Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:13:30 (4006307): wrapper (7.7.26015): starting
07:13:30 (4006307): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 07:13:30] Arguments: --nthreads 8
[2025-11-27 07:13:30] Threads: 8
[2025-11-27 07:13:30] Checking for CVMFS
[2025-11-27 07:13:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 07:13:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 07:13:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 07:13:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 07:13:31] 2.13.3.0 10223 31453 229928 153363 2 178 39941676 40960001 50503 16776704 0 410235315 99.761 260056399 51005 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 07:13:31] CVMFS is ok
[2025-11-27 07:13:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 07:13:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 07:13:31] Further information can be found at the LHC@home message board.
[2025-11-27 07:13:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 07:13:31] Checking for apptainer binary...
[2025-11-27 07:13:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 07:13:31] Running /usr/bin/apptainer --version
[2025-11-27 07:13:31] apptainer version 1.4.4-1.el9
[2025-11-27 07:13:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 07:13:31] c8-7-6.aglt2.org
[2025-11-27 07:13:31] apptainer works
[2025-11-27 07:13:31] Set ATHENA_PROC_NUMBER=8
[2025-11-27 07:13:31] Set ATHENA_CORE_NUMBER=8
[2025-11-27 07:13:32] Starting ATLAS job with PandaID=6898271604
[2025-11-27 07:13:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:41:44]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:41:44] 2025-11-27 17:41:00,413 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 12:41:44] 2025-11-27 17:41:00,418 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3765.091921875002
[2025-11-27 12:41:44] 2025-11-27 17:41:00,430 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6898271604/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 12:41:44] 2025-11-27 17:41:00,431 | INFO     | extracted standard info from prmon json
[2025-11-27 12:41:44] 2025-11-27 17:41:00,431 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 12:41:44] 2025-11-27 17:41:00,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 12:41:44] 2025-11-27 17:41:00,434 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:41:44] 2025-11-27 17:41:00,435 | INFO     | sum of square deviations: 10255993596.261644
[2025-11-27 12:41:44] 2025-11-27 17:41:00,436 | INFO     | sum of deviations: 137793223014.0748
[2025-11-27 12:41:44] 2025-11-27 17:41:00,436 | INFO     | mean x: 1764255482.1214952
[2025-11-27 12:41:44] 2025-11-27 17:41:00,436 | INFO     | mean y: 2854158.510903427
[2025-11-27 12:41:44] 2025-11-27 17:41:00,436 | INFO     | intersect: -23700597566.574337
[2025-11-27 12:41:44] 2025-11-27 17:41:00,437 | INFO     | chi2: 4.67883402933188
[2025-11-27 12:41:44] 2025-11-27 17:41:00,437 | INFO     | sum of square deviations: 9784164086.186745
[2025-11-27 12:41:44] 2025-11-27 17:41:00,439 | INFO     | sum of deviations: 224465276179.12338
[2025-11-27 12:41:44] 2025-11-27 17:41:00,439 | INFO     | mean x: 1764255329.6234176
[2025-11-27 12:41:44] 2025-11-27 17:41:00,439 | INFO     | mean y: 2882074.496835443
[2025-11-27 12:41:44] 2025-11-27 17:41:00,439 | INFO     | intersect: -40472119808.75064
[2025-11-27 12:41:44] 2025-11-27 17:41:00,439 | INFO     | chi2: 2.2316067955219103
[2025-11-27 12:41:44] 2025-11-27 17:41:00,439 | INFO     | current chi2=2.2316067955219103 (change=52.30421123015181 %)
[2025-11-27 12:41:44] 2025-11-27 17:41:00,440 | INFO     | sum of square deviations: 9327032526.109413
[2025-11-27 12:41:44] 2025-11-27 17:41:00,441 | INFO     | sum of deviations: 217584476614.63022
[2025-11-27 12:41:44] 2025-11-27 17:41:00,441 | INFO     | mean x: 1764255177.125402
[2025-11-27 12:41:44] 2025-11-27 17:41:00,441 | INFO     | mean y: 2879778.9581993567
[2025-11-27 12:41:44] 2025-11-27 17:41:00,441 | INFO     | intersect: -41154319818.54422
[2025-11-27 12:41:44] 2025-11-27 17:41:00,441 | INFO     | chi2: 2.2313619616932203
[2025-11-27 12:41:44] 2025-11-27 17:41:00,441 | INFO     | current chi2=2.2313619616932203 (change=0.010971190318173663 %)
[2025-11-27 12:41:44] 2025-11-27 17:41:00,441 | INFO     | right removable region: 310
[2025-11-27 12:41:44] 2025-11-27 17:41:00,442 | INFO     | sum of square deviations: 9784159754.43044
[2025-11-27 12:41:44] 2025-11-27 17:41:00,443 | INFO     | sum of deviations: 57729391611.43045
[2025-11-27 12:41:44] 2025-11-27 17:41:00,443 | INFO     | mean x: 1764255634.620253
[2025-11-27 12:41:44] 2025-11-27 17:41:00,443 | INFO     | mean y: 2879909.620253165
[2025-11-27 12:41:44] 2025-11-27 17:41:00,443 | INFO     | intersect: -10406742070.18707
[2025-11-27 12:41:44] 2025-11-27 17:41:00,443 | INFO     | chi2: 2.558820895154958
[2025-11-27 12:41:44] 2025-11-27 17:41:00,443 | INFO     | current chi2=2.558820895154958 (change=45.310714611512985 %)
[2025-11-27 12:41:44] 2025-11-27 17:41:00,444 | INFO     | sum of square deviations: 9327043137.832739
[2025-11-27 12:41:44] 2025-11-27 17:41:00,445 | INFO     | sum of deviations: 42091379980.8746
[2025-11-27 12:41:44] 2025-11-27 17:41:00,445 | INFO     | mean x: 1764255787.1157556
[2025-11-27 12:41:44] 2025-11-27 17:41:00,445 | INFO     | mean y: 2885117.08681672
[2025-11-27 12:41:44] 2025-11-27 17:41:00,445 | INFO     | intersect: -7958905090.329503
[2025-11-27 12:41:44] 2025-11-27 17:41:00,445 | INFO     | chi2: 2.522335428877385
[2025-11-27 12:41:44] 2025-11-27 17:41:00,445 | INFO     | current chi2=2.522335428877385 (change=1.4258702649590242 %)
[2025-11-27 12:41:44] 2025-11-27 17:41:00,446 | INFO     | left removable region: 20
[2025-11-27 12:41:44] 2025-11-27 17:41:00,446 | INFO     | sum of square deviations: 7562332686.513767
[2025-11-27 12:41:44] 2025-11-27 17:41:00,447 | INFO     | sum of deviations: 100507087047.52756
[2025-11-27 12:41:44] 2025-11-27 17:41:00,447 | INFO     | mean x: 1764255756.6172414
[2025-11-27 12:41:44] 2025-11-27 17:41:00,447 | INFO     | mean y: 2920062.7344827587
[2025-11-27 12:41:44] 2025-11-27 17:41:00,447 | INFO     | intersect: -23444898785.628723
[2025-11-27 12:41:44] 2025-11-27 17:41:00,447 | INFO     | chi2: 0.01420153196203138
[2025-11-27 12:41:44] 2025-11-27 17:41:00,447 | INFO     | current memory leak: 13.29 B/s (using 290 data points, chi2=0.01)
[2025-11-27 12:41:44] 2025-11-27 17:41:00,448 | INFO     | could have reported an average CPU frequency of 3792 MHz (14 samples)
[2025-11-27 12:41:44] 2025-11-27 17:41:00,448 | INFO     | ..............................
[2025-11-27 12:41:44] 2025-11-27 17:41:00,448 | INFO     | . Timing measurements:
[2025-11-27 12:41:44] 2025-11-27 17:41:00,448 | INFO     | . get job = 0 s
[2025-11-27 12:41:44] 2025-11-27 17:41:00,448 | INFO     | . initial setup = 3 s
[2025-11-27 12:41:44] 2025-11-27 17:41:00,448 | INFO     | . payload setup = 21 s
[2025-11-27 12:41:44] 2025-11-27 17:41:00,448 | INFO     | . stage-in = 0 s
[2025-11-27 12:41:44] 2025-11-27 17:41:00,448 | INFO     | . payload execution = 19539 s
[2025-11-27 12:41:44] 2025-11-27 17:41:00,448 | INFO     | . stage-out = 2 s
[2025-11-27 12:41:44] 2025-11-27 17:41:00,448 | INFO     | . log creation = 0 s
[2025-11-27 12:41:44] 2025-11-27 17:41:00,448 | INFO     | ..............................
[2025-11-27 12:41:44] 2025-11-27 17:41:00,500 | INFO     | 
[2025-11-27 12:41:44] 2025-11-27 17:41:00,500 | INFO     | job summary report
[2025-11-27 12:41:44] 2025-11-27 17:41:00,500 | INFO     | --------------------------------------------------
[2025-11-27 12:41:44] 2025-11-27 17:41:00,500 | INFO     | PanDA job id: 6898271604
[2025-11-27 12:41:44] 2025-11-27 17:41:00,500 | INFO     | task id: 47556161
[2025-11-27 12:41:44] 2025-11-27 17:41:00,500 | INFO     | errors: (none)
[2025-11-27 12:41:44] 2025-11-27 17:41:00,500 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:41:44] 2025-11-27 17:41:00,500 | INFO     | pilot state: finished 
[2025-11-27 12:41:44] 2025-11-27 17:41:00,500 | INFO     | transexitcode: 0
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | exeerrorcode: 0
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | exeerrordiag: 
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | exitcode: 0
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | exitmsg: OK
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | cpuconsumptiontime: 133680 s
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | nevents: 1000
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | neventsw: 0
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | pid: 4033161
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | pgrp: 4033161
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | corecount: 8
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | event service: False
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | sizes: {0: 2284315, 11: 2284315, 15: 2284605, 22: 2284633, 19565: 2319078, 19568: 2328072, 19569: 2328256, 19577: 2328502}
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | --------------------------------------------------
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | 
[2025-11-27 12:41:44] 2025-11-27 17:41:00,501 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 12:41:44] 2025-11-27 17:41:00,512 | INFO     | time since job start (19616s) is within the limit (172800.0s)
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,516 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:41:44] 2025-11-27 17:41:00,517 | INFO     | job 6898271604 has completed (purged errors)
[2025-11-27 12:41:44] 2025-11-27 17:41:00,517 | INFO     | overall cleanup function is called
[2025-11-27 12:41:44] 2025-11-27 17:41:01,530 | INFO     | --- collectZombieJob: --- 10, [4033161]
[2025-11-27 12:41:44] 2025-11-27 17:41:01,530 | INFO     | zombie collector waiting for pid 4033161
[2025-11-27 12:41:44] 2025-11-27 17:41:01,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:41:44] 2025-11-27 17:41:01,530 | INFO     | collected zombie processes
[2025-11-27 12:41:44] 2025-11-27 17:41:01,530 | INFO     | will attempt to kill all subprocesses of pid=4033161
[2025-11-27 12:41:44] 2025-11-27 17:41:02,128 | INFO     | process IDs to be killed: [4033161] (in reverse order)
[2025-11-27 12:41:44] 2025-11-27 17:41:02,375 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:41:44] 2025-11-27 17:41:02,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:41:44] 2025-11-27 17:41:02,406 | INFO     | did not find any defunct processes belonging to 4033161
[2025-11-27 12:41:44] 2025-11-27 17:41:02,436 | INFO     | did not find any defunct processes belonging to 4033161
[2025-11-27 12:41:44] 2025-11-27 17:41:02,437 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:41:44] 2025-11-27 17:41:02,438 | INFO     | ready for new job
[2025-11-27 12:41:44] 2025-11-27 17:41:02,438 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:41:44] 2025-11-27 17:41:02,440 | INFO     | ***************************************
[2025-11-27 12:41:44] 2025-11-27 17:41:02,440 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:41:44] 2025-11-27 17:41:02,440 | INFO     | ***************************************
[2025-11-27 12:41:44] 2025-11-27 17:41:02,440 | INFO     | 
[2025-11-27 12:41:44] 2025-11-27 17:41:02,445 | INFO     | architecture information:
[2025-11-27 12:41:44] 2025-11-27 17:41:02,445 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:41:44] 2025-11-27 17:41:02,462 | INFO     | cat /etc/os-release:
[2025-11-27 12:41:44] NAME="CentOS Linux"
[2025-11-27 12:41:44] VERSION="7 (Core)"
[2025-11-27 12:41:44] ID="centos"
[2025-11-27 12:41:44] ID_LIKE="rhel fedora"
[2025-11-27 12:41:44] VERSION_ID="7"
[2025-11-27 12:41:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:41:44] ANSI_COLOR="0;31"
[2025-11-27 12:41:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:41:44] HOME_URL="https://www.centos.org/"
[2025-11-27 12:41:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:41:44] 
[2025-11-27 12:41:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:41:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:41:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:41:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:41:44] 
[2025-11-27 12:41:44] 2025-11-27 17:41:02,462 | INFO     | ***************************************
[2025-11-27 12:41:44] 2025-11-27 17:41:02,966 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 12:41:44] 2025-11-27 17:41:02,999 | INFO     | sufficient remaining disk space (163707879424 B)
[2025-11-27 12:41:44] 2025-11-27 17:41:02,999 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:41:44] 2025-11-27 17:41:03,000 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:41:44] 2025-11-27 17:41:03,000 | INFO     | update_server=False
[2025-11-27 12:41:44] 2025-11-27 17:41:03,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:41:44] 2025-11-27 17:41:03,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:41:44] 2025-11-27 17:41:03,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:41:44] 2025-11-27 17:41:03,372 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 12:41:44] 2025-11-27 17:41:03,372 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 12:41:44] 2025-11-27 17:41:03,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:41:44] 2025-11-27 17:41:03,372 | INFO     | will abort loop
[2025-11-27 12:41:44] 2025-11-27 17:41:03,401 | INFO     | all payload control threads have been joined
[2025-11-27 12:41:44] 2025-11-27 17:41:03,598 | INFO     | all job control threads have been joined
[2025-11-27 12:41:44] 2025-11-27 17:41:03,948 | INFO     | all data control threads have been joined
[2025-11-27 12:41:44] 2025-11-27 17:41:04,007 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:04,229 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:04,340 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:04,378 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:04,407 | INFO     | [payload] control thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:04,473 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:04,528 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:04,608 | INFO     | [job] control thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:04,953 | INFO     | [data] control thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:05,022 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:05,063 | INFO     | [job] validate thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:05,196 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:05,207 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:05,238 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:05,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:41:44] 2025-11-27 17:41:06,531 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:07,199 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:41:44] 2025-11-27 17:41:34,288 | INFO     | PID=4011648 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 12:41:44] 2025-11-27 17:41:34,290 | INFO     | .. there are 64 such processes running
[2025-11-27 12:41:44] 2025-11-27 17:41:34,290 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:41:44] 2025-11-27 17:41:34,290 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:41:44] 2025-11-27 17:41:34,290 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:41:44] 2025-11-27 17:41:37,385 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:41:44] 2025-11-27 17:41:39,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140512474150720)>', '<ExcThread(monitor, started 140511960606464)>']
[2025-11-27 12:41:44] 2025-11-27 17:41:39,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:41:44] 2025-11-27 17:41:39,322 | INFO     | [monitor] control thread has ended
[2025-11-27 12:41:44] 2025-11-27 17:41:44,052 | INFO     | all workflow threads have been joined
[2025-11-27 12:41:44] 2025-11-27 17:41:44,052 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:41:44] 2025-11-27 17:41:44,052 | INFO     | traces error code: 0
[2025-11-27 12:41:44] 2025-11-27 17:41:44,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:41:44] 2025-11-27 17:41:44,186 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:41:44] 2025-11-27 17:41:44,193 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:41:44] 2025-11-27 17:41:44,196 [wrapper] pilotpid: 4011648
[2025-11-27 12:41:44] 2025-11-27 17:41:44,203 [wrapper] Pilot exit status: 0
[2025-11-27 12:41:44] 2025-11-27 17:41:44,234 [wrapper] pandaids: 6898271604
[2025-11-27 12:41:44] 2025-11-27 17:41:44,380 [wrapper] cleanup supervisor_pilot 1911140 4011649
[2025-11-27 12:41:44] 2025-11-27 17:41:44,384 [wrapper] Test setup, not cleaning
[2025-11-27 12:41:44] 2025-11-27 17:41:44,387 [wrapper] apfmon messages muted
[2025-11-27 12:41:44] 2025-11-27 17:41:44,390 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:41:44] 2025-11-27 17:41:44,397 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:41:44]  *** Error codes and diagnostics ***
[2025-11-27 12:41:44]     "exeErrorCode": 0,
[2025-11-27 12:41:44]     "exeErrorDiag": "",
[2025-11-27 12:41:44]     "pilotErrorCode": 0,
[2025-11-27 12:41:44]     "pilotErrorDiag": "",
[2025-11-27 12:41:44]  *** Listing of results directory ***
[2025-11-27 12:41:44] total 1313384
[2025-11-27 12:41:44] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 10:05 pilot3.tar.gz
[2025-11-27 12:41:44] -rwx------. 1 boincer umatlas     36292 Nov 26 10:26 runpilot2-wrapper.sh
[2025-11-27 12:41:44] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 10:26 queuedata.json
[2025-11-27 12:41:44] -rw-r--r--. 1 boincer umatlas       100 Nov 27 07:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:41:44] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 07:13 run_atlas
[2025-11-27 12:41:44] -rw-r--r--. 1 boincer umatlas       105 Nov 27 07:13 job.xml
[2025-11-27 12:41:44] -rw-r--r--. 2 boincer umatlas 413044292 Nov 27 07:13 EVNT.47483658._002542.pool.root.1
[2025-11-27 12:41:44] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 07:13 start_atlas.sh
[2025-11-27 12:41:44] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 07:13 shared
[2025-11-27 12:41:44] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 07:13 input.tar.gz
[2025-11-27 12:41:44] -rw-r--r--. 1 boincer umatlas         0 Nov 27 07:13 boinc_lockfile
[2025-11-27 12:41:44] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 07:13 pandaJob.out
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas        57 Nov 27 07:13 setup.sh.local
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas    991572 Nov 27 07:14 agis_schedconf.cvmfs.json
[2025-11-27 12:41:44] drwx------. 5 boincer umatlas      4096 Nov 27 07:14 pilot3
[2025-11-27 12:41:44] -rw-r--r--. 1 boincer umatlas       533 Nov 27 12:36 boinc_task_state.xml
[2025-11-27 12:41:44] -rw-r--r--. 1 boincer umatlas      7174 Nov 27 12:40 init_data.xml
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas 919337260 Nov 27 12:40 HITS.47556161._005250.pool.root.1
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas      1070 Nov 27 12:40 memory_monitor_summary.json
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas   1516240 Nov 27 12:40 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas   1633385 Nov 27 12:40 log.47556161._005250.job.log.tgz.1
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas        95 Nov 27 12:40 pilot_heartbeat.json
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas      8589 Nov 27 12:41 heartbeat.json
[2025-11-27 12:41:44] -rw-r--r--. 1 boincer umatlas        29 Nov 27 12:41 wrapper_checkpoint.txt
[2025-11-27 12:41:44] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 12:41 boinc_mmap_file
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas      5011 Nov 27 12:41 pilotlog.txt
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas   2666622 Nov 27 12:41 log.47556161._005250.job.log.1
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas       353 Nov 27 12:41 output.list
[2025-11-27 12:41:44] -rw-r--r--. 1 boincer umatlas       620 Nov 27 12:41 runtime_log
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas   4321280 Nov 27 12:41 result.tar.gz
[2025-11-27 12:41:44] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 12:41 runtime_log.err
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas       659 Nov 27 12:41 iQvMDm9aWi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmf4MKDmofHr3n.diag
[2025-11-27 12:41:44] -rw-r--r--. 1 boincer umatlas     21314 Nov 27 12:41 stderr.txt
[2025-11-27 12:41:44] HITS file was successfully produced:
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas 919337260 Nov 27 12:40 shared/HITS.pool.root.1
[2025-11-27 12:41:44]  *** Contents of shared directory: ***
[2025-11-27 12:41:44] total 1305980
[2025-11-27 12:41:44] -rw-r--r--. 2 boincer umatlas 413044292 Nov 27 07:13 ATLAS.root_0
[2025-11-27 12:41:44] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 07:13 start_atlas.sh
[2025-11-27 12:41:44] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 07:13 input.tar.gz
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas 919337260 Nov 27 12:40 HITS.pool.root.1
[2025-11-27 12:41:44] -rw-------. 1 boincer umatlas   4321280 Nov 27 12:41 result.tar.gz
12:41:46 (4006307): run_atlas exited; CPU time 134020.888145
12:41:46 (4006307): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN