Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:29:47 (2131688): wrapper (7.7.26015): starting
08:29:47 (2131688): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 08:29:47] Arguments: --nthreads 8
[2025-11-27 08:29:47] Threads: 8
[2025-11-27 08:29:47] Checking for CVMFS
[2025-11-27 08:29:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 08:29:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 08:29:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 08:29:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 08:29:48] 2.13.3.0 11285 31506 341980 153364 3 636 18233372 32935936 49624 16776704 0 232417569 99.612 243180294 37790 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 08:29:48] CVMFS is ok
[2025-11-27 08:29:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 08:29:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 08:29:48] Further information can be found at the LHC@home message board.
[2025-11-27 08:29:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 08:29:48] Checking for apptainer binary...
[2025-11-27 08:29:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 08:29:48] Running /usr/bin/apptainer --version
[2025-11-27 08:29:48] apptainer version 1.4.4-1.el9
[2025-11-27 08:29:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 08:29:48] c7-3-29.aglt2.org
[2025-11-27 08:29:48] apptainer works
[2025-11-27 08:29:48] Set ATHENA_PROC_NUMBER=8
[2025-11-27 08:29:48] Set ATHENA_CORE_NUMBER=8
[2025-11-27 08:29:48] Starting ATLAS job with PandaID=6898271600
[2025-11-27 08:29:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 23:52:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 23:52:04] 2025-11-28 04:51:29,714 | INFO     | monitor loop #3079: job 0:6898271600 is in state 'finished'
[2025-11-27 23:52:04] 2025-11-28 04:51:29,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:52:04] 2025-11-28 04:51:29,893 | INFO     | time since job start (55270s) is within the limit (172800.0s)
[2025-11-27 23:52:04] 2025-11-28 04:51:31,010 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 23:52:04] 2025-11-28 04:51:31,015 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3217.60934375
[2025-11-27 23:52:04] 2025-11-28 04:51:31,028 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6898271600/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 23:52:04] 2025-11-28 04:51:31,029 | INFO     | extracted standard info from prmon json
[2025-11-27 23:52:04] 2025-11-28 04:51:31,030 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 23:52:04] 2025-11-28 04:51:31,030 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 23:52:04] 2025-11-28 04:51:31,048 | INFO     | fitting pss+swap vs Time
[2025-11-27 23:52:04] 2025-11-28 04:51:31,049 | INFO     | sum of square deviations: 229835977248.99463
[2025-11-27 23:52:04] 2025-11-28 04:51:31,064 | INFO     | sum of deviations: 3072508850688.365
[2025-11-27 23:52:04] 2025-11-28 04:51:31,065 | INFO     | mean x: 1764277845.6298342
[2025-11-27 23:52:04] 2025-11-28 04:51:31,065 | INFO     | mean y: 3101235.6309392266
[2025-11-27 23:52:04] 2025-11-28 04:51:31,065 | INFO     | intersect: -23582237146.351112
[2025-11-27 23:52:04] 2025-11-28 04:51:31,066 | INFO     | chi2: 8.691856602883753
[2025-11-27 23:52:04] 2025-11-28 04:51:31,066 | INFO     | sum of square deviations: 226047670761.9998
[2025-11-27 23:52:04] 2025-11-28 04:51:31,082 | INFO     | sum of deviations: 3371829540848.8037
[2025-11-27 23:52:04] 2025-11-28 04:51:31,082 | INFO     | mean x: 1764277693.1333334
[2025-11-27 23:52:04] 2025-11-28 04:51:31,083 | INFO     | mean y: 3113281.0433333335
[2025-11-27 23:52:04] 2025-11-28 04:51:31,083 | INFO     | intersect: -26313652664.450306
[2025-11-27 23:52:04] 2025-11-28 04:51:31,083 | INFO     | chi2: 5.854038946593678
[2025-11-27 23:52:04] 2025-11-28 04:51:31,084 | INFO     | current chi2=5.854038946593678 (change=32.64915409842995 %)
[2025-11-27 23:52:04] 2025-11-28 04:51:31,084 | INFO     | sum of square deviations: 222301225524.9834
[2025-11-27 23:52:04] 2025-11-28 04:51:31,098 | INFO     | sum of deviations: 3404968181206.588
[2025-11-27 23:52:04] 2025-11-28 04:51:31,099 | INFO     | mean x: 1764277540.6368716
[2025-11-27 23:52:04] 2025-11-28 04:51:31,099 | INFO     | mean y: 3114620.709497207
[2025-11-27 23:52:04] 2025-11-28 04:51:31,099 | INFO     | intersect: -27020168199.703148
[2025-11-27 23:52:04] 2025-11-28 04:51:31,099 | INFO     | chi2: 5.533456768977808
[2025-11-27 23:52:04] 2025-11-28 04:51:31,099 | INFO     | current chi2=5.533456768977808 (change=5.476256317057974 %)
[2025-11-27 23:52:04] 2025-11-28 04:51:31,100 | INFO     | right removable region: 894
[2025-11-27 23:52:04] 2025-11-28 04:51:31,100 | INFO     | sum of square deviations: 226047323062.0001
[2025-11-27 23:52:04] 2025-11-28 04:51:31,114 | INFO     | sum of deviations: 2690742348253.865
[2025-11-27 23:52:04] 2025-11-28 04:51:31,114 | INFO     | mean x: 1764277998.1333334
[2025-11-27 23:52:04] 2025-11-28 04:51:31,114 | INFO     | mean y: 3116599.7677777777
[2025-11-27 23:52:04] 2025-11-28 04:51:31,114 | INFO     | intersect: -20997873190.17922
[2025-11-27 23:52:04] 2025-11-28 04:51:31,115 | INFO     | chi2: 4.8204692327373415
[2025-11-27 23:52:04] 2025-11-28 04:51:31,115 | INFO     | current chi2=4.8204692327373415 (change=44.540396224000936 %)
[2025-11-27 23:52:04] 2025-11-28 04:51:31,116 | INFO     | sum of square deviations: 222300640047.5267
[2025-11-27 23:52:04] 2025-11-28 04:51:31,129 | INFO     | sum of deviations: 2548579536874.6494
[2025-11-27 23:52:04] 2025-11-28 04:51:31,130 | INFO     | mean x: 1764278150.6346369
[2025-11-27 23:52:04] 2025-11-28 04:51:31,130 | INFO     | mean y: 3122380.3597765365
[2025-11-27 23:52:04] 2025-11-28 04:51:31,130 | INFO     | intersect: -20223554389.89684
[2025-11-27 23:52:04] 2025-11-28 04:51:31,130 | INFO     | chi2: 4.396913166463534
[2025-11-27 23:52:04] 2025-11-28 04:51:31,130 | INFO     | current chi2=4.396913166463534 (change=8.786614867227101 %)
[2025-11-27 23:52:04] 2025-11-28 04:51:31,131 | INFO     | left removable region: 20
[2025-11-27 23:52:04] 2025-11-28 04:51:31,131 | INFO     | sum of square deviations: 207016751885.95975
[2025-11-27 23:52:04] 2025-11-28 04:51:31,145 | INFO     | sum of deviations: 2716311673556.7773
[2025-11-27 23:52:04] 2025-11-28 04:51:31,145 | INFO     | mean x: 1764278120.1475973
[2025-11-27 23:52:04] 2025-11-28 04:51:31,145 | INFO     | mean y: 3142769.846681922
[2025-11-27 23:52:04] 2025-11-28 04:51:31,145 | INFO     | intersect: -23146332861.949997
[2025-11-27 23:52:04] 2025-11-28 04:51:31,146 | INFO     | chi2: 1.129027236400483
[2025-11-27 23:52:04] 2025-11-28 04:51:31,146 | INFO     | current memory leak: 13.12 B/s (using 874 data points, chi2=1.13)
[2025-11-27 23:52:04] 2025-11-28 04:51:31,147 | INFO     | could have reported an average CPU frequency of 3179 MHz (34 samples)
[2025-11-27 23:52:04] 2025-11-28 04:51:31,147 | INFO     | ..............................
[2025-11-27 23:52:04] 2025-11-28 04:51:31,147 | INFO     | . Timing measurements:
[2025-11-27 23:52:04] 2025-11-28 04:51:31,147 | INFO     | . get job = 0 s
[2025-11-27 23:52:04] 2025-11-28 04:51:31,147 | INFO     | . initial setup = 3 s
[2025-11-27 23:52:04] 2025-11-28 04:51:31,147 | INFO     | . payload setup = 17 s
[2025-11-27 23:52:04] 2025-11-28 04:51:31,147 | INFO     | . stage-in = 0 s
[2025-11-27 23:52:04] 2025-11-28 04:51:31,147 | INFO     | . payload execution = 55214 s
[2025-11-27 23:52:04] 2025-11-28 04:51:31,147 | INFO     | . stage-out = 3 s
[2025-11-27 23:52:04] 2025-11-28 04:51:31,148 | INFO     | . log creation = 0 s
[2025-11-27 23:52:04] 2025-11-28 04:51:31,148 | INFO     | ..............................
[2025-11-27 23:52:04] 2025-11-28 04:51:31,366 | INFO     | 
[2025-11-27 23:52:04] 2025-11-28 04:51:31,369 | INFO     | job summary report
[2025-11-27 23:52:04] 2025-11-28 04:51:31,369 | INFO     | --------------------------------------------------
[2025-11-27 23:52:04] 2025-11-28 04:51:31,369 | INFO     | PanDA job id: 6898271600
[2025-11-27 23:52:04] 2025-11-28 04:51:31,369 | INFO     | task id: 47556161
[2025-11-27 23:52:04] 2025-11-28 04:51:31,369 | INFO     | errors: (none)
[2025-11-27 23:52:04] 2025-11-28 04:51:31,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 23:52:04] 2025-11-28 04:51:31,369 | INFO     | pilot state: finished 
[2025-11-27 23:52:04] 2025-11-28 04:51:31,369 | INFO     | transexitcode: 0
[2025-11-27 23:52:04] 2025-11-28 04:51:31,370 | INFO     | exeerrorcode: 0
[2025-11-27 23:52:04] 2025-11-28 04:51:31,370 | INFO     | exeerrordiag: 
[2025-11-27 23:52:04] 2025-11-28 04:51:31,370 | INFO     | exitcode: 0
[2025-11-27 23:52:04] 2025-11-28 04:51:31,370 | INFO     | exitmsg: OK
[2025-11-27 23:52:04] 2025-11-28 04:51:31,370 | INFO     | cpuconsumptiontime: 187492 s
[2025-11-27 23:52:04] 2025-11-28 04:51:31,370 | INFO     | nevents: 1000
[2025-11-27 23:52:04] 2025-11-28 04:51:31,370 | INFO     | neventsw: 0
[2025-11-27 23:52:04] 2025-11-28 04:51:31,370 | INFO     | pid: 2145482
[2025-11-27 23:52:04] 2025-11-28 04:51:31,370 | INFO     | pgrp: 2145482
[2025-11-27 23:52:04] 2025-11-28 04:51:31,370 | INFO     | corecount: 8
[2025-11-27 23:52:04] 2025-11-28 04:51:31,370 | INFO     | event service: False
[2025-11-27 23:52:04] 2025-11-28 04:51:31,370 | INFO     | sizes: {0: 2284144, 1: 2284343, 11: 2284605, 12: 2284633, 55236: 2334328, 55240: 2343506, 55250: 2343696}
[2025-11-27 23:52:04] 2025-11-28 04:51:31,370 | INFO     | --------------------------------------------------
[2025-11-27 23:52:04] 2025-11-28 04:51:31,370 | INFO     | 
[2025-11-27 23:52:04] 2025-11-28 04:51:31,371 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 23:52:04] 2025-11-28 04:51:31,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,393 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,393 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,393 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,394 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,394 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,394 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,394 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,394 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,394 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 23:52:04] 2025-11-28 04:51:31,394 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,394 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 23:52:04] 2025-11-28 04:51:31,395 | INFO     | job 6898271600 has completed (purged errors)
[2025-11-27 23:52:04] 2025-11-28 04:51:31,395 | INFO     | overall cleanup function is called
[2025-11-27 23:52:04] 2025-11-28 04:51:32,412 | INFO     | --- collectZombieJob: --- 10, [2145482]
[2025-11-27 23:52:04] 2025-11-28 04:51:32,413 | INFO     | zombie collector waiting for pid 2145482
[2025-11-27 23:52:04] 2025-11-28 04:51:32,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 23:52:04] 2025-11-28 04:51:32,413 | INFO     | collected zombie processes
[2025-11-27 23:52:04] 2025-11-28 04:51:32,413 | INFO     | will attempt to kill all subprocesses of pid=2145482
[2025-11-27 23:52:04] 2025-11-28 04:51:33,056 | INFO     | process IDs to be killed: [2145482] (in reverse order)
[2025-11-27 23:52:04] 2025-11-28 04:51:33,261 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 23:52:04] 2025-11-28 04:51:33,263 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 23:52:04] 2025-11-28 04:51:33,291 | INFO     | did not find any defunct processes belonging to 2145482
[2025-11-27 23:52:04] 2025-11-28 04:51:33,322 | INFO     | did not find any defunct processes belonging to 2145482
[2025-11-27 23:52:04] 2025-11-28 04:51:33,324 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 23:52:04] 2025-11-28 04:51:33,324 | INFO     | ready for new job
[2025-11-27 23:52:04] 2025-11-28 04:51:33,324 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 23:52:04] 2025-11-28 04:51:33,328 | INFO     | ***************************************
[2025-11-27 23:52:04] 2025-11-28 04:51:33,328 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 23:52:04] 2025-11-28 04:51:33,331 | INFO     | ***************************************
[2025-11-27 23:52:04] 2025-11-28 04:51:33,331 | INFO     | 
[2025-11-27 23:52:04] 2025-11-28 04:51:33,352 | INFO     | architecture information:
[2025-11-27 23:52:04] 2025-11-28 04:51:33,353 | INFO     | executing command: cat /etc/os-release
[2025-11-27 23:52:04] 2025-11-28 04:51:33,375 | INFO     | cat /etc/os-release:
[2025-11-27 23:52:04] NAME="CentOS Linux"
[2025-11-27 23:52:04] VERSION="7 (Core)"
[2025-11-27 23:52:04] ID="centos"
[2025-11-27 23:52:04] ID_LIKE="rhel fedora"
[2025-11-27 23:52:04] VERSION_ID="7"
[2025-11-27 23:52:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 23:52:04] ANSI_COLOR="0;31"
[2025-11-27 23:52:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 23:52:04] HOME_URL="https://www.centos.org/"
[2025-11-27 23:52:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 23:52:04] 
[2025-11-27 23:52:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 23:52:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 23:52:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 23:52:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 23:52:04] 
[2025-11-27 23:52:04] 2025-11-28 04:51:33,375 | INFO     | ***************************************
[2025-11-27 23:52:04] 2025-11-28 04:51:33,883 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 23:52:04] 2025-11-28 04:51:33,921 | INFO     | sufficient remaining disk space (69573017600 B)
[2025-11-27 23:52:04] 2025-11-28 04:51:33,921 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 23:52:04] 2025-11-28 04:51:33,921 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 23:52:04] 2025-11-28 04:51:33,921 | INFO     | update_server=False
[2025-11-27 23:52:04] 2025-11-28 04:51:33,921 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 23:52:04] 2025-11-28 04:51:33,922 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:52:04] 2025-11-28 04:51:33,922 | INFO     | aborting loop
[2025-11-27 23:52:04] 2025-11-28 04:51:34,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 23:52:04] 2025-11-28 04:51:34,373 | INFO     | all payload control threads have been joined
[2025-11-27 23:52:04] 2025-11-28 04:51:34,720 | INFO     | all job control threads have been joined
[2025-11-27 23:52:04] 2025-11-28 04:51:34,865 | INFO     | all data control threads have been joined
[2025-11-27 23:52:04] 2025-11-28 04:51:34,936 | INFO     | [job] retrieve thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:34,937 | INFO     | [job] job monitor thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:35,279 | INFO     | [job] validate thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:35,379 | INFO     | [payload] control thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:35,577 | INFO     | [data] copytool_in thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:35,584 | INFO     | [payload] validate_post thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:35,726 | INFO     | [job] control thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:35,871 | INFO     | [data] control thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:35,926 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:36,143 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:36,237 | INFO     | [payload] failed_post thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:36,238 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:52:04] 2025-11-28 04:51:36,304 | INFO     | [data] copytool_out thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:36,419 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:36,423 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:36,433 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 23:52:04] 2025-11-28 04:51:37,244 | INFO     | [job] queue monitor thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:40,443 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 23:52:04] 2025-11-28 04:51:57,555 | INFO     | [monitor] cgroup control has ended
[2025-11-27 23:52:04] 2025-11-28 04:51:58,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328645863232)>', '<ExcThread(monitor, started 140328292038400)>']
[2025-11-27 23:52:04] 2025-11-28 04:52:03,859 | INFO     | PID=2137349 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 23:52:04] 2025-11-28 04:52:03,859 | INFO     | .. there are 74 such processes running
[2025-11-27 23:52:04] 2025-11-28 04:52:03,860 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 23:52:04] 2025-11-28 04:52:03,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 23:52:04] 2025-11-28 04:52:03,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 23:52:04] 2025-11-28 04:52:03,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 23:52:04] 2025-11-28 04:52:03,860 | INFO     | [monitor] control thread has ended
[2025-11-27 23:52:04] 2025-11-28 04:52:03,895 | INFO     | all workflow threads have been joined
[2025-11-27 23:52:04] 2025-11-28 04:52:03,895 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 23:52:04] 2025-11-28 04:52:03,899 | INFO     | traces error code: 0
[2025-11-27 23:52:04] 2025-11-28 04:52:03,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 23:52:04] 2025-11-28 04:52:04,066 [wrapper] ==== pilot stdout END ====
[2025-11-27 23:52:04] 2025-11-28 04:52:04,069 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 23:52:04] 2025-11-28 04:52:04,077 [wrapper] pilotpid: 2137349
[2025-11-27 23:52:04] 2025-11-28 04:52:04,116 [wrapper] Pilot exit status: 0
[2025-11-27 23:52:04] 2025-11-28 04:52:04,137 [wrapper] pandaids: 6898271600
[2025-11-27 23:52:04] 2025-11-28 04:52:04,317 [wrapper] cleanup supervisor_pilot 2971545 2137350
[2025-11-27 23:52:04] 2025-11-28 04:52:04,322 [wrapper] Test setup, not cleaning
[2025-11-27 23:52:04] 2025-11-28 04:52:04,325 [wrapper] apfmon messages muted
[2025-11-27 23:52:04] 2025-11-28 04:52:04,329 [wrapper] ==== wrapper stdout END ====
[2025-11-27 23:52:04] 2025-11-28 04:52:04,332 [wrapper] ==== wrapper stderr END ====
[2025-11-27 23:52:04]  *** Error codes and diagnostics ***
[2025-11-27 23:52:04]     "exeErrorCode": 0,
[2025-11-27 23:52:04]     "exeErrorDiag": "",
[2025-11-27 23:52:04]     "pilotErrorCode": 0,
[2025-11-27 23:52:04]     "pilotErrorDiag": "",
[2025-11-27 23:52:04]  *** Listing of results directory ***
[2025-11-27 23:52:04] total 1320608
[2025-11-27 23:52:04] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 10:05 pilot3.tar.gz
[2025-11-27 23:52:04] -rwx------. 1 boincer umatlas     36292 Nov 26 10:26 runpilot2-wrapper.sh
[2025-11-27 23:52:04] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 10:26 queuedata.json
[2025-11-27 23:52:04] -rw-r--r--. 1 boincer umatlas       100 Nov 27 08:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 23:52:04] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 08:29 run_atlas
[2025-11-27 23:52:04] -rw-r--r--. 1 boincer umatlas       105 Nov 27 08:29 job.xml
[2025-11-27 23:52:04] -rw-r--r--. 2 boincer umatlas 413044292 Nov 27 08:29 EVNT.47483658._002542.pool.root.1
[2025-11-27 23:52:04] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 08:29 input.tar.gz
[2025-11-27 23:52:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 08:29 start_atlas.sh
[2025-11-27 23:52:04] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 08:29 shared
[2025-11-27 23:52:04] -rw-r--r--. 1 boincer umatlas         0 Nov 27 08:29 boinc_lockfile
[2025-11-27 23:52:04] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 08:29 pandaJob.out
[2025-11-27 23:52:04] -rw-r--r--. 1 boincer umatlas      2075 Nov 27 08:29 stderr.txt
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas        57 Nov 27 08:29 setup.sh.local
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas    991566 Nov 27 08:30 agis_schedconf.cvmfs.json
[2025-11-27 23:52:04] drwx------. 5 boincer umatlas      4096 Nov 27 08:30 pilot3
[2025-11-27 23:52:04] -rw-r--r--. 1 boincer umatlas       532 Nov 27 23:43 boinc_task_state.xml
[2025-11-27 23:52:04] -rw-r--r--. 1 boincer umatlas      6946 Nov 27 23:47 init_data.xml
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas 917925388 Nov 27 23:50 HITS.47556161._005246.pool.root.1
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas      1072 Nov 27 23:51 memory_monitor_summary.json
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas   1516240 Nov 27 23:51 agis_ddmendpoints.agis.ALL.json
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas   2053740 Nov 27 23:51 log.47556161._005246.job.log.tgz.1
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas        95 Nov 27 23:51 pilot_heartbeat.json
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas      8644 Nov 27 23:51 heartbeat.json
[2025-11-27 23:52:04] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 23:52 boinc_mmap_file
[2025-11-27 23:52:04] -rw-r--r--. 1 boincer umatlas        29 Nov 27 23:52 wrapper_checkpoint.txt
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas      4824 Nov 27 23:52 pilotlog.txt
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas   6663436 Nov 27 23:52 log.47556161._005246.job.log.1
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas       353 Nov 27 23:52 output.list
[2025-11-27 23:52:04] -rw-r--r--. 1 boincer umatlas       620 Nov 27 23:52 runtime_log
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas   8734720 Nov 27 23:52 result.tar.gz
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas       664 Nov 27 23:52 VuqMDm9aWi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmb4MKDmq4ioQm.diag
[2025-11-27 23:52:04] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 23:52 runtime_log.err
[2025-11-27 23:52:04] HITS file was successfully produced:
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas 917925388 Nov 27 23:50 shared/HITS.pool.root.1
[2025-11-27 23:52:04]  *** Contents of shared directory: ***
[2025-11-27 23:52:04] total 1308912
[2025-11-27 23:52:04] -rw-r--r--. 2 boincer umatlas 413044292 Nov 27 08:29 ATLAS.root_0
[2025-11-27 23:52:04] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 08:29 input.tar.gz
[2025-11-27 23:52:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 08:29 start_atlas.sh
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas 917925388 Nov 27 23:50 HITS.pool.root.1
[2025-11-27 23:52:04] -rw-------. 1 boincer umatlas   8734720 Nov 27 23:52 result.tar.gz
23:52:06 (2131688): run_atlas exited; CPU time 189030.242851
23:52:06 (2131688): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN