Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:58:53 (3363342): wrapper (7.7.26015): starting
06:58:53 (3363342): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 06:58:53] Arguments: --nthreads 8
[2025-11-27 06:58:53] Threads: 8
[2025-11-27 06:58:53] Checking for CVMFS
[2025-11-27 06:58:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 06:58:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 06:58:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 06:58:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 06:58:55] 2.13.3.0 7385 31397 258992 153362 0 498 26945410 32503809 74056 16776704 0 458483737 99.666 388889265 48664 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 06:58:55] CVMFS is ok
[2025-11-27 06:58:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 06:58:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 06:58:55] Further information can be found at the LHC@home message board.
[2025-11-27 06:58:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 06:58:55] Checking for apptainer binary...
[2025-11-27 06:58:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 06:58:55] Running /usr/bin/apptainer --version
[2025-11-27 06:58:55] apptainer version 1.4.4-1.el9
[2025-11-27 06:58:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 06:58:56] c8-7-1.aglt2.org
[2025-11-27 06:58:56] apptainer works
[2025-11-27 06:58:56] Set ATHENA_PROC_NUMBER=8
[2025-11-27 06:58:56] Set ATHENA_CORE_NUMBER=8
[2025-11-27 06:58:56] Starting ATLAS job with PandaID=6898271553
[2025-11-27 06:58:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:25:09]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:25:09] 2025-11-27 20:24:20,916 | INFO     | time since job start (30267s) is within the limit (172800.0s)
[2025-11-27 15:25:09] 2025-11-27 20:24:22,922 | INFO     | time since job start (30269s) is within the limit (172800.0s)
[2025-11-27 15:25:09] 2025-11-27 20:24:23,209 | INFO     | monitor loop #1684: job 0:6898271553 is in state 'finished'
[2025-11-27 15:25:09] 2025-11-27 20:24:23,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:25:09] 2025-11-27 20:24:24,930 | INFO     | time since job start (30271s) is within the limit (172800.0s)
[2025-11-27 15:25:09] 2025-11-27 20:24:25,714 | INFO     | monitor loop #1685: job 0:6898271553 is in state 'finished'
[2025-11-27 15:25:09] 2025-11-27 20:24:25,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:25:09] 2025-11-27 20:24:26,939 | INFO     | time since job start (30273s) is within the limit (172800.0s)
[2025-11-27 15:25:09] 2025-11-27 20:24:28,222 | INFO     | monitor loop #1686: job 0:6898271553 is in state 'finished'
[2025-11-27 15:25:09] 2025-11-27 20:24:28,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:25:09] 2025-11-27 20:24:28,959 | INFO     | time since job start (30275s) is within the limit (172800.0s)
[2025-11-27 15:25:09] 2025-11-27 20:24:30,750 | INFO     | monitor loop #1687: job 0:6898271553 is in state 'finished'
[2025-11-27 15:25:09] 2025-11-27 20:24:30,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:25:09] 2025-11-27 20:24:30,968 | INFO     | time since job start (30277s) is within the limit (172800.0s)
[2025-11-27 15:25:09] 2025-11-27 20:24:32,974 | INFO     | time since job start (30279s) is within the limit (172800.0s)
[2025-11-27 15:25:09] 2025-11-27 20:24:33,261 | INFO     | monitor loop #1688: job 0:6898271553 is in state 'finished'
[2025-11-27 15:25:09] 2025-11-27 20:24:33,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:25:09] 2025-11-27 20:24:33,715 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 15:25:09] 2025-11-27 20:24:33,728 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3775.1367890624997
[2025-11-27 15:25:09] 2025-11-27 20:24:33,759 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6898271553/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:25:09] 2025-11-27 20:24:33,760 | INFO     | extracted standard info from prmon json
[2025-11-27 15:25:09] 2025-11-27 20:24:33,760 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:25:09] 2025-11-27 20:24:33,760 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:25:09] 2025-11-27 20:24:33,786 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:25:09] 2025-11-27 20:24:33,787 | INFO     | sum of square deviations: 37382250063.02829
[2025-11-27 15:25:09] 2025-11-27 20:24:33,790 | INFO     | sum of deviations: 242520985228.3075
[2025-11-27 15:25:09] 2025-11-27 20:24:33,790 | INFO     | mean x: 1764259954.4048584
[2025-11-27 15:25:09] 2025-11-27 20:24:33,790 | INFO     | mean y: 2794965.0384615385
[2025-11-27 15:25:09] 2025-11-27 20:24:33,790 | INFO     | intersect: -11443013182.403316
[2025-11-27 15:25:09] 2025-11-27 20:24:33,790 | INFO     | chi2: 17.548358861565408
[2025-11-27 15:25:09] 2025-11-27 20:24:33,791 | INFO     | sum of square deviations: 36258704814.04085
[2025-11-27 15:25:09] 2025-11-27 20:24:33,794 | INFO     | sum of deviations: 404164387237.98145
[2025-11-27 15:25:09] 2025-11-27 20:24:33,794 | INFO     | mean x: 1764259801.9100204
[2025-11-27 15:25:09] 2025-11-27 20:24:33,794 | INFO     | mean y: 2816914.8404907975
[2025-11-27 15:25:09] 2025-11-27 20:24:33,794 | INFO     | intersect: -19662832628.478096
[2025-11-27 15:25:09] 2025-11-27 20:24:33,794 | INFO     | chi2: 14.124166550952058
[2025-11-27 15:25:09] 2025-11-27 20:24:33,794 | INFO     | current chi2=14.124166550952058 (change=19.512891989649532 %)
[2025-11-27 15:25:09] 2025-11-27 20:24:33,794 | INFO     | right removable region: 488
[2025-11-27 15:25:09] 2025-11-27 20:24:33,794 | INFO     | sum of square deviations: 36258492656.39259
[2025-11-27 15:25:09] 2025-11-27 20:24:33,797 | INFO     | sum of deviations: 54179277437.07978
[2025-11-27 15:25:09] 2025-11-27 20:24:33,797 | INFO     | mean x: 1764260106.9141104
[2025-11-27 15:25:09] 2025-11-27 20:24:33,797 | INFO     | mean y: 2820518.263803681
[2025-11-27 15:25:09] 2025-11-27 20:24:33,797 | INFO     | intersect: -2633426352.49019
[2025-11-27 15:25:09] 2025-11-27 20:24:33,798 | INFO     | chi2: 13.531838910901344
[2025-11-27 15:25:09] 2025-11-27 20:24:33,798 | INFO     | current chi2=13.531838910901344 (change=22.88829389887328 %)
[2025-11-27 15:25:09] 2025-11-27 20:24:33,798 | INFO     | left removable region: 10
[2025-11-27 15:25:09] 2025-11-27 20:24:33,798 | INFO     | sum of square deviations: 33866227739.221684
[2025-11-27 15:25:09] 2025-11-27 20:24:33,801 | INFO     | sum of deviations: 98001085146.07991
[2025-11-27 15:25:09] 2025-11-27 20:24:33,801 | INFO     | mean x: 1764260076.4309623
[2025-11-27 15:25:09] 2025-11-27 20:24:33,801 | INFO     | mean y: 2870350.3054393306
[2025-11-27 15:25:09] 2025-11-27 20:24:33,801 | INFO     | intersect: -5102493119.801367
[2025-11-27 15:25:09] 2025-11-27 20:24:33,801 | INFO     | chi2: 6.42418015214506
[2025-11-27 15:25:09] 2025-11-27 20:24:33,801 | INFO     | current memory leak: 2.89 B/s (using 478 data points, chi2=6.42)
[2025-11-27 15:25:09] 2025-11-27 20:24:33,802 | INFO     | could have reported an average CPU frequency of 3796 MHz (20 samples)
[2025-11-27 15:25:09] 2025-11-27 20:24:33,802 | INFO     | ..............................
[2025-11-27 15:25:09] 2025-11-27 20:24:33,802 | INFO     | . Timing measurements:
[2025-11-27 15:25:09] 2025-11-27 20:24:33,802 | INFO     | . get job = 0 s
[2025-11-27 15:25:09] 2025-11-27 20:24:33,802 | INFO     | . initial setup = 3 s
[2025-11-27 15:25:09] 2025-11-27 20:24:33,802 | INFO     | . payload setup = 34 s
[2025-11-27 15:25:09] 2025-11-27 20:24:33,802 | INFO     | . stage-in = 0 s
[2025-11-27 15:25:09] 2025-11-27 20:24:33,802 | INFO     | . payload execution = 30143 s
[2025-11-27 15:25:09] 2025-11-27 20:24:33,802 | INFO     | . stage-out = 4 s
[2025-11-27 15:25:09] 2025-11-27 20:24:33,802 | INFO     | . log creation = 0 s
[2025-11-27 15:25:09] 2025-11-27 20:24:33,802 | INFO     | ..............................
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | 
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | job summary report
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | --------------------------------------------------
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | PanDA job id: 6898271553
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | task id: 47556161
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | errors: (none)
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | pilot state: finished 
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | transexitcode: 0
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | exeerrorcode: 0
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | exeerrordiag: 
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | exitcode: 0
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | exitmsg: OK
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | cpuconsumptiontime: 132623 s
[2025-11-27 15:25:09] 2025-11-27 20:24:33,886 | INFO     | nevents: 1000
[2025-11-27 15:25:09] 2025-11-27 20:24:33,887 | INFO     | neventsw: 0
[2025-11-27 15:25:09] 2025-11-27 20:24:33,887 | INFO     | pid: 3406656
[2025-11-27 15:25:09] 2025-11-27 20:24:33,887 | INFO     | pgrp: 3406656
[2025-11-27 15:25:09] 2025-11-27 20:24:33,887 | INFO     | corecount: 8
[2025-11-27 15:25:09] 2025-11-27 20:24:33,887 | INFO     | event service: False
[2025-11-27 15:25:09] 2025-11-27 20:24:33,887 | INFO     | sizes: {0: 2284315, 11: 2284315, 22: 2284343, 26: 2284633, 32: 2284661, 30181: 2322675, 30182: 2322802, 30187: 2331852, 30188: 2331908, 30223: 2332154}
[2025-11-27 15:25:09] 2025-11-27 20:24:33,887 | INFO     | --------------------------------------------------
[2025-11-27 15:25:09] 2025-11-27 20:24:33,887 | INFO     | 
[2025-11-27 15:25:09] 2025-11-27 20:24:33,887 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-27 15:25:09] 2025-11-27 20:24:33,917 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,917 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,917 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,917 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,917 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,917 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,917 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,918 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,918 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:25:09] 2025-11-27 20:24:33,918 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,918 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:25:09] 2025-11-27 20:24:33,918 | INFO     | job 6898271553 has completed (purged errors)
[2025-11-27 15:25:09] 2025-11-27 20:24:33,918 | INFO     | overall cleanup function is called
[2025-11-27 15:25:09] 2025-11-27 20:24:34,947 | INFO     | --- collectZombieJob: --- 10, [3406656]
[2025-11-27 15:25:09] 2025-11-27 20:24:34,947 | INFO     | zombie collector waiting for pid 3406656
[2025-11-27 15:25:09] 2025-11-27 20:24:34,947 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:25:09] 2025-11-27 20:24:34,947 | INFO     | collected zombie processes
[2025-11-27 15:25:09] 2025-11-27 20:24:34,947 | INFO     | will attempt to kill all subprocesses of pid=3406656
[2025-11-27 15:25:09] 2025-11-27 20:24:36,393 | INFO     | process IDs to be killed: [3406656] (in reverse order)
[2025-11-27 15:25:09] 2025-11-27 20:24:36,706 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:25:09] 2025-11-27 20:24:36,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:25:09] 2025-11-27 20:24:36,920 | INFO     | did not find any defunct processes belonging to 3406656
[2025-11-27 15:25:09] 2025-11-27 20:24:36,985 | INFO     | did not find any defunct processes belonging to 3406656
[2025-11-27 15:25:09] 2025-11-27 20:24:36,988 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:25:09] 2025-11-27 20:24:36,989 | INFO     | ready for new job
[2025-11-27 15:25:09] 2025-11-27 20:24:36,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:25:09] 2025-11-27 20:24:36,991 | INFO     | ***************************************
[2025-11-27 15:25:09] 2025-11-27 20:24:36,991 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:25:09] 2025-11-27 20:24:36,991 | INFO     | ***************************************
[2025-11-27 15:25:09] 2025-11-27 20:24:36,991 | INFO     | 
[2025-11-27 15:25:09] 2025-11-27 20:24:37,001 | INFO     | architecture information:
[2025-11-27 15:25:09] 2025-11-27 20:24:37,007 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:25:09] 2025-11-27 20:24:37,059 | INFO     | cat /etc/os-release:
[2025-11-27 15:25:09] NAME="CentOS Linux"
[2025-11-27 15:25:09] VERSION="7 (Core)"
[2025-11-27 15:25:09] ID="centos"
[2025-11-27 15:25:09] ID_LIKE="rhel fedora"
[2025-11-27 15:25:09] VERSION_ID="7"
[2025-11-27 15:25:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:25:09] ANSI_COLOR="0;31"
[2025-11-27 15:25:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:25:09] HOME_URL="https://www.centos.org/"
[2025-11-27 15:25:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:25:09] 
[2025-11-27 15:25:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:25:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:25:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:25:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:25:09] 
[2025-11-27 15:25:09] 2025-11-27 20:24:37,059 | INFO     | ***************************************
[2025-11-27 15:25:09] 2025-11-27 20:24:37,563 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-27 15:25:09] 2025-11-27 20:24:37,653 | INFO     | sufficient remaining disk space (81101062144 B)
[2025-11-27 15:25:09] 2025-11-27 20:24:37,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:25:09] 2025-11-27 20:24:37,654 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:25:09] 2025-11-27 20:24:37,654 | INFO     | update_server=False
[2025-11-27 15:25:09] 2025-11-27 20:24:37,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:25:09] 2025-11-27 20:24:37,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:25:09] 2025-11-27 20:24:37,654 | INFO     | aborting loop
[2025-11-27 15:25:09] 2025-11-27 20:24:38,073 | INFO     | all payload control threads have been joined
[2025-11-27 15:25:09] 2025-11-27 20:24:38,339 | INFO     | all job control threads have been joined
[2025-11-27 15:25:09] 2025-11-27 20:24:38,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:25:09] 2025-11-27 20:24:38,660 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:38,660 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:38,760 | INFO     | all data control threads have been joined
[2025-11-27 15:25:09] 2025-11-27 20:24:38,905 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:25:09] 2025-11-27 20:24:39,079 | INFO     | [payload] control thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:39,220 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:39,220 | INFO     | [job] validate thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:39,347 | INFO     | [job] control thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:39,595 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:39,675 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:39,766 | INFO     | [data] control thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:39,865 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:39,865 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:39,911 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:39,944 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:40,181 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:40,356 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:40,655 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:25:09] 2025-11-27 20:24:44,671 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:25:09] 2025-11-27 20:24:46,075 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:25:09] 2025-11-27 20:24:47,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128049657664)>', '<ExcThread(monitor, started 140127334561536)>']
[2025-11-27 15:25:09] 2025-11-27 20:24:52,966 | INFO     | all workflow threads have been joined
[2025-11-27 15:25:09] 2025-11-27 20:24:52,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:25:09] 2025-11-27 20:24:52,973 | INFO     | traces error code: 0
[2025-11-27 15:25:09] 2025-11-27 20:24:52,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:25:09] 2025-11-27 20:25:07,374 | INFO     | PID=3383377 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:25:09] 2025-11-27 20:25:07,374 | INFO     | .. there are 112 such processes running
[2025-11-27 15:25:09] 2025-11-27 20:25:07,374 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:25:09] 2025-11-27 20:25:07,374 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:25:09] 2025-11-27 20:25:07,374 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:25:09] 2025-11-27 20:25:07,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:25:09] 2025-11-27 20:25:07,374 | INFO     | [monitor] control thread has ended
[2025-11-27 15:25:09] 2025-11-27 20:25:07,709 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:25:09] 2025-11-27 20:25:07,719 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:25:09] 2025-11-27 20:25:07,736 [wrapper] pilotpid: 3383377
[2025-11-27 15:25:09] 2025-11-27 20:25:07,801 [wrapper] Pilot exit status: 0
[2025-11-27 15:25:09] 2025-11-27 20:25:08,013 [wrapper] pandaids: 6898271553
[2025-11-27 15:25:09] 2025-11-27 20:25:08,318 [wrapper] cleanup supervisor_pilot 3762858 3383378
[2025-11-27 15:25:09] 2025-11-27 20:25:08,322 [wrapper] Test setup, not cleaning
[2025-11-27 15:25:09] 2025-11-27 20:25:08,376 [wrapper] apfmon messages muted
[2025-11-27 15:25:09] 2025-11-27 20:25:08,394 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:25:09] 2025-11-27 20:25:08,396 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:25:09]  *** Error codes and diagnostics ***
[2025-11-27 15:25:09]     "exeErrorCode": 0,
[2025-11-27 15:25:09]     "exeErrorDiag": "",
[2025-11-27 15:25:09]     "pilotErrorCode": 0,
[2025-11-27 15:25:09]     "pilotErrorDiag": "",
[2025-11-27 15:25:09]  *** Listing of results directory ***
[2025-11-27 15:25:09] total 1298392
[2025-11-27 15:25:09] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 10:05 pilot3.tar.gz
[2025-11-27 15:25:09] -rwx------. 1 boincer umatlas     36292 Nov 26 10:17 runpilot2-wrapper.sh
[2025-11-27 15:25:09] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 10:17 queuedata.json
[2025-11-27 15:25:09] -rw-r--r--. 1 boincer umatlas       100 Nov 27 06:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:25:09] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 06:58 run_atlas
[2025-11-27 15:25:09] -rw-r--r--. 1 boincer umatlas       105 Nov 27 06:58 job.xml
[2025-11-27 15:25:09] -rw-r--r--. 2 boincer umatlas 408660226 Nov 27 06:58 EVNT.47483658._002539.pool.root.1
[2025-11-27 15:25:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 06:58 start_atlas.sh
[2025-11-27 15:25:09] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 06:58 shared
[2025-11-27 15:25:09] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 06:58 input.tar.gz
[2025-11-27 15:25:09] -rw-r--r--. 1 boincer umatlas         0 Nov 27 06:58 boinc_lockfile
[2025-11-27 15:25:09] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 06:58 pandaJob.out
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas        57 Nov 27 06:58 setup.sh.local
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas    991572 Nov 27 06:59 agis_schedconf.cvmfs.json
[2025-11-27 15:25:09] drwx------. 5 boincer umatlas      4096 Nov 27 06:59 pilot3
[2025-11-27 15:25:09] -rw-r--r--. 1 boincer umatlas       533 Nov 27 15:06 boinc_task_state.xml
[2025-11-27 15:25:09] -rw-r--r--. 1 boincer umatlas      7172 Nov 27 15:19 init_data.xml
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas 906191205 Nov 27 15:23 HITS.47556161._005218.pool.root.1
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas      1052 Nov 27 15:23 memory_monitor_summary.json
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas   1516240 Nov 27 15:23 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas   1728640 Nov 27 15:23 log.47556161._005218.job.log.tgz.1
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas        95 Nov 27 15:24 pilot_heartbeat.json
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas      8579 Nov 27 15:24 heartbeat.json
[2025-11-27 15:25:09] -rw-r--r--. 1 boincer umatlas        29 Nov 27 15:25 wrapper_checkpoint.txt
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas       824 Nov 27 15:25 pilotlog.txt
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas   3662759 Nov 27 15:25 log.47556161._005218.job.log.1
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas       353 Nov 27 15:25 output.list
[2025-11-27 15:25:09] -rw-r--r--. 1 boincer umatlas       620 Nov 27 15:25 runtime_log
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas   5406720 Nov 27 15:25 result.tar.gz
[2025-11-27 15:25:09] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 15:25 runtime_log.err
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas       658 Nov 27 15:25 GoUKDmASWi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzyJKDmaTK84m.diag
[2025-11-27 15:25:09] -rw-r--r--. 1 boincer umatlas     21804 Nov 27 15:25 stderr.txt
[2025-11-27 15:25:09] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 15:25 boinc_mmap_file
[2025-11-27 15:25:09] HITS file was successfully produced:
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas 906191205 Nov 27 15:23 shared/HITS.pool.root.1
[2025-11-27 15:25:09]  *** Contents of shared directory: ***
[2025-11-27 15:25:09] total 1289924
[2025-11-27 15:25:09] -rw-r--r--. 2 boincer umatlas 408660226 Nov 27 06:58 ATLAS.root_0
[2025-11-27 15:25:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 06:58 start_atlas.sh
[2025-11-27 15:25:09] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 06:58 input.tar.gz
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas 906191205 Nov 27 15:23 HITS.pool.root.1
[2025-11-27 15:25:09] -rw-------. 1 boincer umatlas   5406720 Nov 27 15:25 result.tar.gz
15:25:31 (3363342): run_atlas exited; CPU time 133380.778205
15:25:31 (3363342): called boinc_finish(0)

</stderr_txt>
]]>

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