Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:14:03 (3864638): wrapper (7.7.26015): starting
08:14:03 (3864638): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 08:14:03] Arguments: --nthreads 8
[2025-11-27 08:14:03] Threads: 8
[2025-11-27 08:14:03] Checking for CVMFS
[2025-11-27 08:14:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 08:14:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 08:14:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 08:14:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 08:14:04] 2.13.3.0 11772 31490 371092 153364 0 922 21842010 32935937 49034 16776704 0 184994636 99.514 237300308 38765 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 08:14:04] CVMFS is ok
[2025-11-27 08:14:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 08:14:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 08:14:04] Further information can be found at the LHC@home message board.
[2025-11-27 08:14:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 08:14:04] Checking for apptainer binary...
[2025-11-27 08:14:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 08:14:04] Running /usr/bin/apptainer --version
[2025-11-27 08:14:04] apptainer version 1.4.4-1.el9
[2025-11-27 08:14:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 08:14:05] c7-3-28.aglt2.org
[2025-11-27 08:14:05] apptainer works
[2025-11-27 08:14:05] Set ATHENA_PROC_NUMBER=8
[2025-11-27 08:14:05] Set ATHENA_CORE_NUMBER=8
[2025-11-27 08:14:05] Starting ATLAS job with PandaID=6898271883
[2025-11-27 08:14:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:50:09]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:50:09] 2025-11-27 23:49:06,226 | INFO     | monitor loop #2313: job 0:6898271883 is in state 'finished'
[2025-11-27 18:50:09] 2025-11-27 23:49:06,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:50:09] 2025-11-27 23:49:06,806 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 18:50:09] 2025-11-27 23:49:06,812 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3235.995302083334
[2025-11-27 18:50:09] 2025-11-27 23:49:06,828 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6898271883/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 18:50:09] 2025-11-27 23:49:06,829 | INFO     | extracted standard info from prmon json
[2025-11-27 18:50:09] 2025-11-27 23:49:06,829 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 18:50:09] 2025-11-27 23:49:06,829 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 18:50:09] 2025-11-27 23:49:06,837 | INFO     | fitting pss+swap vs Time
[2025-11-27 18:50:09] 2025-11-27 23:49:06,838 | INFO     | sum of square deviations: 74973821901.49269
[2025-11-27 18:50:09] 2025-11-27 23:49:06,846 | INFO     | sum of deviations: 822260879330.237
[2025-11-27 18:50:09] 2025-11-27 23:49:06,847 | INFO     | mean x: 1764268361.5601926
[2025-11-27 18:50:09] 2025-11-27 23:49:06,847 | INFO     | mean y: 2836128.686998395
[2025-11-27 18:50:09] 2025-11-27 23:49:06,847 | INFO     | intersect: -19346435624.55302
[2025-11-27 18:50:09] 2025-11-27 23:49:06,847 | INFO     | chi2: 10.706936945000317
[2025-11-27 18:50:09] 2025-11-27 23:49:06,848 | INFO     | sum of square deviations: 73183284771.72322
[2025-11-27 18:50:09] 2025-11-27 23:49:06,853 | INFO     | sum of deviations: 1004861378187.9847
[2025-11-27 18:50:09] 2025-11-27 23:49:06,853 | INFO     | mean x: 1764268209.0728154
[2025-11-27 18:50:09] 2025-11-27 23:49:06,853 | INFO     | mean y: 2851664.2669902914
[2025-11-27 18:50:09] 2025-11-27 23:49:06,853 | INFO     | intersect: -24221873825.878735
[2025-11-27 18:50:09] 2025-11-27 23:49:06,853 | INFO     | chi2: 8.136667535763621
[2025-11-27 18:50:09] 2025-11-27 23:49:06,853 | INFO     | current chi2=8.136667535763621 (change=24.005646268766924 %)
[2025-11-27 18:50:09] 2025-11-27 23:49:06,853 | INFO     | right removable region: 617
[2025-11-27 18:50:09] 2025-11-27 23:49:06,854 | INFO     | sum of square deviations: 73182691851.72316
[2025-11-27 18:50:09] 2025-11-27 23:49:06,858 | INFO     | sum of deviations: 578959935782.3059
[2025-11-27 18:50:09] 2025-11-27 23:49:06,858 | INFO     | mean x: 1764268514.0728154
[2025-11-27 18:50:09] 2025-11-27 23:49:06,858 | INFO     | mean y: 2856837.726537217
[2025-11-27 18:50:09] 2025-11-27 23:49:06,858 | INFO     | intersect: -13954552486.323772
[2025-11-27 18:50:09] 2025-11-27 23:49:06,859 | INFO     | chi2: 6.501027782220195
[2025-11-27 18:50:09] 2025-11-27 23:49:06,859 | INFO     | current chi2=6.501027782220195 (change=39.28209519104436 %)
[2025-11-27 18:50:09] 2025-11-27 23:49:06,859 | INFO     | sum of square deviations: 71420306526.7538
[2025-11-27 18:50:09] 2025-11-27 23:49:06,866 | INFO     | sum of deviations: 378560749082.2071
[2025-11-27 18:50:09] 2025-11-27 23:49:06,866 | INFO     | mean x: 1764268666.5856445
[2025-11-27 18:50:09] 2025-11-27 23:49:06,866 | INFO     | mean y: 2874177.5008156607
[2025-11-27 18:50:09] 2025-11-27 23:49:06,866 | INFO     | intersect: -9348568017.090462
[2025-11-27 18:50:09] 2025-11-27 23:49:06,866 | INFO     | chi2: 3.7793027208802457
[2025-11-27 18:50:09] 2025-11-27 23:49:06,867 | INFO     | current chi2=3.7793027208802457 (change=41.86607337356188 %)
[2025-11-27 18:50:09] 2025-11-27 23:49:06,867 | INFO     | sum of square deviations: 69686620216.02477
[2025-11-27 18:50:09] 2025-11-27 23:49:06,874 | INFO     | sum of deviations: 322780646806.19025
[2025-11-27 18:50:09] 2025-11-27 23:49:06,874 | INFO     | mean x: 1764268819.0904605
[2025-11-27 18:50:09] 2025-11-27 23:49:06,874 | INFO     | mean y: 2879073.0328947366
[2025-11-27 18:50:09] 2025-11-27 23:49:06,875 | INFO     | intersect: -8169017179.083799
[2025-11-27 18:50:09] 2025-11-27 23:49:06,875 | INFO     | chi2: 3.5378973551610375
[2025-11-27 18:50:09] 2025-11-27 23:49:06,875 | INFO     | current chi2=3.5378973551610375 (change=6.387563620809446 %)
[2025-11-27 18:50:09] 2025-11-27 23:49:06,875 | INFO     | left removable region: 30
[2025-11-27 18:50:09] 2025-11-27 23:49:06,876 | INFO     | sum of square deviations: 62712563640.742645
[2025-11-27 18:50:09] 2025-11-27 23:49:06,882 | INFO     | sum of deviations: 452041137057.31256
[2025-11-27 18:50:09] 2025-11-27 23:49:06,882 | INFO     | mean x: 1764269093.5826235
[2025-11-27 18:50:09] 2025-11-27 23:49:06,882 | INFO     | mean y: 2904131.1482112436
[2025-11-27 18:50:09] 2025-11-27 23:49:06,883 | INFO     | intersect: -12714200079.530792
[2025-11-27 18:50:09] 2025-11-27 23:49:06,883 | INFO     | chi2: 0.6690620435805117
[2025-11-27 18:50:09] 2025-11-27 23:49:06,883 | INFO     | current memory leak: 7.21 B/s (using 587 data points, chi2=0.67)
[2025-11-27 18:50:09] 2025-11-27 23:49:06,884 | INFO     | could have reported an average CPU frequency of 3210 MHz (24 samples)
[2025-11-27 18:50:09] 2025-11-27 23:49:06,884 | INFO     | ..............................
[2025-11-27 18:50:09] 2025-11-27 23:49:06,884 | INFO     | . Timing measurements:
[2025-11-27 18:50:09] 2025-11-27 23:49:06,884 | INFO     | . get job = 0 s
[2025-11-27 18:50:09] 2025-11-27 23:49:06,884 | INFO     | . initial setup = 5 s
[2025-11-27 18:50:09] 2025-11-27 23:49:06,884 | INFO     | . payload setup = 33 s
[2025-11-27 18:50:09] 2025-11-27 23:49:06,884 | INFO     | . stage-in = 0 s
[2025-11-27 18:50:09] 2025-11-27 23:49:06,885 | INFO     | . payload execution = 37962 s
[2025-11-27 18:50:09] 2025-11-27 23:49:06,885 | INFO     | . stage-out = 3 s
[2025-11-27 18:50:09] 2025-11-27 23:49:06,885 | INFO     | . log creation = 0 s
[2025-11-27 18:50:09] 2025-11-27 23:49:06,885 | INFO     | ..............................
[2025-11-27 18:50:09] 2025-11-27 23:49:07,050 | INFO     | time since job start (38049s) is within the limit (172800.0s)
[2025-11-27 18:50:09] 2025-11-27 23:49:07,131 | INFO     | 
[2025-11-27 18:50:09] 2025-11-27 23:49:07,131 | INFO     | job summary report
[2025-11-27 18:50:09] 2025-11-27 23:49:07,131 | INFO     | --------------------------------------------------
[2025-11-27 18:50:09] 2025-11-27 23:49:07,131 | INFO     | PanDA job id: 6898271883
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | task id: 47556161
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | errors: (none)
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | pilot state: finished 
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | transexitcode: 0
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | exeerrorcode: 0
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | exeerrordiag: 
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | exitcode: 0
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | exitmsg: OK
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | cpuconsumptiontime: 198874 s
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | nevents: 1000
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | neventsw: 0
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | pid: 3883965
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | pgrp: 3883965
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | corecount: 8
[2025-11-27 18:50:09] 2025-11-27 23:49:07,132 | INFO     | event service: False
[2025-11-27 18:50:09] 2025-11-27 23:49:07,133 | INFO     | sizes: {0: 2283487, 1: 2284343, 2: 2284343, 12: 2284371, 18: 2284661, 23: 2284689, 37999: 2326376, 38003: 2335426, 38010: 2335616}
[2025-11-27 18:50:09] 2025-11-27 23:49:07,133 | INFO     | --------------------------------------------------
[2025-11-27 18:50:09] 2025-11-27 23:49:07,133 | INFO     | 
[2025-11-27 18:50:09] 2025-11-27 23:49:07,133 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 18:50:09] 2025-11-27 23:49:07,158 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,158 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,158 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,159 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 18:50:09] 2025-11-27 23:49:07,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,160 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 18:50:09] 2025-11-27 23:49:07,165 | INFO     | job 6898271883 has completed (purged errors)
[2025-11-27 18:50:09] 2025-11-27 23:49:07,165 | INFO     | overall cleanup function is called
[2025-11-27 18:50:09] 2025-11-27 23:49:08,185 | INFO     | --- collectZombieJob: --- 10, [3883965]
[2025-11-27 18:50:09] 2025-11-27 23:49:08,185 | INFO     | zombie collector waiting for pid 3883965
[2025-11-27 18:50:09] 2025-11-27 23:49:08,186 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 18:50:09] 2025-11-27 23:49:08,186 | INFO     | collected zombie processes
[2025-11-27 18:50:09] 2025-11-27 23:49:08,186 | INFO     | will attempt to kill all subprocesses of pid=3883965
[2025-11-27 18:50:09] 2025-11-27 23:49:08,834 | INFO     | process IDs to be killed: [3883965] (in reverse order)
[2025-11-27 18:50:09] 2025-11-27 23:49:09,066 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 18:50:09] 2025-11-27 23:49:09,066 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 18:50:09] 2025-11-27 23:49:09,149 | INFO     | did not find any defunct processes belonging to 3883965
[2025-11-27 18:50:09] 2025-11-27 23:49:09,175 | INFO     | did not find any defunct processes belonging to 3883965
[2025-11-27 18:50:09] 2025-11-27 23:49:09,176 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 18:50:09] 2025-11-27 23:49:09,176 | INFO     | ready for new job
[2025-11-27 18:50:09] 2025-11-27 23:49:09,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:50:09] 2025-11-27 23:49:09,180 | INFO     | ***************************************
[2025-11-27 18:50:09] 2025-11-27 23:49:09,180 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:50:09] 2025-11-27 23:49:09,180 | INFO     | ***************************************
[2025-11-27 18:50:09] 2025-11-27 23:49:09,180 | INFO     | 
[2025-11-27 18:50:09] 2025-11-27 23:49:09,185 | INFO     | architecture information:
[2025-11-27 18:50:09] 2025-11-27 23:49:09,186 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:50:09] 2025-11-27 23:49:09,205 | INFO     | cat /etc/os-release:
[2025-11-27 18:50:09] NAME="CentOS Linux"
[2025-11-27 18:50:09] VERSION="7 (Core)"
[2025-11-27 18:50:09] ID="centos"
[2025-11-27 18:50:09] ID_LIKE="rhel fedora"
[2025-11-27 18:50:09] VERSION_ID="7"
[2025-11-27 18:50:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:50:09] ANSI_COLOR="0;31"
[2025-11-27 18:50:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:50:09] HOME_URL="https://www.centos.org/"
[2025-11-27 18:50:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:50:09] 
[2025-11-27 18:50:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:50:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:50:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:50:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:50:09] 
[2025-11-27 18:50:09] 2025-11-27 23:49:09,205 | INFO     | ***************************************
[2025-11-27 18:50:09] 2025-11-27 23:49:09,712 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 18:50:09] 2025-11-27 23:49:09,744 | INFO     | sufficient remaining disk space (66189262848 B)
[2025-11-27 18:50:09] 2025-11-27 23:49:09,744 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:50:09] 2025-11-27 23:49:09,744 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:50:09] 2025-11-27 23:49:09,744 | INFO     | update_server=False
[2025-11-27 18:50:09] 2025-11-27 23:49:09,745 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:50:09] 2025-11-27 23:49:09,745 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:50:09] 2025-11-27 23:49:09,745 | INFO     | aborting loop
[2025-11-27 18:50:09] 2025-11-27 23:49:10,175 | INFO     | all data control threads have been joined
[2025-11-27 18:50:09] 2025-11-27 23:49:10,652 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:50:09] 2025-11-27 23:49:10,660 | INFO     | all payload control threads have been joined
[2025-11-27 18:50:09] 2025-11-27 23:49:10,749 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:50:09] 2025-11-27 23:49:10,750 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:10,750 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:10,898 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:10,957 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:11,097 | INFO     | all job control threads have been joined
[2025-11-27 18:50:09] 2025-11-27 23:49:11,184 | INFO     | [data] control thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:11,234 | INFO     | [job] validate thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:11,644 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:11,666 | INFO     | [payload] control thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:11,847 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:11,882 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:11,984 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:50:09] 2025-11-27 23:49:12,084 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:12,102 | INFO     | [job] control thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:12,104 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:12,659 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:12,989 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:14,780 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:50:09] 2025-11-27 23:49:40,916 | INFO     | PID=3870194 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 18:50:09] 2025-11-27 23:49:40,917 | INFO     | .. there are 69 such processes running
[2025-11-27 18:50:09] 2025-11-27 23:49:40,917 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:50:09] 2025-11-27 23:49:40,917 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:50:09] 2025-11-27 23:49:40,918 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:50:09] 2025-11-27 23:50:03,838 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:50:09] 2025-11-27 23:50:04,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139722595886912)>', '<ExcThread(monitor, started 139722215102208)>']
[2025-11-27 18:50:09] 2025-11-27 23:50:05,061 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:50:09] 2025-11-27 23:50:05,061 | INFO     | [monitor] control thread has ended
[2025-11-27 18:50:09] 2025-11-27 23:50:09,374 | INFO     | all workflow threads have been joined
[2025-11-27 18:50:09] 2025-11-27 23:50:09,375 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:50:09] 2025-11-27 23:50:09,375 | INFO     | traces error code: 0
[2025-11-27 18:50:09] 2025-11-27 23:50:09,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:50:09] 2025-11-27 23:50:09,516 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:50:09] 2025-11-27 23:50:09,518 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:50:09] 2025-11-27 23:50:09,521 [wrapper] pilotpid: 3870194
[2025-11-27 18:50:09] 2025-11-27 23:50:09,523 [wrapper] Pilot exit status: 0
[2025-11-27 18:50:09] 2025-11-27 23:50:09,531 [wrapper] pandaids: 6898271883
[2025-11-27 18:50:09] 2025-11-27 23:50:09,693 [wrapper] cleanup supervisor_pilot 2413366 3870196
[2025-11-27 18:50:09] 2025-11-27 23:50:09,698 [wrapper] Test setup, not cleaning
[2025-11-27 18:50:09] 2025-11-27 23:50:09,702 [wrapper] apfmon messages muted
[2025-11-27 18:50:09] 2025-11-27 23:50:09,705 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:50:09] 2025-11-27 23:50:09,711 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:50:09]  *** Error codes and diagnostics ***
[2025-11-27 18:50:09]     "exeErrorCode": 0,
[2025-11-27 18:50:09]     "exeErrorDiag": "",
[2025-11-27 18:50:09]     "pilotErrorCode": 0,
[2025-11-27 18:50:09]     "pilotErrorDiag": "",
[2025-11-27 18:50:09]  *** Listing of results directory ***
[2025-11-27 18:50:09] total 1310376
[2025-11-27 18:50:09] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 10:05 pilot3.tar.gz
[2025-11-27 18:50:09] -rwx------. 1 boincer umatlas     36292 Nov 26 10:29 runpilot2-wrapper.sh
[2025-11-27 18:50:09] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 10:29 queuedata.json
[2025-11-27 18:50:09] -rw-r--r--. 1 boincer umatlas       100 Nov 27 08:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:50:09] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 08:14 run_atlas
[2025-11-27 18:50:09] -rw-r--r--. 1 boincer umatlas       105 Nov 27 08:14 job.xml
[2025-11-27 18:50:09] -rw-r--r--. 2 boincer umatlas 412034798 Nov 27 08:14 EVNT.47483658._002543.pool.root.1
[2025-11-27 18:50:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 08:14 start_atlas.sh
[2025-11-27 18:50:09] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 08:14 shared
[2025-11-27 18:50:09] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 08:14 input.tar.gz
[2025-11-27 18:50:09] -rw-r--r--. 1 boincer umatlas         0 Nov 27 08:14 boinc_lockfile
[2025-11-27 18:50:09] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 08:14 pandaJob.out
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas        57 Nov 27 08:14 setup.sh.local
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas    991566 Nov 27 08:14 agis_schedconf.cvmfs.json
[2025-11-27 18:50:09] drwx------. 5 boincer umatlas      4096 Nov 27 08:14 pilot3
[2025-11-27 18:50:09] -rw-r--r--. 1 boincer umatlas       533 Nov 27 18:36 boinc_task_state.xml
[2025-11-27 18:50:09] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 18:45 init_data.xml
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas 912414210 Nov 27 18:48 HITS.47556161._005257.pool.root.1
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas      1067 Nov 27 18:48 memory_monitor_summary.json
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas   1516240 Nov 27 18:48 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas   1860853 Nov 27 18:48 log.47556161._005257.job.log.tgz.1
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas      7931 Nov 27 18:49 heartbeat.json
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas        95 Nov 27 18:49 pilot_heartbeat.json
[2025-11-27 18:50:09] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 18:50 boinc_mmap_file
[2025-11-27 18:50:09] -rw-r--r--. 1 boincer umatlas        29 Nov 27 18:50 wrapper_checkpoint.txt
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas      4824 Nov 27 18:50 pilotlog.txt
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas   4864452 Nov 27 18:50 log.47556161._005257.job.log.1
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas       353 Nov 27 18:50 output.list
[2025-11-27 18:50:09] -rw-r--r--. 1 boincer umatlas       620 Nov 27 18:50 runtime_log
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas   6748160 Nov 27 18:50 result.tar.gz
[2025-11-27 18:50:09] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 18:50 runtime_log.err
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas       665 Nov 27 18:50 aUeNDm5dWi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQzJKDmd6npvn.diag
[2025-11-27 18:50:09] -rw-r--r--. 1 boincer umatlas     21352 Nov 27 18:50 stderr.txt
[2025-11-27 18:50:09] HITS file was successfully produced:
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas 912414210 Nov 27 18:48 shared/HITS.pool.root.1
[2025-11-27 18:50:09]  *** Contents of shared directory: ***
[2025-11-27 18:50:09] total 1300608
[2025-11-27 18:50:09] -rw-r--r--. 2 boincer umatlas 412034798 Nov 27 08:14 ATLAS.root_0
[2025-11-27 18:50:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 08:14 start_atlas.sh
[2025-11-27 18:50:09] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 08:14 input.tar.gz
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas 912414210 Nov 27 18:48 HITS.pool.root.1
[2025-11-27 18:50:09] -rw-------. 1 boincer umatlas   6748160 Nov 27 18:50 result.tar.gz
18:50:31 (3864638): run_atlas exited; CPU time 199479.946834
18:50:31 (3864638): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN