Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:13:52 (2225253): wrapper (7.7.26015): starting
09:13:52 (2225253): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 09:13:52] Arguments: --nthreads 8
[2025-11-27 09:13:52] Threads: 8
[2025-11-27 09:13:52] Checking for CVMFS
[2025-11-27 09:13:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 09:13:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 09:13:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 09:13:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 09:13:55] 2.13.3.0 12500 31596 250780 153366 1 604 28528866 32503808 48697 16776704 0 215908339 99.533 249290957 37121 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 09:13:55] CVMFS is ok
[2025-11-27 09:13:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 09:13:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 09:13:55] Further information can be found at the LHC@home message board.
[2025-11-27 09:13:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 09:13:55] Checking for apptainer binary...
[2025-11-27 09:13:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 09:13:55] Running /usr/bin/apptainer --version
[2025-11-27 09:13:55] apptainer version 1.4.4-1.el9
[2025-11-27 09:13:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 09:13:55] c7-7-36.aglt2.org
[2025-11-27 09:13:55] apptainer works
[2025-11-27 09:13:55] Set ATHENA_PROC_NUMBER=8
[2025-11-27 09:13:55] Set ATHENA_CORE_NUMBER=8
[2025-11-27 09:13:55] Starting ATLAS job with PandaID=6897998608
[2025-11-27 09:13:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 01:04:14]  *** The last 200 lines of the pilot log: ***
[2025-11-28 01:04:14] 2025-11-28 06:03:09,906 | INFO     | monitor loop #3222: job 0:6897998608 is in state 'finished'
[2025-11-28 01:04:14] 2025-11-28 06:03:09,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:04:14] 2025-11-28 06:03:10,439 | INFO     | time since job start (56925s) is within the limit (172800.0s)
[2025-11-28 01:04:14] 2025-11-28 06:03:12,410 | INFO     | monitor loop #3223: job 0:6897998608 is in state 'finished'
[2025-11-28 01:04:14] 2025-11-28 06:03:12,410 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:04:14] 2025-11-28 06:03:12,448 | INFO     | time since job start (56927s) is within the limit (172800.0s)
[2025-11-28 01:04:14] 2025-11-28 06:03:14,454 | INFO     | time since job start (56929s) is within the limit (172800.0s)
[2025-11-28 01:04:14] 2025-11-28 06:03:14,917 | INFO     | monitor loop #3224: job 0:6897998608 is in state 'finished'
[2025-11-28 01:04:14] 2025-11-28 06:03:14,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:04:14] 2025-11-28 06:03:16,475 | INFO     | time since job start (56931s) is within the limit (172800.0s)
[2025-11-28 01:04:14] 2025-11-28 06:03:17,422 | INFO     | monitor loop #3225: job 0:6897998608 is in state 'finished'
[2025-11-28 01:04:14] 2025-11-28 06:03:17,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:04:14] 2025-11-28 06:03:18,493 | INFO     | time since job start (56933s) is within the limit (172800.0s)
[2025-11-28 01:04:14] 2025-11-28 06:03:19,933 | INFO     | monitor loop #3226: job 0:6897998608 is in state 'finished'
[2025-11-28 01:04:14] 2025-11-28 06:03:19,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:04:14] 2025-11-28 06:03:20,500 | INFO     | time since job start (56935s) is within the limit (172800.0s)
[2025-11-28 01:04:14] 2025-11-28 06:03:22,178 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 01:04:14] 2025-11-28 06:03:22,187 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3215.9346875000006
[2025-11-28 01:04:14] 2025-11-28 06:03:22,220 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6897998608/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 01:04:14] 2025-11-28 06:03:22,220 | INFO     | extracted standard info from prmon json
[2025-11-28 01:04:14] 2025-11-28 06:03:22,221 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 01:04:14] 2025-11-28 06:03:22,221 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 01:04:14] 2025-11-28 06:03:22,233 | INFO     | fitting pss+swap vs Time
[2025-11-28 01:04:14] 2025-11-28 06:03:22,235 | INFO     | sum of square deviations: 251026855055.15475
[2025-11-28 01:04:14] 2025-11-28 06:03:22,252 | INFO     | sum of deviations: 206436483989.80835
[2025-11-28 01:04:14] 2025-11-28 06:03:22,252 | INFO     | mean x: 1764281334.6459227
[2025-11-28 01:04:14] 2025-11-28 06:03:22,252 | INFO     | mean y: 2839162.0418454935
[2025-11-28 01:04:14] 2025-11-28 06:03:22,252 | INFO     | intersect: -1448049570.2140212
[2025-11-28 01:04:14] 2025-11-28 06:03:22,253 | INFO     | chi2: 20.687662280168407
[2025-11-28 01:04:14] 2025-11-28 06:03:22,254 | INFO     | sum of square deviations: 247008574416.85706
[2025-11-28 01:04:14] 2025-11-28 06:03:22,271 | INFO     | sum of deviations: 511646071784.34845
[2025-11-28 01:04:14] 2025-11-28 06:03:22,271 | INFO     | mean x: 1764281182.1510248
[2025-11-28 01:04:14] 2025-11-28 06:03:22,271 | INFO     | mean y: 2850741.6332254587
[2025-11-28 01:04:14] 2025-11-28 06:03:22,271 | INFO     | intersect: -3651627806.3350053
[2025-11-28 01:04:14] 2025-11-28 06:03:22,272 | INFO     | chi2: 17.36629958308895
[2025-11-28 01:04:14] 2025-11-28 06:03:22,272 | INFO     | current chi2=17.36629958308895 (change=16.054799484344738 %)
[2025-11-28 01:04:14] 2025-11-28 06:03:22,272 | INFO     | right removable region: 926
[2025-11-28 01:04:14] 2025-11-28 06:03:22,273 | INFO     | sum of square deviations: 247007979543.55334
[2025-11-28 01:04:14] 2025-11-28 06:03:22,289 | INFO     | sum of deviations: -136824667989.35596
[2025-11-28 01:04:14] 2025-11-28 06:03:22,289 | INFO     | mean x: 1764281487.1521037
[2025-11-28 01:04:14] 2025-11-28 06:03:22,289 | INFO     | mean y: 2852185.2081984896
[2025-11-28 01:04:14] 2025-11-28 06:03:22,289 | INFO     | intersect: 980137328.6494441
[2025-11-28 01:04:14] 2025-11-28 06:03:22,290 | INFO     | chi2: 17.177570974482045
[2025-11-28 01:04:14] 2025-11-28 06:03:22,290 | INFO     | current chi2=17.177570974482045 (change=16.967075632567745 %)
[2025-11-28 01:04:14] 2025-11-28 06:03:22,290 | INFO     | left removable region: 10
[2025-11-28 01:04:14] 2025-11-28 06:03:22,291 | INFO     | sum of square deviations: 238318959946.04678
[2025-11-28 01:04:14] 2025-11-28 06:03:22,306 | INFO     | sum of deviations: 85758878007.89246
[2025-11-28 01:04:14] 2025-11-28 06:03:22,307 | INFO     | mean x: 1764281456.658297
[2025-11-28 01:04:14] 2025-11-28 06:03:22,307 | INFO     | mean y: 2871533.290393013
[2025-11-28 01:04:14] 2025-11-28 06:03:22,307 | INFO     | intersect: -632003670.291392
[2025-11-28 01:04:14] 2025-11-28 06:03:22,308 | INFO     | chi2: 12.4077478818617
[2025-11-28 01:04:14] 2025-11-28 06:03:22,308 | INFO     | current memory leak: 0.36 B/s (using 916 data points, chi2=12.41)
[2025-11-28 01:04:14] 2025-11-28 06:03:22,309 | INFO     | could have reported an average CPU frequency of 3220 MHz (35 samples)
[2025-11-28 01:04:14] 2025-11-28 06:03:22,309 | INFO     | ..............................
[2025-11-28 01:04:14] 2025-11-28 06:03:22,309 | INFO     | . Timing measurements:
[2025-11-28 01:04:14] 2025-11-28 06:03:22,309 | INFO     | . get job = 0 s
[2025-11-28 01:04:14] 2025-11-28 06:03:22,309 | INFO     | . initial setup = 5 s
[2025-11-28 01:04:14] 2025-11-28 06:03:22,309 | INFO     | . payload setup = 18 s
[2025-11-28 01:04:14] 2025-11-28 06:03:22,309 | INFO     | . stage-in = 0 s
[2025-11-28 01:04:14] 2025-11-28 06:03:22,309 | INFO     | . payload execution = 56848 s
[2025-11-28 01:04:14] 2025-11-28 06:03:22,309 | INFO     | . stage-out = 4 s
[2025-11-28 01:04:14] 2025-11-28 06:03:22,309 | INFO     | . log creation = 1 s
[2025-11-28 01:04:14] 2025-11-28 06:03:22,309 | INFO     | ..............................
[2025-11-28 01:04:14] 2025-11-28 06:03:22,553 | INFO     | time since job start (56937s) is within the limit (172800.0s)
[2025-11-28 01:04:14] 2025-11-28 06:03:22,920 | INFO     | 
[2025-11-28 01:04:14] 2025-11-28 06:03:22,921 | INFO     | job summary report
[2025-11-28 01:04:14] 2025-11-28 06:03:22,921 | INFO     | --------------------------------------------------
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | PanDA job id: 6897998608
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | task id: 47556173
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | errors: (none)
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | pilot state: finished 
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | transexitcode: 0
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | exeerrorcode: 0
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | exeerrordiag: 
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | exitcode: 0
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | exitmsg: OK
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | cpuconsumptiontime: 190061 s
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | nevents: 1000
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | neventsw: 0
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | pid: 2253016
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | pgrp: 2253016
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | corecount: 8
[2025-11-28 01:04:14] 2025-11-28 06:03:22,922 | INFO     | event service: False
[2025-11-28 01:04:14] 2025-11-28 06:03:22,923 | INFO     | sizes: {0: 2283436, 1: 2284292, 12: 2284292, 17: 2284582, 23: 2284610, 56867: 2335482, 56868: 2335609, 56874: 2344687, 56877: 2344743, 56902: 2344989}
[2025-11-28 01:04:14] 2025-11-28 06:03:22,923 | INFO     | --------------------------------------------------
[2025-11-28 01:04:14] 2025-11-28 06:03:22,923 | INFO     | 
[2025-11-28 01:04:14] 2025-11-28 06:03:22,923 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-28 01:04:14] 2025-11-28 06:03:22,993 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,993 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,993 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,993 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,994 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,994 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,994 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,994 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,994 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,994 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,994 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,994 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,994 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,994 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,994 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,994 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,994 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,994 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 01:04:14] 2025-11-28 06:03:22,995 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,995 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 01:04:14] 2025-11-28 06:03:22,995 | INFO     | job 6897998608 has completed (purged errors)
[2025-11-28 01:04:14] 2025-11-28 06:03:22,995 | INFO     | overall cleanup function is called
[2025-11-28 01:04:14] 2025-11-28 06:03:24,023 | INFO     | --- collectZombieJob: --- 10, [2253016]
[2025-11-28 01:04:14] 2025-11-28 06:03:24,023 | INFO     | zombie collector waiting for pid 2253016
[2025-11-28 01:04:14] 2025-11-28 06:03:24,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 01:04:14] 2025-11-28 06:03:24,024 | INFO     | collected zombie processes
[2025-11-28 01:04:14] 2025-11-28 06:03:24,024 | INFO     | will attempt to kill all subprocesses of pid=2253016
[2025-11-28 01:04:14] 2025-11-28 06:03:26,797 | INFO     | process IDs to be killed: [2253016] (in reverse order)
[2025-11-28 01:04:14] 2025-11-28 06:03:27,345 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 01:04:14] 2025-11-28 06:03:27,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 01:04:14] 2025-11-28 06:03:27,460 | INFO     | did not find any defunct processes belonging to 2253016
[2025-11-28 01:04:14] 2025-11-28 06:03:27,527 | INFO     | did not find any defunct processes belonging to 2253016
[2025-11-28 01:04:14] 2025-11-28 06:03:27,529 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 01:04:14] 2025-11-28 06:03:27,529 | INFO     | ready for new job
[2025-11-28 01:04:14] 2025-11-28 06:03:27,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 01:04:14] 2025-11-28 06:03:27,543 | INFO     | ***************************************
[2025-11-28 01:04:14] 2025-11-28 06:03:27,575 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 01:04:14] 2025-11-28 06:03:27,576 | INFO     | ***************************************
[2025-11-28 01:04:14] 2025-11-28 06:03:27,576 | INFO     | 
[2025-11-28 01:04:14] 2025-11-28 06:03:27,586 | INFO     | architecture information:
[2025-11-28 01:04:14] 2025-11-28 06:03:27,590 | INFO     | executing command: cat /etc/os-release
[2025-11-28 01:04:14] 2025-11-28 06:03:27,641 | INFO     | cat /etc/os-release:
[2025-11-28 01:04:14] NAME="CentOS Linux"
[2025-11-28 01:04:14] VERSION="7 (Core)"
[2025-11-28 01:04:14] ID="centos"
[2025-11-28 01:04:14] ID_LIKE="rhel fedora"
[2025-11-28 01:04:14] VERSION_ID="7"
[2025-11-28 01:04:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 01:04:14] ANSI_COLOR="0;31"
[2025-11-28 01:04:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 01:04:14] HOME_URL="https://www.centos.org/"
[2025-11-28 01:04:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 01:04:14] 
[2025-11-28 01:04:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 01:04:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 01:04:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 01:04:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 01:04:14] 
[2025-11-28 01:04:14] 2025-11-28 06:03:27,641 | INFO     | ***************************************
[2025-11-28 01:04:14] 2025-11-28 06:03:28,146 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-28 01:04:14] 2025-11-28 06:03:28,358 | INFO     | sufficient remaining disk space (85852160000 B)
[2025-11-28 01:04:14] 2025-11-28 06:03:28,358 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 01:04:14] 2025-11-28 06:03:28,358 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 01:04:14] 2025-11-28 06:03:28,358 | INFO     | update_server=False
[2025-11-28 01:04:14] 2025-11-28 06:03:28,358 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 01:04:14] 2025-11-28 06:03:28,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:04:14] 2025-11-28 06:03:28,366 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 01:04:14] 2025-11-28 06:03:28,386 | INFO     | all data control threads have been joined
[2025-11-28 01:04:14] 2025-11-28 06:03:28,580 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:04:14] 2025-11-28 06:03:28,581 | INFO     | aborting loop
[2025-11-28 01:04:14] 2025-11-28 06:03:28,739 | INFO     | all job control threads have been joined
[2025-11-28 01:04:14] 2025-11-28 06:03:29,364 | INFO     | [job] retrieve thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:29,368 | INFO     | [job] queue monitor thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:29,413 | INFO     | [data] control thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:29,424 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:29,544 | INFO     | all payload control threads have been joined
[2025-11-28 01:04:14] 2025-11-28 06:03:29,586 | INFO     | [job] job monitor thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:29,626 | INFO     | [payload] failed_post thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:29,699 | INFO     | [data] copytool_in thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:29,745 | INFO     | [job] control thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:29,798 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:30,117 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:30,123 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:30,209 | INFO     | [payload] validate_post thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:30,391 | INFO     | [data] copytool_out thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:30,550 | INFO     | [job] validate thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:30,551 | INFO     | [payload] control thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:31,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 01:04:14] 2025-11-28 06:03:35,419 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 01:04:14] 2025-11-28 06:03:56,899 | INFO     | PID=2235945 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 01:04:14] 2025-11-28 06:03:56,900 | INFO     | .. there are 77 such processes running
[2025-11-28 01:04:14] 2025-11-28 06:03:56,900 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 01:04:14] 2025-11-28 06:03:56,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 01:04:14] 2025-11-28 06:03:56,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 01:04:14] 2025-11-28 06:04:06,575 | INFO     | [monitor] cgroup control has ended
[2025-11-28 01:04:14] 2025-11-28 06:04:07,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140080568342336)>', '<ExcThread(monitor, started 140079930525440)>']
[2025-11-28 01:04:14] 2025-11-28 06:04:08,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 01:04:14] 2025-11-28 06:04:08,018 | INFO     | [monitor] control thread has ended
[2025-11-28 01:04:14] 2025-11-28 06:04:12,632 | INFO     | all workflow threads have been joined
[2025-11-28 01:04:14] 2025-11-28 06:04:12,632 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 01:04:14] 2025-11-28 06:04:12,633 | INFO     | traces error code: 0
[2025-11-28 01:04:14] 2025-11-28 06:04:12,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 01:04:14] 2025-11-28 06:04:13,497 [wrapper] ==== pilot stdout END ====
[2025-11-28 01:04:14] 2025-11-28 06:04:13,558 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 01:04:14] 2025-11-28 06:04:13,584 [wrapper] pilotpid: 2235945
[2025-11-28 01:04:14] 2025-11-28 06:04:13,595 [wrapper] Pilot exit status: 0
[2025-11-28 01:04:14] 2025-11-28 06:04:13,729 [wrapper] pandaids: 6897998608
[2025-11-28 01:04:14] 2025-11-28 06:04:14,132 [wrapper] cleanup supervisor_pilot 3547043 2235947
[2025-11-28 01:04:14] 2025-11-28 06:04:14,138 [wrapper] Test setup, not cleaning
[2025-11-28 01:04:14] 2025-11-28 06:04:14,143 [wrapper] apfmon messages muted
[2025-11-28 01:04:14] 2025-11-28 06:04:14,150 [wrapper] ==== wrapper stdout END ====
[2025-11-28 01:04:14] 2025-11-28 06:04:14,154 [wrapper] ==== wrapper stderr END ====
[2025-11-28 01:04:14]  *** Error codes and diagnostics ***
[2025-11-28 01:04:14]     "exeErrorCode": 0,
[2025-11-28 01:04:14]     "exeErrorDiag": "",
[2025-11-28 01:04:14]     "pilotErrorCode": 0,
[2025-11-28 01:04:14]     "pilotErrorDiag": "",
[2025-11-28 01:04:14]  *** Listing of results directory ***
[2025-11-28 01:04:14] total 1306436
[2025-11-28 01:04:14] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-28 01:04:14] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:21 queuedata.json
[2025-11-28 01:04:14] -rwx------. 1 boincer umatlas     36292 Nov 25 21:23 runpilot2-wrapper.sh
[2025-11-28 01:04:14] -rw-r--r--. 1 boincer umatlas       100 Nov 27 09:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 01:04:14] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 09:13 run_atlas
[2025-11-28 01:04:14] -rw-r--r--. 1 boincer umatlas       105 Nov 27 09:13 job.xml
[2025-11-28 01:04:14] -rw-r--r--. 2 boincer umatlas 411192471 Nov 27 09:13 EVNT.47483658._003148.pool.root.1
[2025-11-28 01:04:14] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 09:13 start_atlas.sh
[2025-11-28 01:04:14] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 09:13 shared
[2025-11-28 01:04:14] -rw-r--r--. 2 boincer umatlas    590103 Nov 27 09:13 input.tar.gz
[2025-11-28 01:04:14] -rw-r--r--. 1 boincer umatlas         0 Nov 27 09:13 boinc_lockfile
[2025-11-28 01:04:14] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 09:13 pandaJob.out
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas        57 Nov 27 09:13 setup.sh.local
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas    991588 Nov 27 09:14 agis_schedconf.cvmfs.json
[2025-11-28 01:04:14] drwx------. 5 boincer umatlas      4096 Nov 27 09:14 pilot3
[2025-11-28 01:04:14] -rw-r--r--. 1 boincer umatlas       533 Nov 28 00:29 boinc_task_state.xml
[2025-11-28 01:04:14] -rw-r--r--. 1 boincer umatlas      6949 Nov 28 00:58 init_data.xml
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas 904695317 Nov 28 01:01 HITS.47556173._001048.pool.root.1
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas      1069 Nov 28 01:02 memory_monitor_summary.json
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas   1516240 Nov 28 01:02 agis_ddmendpoints.agis.ALL.json
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas   2062902 Nov 28 01:02 log.47556173._001048.job.log.tgz.1
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas      8633 Nov 28 01:03 heartbeat.json
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas        95 Nov 28 01:03 pilot_heartbeat.json
[2025-11-28 01:04:14] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 01:04 boinc_mmap_file
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas      4824 Nov 28 01:04 pilotlog.txt
[2025-11-28 01:04:14] -rw-r--r--. 1 boincer umatlas        29 Nov 28 01:04 wrapper_checkpoint.txt
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas   6930406 Nov 28 01:04 log.47556173._001048.job.log.1
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas       353 Nov 28 01:04 output.list
[2025-11-28 01:04:14] -rw-r--r--. 1 boincer umatlas       620 Nov 28 01:04 runtime_log
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas   9011200 Nov 28 01:04 result.tar.gz
[2025-11-28 01:04:14] -rw-r--r--. 1 boincer umatlas      9338 Nov 28 01:04 runtime_log.err
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas       663 Nov 28 01:04 jgVLDm1MKi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNjMKDm8Vfhwn.diag
[2025-11-28 01:04:14] -rw-r--r--. 1 boincer umatlas     21808 Nov 28 01:04 stderr.txt
[2025-11-28 01:04:14] HITS file was successfully produced:
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas 904695317 Nov 28 01:01 shared/HITS.pool.root.1
[2025-11-28 01:04:14]  *** Contents of shared directory: ***
[2025-11-28 01:04:14] total 1294452
[2025-11-28 01:04:14] -rw-r--r--. 2 boincer umatlas 411192471 Nov 27 09:13 ATLAS.root_0
[2025-11-28 01:04:14] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 09:13 start_atlas.sh
[2025-11-28 01:04:14] -rw-r--r--. 2 boincer umatlas    590103 Nov 27 09:13 input.tar.gz
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas 904695317 Nov 28 01:01 HITS.pool.root.1
[2025-11-28 01:04:14] -rw-------. 1 boincer umatlas   9011200 Nov 28 01:04 result.tar.gz
01:04:15 (2225253): run_atlas exited; CPU time 191613.604114
01:04:15 (2225253): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN