txt
[2025-11-27 17:38:24] HITS file was successfully produced:
[2025-11-27 17:38:24] -rw------- 1 boinc boinc 938782040 Nov 27 17:37 shared/HITS.pool.root.1
[2025-11-27 17:38:24]  *** Contents of shared directory: ***
[2025-11-27 17:38:24] total 1323888
[2025-11-27 17:38:24] -rw-r--r-- 2 boinc boinc     15847 Nov 27 15:09 start_atlas.sh
[2025-11-27 17:38:24] -rw-r--r-- 2 boinc boinc    590102 Nov 27 15:09 input.tar.gz
[2025-11-27 17:38:24] -rw-r--r-- 2 boinc boinc 413044292 Nov 27 15:09 ATLAS.root_0
[2025-11-27 17:38:24] -rw------- 1 boinc boinc 938782040 Nov 27 17:37 HITS.pool.root.1
[2025-11-27 17:38:24] -rw------- 1 boinc boinc   3215360 Nov 27 17:38 result.tar.gz
17:38:26 (1579098): run_atlas exited; CPU time 95906.150300
17:38:26 (1579098): called boinc_finish(0)

</stderr_txt>
]]>

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