Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:14:34 (1318642): wrapper (7.7.26015): starting
07:14:34 (1318642): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 07:14:34] Arguments: --nthreads 8
[2025-11-27 07:14:34] Threads: 8
[2025-11-27 07:14:34] Checking for CVMFS
[2025-11-27 07:14:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 07:14:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 07:14:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 07:14:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 07:14:34] 2.10.1.0 4440 253297 174980 153364 1 49 11205184 18432001 3769 130560 2 282092215 99.988 10247226 6512 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-27 07:14:34] CVMFS is ok
[2025-11-27 07:14:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 07:14:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 07:14:34] Further information can be found at the LHC@home message board.
[2025-11-27 07:14:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 07:14:34] Checking for apptainer binary...
[2025-11-27 07:14:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 07:14:34] Running /usr/bin/apptainer --version
[2025-11-27 07:14:34] apptainer version 1.1.9-1.el8
[2025-11-27 07:14:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 07:14:35] c-16-31.aglt2.org
[2025-11-27 07:14:35] apptainer works
[2025-11-27 07:14:35] Set ATHENA_PROC_NUMBER=8
[2025-11-27 07:14:35] Set ATHENA_CORE_NUMBER=8
[2025-11-27 07:14:35] Starting ATLAS job with PandaID=6898271472
[2025-11-27 07:14:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 01:27:59]  *** The last 200 lines of the pilot log: ***
[2025-11-28 01:27:59] 2025-11-28 06:27:20,418 | INFO     | this job has now completed (state=finished)
[2025-11-28 01:27:59] 2025-11-28 06:27:20,418 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-28 01:27:59] 2025-11-28 06:27:20,418 | INFO     | log transfer has been attempted: DONE
[2025-11-28 01:27:59] 2025-11-28 06:27:20,418 | INFO     | job 6898271472 has finished - writing final server update
[2025-11-28 01:27:59] 2025-11-28 06:27:20,418 | INFO     | total number of processed events: 1000 (read)
[2025-11-28 01:27:59] 2025-11-28 06:27:20,420 | INFO     | executing command: lscpu
[2025-11-28 01:27:59] 2025-11-28 06:27:20,485 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-28 01:27:59] 2025-11-28 06:27:20,892 | INFO     | monitor loop #4655: job 0:6898271472 is in state 'finished'
[2025-11-28 01:27:59] 2025-11-28 06:27:20,892 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:27:59] 2025-11-28 06:27:21,557 | INFO     | time since job start (65554s) is within the limit (172800.0s)
[2025-11-28 01:27:59] 2025-11-28 06:27:23,395 | INFO     | monitor loop #4656: job 0:6898271472 is in state 'finished'
[2025-11-28 01:27:59] 2025-11-28 06:27:23,396 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:27:59] 2025-11-28 06:27:23,563 | INFO     | time since job start (65556s) is within the limit (172800.0s)
[2025-11-28 01:27:59] 2025-11-28 06:27:25,568 | INFO     | time since job start (65558s) is within the limit (172800.0s)
[2025-11-28 01:27:59] 2025-11-28 06:27:25,898 | INFO     | monitor loop #4657: job 0:6898271472 is in state 'finished'
[2025-11-28 01:27:59] 2025-11-28 06:27:25,898 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:27:59] 2025-11-28 06:27:26,040 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-28 01:27:59] 2025-11-28 06:27:26,050 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2969.86545
[2025-11-28 01:27:59] 2025-11-28 06:27:26,058 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6898271472/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 01:27:59] 2025-11-28 06:27:26,059 | INFO     | extracted standard info from prmon json
[2025-11-28 01:27:59] 2025-11-28 06:27:26,059 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 01:27:59] 2025-11-28 06:27:26,059 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 01:27:59] 2025-11-28 06:27:26,089 | INFO     | fitting pss+swap vs Time
[2025-11-28 01:27:59] 2025-11-28 06:27:26,090 | INFO     | sum of square deviations: 385210021949.62805
[2025-11-28 01:27:59] 2025-11-28 06:27:26,126 | INFO     | sum of deviations: 17433796437154.94
[2025-11-28 01:27:59] 2025-11-28 06:27:26,127 | INFO     | mean x: 1764278471.1813953
[2025-11-28 01:27:59] 2025-11-28 06:27:26,127 | INFO     | mean y: 3456929.066976744
[2025-11-28 01:27:59] 2025-11-28 06:27:26,127 | INFO     | intersect: -79844080706.00902
[2025-11-28 01:27:59] 2025-11-28 06:27:26,129 | INFO     | chi2: 68.58707475679856
[2025-11-28 01:27:59] 2025-11-28 06:27:26,130 | INFO     | sum of square deviations: 379859943901.9627
[2025-11-28 01:27:59] 2025-11-28 06:27:26,164 | INFO     | sum of deviations: 17891859985117.168
[2025-11-28 01:27:59] 2025-11-28 06:27:26,165 | INFO     | mean x: 1764278318.682243
[2025-11-28 01:27:59] 2025-11-28 06:27:26,165 | INFO     | mean y: 3469984.729906542
[2025-11-28 01:27:59] 2025-11-28 06:27:26,165 | INFO     | intersect: -83096159653.47034
[2025-11-28 01:27:59] 2025-11-28 06:27:26,166 | INFO     | chi2: 65.5491118978084
[2025-11-28 01:27:59] 2025-11-28 06:27:26,167 | INFO     | current chi2=65.5491118978084 (change=4.429351841819181 %)
[2025-11-28 01:27:59] 2025-11-28 06:27:26,167 | INFO     | right removable region: 1069
[2025-11-28 01:27:59] 2025-11-28 06:27:26,168 | INFO     | sum of square deviations: 379859824951.96265
[2025-11-28 01:27:59] 2025-11-28 06:27:26,203 | INFO     | sum of deviations: 17052381864885.68
[2025-11-28 01:27:59] 2025-11-28 06:27:26,203 | INFO     | mean x: 1764278623.682243
[2025-11-28 01:27:59] 2025-11-28 06:27:26,204 | INFO     | mean y: 3467791.619626168
[2025-11-28 01:27:59] 2025-11-28 06:27:26,204 | INFO     | intersect: -79197202642.24144
[2025-11-28 01:27:59] 2025-11-28 06:27:26,205 | INFO     | chi2: 66.34187880562534
[2025-11-28 01:27:59] 2025-11-28 06:27:26,206 | INFO     | current chi2=66.34187880562534 (change=3.2734971700344535 %)
[2025-11-28 01:27:59] 2025-11-28 06:27:26,206 | INFO     | left removable region: 10
[2025-11-28 01:27:59] 2025-11-28 06:27:26,207 | INFO     | sum of square deviations: 368264391529.09393
[2025-11-28 01:27:59] 2025-11-28 06:27:26,243 | INFO     | sum of deviations: 17390780134739.06
[2025-11-28 01:27:59] 2025-11-28 06:27:26,243 | INFO     | mean x: 1764278593.184136
[2025-11-28 01:27:59] 2025-11-28 06:27:26,244 | INFO     | mean y: 3486702.2304060436
[2025-11-28 01:27:59] 2025-11-28 06:27:26,244 | INFO     | intersect: -83312146892.1408
[2025-11-28 01:27:59] 2025-11-28 06:27:26,245 | INFO     | chi2: 63.09770733355903
[2025-11-28 01:27:59] 2025-11-28 06:27:26,245 | INFO     | current memory leak: 47.22 B/s (using 1059 data points, chi2=63.10)
[2025-11-28 01:27:59] 2025-11-28 06:27:26,247 | INFO     | could have reported an average CPU frequency of 2906 MHz (39 samples)
[2025-11-28 01:27:59] 2025-11-28 06:27:26,247 | INFO     | ..............................
[2025-11-28 01:27:59] 2025-11-28 06:27:26,247 | INFO     | . Timing measurements:
[2025-11-28 01:27:59] 2025-11-28 06:27:26,247 | INFO     | . get job = 0 s
[2025-11-28 01:27:59] 2025-11-28 06:27:26,247 | INFO     | . initial setup = 2 s
[2025-11-28 01:27:59] 2025-11-28 06:27:26,247 | INFO     | . payload setup = 6 s
[2025-11-28 01:27:59] 2025-11-28 06:27:26,248 | INFO     | . stage-in = 0 s
[2025-11-28 01:27:59] 2025-11-28 06:27:26,248 | INFO     | . payload execution = 65523 s
[2025-11-28 01:27:59] 2025-11-28 06:27:26,248 | INFO     | . stage-out = 3 s
[2025-11-28 01:27:59] 2025-11-28 06:27:26,248 | INFO     | . log creation = 0 s
[2025-11-28 01:27:59] 2025-11-28 06:27:26,248 | INFO     | ..............................
[2025-11-28 01:27:59] 2025-11-28 06:27:26,398 | INFO     | 
[2025-11-28 01:27:59] 2025-11-28 06:27:26,399 | INFO     | job summary report
[2025-11-28 01:27:59] 2025-11-28 06:27:26,399 | INFO     | --------------------------------------------------
[2025-11-28 01:27:59] 2025-11-28 06:27:26,399 | INFO     | PanDA job id: 6898271472
[2025-11-28 01:27:59] 2025-11-28 06:27:26,399 | INFO     | task id: 47556173
[2025-11-28 01:27:59] 2025-11-28 06:27:26,399 | INFO     | errors: (none)
[2025-11-28 01:27:59] 2025-11-28 06:27:26,399 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 01:27:59] 2025-11-28 06:27:26,400 | INFO     | pilot state: finished 
[2025-11-28 01:27:59] 2025-11-28 06:27:26,400 | INFO     | transexitcode: 0
[2025-11-28 01:27:59] 2025-11-28 06:27:26,400 | INFO     | exeerrorcode: 0
[2025-11-28 01:27:59] 2025-11-28 06:27:26,400 | INFO     | exeerrordiag: 
[2025-11-28 01:27:59] 2025-11-28 06:27:26,400 | INFO     | exitcode: 0
[2025-11-28 01:27:59] 2025-11-28 06:27:26,400 | INFO     | exitmsg: OK
[2025-11-28 01:27:59] 2025-11-28 06:27:26,400 | INFO     | cpuconsumptiontime: 485520 s
[2025-11-28 01:27:59] 2025-11-28 06:27:26,401 | INFO     | nevents: 1000
[2025-11-28 01:27:59] 2025-11-28 06:27:26,401 | INFO     | neventsw: 0
[2025-11-28 01:27:59] 2025-11-28 06:27:26,401 | INFO     | pid: 1341657
[2025-11-28 01:27:59] 2025-11-28 06:27:26,401 | INFO     | pgrp: 1341657
[2025-11-28 01:27:59] 2025-11-28 06:27:26,401 | INFO     | corecount: 8
[2025-11-28 01:27:59] 2025-11-28 06:27:26,401 | INFO     | event service: False
[2025-11-28 01:27:59] 2025-11-28 06:27:26,401 | INFO     | sizes: {0: 2284144, 1: 2284343, 5: 2284605, 12: 2284661, 65533: 2339515, 65537: 2348693, 65543: 2348883}
[2025-11-28 01:27:59] 2025-11-28 06:27:26,402 | INFO     | --------------------------------------------------
[2025-11-28 01:27:59] 2025-11-28 06:27:26,402 | INFO     | 
[2025-11-28 01:27:59] 2025-11-28 06:27:26,402 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-28 01:27:59] 2025-11-28 06:27:26,424 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,425 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,425 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,425 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,428 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 01:27:59] 2025-11-28 06:27:26,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,428 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 01:27:59] 2025-11-28 06:27:26,428 | INFO     | job 6898271472 has completed (purged errors)
[2025-11-28 01:27:59] 2025-11-28 06:27:26,428 | INFO     | overall cleanup function is called
[2025-11-28 01:27:59] 2025-11-28 06:27:27,446 | INFO     | --- collectZombieJob: --- 10, [1341657]
[2025-11-28 01:27:59] 2025-11-28 06:27:27,446 | INFO     | zombie collector waiting for pid 1341657
[2025-11-28 01:27:59] 2025-11-28 06:27:27,446 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 01:27:59] 2025-11-28 06:27:27,447 | INFO     | collected zombie processes
[2025-11-28 01:27:59] 2025-11-28 06:27:27,447 | INFO     | will attempt to kill all subprocesses of pid=1341657
[2025-11-28 01:27:59] 2025-11-28 06:27:27,767 | INFO     | process IDs to be killed: [1341657] (in reverse order)
[2025-11-28 01:27:59] 2025-11-28 06:27:27,863 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 01:27:59] 2025-11-28 06:27:27,864 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 01:27:59] 2025-11-28 06:27:27,880 | INFO     | did not find any defunct processes belonging to 1341657
[2025-11-28 01:27:59] 2025-11-28 06:27:27,893 | INFO     | did not find any defunct processes belonging to 1341657
[2025-11-28 01:27:59] 2025-11-28 06:27:27,895 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 01:27:59] 2025-11-28 06:27:27,895 | INFO     | ready for new job
[2025-11-28 01:27:59] 2025-11-28 06:27:27,895 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 01:27:59] 2025-11-28 06:27:27,902 | INFO     | ***************************************
[2025-11-28 01:27:59] 2025-11-28 06:27:27,902 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 01:27:59] 2025-11-28 06:27:27,903 | INFO     | ***************************************
[2025-11-28 01:27:59] 2025-11-28 06:27:27,903 | INFO     | 
[2025-11-28 01:27:59] 2025-11-28 06:27:27,917 | INFO     | architecture information:
[2025-11-28 01:27:59] 2025-11-28 06:27:27,917 | INFO     | executing command: cat /etc/os-release
[2025-11-28 01:27:59] 2025-11-28 06:27:27,931 | INFO     | cat /etc/os-release:
[2025-11-28 01:27:59] NAME="CentOS Linux"
[2025-11-28 01:27:59] VERSION="7 (Core)"
[2025-11-28 01:27:59] ID="centos"
[2025-11-28 01:27:59] ID_LIKE="rhel fedora"
[2025-11-28 01:27:59] VERSION_ID="7"
[2025-11-28 01:27:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 01:27:59] ANSI_COLOR="0;31"
[2025-11-28 01:27:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 01:27:59] HOME_URL="https://www.centos.org/"
[2025-11-28 01:27:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 01:27:59] 
[2025-11-28 01:27:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 01:27:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 01:27:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 01:27:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 01:27:59] 
[2025-11-28 01:27:59] 2025-11-28 06:27:27,931 | INFO     | ***************************************
[2025-11-28 01:27:59] 2025-11-28 06:27:28,434 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-28 01:27:59] 2025-11-28 06:27:28,450 | INFO     | sufficient remaining disk space (99646177280 B)
[2025-11-28 01:27:59] 2025-11-28 06:27:28,451 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 01:27:59] 2025-11-28 06:27:28,451 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 01:27:59] 2025-11-28 06:27:28,451 | INFO     | update_server=False
[2025-11-28 01:27:59] 2025-11-28 06:27:28,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 01:27:59] 2025-11-28 06:27:28,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 01:27:59] 2025-11-28 06:27:28,917 | INFO     | all payload control threads have been joined
[2025-11-28 01:27:59] 2025-11-28 06:27:29,081 | INFO     | all data control threads have been joined
[2025-11-28 01:27:59] 2025-11-28 06:27:29,260 | INFO     | all job control threads have been joined
[2025-11-28 01:27:59] 2025-11-28 06:27:29,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:27:59] 2025-11-28 06:27:29,407 | INFO     | aborting loop
[2025-11-28 01:27:59] 2025-11-28 06:27:29,457 | INFO     | [job] retrieve thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:29,621 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:29,834 | INFO     | [payload] failed_post thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:29,922 | INFO     | [payload] control thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:29,940 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:30,070 | INFO     | [job] validate thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:30,087 | INFO     | [data] control thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:30,174 | INFO     | [data] copytool_in thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:30,262 | INFO     | [job] control thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:30,412 | INFO     | [job] job monitor thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:30,431 | INFO     | [payload] validate_post thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:30,454 | INFO     | [data] copytool_out thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:30,560 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:30,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 01:27:59] 2025-11-28 06:27:31,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:27:59] 2025-11-28 06:27:32,412 | INFO     | [job] queue monitor thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:34,931 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:38,213 | INFO     | [monitor] cgroup control has ended
[2025-11-28 01:27:59] 2025-11-28 06:27:38,949 | INFO     | job.realtimelogging is not enabled
[2025-11-28 01:27:59] 2025-11-28 06:27:39,954 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 01:27:59] 2025-11-28 06:27:40,556 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139997413263168)>', '<ExcThread(monitor, started 139996539385600)>']
[2025-11-28 01:27:59] 2025-11-28 06:27:45,574 | INFO     | all workflow threads have been joined
[2025-11-28 01:27:59] 2025-11-28 06:27:45,575 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 01:27:59] 2025-11-28 06:27:45,575 | INFO     | traces error code: 0
[2025-11-28 01:27:59] 2025-11-28 06:27:45,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 01:27:59] 2025-11-28 06:27:59,021 | INFO     | PID=1325594 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 01:27:59] 2025-11-28 06:27:59,022 | INFO     | .. there are 5 such processes running
[2025-11-28 01:27:59] 2025-11-28 06:27:59,023 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 01:27:59] 2025-11-28 06:27:59,023 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 01:27:59] 2025-11-28 06:27:59,023 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 01:27:59] 2025-11-28 06:27:59,023 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 01:27:59] 2025-11-28 06:27:59,023 | INFO     | [monitor] control thread has ended
[2025-11-28 01:27:59] 2025-11-28 06:27:59,132 [wrapper] ==== pilot stdout END ====
[2025-11-28 01:27:59] 2025-11-28 06:27:59,134 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 01:27:59] 2025-11-28 06:27:59,135 [wrapper] pilotpid: 1325594
[2025-11-28 01:27:59] 2025-11-28 06:27:59,137 [wrapper] Pilot exit status: 0
[2025-11-28 01:27:59] 2025-11-28 06:27:59,145 [wrapper] pandaids: 6898271472
[2025-11-28 01:27:59] 2025-11-28 06:27:59,203 [wrapper] cleanup supervisor_pilot 3109259 1325595
[2025-11-28 01:27:59] 2025-11-28 06:27:59,205 [wrapper] Test setup, not cleaning
[2025-11-28 01:27:59] 2025-11-28 06:27:59,208 [wrapper] apfmon messages muted
[2025-11-28 01:27:59] 2025-11-28 06:27:59,210 [wrapper] ==== wrapper stdout END ====
[2025-11-28 01:27:59] 2025-11-28 06:27:59,212 [wrapper] ==== wrapper stderr END ====
[2025-11-28 01:27:59]  *** Error codes and diagnostics ***
[2025-11-28 01:27:59]     "exeErrorCode": 0,
[2025-11-28 01:27:59]     "exeErrorDiag": "",
[2025-11-28 01:27:59]     "pilotErrorCode": 0,
[2025-11-28 01:27:59]     "pilotErrorDiag": "",
[2025-11-28 01:27:59]  *** Listing of results directory ***
[2025-11-28 01:27:59] total 1326204
[2025-11-28 01:27:59] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 10:05 pilot3.tar.gz
[2025-11-28 01:27:59] -rwx------ 1 boincer umatlas     36292 Nov 26 10:14 runpilot2-wrapper.sh
[2025-11-28 01:27:59] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 10:14 queuedata.json
[2025-11-28 01:27:59] -rw-r--r-- 1 boincer umatlas       100 Nov 27 07:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 01:27:59] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 07:14 run_atlas
[2025-11-28 01:27:59] -rw-r--r-- 1 boincer umatlas       105 Nov 27 07:14 job.xml
[2025-11-28 01:27:59] -rw-r--r-- 2 boincer umatlas 407847544 Nov 27 07:14 EVNT.47483658._003190.pool.root.1
[2025-11-28 01:27:59] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 07:14 start_atlas.sh
[2025-11-28 01:27:59] drwxrwx--x 2 boincer umatlas      4096 Nov 27 07:14 shared
[2025-11-28 01:27:59] -rw-r--r-- 2 boincer umatlas    590100 Nov 27 07:14 input.tar.gz
[2025-11-28 01:27:59] -rw-r--r-- 1 boincer umatlas         0 Nov 27 07:14 boinc_lockfile
[2025-11-28 01:27:59] -rw-r--r-- 1 boincer umatlas      2786 Nov 27 07:14 pandaJob.out
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas        57 Nov 27 07:14 setup.sh.local
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas    991566 Nov 27 07:14 agis_schedconf.cvmfs.json
[2025-11-28 01:27:59] drwx------ 5 boincer umatlas      4096 Nov 27 07:14 pilot3
[2025-11-28 01:27:59] -rw-r--r-- 1 boincer umatlas       533 Nov 28 01:09 boinc_task_state.xml
[2025-11-28 01:27:59] -rw-r--r-- 1 boincer umatlas      6014 Nov 28 01:19 init_data.xml
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas 923628653 Nov 28 01:26 HITS.47556173._001463.pool.root.1
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas      1065 Nov 28 01:27 memory_monitor_summary.json
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas   1516240 Nov 28 01:27 agis_ddmendpoints.agis.ALL.json
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas   2263624 Nov 28 01:27 log.47556173._001463.job.log.tgz.1
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas      8645 Nov 28 01:27 heartbeat.json
[2025-11-28 01:27:59] -rw-r--r-- 1 boincer umatlas        29 Nov 28 01:27 wrapper_checkpoint.txt
[2025-11-28 01:27:59] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 01:27 boinc_mmap_file
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas        95 Nov 28 01:27 pilot_heartbeat.json
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas       822 Nov 28 01:27 pilotlog.txt
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas   9052301 Nov 28 01:27 log.47556173._001463.job.log.1
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas       353 Nov 28 01:27 output.list
[2025-11-28 01:27:59] -rw-r--r-- 1 boincer umatlas       620 Nov 28 01:27 runtime_log
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas  11335680 Nov 28 01:27 result.tar.gz
[2025-11-28 01:27:59] -rw-r--r-- 1 boincer umatlas      9338 Nov 28 01:27 runtime_log.err
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas       666 Nov 28 01:27 IJjNDmDPWi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm63MKDmKMihEm.diag
[2025-11-28 01:27:59] -rw-r--r-- 1 boincer umatlas     21694 Nov 28 01:27 stderr.txt
[2025-11-28 01:27:59] HITS file was successfully produced:
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas 923628653 Nov 28 01:26 shared/HITS.pool.root.1
[2025-11-28 01:27:59]  *** Contents of shared directory: ***
[2025-11-28 01:27:59] total 1311952
[2025-11-28 01:27:59] -rw-r--r-- 2 boincer umatlas 407847544 Nov 27 07:14 ATLAS.root_0
[2025-11-28 01:27:59] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 07:14 start_atlas.sh
[2025-11-28 01:27:59] -rw-r--r-- 2 boincer umatlas    590100 Nov 27 07:14 input.tar.gz
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas 923628653 Nov 28 01:26 HITS.pool.root.1
[2025-11-28 01:27:59] -rw------- 1 boincer umatlas  11335680 Nov 28 01:27 result.tar.gz
01:28:01 (1318642): run_atlas exited; CPU time 485495.705107
01:28:01 (1318642): called boinc_finish(0)

</stderr_txt>
]]>

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