Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:27:28 (4555): wrapper (7.7.26015): starting
08:27:28 (4555): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 08:27:28] Arguments: --nthreads 12
[2025-11-27 08:27:28] Threads: 12
[2025-11-27 08:27:28] Checking for CVMFS
[2025-11-27 08:27:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 08:27:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 08:27:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 08:27:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 08:27:28] 2.11.2.0 2979 289195 94224 153364 2 82 18997031 20275201 1 130560 1 129380206 99.975 16102731 13923 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 08:27:28] CVMFS is ok
[2025-11-27 08:27:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 08:27:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 08:27:28] Further information can be found at the LHC@home message board.
[2025-11-27 08:27:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 08:27:28] Checking for apptainer binary...
[2025-11-27 08:27:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 08:27:28] Running /usr/bin/apptainer --version
[2025-11-27 08:27:28] apptainer version 1.3.2-1.el7
[2025-11-27 08:27:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 08:27:29] c-205-21.aglt2.org
[2025-11-27 08:27:29] apptainer works
[2025-11-27 08:27:29] Set ATHENA_PROC_NUMBER=12
[2025-11-27 08:27:29] Set ATHENA_CORE_NUMBER=12
[2025-11-27 08:27:29] Starting ATLAS job with PandaID=6898271270
[2025-11-27 08:27:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:31:31]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:31:31] 2025-11-27 20:30:30,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:31:31] 2025-11-27 20:30:30,762 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 15:31:31] 2025-11-27 20:30:30,766 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-27 15:31:31] 2025-11-27 20:30:30,768 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898271270/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:31:31] 2025-11-27 20:30:30,769 | INFO     | extracted standard info from prmon json
[2025-11-27 15:31:31] 2025-11-27 20:30:30,769 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:31:31] 2025-11-27 20:30:30,770 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:31:31] 2025-11-27 20:30:30,776 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:31:31] 2025-11-27 20:30:30,777 | INFO     | sum of square deviations: 22323335726.528873
[2025-11-27 15:31:31] 2025-11-27 20:30:30,780 | INFO     | sum of deviations: 359360554660.3264
[2025-11-27 15:31:31] 2025-11-27 20:30:30,780 | INFO     | mean x: 1764262750.7836537
[2025-11-27 15:31:31] 2025-11-27 20:30:30,781 | INFO     | mean y: 3396384.548076923
[2025-11-27 15:31:31] 2025-11-27 20:30:30,781 | INFO     | intersect: -28397665555.971813
[2025-11-27 15:31:31] 2025-11-27 20:30:30,782 | INFO     | chi2: 6.684042997494188
[2025-11-27 15:31:31] 2025-11-27 20:30:30,782 | INFO     | sum of square deviations: 21528082386.121887
[2025-11-27 15:31:31] 2025-11-27 20:30:30,786 | INFO     | sum of deviations: 522934186840.9523
[2025-11-27 15:31:31] 2025-11-27 20:30:30,786 | INFO     | mean x: 1764262598.2871046
[2025-11-27 15:31:31] 2025-11-27 20:30:30,786 | INFO     | mean y: 3427721.0851581506
[2025-11-27 15:31:31] 2025-11-27 20:30:30,786 | INFO     | intersect: -42851909352.686165
[2025-11-27 15:31:31] 2025-11-27 20:30:30,787 | INFO     | chi2: 3.449475597761289
[2025-11-27 15:31:31] 2025-11-27 20:30:30,787 | INFO     | current chi2=3.449475597761289 (change=48.39237869872353 %)
[2025-11-27 15:31:31] 2025-11-27 20:30:30,787 | INFO     | sum of square deviations: 20751945683.204403
[2025-11-27 15:31:31] 2025-11-27 20:30:30,791 | INFO     | sum of deviations: 593095338424.1527
[2025-11-27 15:31:31] 2025-11-27 20:30:30,791 | INFO     | mean x: 1764262445.7906404
[2025-11-27 15:31:31] 2025-11-27 20:30:30,791 | INFO     | mean y: 3441473.566502463
[2025-11-27 15:31:31] 2025-11-27 20:30:30,791 | INFO     | intersect: -50419581424.094025
[2025-11-27 15:31:31] 2025-11-27 20:30:30,792 | INFO     | chi2: 2.659399400080302
[2025-11-27 15:31:31] 2025-11-27 20:30:30,792 | INFO     | current chi2=2.659399400080302 (change=22.904240812538198 %)
[2025-11-27 15:31:31] 2025-11-27 20:30:30,792 | INFO     | right removable region: 405
[2025-11-27 15:31:31] 2025-11-27 20:30:30,792 | INFO     | sum of square deviations: 21528010406.12188
[2025-11-27 15:31:31] 2025-11-27 20:30:30,796 | INFO     | sum of deviations: 218135440477.9851
[2025-11-27 15:31:31] 2025-11-27 20:30:30,796 | INFO     | mean x: 1764262903.2871046
[2025-11-27 15:31:31] 2025-11-27 20:30:30,796 | INFO     | mean y: 3423387.5255474453
[2025-11-27 15:31:31] 2025-11-27 20:30:30,796 | INFO     | intersect: -17873206095.060677
[2025-11-27 15:31:31] 2025-11-27 20:30:30,797 | INFO     | chi2: 4.255890340332091
[2025-11-27 15:31:31] 2025-11-27 20:30:30,797 | INFO     | current chi2=4.255890340332091 (change=36.32760378819224 %)
[2025-11-27 15:31:31] 2025-11-27 20:30:30,797 | INFO     | sum of square deviations: 20751801723.2044
[2025-11-27 15:31:31] 2025-11-27 20:30:30,801 | INFO     | sum of deviations: 180870132398.43823
[2025-11-27 15:31:31] 2025-11-27 20:30:30,801 | INFO     | mean x: 1764263055.7906404
[2025-11-27 15:31:31] 2025-11-27 20:30:30,801 | INFO     | mean y: 3430704.852216749
[2025-11-27 15:31:31] 2025-11-27 20:30:30,801 | INFO     | intersect: -15373667474.035547
[2025-11-27 15:31:31] 2025-11-27 20:30:30,802 | INFO     | chi2: 4.174224717514439
[2025-11-27 15:31:31] 2025-11-27 20:30:30,802 | INFO     | current chi2=4.174224717514439 (change=1.9188845643818964 %)
[2025-11-27 15:31:31] 2025-11-27 20:30:30,802 | INFO     | left removable region: 20
[2025-11-27 15:31:31] 2025-11-27 20:30:30,803 | INFO     | sum of square deviations: 17695460312.64927
[2025-11-27 15:31:31] 2025-11-27 20:30:30,806 | INFO     | sum of deviations: 362543165779.0647
[2025-11-27 15:31:31] 2025-11-27 20:30:30,806 | INFO     | mean x: 1764263025.2987013
[2025-11-27 15:31:31] 2025-11-27 20:30:30,806 | INFO     | mean y: 3489511.5298701297
[2025-11-27 15:31:31] 2025-11-27 20:30:30,806 | INFO     | intersect: -36142589265.60823
[2025-11-27 15:31:31] 2025-11-27 20:30:30,807 | INFO     | chi2: 0.05681119792313149
[2025-11-27 15:31:31] 2025-11-27 20:30:30,807 | INFO     | current memory leak: 20.49 B/s (using 385 data points, chi2=0.06)
[2025-11-27 15:31:31] 2025-11-27 20:30:30,807 | INFO     | could have reported an average CPU frequency of 2352 MHz (18 samples)
[2025-11-27 15:31:31] 2025-11-27 20:30:30,807 | INFO     | ..............................
[2025-11-27 15:31:31] 2025-11-27 20:30:30,807 | INFO     | . Timing measurements:
[2025-11-27 15:31:31] 2025-11-27 20:30:30,808 | INFO     | . get job = 0 s
[2025-11-27 15:31:31] 2025-11-27 20:30:30,808 | INFO     | . initial setup = 2 s
[2025-11-27 15:31:31] 2025-11-27 20:30:30,808 | INFO     | . payload setup = 7 s
[2025-11-27 15:31:31] 2025-11-27 20:30:30,808 | INFO     | . stage-in = 0 s
[2025-11-27 15:31:31] 2025-11-27 20:30:30,808 | INFO     | . payload execution = 25327 s
[2025-11-27 15:31:31] 2025-11-27 20:30:30,808 | INFO     | . stage-out = 3 s
[2025-11-27 15:31:31] 2025-11-27 20:30:30,808 | INFO     | . log creation = 0 s
[2025-11-27 15:31:31] 2025-11-27 20:30:30,808 | INFO     | ..............................
[2025-11-27 15:31:31] 2025-11-27 20:30:30,890 | INFO     | 
[2025-11-27 15:31:31] 2025-11-27 20:30:30,890 | INFO     | job summary report
[2025-11-27 15:31:31] 2025-11-27 20:30:30,890 | INFO     | --------------------------------------------------
[2025-11-27 15:31:31] 2025-11-27 20:30:30,890 | INFO     | PanDA job id: 6898271270
[2025-11-27 15:31:31] 2025-11-27 20:30:30,890 | INFO     | task id: 47556173
[2025-11-27 15:31:31] 2025-11-27 20:30:30,891 | INFO     | errors: (none)
[2025-11-27 15:31:31] 2025-11-27 20:30:30,891 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:31:31] 2025-11-27 20:30:30,891 | INFO     | pilot state: finished 
[2025-11-27 15:31:31] 2025-11-27 20:30:30,891 | INFO     | transexitcode: 0
[2025-11-27 15:31:31] 2025-11-27 20:30:30,891 | INFO     | exeerrorcode: 0
[2025-11-27 15:31:31] 2025-11-27 20:30:30,891 | INFO     | exeerrordiag: 
[2025-11-27 15:31:31] 2025-11-27 20:30:30,892 | INFO     | exitcode: 0
[2025-11-27 15:31:31] 2025-11-27 20:30:30,892 | INFO     | exitmsg: OK
[2025-11-27 15:31:31] 2025-11-27 20:30:30,892 | INFO     | cpuconsumptiontime: 290346 s
[2025-11-27 15:31:31] 2025-11-27 20:30:30,892 | INFO     | nevents: 1000
[2025-11-27 15:31:31] 2025-11-27 20:30:30,892 | INFO     | neventsw: 0
[2025-11-27 15:31:31] 2025-11-27 20:30:30,892 | INFO     | pid: 15542
[2025-11-27 15:31:31] 2025-11-27 20:30:30,893 | INFO     | pgrp: 15542
[2025-11-27 15:31:31] 2025-11-27 20:30:30,893 | INFO     | corecount: 12
[2025-11-27 15:31:31] 2025-11-27 20:30:30,893 | INFO     | event service: False
[2025-11-27 15:31:31] 2025-11-27 20:30:30,893 | INFO     | sizes: {0: 2284315, 5: 2284577, 11: 2284633, 25338: 2321730, 25342: 2330724, 25344: 2330780, 25350: 2331154}
[2025-11-27 15:31:31] 2025-11-27 20:30:30,893 | INFO     | --------------------------------------------------
[2025-11-27 15:31:31] 2025-11-27 20:30:30,894 | INFO     | 
[2025-11-27 15:31:31] 2025-11-27 20:30:30,894 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 15:31:31] 2025-11-27 20:30:30,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,920 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,920 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,920 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,921 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,922 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:31:31] 2025-11-27 20:30:30,922 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:31:31] 2025-11-27 20:30:30,923 | INFO     | job 6898271270 has completed (purged errors)
[2025-11-27 15:31:31] 2025-11-27 20:30:30,923 | INFO     | overall cleanup function is called
[2025-11-27 15:31:31] 2025-11-27 20:30:31,940 | INFO     | --- collectZombieJob: --- 10, [15542]
[2025-11-27 15:31:31] 2025-11-27 20:30:31,940 | INFO     | zombie collector waiting for pid 15542
[2025-11-27 15:31:31] 2025-11-27 20:30:31,947 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:31:31] 2025-11-27 20:30:31,947 | INFO     | collected zombie processes
[2025-11-27 15:31:31] 2025-11-27 20:30:31,948 | INFO     | will attempt to kill all subprocesses of pid=15542
[2025-11-27 15:31:31] 2025-11-27 20:30:32,041 | INFO     | process IDs to be killed: [15542] (in reverse order)
[2025-11-27 15:31:31] 2025-11-27 20:30:32,093 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:31:31] 2025-11-27 20:30:32,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:31:31] 2025-11-27 20:30:32,096 | INFO     | did not find any defunct processes belonging to 15542
[2025-11-27 15:31:31] 2025-11-27 20:30:32,099 | INFO     | did not find any defunct processes belonging to 15542
[2025-11-27 15:31:31] 2025-11-27 20:30:32,102 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:31:31] 2025-11-27 20:30:32,102 | INFO     | ready for new job
[2025-11-27 15:31:31] 2025-11-27 20:30:32,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:31:31] 2025-11-27 20:30:32,104 | INFO     | ***************************************
[2025-11-27 15:31:31] 2025-11-27 20:30:32,104 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:31:31] 2025-11-27 20:30:32,104 | INFO     | ***************************************
[2025-11-27 15:31:31] 2025-11-27 20:30:32,105 | INFO     | 
[2025-11-27 15:31:31] 2025-11-27 20:30:32,105 | INFO     | architecture information:
[2025-11-27 15:31:31] 2025-11-27 20:30:32,106 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:31:31] 2025-11-27 20:30:32,122 | INFO     | cat /etc/os-release:
[2025-11-27 15:31:31] NAME="CentOS Linux"
[2025-11-27 15:31:31] VERSION="7 (Core)"
[2025-11-27 15:31:31] ID="centos"
[2025-11-27 15:31:31] ID_LIKE="rhel fedora"
[2025-11-27 15:31:31] VERSION_ID="7"
[2025-11-27 15:31:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:31:31] ANSI_COLOR="0;31"
[2025-11-27 15:31:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:31:31] HOME_URL="https://www.centos.org/"
[2025-11-27 15:31:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:31:31] 
[2025-11-27 15:31:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:31:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:31:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:31:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:31:31] 
[2025-11-27 15:31:31] 2025-11-27 20:30:32,123 | INFO     | ***************************************
[2025-11-27 15:31:31] 2025-11-27 20:30:32,626 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 15:31:31] 2025-11-27 20:30:32,641 | INFO     | sufficient remaining disk space (28246540288 B)
[2025-11-27 15:31:31] 2025-11-27 20:30:32,641 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:31:31] 2025-11-27 20:30:32,642 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:31:31] 2025-11-27 20:30:32,642 | INFO     | update_server=False
[2025-11-27 15:31:31] 2025-11-27 20:30:32,642 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:31:31] 2025-11-27 20:30:32,642 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:31:31] 2025-11-27 20:30:32,692 | INFO     | all job control threads have been joined
[2025-11-27 15:31:31] 2025-11-27 20:30:32,696 | INFO     | all data control threads have been joined
[2025-11-27 15:31:31] 2025-11-27 20:30:33,024 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 15:31:31] 2025-11-27 20:30:33,025 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 15:31:31] 2025-11-27 20:30:33,025 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:31:31] 2025-11-27 20:30:33,025 | INFO     | will abort loop
[2025-11-27 15:31:31] 2025-11-27 20:30:33,137 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:31:31] 2025-11-27 20:30:33,304 | INFO     | all payload control threads have been joined
[2025-11-27 15:31:31] 2025-11-27 20:30:33,648 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:33,648 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:33,697 | INFO     | [job] control thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:33,704 | INFO     | [data] control thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:33,964 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:34,031 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:34,078 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:34,205 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:34,309 | INFO     | [payload] control thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:34,583 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:34,697 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:34,716 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:34,923 | INFO     | [job] validate thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:35,143 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:35,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:31:31] 2025-11-27 20:30:39,525 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:30:42,853 | INFO     | job.realtimelogging is not enabled
[2025-11-27 15:31:31] 2025-11-27 20:30:43,858 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:31:31] 2025-11-27 20:31:02,968 | INFO     | PID=8248 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 15:31:31] 2025-11-27 20:31:02,969 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:31:31] 2025-11-27 20:31:02,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:31:31] 2025-11-27 20:31:02,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:31:31] 2025-11-27 20:31:25,610 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:31:31] 2025-11-27 20:31:26,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140363801024320)>', '<ExcThread(monitor, started 140363046037248)>']
[2025-11-27 15:31:31] 2025-11-27 20:31:27,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:31:31] 2025-11-27 20:31:27,072 | INFO     | [monitor] control thread has ended
[2025-11-27 15:31:31] 2025-11-27 20:31:31,361 | INFO     | all workflow threads have been joined
[2025-11-27 15:31:31] 2025-11-27 20:31:31,361 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:31:31] 2025-11-27 20:31:31,362 | INFO     | traces error code: 0
[2025-11-27 15:31:31] 2025-11-27 20:31:31,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:31:31] 2025-11-27 20:31:31,468 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:31:31] 2025-11-27 20:31:31,473 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:31:31] 2025-11-27 20:31:31,476 [wrapper] pilotpid: 8248
[2025-11-27 15:31:31] 2025-11-27 20:31:31,480 [wrapper] Pilot exit status: 0
[2025-11-27 15:31:31] 2025-11-27 20:31:31,494 [wrapper] pandaids: 6898271270
[2025-11-27 15:31:31] 2025-11-27 20:31:31,541 [wrapper] cleanup supervisor_pilot 27617 8249
[2025-11-27 15:31:31] 2025-11-27 20:31:31,545 [wrapper] Test setup, not cleaning
[2025-11-27 15:31:31] 2025-11-27 20:31:31,549 [wrapper] apfmon messages muted
[2025-11-27 15:31:31] 2025-11-27 20:31:31,553 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:31:31] 2025-11-27 20:31:31,557 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:31:31]  *** Error codes and diagnostics ***
[2025-11-27 15:31:31]     "exeErrorCode": 0,
[2025-11-27 15:31:31]     "exeErrorDiag": "",
[2025-11-27 15:31:31]     "pilotErrorCode": 0,
[2025-11-27 15:31:31]     "pilotErrorDiag": "",
[2025-11-27 15:31:31]  *** Listing of results directory ***
[2025-11-27 15:31:31] total 1309324
[2025-11-27 15:31:31] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 09:19 pilot3.tar.gz
[2025-11-27 15:31:31] -rwx------ 1 boincer umatlas     36292 Nov 26 09:52 runpilot2-wrapper.sh
[2025-11-27 15:31:31] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 09:52 queuedata.json
[2025-11-27 15:31:31] -rw-r--r-- 1 boincer umatlas       100 Nov 27 08:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:31:31] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 08:27 run_atlas
[2025-11-27 15:31:31] -rw-r--r-- 1 boincer umatlas       105 Nov 27 08:27 job.xml
[2025-11-27 15:31:31] -rw-r--r-- 2 boincer umatlas 408618982 Nov 27 08:27 EVNT.47483658._003187.pool.root.1
[2025-11-27 15:31:31] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 08:27 start_atlas.sh
[2025-11-27 15:31:31] drwxrwx--x 2 boincer umatlas      4096 Nov 27 08:27 shared
[2025-11-27 15:31:31] -rw-r--r-- 2 boincer umatlas    590104 Nov 27 08:27 input.tar.gz
[2025-11-27 15:31:31] -rw-r--r-- 1 boincer umatlas         0 Nov 27 08:27 boinc_lockfile
[2025-11-27 15:31:31] -rw-r--r-- 1 boincer umatlas      2786 Nov 27 08:27 pandaJob.out
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas        57 Nov 27 08:27 setup.sh.local
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas    991566 Nov 27 08:27 agis_schedconf.cvmfs.json
[2025-11-27 15:31:31] drwx------ 5 boincer umatlas      4096 Nov 27 08:27 pilot3
[2025-11-27 15:31:31] -rw-r--r-- 1 boincer umatlas      5956 Nov 27 15:18 init_data.xml
[2025-11-27 15:31:31] -rw-r--r-- 1 boincer umatlas       532 Nov 27 15:18 boinc_task_state.xml
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas 916717168 Nov 27 15:29 HITS.47556173._001437.pool.root.1
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas      1061 Nov 27 15:30 memory_monitor_summary.json
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas   1516240 Nov 27 15:30 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas   2185932 Nov 27 15:30 log.47556173._001437.job.log.tgz.1
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas      8676 Nov 27 15:30 heartbeat.json
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas        95 Nov 27 15:31 pilot_heartbeat.json
[2025-11-27 15:31:31] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 15:31 boinc_mmap_file
[2025-11-27 15:31:31] -rw-r--r-- 1 boincer umatlas        29 Nov 27 15:31 wrapper_checkpoint.txt
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas      5003 Nov 27 15:31 pilotlog.txt
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas   3562253 Nov 27 15:31 log.47556173._001437.job.log.1
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas       353 Nov 27 15:31 output.list
[2025-11-27 15:31:31] -rw-r--r-- 1 boincer umatlas       620 Nov 27 15:31 runtime_log
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas   5765120 Nov 27 15:31 result.tar.gz
[2025-11-27 15:31:31] -rw-r--r-- 1 boincer umatlas      9345 Nov 27 15:31 runtime_log.err
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas       670 Nov 27 15:31 5INNDm93Vi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDml2MKDmoVcQGm.diag
[2025-11-27 15:31:31] -rw-r--r-- 1 boincer umatlas     21270 Nov 27 15:31 stderr.txt
[2025-11-27 15:31:31] HITS file was successfully produced:
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas 916717168 Nov 27 15:29 shared/HITS.pool.root.1
[2025-11-27 15:31:31]  *** Contents of shared directory: ***
[2025-11-27 15:31:31] total 1300508
[2025-11-27 15:31:31] -rw-r--r-- 2 boincer umatlas 408618982 Nov 27 08:27 ATLAS.root_0
[2025-11-27 15:31:31] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 08:27 start_atlas.sh
[2025-11-27 15:31:31] -rw-r--r-- 2 boincer umatlas    590104 Nov 27 08:27 input.tar.gz
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas 916717168 Nov 27 15:29 HITS.pool.root.1
[2025-11-27 15:31:31] -rw------- 1 boincer umatlas   5765120 Nov 27 15:31 result.tar.gz
15:31:33 (4555): run_atlas exited; CPU time 284012.407842
15:31:33 (4555): called boinc_finish(0)

</stderr_txt>
]]>

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