Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
19:39:15 (1698493): wrapper (7.7.26015): starting
19:39:15 (1698493): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 19:39:15] Arguments: --nthreads 12
[2025-11-27 19:39:15] Threads: 12
[2025-11-27 19:39:15] Checking for CVMFS
[2025-11-27 19:39:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 19:39:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 19:39:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 19:39:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 19:39:15] 2.13.2.0 2113 3078 47868 153383 2 81 3077711 4096001 94 130560 0 5931548 99.994 141470 737 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 19:39:15] CVMFS is ok
[2025-11-27 19:39:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 19:39:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 19:39:15] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 19:39:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 19:39:15] Further information can be found at the LHC@home message board.
[2025-11-27 19:39:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 19:39:15] Checking for apptainer binary...
[2025-11-27 19:39:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 19:39:15] Running /usr/bin/apptainer --version
[2025-11-27 19:39:15] apptainer version 1.4.3
[2025-11-27 19:39:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 19:39:15] test-run
[2025-11-27 19:39:15] apptainer works
[2025-11-27 19:39:15] Set ATHENA_PROC_NUMBER=12
[2025-11-27 19:39:15] Set ATHENA_CORE_NUMBER=12
[2025-11-27 19:39:15] Starting ATLAS job with PandaID=6898272036
[2025-11-27 19:39:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:38:34]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | fitting pss+swap vs Time
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | sum of square deviations: 483971865.0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | sum of deviations: 79072715891.0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | mean x: 1764275882.5
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | mean y: 3199809.896551724
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | intersect: -288249270424.6403
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | chi2: 7.957834600382449
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | sum of square deviations: 424045160.0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | sum of deviations: 106448947737.0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | mean x: 1764275730.0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | mean y: 3268302.5585585586
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | intersect: -442886576204.63385
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | chi2: 5.819892493227368
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | current chi2=5.819892493227368 (change=26.865877647825613 %)
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | sum of square deviations: 369281342.5
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | sum of deviations: 99479521538.5
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | mean x: 1764275577.5
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | mean y: 3248887.4245283017
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | intersect: -475269314637.1212
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | chi2: 5.805129709933751
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | current chi2=5.805129709933751 (change=0.2536607559468892 %)
[2025-11-27 21:38:34] 2025-11-27 21:37:33,539 | INFO     | right removable region: 105
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | sum of square deviations: 424045160.0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | sum of deviations: 34293691747.999992
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | mean x: 1764276035.0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | mean y: 3313535.027027027
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | intersect: -142678514274.71295
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | chi2: 4.5111308722423145
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | current chi2=4.5111308722423145 (change=43.312080499568154 %)
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | sum of square deviations: 369281342.5
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | sum of deviations: -3602210003.0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | mean x: 1764276187.5
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | mean y: 3419032.0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | intersect: 17213314575.71327
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | chi2: 2.2725214639488307
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | current chi2=2.2725214639488307 (change=49.624129108467976 %)
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | sum of square deviations: 319447850.0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | sum of deviations: -9463981029.999996
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | mean x: 1764276340.0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | mean y: 3436784.306930693
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | intersect: 52271992711.15954
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | chi2: 2.2278023456145917
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | current chi2=2.2278023456145917 (change=1.9678194042899455 %)
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | left removable region: 30
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | sum of square deviations: 130793150.0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | sum of deviations: 8210948554.0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | mean x: 1764276462.0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | mean y: 3552330.7733333334
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | intersect: -110754413698.14436
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | chi2: 0.002267344839671683
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | current memory leak: 62.78 B/s (using 75 data points, chi2=0.00)
[2025-11-27 21:38:34] 2025-11-27 21:37:33,540 | INFO     | could have reported an average CPU frequency of 4299 MHz (7 samples)
[2025-11-27 21:38:34] 2025-11-27 21:37:33,541 | INFO     | ..............................
[2025-11-27 21:38:34] 2025-11-27 21:37:33,541 | INFO     | . Timing measurements:
[2025-11-27 21:38:34] 2025-11-27 21:37:33,541 | INFO     | . get job = 0 s
[2025-11-27 21:38:34] 2025-11-27 21:37:33,541 | INFO     | . initial setup = 2 s
[2025-11-27 21:38:34] 2025-11-27 21:37:33,541 | INFO     | . payload setup = 1 s
[2025-11-27 21:38:34] 2025-11-27 21:37:33,541 | INFO     | . stage-in = 0 s
[2025-11-27 21:38:34] 2025-11-27 21:37:33,541 | INFO     | . payload execution = 7070 s
[2025-11-27 21:38:34] 2025-11-27 21:37:33,541 | INFO     | . stage-out = 0 s
[2025-11-27 21:38:34] 2025-11-27 21:37:33,541 | INFO     | . log creation = 0 s
[2025-11-27 21:38:34] 2025-11-27 21:37:33,541 | INFO     | ..............................
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | 
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | job summary report
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | --------------------------------------------------
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | PanDA job id: 6898272036
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | task id: 47556161
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | errors: (none)
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | pilot state: finished 
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | transexitcode: 0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | exeerrorcode: 0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | exeerrordiag: 
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | exitcode: 0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | exitmsg: OK
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | cpuconsumptiontime: 75159 s
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | nevents: 1000
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | neventsw: 0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | pid: 1715043
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | pgrp: 1715043
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | corecount: 12
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | event service: False
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | sizes: {0: 2284316, 1: 2284578, 11: 2284606, 7075: 2321898, 7078: 2321898, 7081: 2322144}
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | --------------------------------------------------
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | 
[2025-11-27 21:38:34] 2025-11-27 21:37:33,558 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-27 21:38:34] 2025-11-27 21:37:33,563 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,563 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,563 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,563 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | job 6898272036 has completed (purged errors)
[2025-11-27 21:38:34] 2025-11-27 21:37:33,564 | INFO     | overall cleanup function is called
[2025-11-27 21:38:34] 2025-11-27 21:37:34,572 | INFO     | --- collectZombieJob: --- 10, [1715043]
[2025-11-27 21:38:34] 2025-11-27 21:37:34,572 | INFO     | zombie collector waiting for pid 1715043
[2025-11-27 21:38:34] 2025-11-27 21:37:34,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 21:38:34] 2025-11-27 21:37:34,572 | INFO     | collected zombie processes
[2025-11-27 21:38:34] 2025-11-27 21:37:34,572 | INFO     | will attempt to kill all subprocesses of pid=1715043
[2025-11-27 21:38:34] 2025-11-27 21:37:34,586 | INFO     | process IDs to be killed: [1715043] (in reverse order)
[2025-11-27 21:38:34] 2025-11-27 21:37:34,597 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 21:38:34] 2025-11-27 21:37:34,597 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 21:38:34] 2025-11-27 21:37:34,598 | INFO     | did not find any defunct processes belonging to 1715043
[2025-11-27 21:38:34] 2025-11-27 21:37:34,598 | INFO     | did not find any defunct processes belonging to 1715043
[2025-11-27 21:38:34] 2025-11-27 21:37:34,599 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 21:38:34] 2025-11-27 21:37:34,599 | INFO     | ready for new job
[2025-11-27 21:38:34] 2025-11-27 21:37:34,599 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 21:38:34] 2025-11-27 21:37:34,599 | INFO     | ***************************************
[2025-11-27 21:38:34] 2025-11-27 21:37:34,599 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 21:38:34] 2025-11-27 21:37:34,599 | INFO     | ***************************************
[2025-11-27 21:38:34] 2025-11-27 21:37:34,599 | INFO     | 
[2025-11-27 21:38:34] 2025-11-27 21:37:34,599 | INFO     | pilot is running in a VM
[2025-11-27 21:38:34] 2025-11-27 21:37:34,599 | INFO     | architecture information:
[2025-11-27 21:38:34] 2025-11-27 21:37:34,599 | INFO     | executing command: cat /etc/os-release
[2025-11-27 21:38:34] 2025-11-27 21:37:34,603 | INFO     | cat /etc/os-release:
[2025-11-27 21:38:34] NAME="CentOS Linux"
[2025-11-27 21:38:34] VERSION="7 (Core)"
[2025-11-27 21:38:34] ID="centos"
[2025-11-27 21:38:34] ID_LIKE="rhel fedora"
[2025-11-27 21:38:34] VERSION_ID="7"
[2025-11-27 21:38:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 21:38:34] ANSI_COLOR="0;31"
[2025-11-27 21:38:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 21:38:34] HOME_URL="https://www.centos.org/"
[2025-11-27 21:38:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 21:38:34] 
[2025-11-27 21:38:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 21:38:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 21:38:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 21:38:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 21:38:34] 
[2025-11-27 21:38:34] 2025-11-27 21:37:34,603 | INFO     | ***************************************
[2025-11-27 21:38:34] 2025-11-27 21:37:35,106 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-27 21:38:34] 2025-11-27 21:37:35,110 | INFO     | sufficient remaining disk space (71138541568 B)
[2025-11-27 21:38:34] 2025-11-27 21:37:35,110 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 21:38:34] 2025-11-27 21:37:35,110 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 21:38:34] 2025-11-27 21:37:35,110 | INFO     | update_server=False
[2025-11-27 21:38:34] 2025-11-27 21:37:35,110 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 21:38:34] 2025-11-27 21:37:35,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:38:34] 2025-11-27 21:37:35,387 | INFO     | all data control threads have been joined
[2025-11-27 21:38:34] 2025-11-27 21:37:35,525 | INFO     | all payload control threads have been joined
[2025-11-27 21:38:34] 2025-11-27 21:37:35,714 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:38:34] 2025-11-27 21:37:35,714 | INFO     | aborting loop
[2025-11-27 21:38:34] 2025-11-27 21:37:35,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 21:38:34] 2025-11-27 21:37:36,012 | INFO     | all job control threads have been joined
[2025-11-27 21:38:34] 2025-11-27 21:37:36,115 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:36,115 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:36,385 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:36,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:38:34] 2025-11-27 21:37:36,392 | INFO     | [data] control thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:36,477 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:36,530 | INFO     | [payload] control thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:36,719 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:36,719 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:37,017 | INFO     | [job] control thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:37,065 | INFO     | [job] validate thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:37,073 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:37,199 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:37,466 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:37,995 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:40,397 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:37:46,015 | INFO     | job.realtimelogging is not enabled
[2025-11-27 21:38:34] 2025-11-27 21:37:47,020 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:38:34] 2025-11-27 21:38:05,226 | INFO     | PID=1702352 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 21:38:34] 2025-11-27 21:38:05,226 | INFO     | .. there are 2 such processes running
[2025-11-27 21:38:34] 2025-11-27 21:38:05,227 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:38:34] 2025-11-27 21:38:05,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:38:34] 2025-11-27 21:38:05,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:38:34] 2025-11-27 21:38:28,267 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:38:34] 2025-11-27 21:38:28,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974746748736)>', '<ExcThread(monitor, started 139974116632320)>']
[2025-11-27 21:38:34] 2025-11-27 21:38:29,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:38:34] 2025-11-27 21:38:29,349 | INFO     | [monitor] control thread has ended
[2025-11-27 21:38:34] 2025-11-27 21:38:34,006 | INFO     | all workflow threads have been joined
[2025-11-27 21:38:34] 2025-11-27 21:38:34,006 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:38:34] 2025-11-27 21:38:34,006 | INFO     | traces error code: 0
[2025-11-27 21:38:34] 2025-11-27 21:38:34,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:38:34] 2025-11-27 21:38:34,034 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:38:34] 2025-11-27 21:38:34,035 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:38:34] 2025-11-27 21:38:34,036 [wrapper] pilotpid: 1702352
[2025-11-27 21:38:34] 2025-11-27 21:38:34,037 [wrapper] Pilot exit status: 0
[2025-11-27 21:38:34] 2025-11-27 21:38:34,039 [wrapper] pandaids: 6898272036
[2025-11-27 21:38:34] 2025-11-27 21:38:34,046 [wrapper] cleanup supervisor_pilot 1749697 1702353
[2025-11-27 21:38:34] 2025-11-27 21:38:34,046 [wrapper] Test setup, not cleaning
[2025-11-27 21:38:34] 2025-11-27 21:38:34,047 [wrapper] apfmon messages muted
[2025-11-27 21:38:34] 2025-11-27 21:38:34,048 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:38:34] 2025-11-27 21:38:34,048 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:38:34]  *** Error codes and diagnostics ***
[2025-11-27 21:38:34]     "exeErrorCode": 0,
[2025-11-27 21:38:34]     "exeErrorDiag": "",
[2025-11-27 21:38:34]     "pilotErrorCode": 0,
[2025-11-27 21:38:34]     "pilotErrorDiag": "",
[2025-11-27 21:38:34]  *** Listing of results directory ***
[2025-11-27 21:38:34] total 1295832
[2025-11-27 21:38:34] -rw-r--r-- 1 boinc boinc    576529 Nov 26 15:05 pilot3.tar.gz
[2025-11-27 21:38:34] -rwx------ 1 boinc boinc     36292 Nov 26 15:41 runpilot2-wrapper.sh
[2025-11-27 21:38:34] -rw-r--r-- 1 boinc boinc      5112 Nov 26 15:41 queuedata.json
[2025-11-27 21:38:34] -rw-r--r-- 1 boinc boinc       100 Nov 27 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:38:34] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 19:39 run_atlas
[2025-11-27 21:38:34] -rw-r--r-- 1 boinc boinc       105 Nov 27 19:39 job.xml
[2025-11-27 21:38:34] -rw-r--r-- 2 boinc boinc     15847 Nov 27 19:39 start_atlas.sh
[2025-11-27 21:38:34] drwxrwx--x 2 boinc boinc      4096 Nov 27 19:39 shared
[2025-11-27 21:38:34] -rw-r--r-- 2 boinc boinc    590104 Nov 27 19:39 input.tar.gz
[2025-11-27 21:38:34] -rw-r--r-- 1 boinc boinc      6943 Nov 27 19:39 init_data.xml
[2025-11-27 21:38:34] -rw-r--r-- 2 boinc boinc 410940267 Nov 27 19:39 EVNT.47483658._002551.pool.root.1
[2025-11-27 21:38:34] -rw-r--r-- 1 boinc boinc         0 Nov 27 19:39 boinc_lockfile
[2025-11-27 21:38:34] -rw-r--r-- 1 boinc boinc      2783 Nov 27 19:39 pandaJob.out
[2025-11-27 21:38:34] -rw------- 1 boinc boinc    991191 Nov 27 19:39 agis_schedconf.cvmfs.json
[2025-11-27 21:38:34] -rw------- 1 boinc boinc   1516240 Nov 27 19:39 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:38:34] drwx------ 5 boinc boinc      4096 Nov 27 19:39 pilot3
[2025-11-27 21:38:34] -rw-r--r-- 1 boinc boinc       530 Nov 27 21:32 boinc_task_state.xml
[2025-11-27 21:38:34] -rw------- 1 boinc boinc 906277912 Nov 27 21:37 HITS.47556161._005331.pool.root.1
[2025-11-27 21:38:34] -rw------- 1 boinc boinc      1030 Nov 27 21:37 memory_monitor_summary.json
[2025-11-27 21:38:34] -rw------- 1 boinc boinc   1828403 Nov 27 21:37 log.47556161._005331.job.log.tgz.1
[2025-11-27 21:38:34] -rw------- 1 boinc boinc      8542 Nov 27 21:37 heartbeat.json
[2025-11-27 21:38:34] -rw------- 1 boinc boinc        95 Nov 27 21:38 pilot_heartbeat.json
[2025-11-27 21:38:34] -rw-r--r-- 1 boinc boinc        27 Nov 27 21:38 wrapper_checkpoint.txt
[2025-11-27 21:38:34] -rw-r--r-- 1 boinc boinc      8192 Nov 27 21:38 boinc_mmap_file
[2025-11-27 21:38:34] -rw------- 1 boinc boinc      4964 Nov 27 21:38 pilotlog.txt
[2025-11-27 21:38:34] -rw------- 1 boinc boinc   1068555 Nov 27 21:38 log.47556161._005331.job.log.1
[2025-11-27 21:38:34] -rw------- 1 boinc boinc       353 Nov 27 21:38 output.list
[2025-11-27 21:38:34] -rw-r--r-- 1 boinc boinc       620 Nov 27 21:38 runtime_log
[2025-11-27 21:38:34] -rw------- 1 boinc boinc   2918400 Nov 27 21:38 result.tar.gz
[2025-11-27 21:38:34] -rw------- 1 boinc boinc       647 Nov 27 21:38 xSiMDm4oWi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmo5MKDmwTjiGo.diag
[2025-11-27 21:38:34] -rw-r--r-- 1 boinc boinc      8890 Nov 27 21:38 runtime_log.err
[2025-11-27 21:38:34] -rw-r--r-- 1 boinc boinc     21143 Nov 27 21:38 stderr.txt
[2025-11-27 21:38:34] HITS file was successfully produced:
[2025-11-27 21:38:34] -rw------- 1 boinc boinc 906277912 Nov 27 21:37 shared/HITS.pool.root.1
[2025-11-27 21:38:34]  *** Contents of shared directory: ***
[2025-11-27 21:38:34] total 1289808
[2025-11-27 21:38:34] -rw-r--r-- 2 boinc boinc     15847 Nov 27 19:39 start_atlas.sh
[2025-11-27 21:38:34] -rw-r--r-- 2 boinc boinc    590104 Nov 27 19:39 input.tar.gz
[2025-11-27 21:38:34] -rw-r--r-- 2 boinc boinc 410940267 Nov 27 19:39 ATLAS.root_0
[2025-11-27 21:38:34] -rw------- 1 boinc boinc 906277912 Nov 27 21:37 HITS.pool.root.1
[2025-11-27 21:38:34] -rw------- 1 boinc boinc   2918400 Nov 27 21:38 result.tar.gz
21:38:35 (1698493): run_atlas exited; CPU time 75093.106082
21:38:35 (1698493): called boinc_finish(0)

</stderr_txt>
]]>

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