Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:32:54 (2851514): wrapper (7.7.26015): starting
06:32:54 (2851514): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 06:32:54] Arguments: --nthreads 8
[2025-11-27 06:32:54] Threads: 8
[2025-11-27 06:32:54] Checking for CVMFS
[2025-11-27 06:32:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 06:32:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 06:32:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 06:32:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 06:32:57] 2.13.3.0 22787 31384 243312 153362 2 666 37975336 40960001 66803 16776704 0 456137163 99.749 277723517 47707 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 06:32:57] CVMFS is ok
[2025-11-27 06:32:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 06:32:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 06:32:57] Further information can be found at the LHC@home message board.
[2025-11-27 06:32:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 06:32:57] Checking for apptainer binary...
[2025-11-27 06:32:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 06:32:57] Running /usr/bin/apptainer --version
[2025-11-27 06:32:57] apptainer version 1.4.4-1.el9
[2025-11-27 06:32:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 06:32:58] c8-6-11.aglt2.org
[2025-11-27 06:32:58] apptainer works
[2025-11-27 06:32:58] Set ATHENA_PROC_NUMBER=8
[2025-11-27 06:32:58] Set ATHENA_CORE_NUMBER=8
[2025-11-27 06:32:59] Starting ATLAS job with PandaID=6898271442
[2025-11-27 06:32:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:33:02]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:33:02] 2025-11-27 22:32:19,165 | INFO     | monitor loop #2205: job 0:6898271442 is in state 'finished'
[2025-11-27 17:33:02] 2025-11-27 22:32:19,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:33:02] 2025-11-27 22:32:19,628 | INFO     | time since job start (39469s) is within the limit (172800.0s)
[2025-11-27 17:33:02] 2025-11-27 22:32:21,640 | INFO     | time since job start (39471s) is within the limit (172800.0s)
[2025-11-27 17:33:02] 2025-11-27 22:32:21,676 | INFO     | monitor loop #2206: job 0:6898271442 is in state 'finished'
[2025-11-27 17:33:02] 2025-11-27 22:32:21,676 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:33:02] 2025-11-27 22:32:23,649 | INFO     | time since job start (39473s) is within the limit (172800.0s)
[2025-11-27 17:33:02] 2025-11-27 22:32:24,188 | INFO     | monitor loop #2207: job 0:6898271442 is in state 'finished'
[2025-11-27 17:33:02] 2025-11-27 22:32:24,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:33:02] 2025-11-27 22:32:25,680 | INFO     | time since job start (39475s) is within the limit (172800.0s)
[2025-11-27 17:33:02] 2025-11-27 22:32:25,836 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 17:33:02] 2025-11-27 22:32:25,846 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.1193828125
[2025-11-27 17:33:02] 2025-11-27 22:32:25,891 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6898271442/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 17:33:02] 2025-11-27 22:32:25,894 | INFO     | extracted standard info from prmon json
[2025-11-27 17:33:02] 2025-11-27 22:32:25,894 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:33:02] 2025-11-27 22:32:25,894 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:33:02] 2025-11-27 22:32:25,913 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:33:02] 2025-11-27 22:32:25,913 | INFO     | sum of square deviations: 82817278173.09773
[2025-11-27 17:33:02] 2025-11-27 22:32:25,926 | INFO     | sum of deviations: 659434669340.4359
[2025-11-27 17:33:02] 2025-11-27 22:32:25,926 | INFO     | mean x: 1764263069.5543478
[2025-11-27 17:33:02] 2025-11-27 22:32:25,926 | INFO     | mean y: 2823546.5590062113
[2025-11-27 17:33:02] 2025-11-27 22:32:25,926 | INFO     | intersect: -14045165708.405867
[2025-11-27 17:33:02] 2025-11-27 22:32:25,926 | INFO     | chi2: 17.347778598788167
[2025-11-27 17:33:02] 2025-11-27 22:32:25,936 | INFO     | sum of square deviations: 80903384257.4959
[2025-11-27 17:33:02] 2025-11-27 22:32:25,955 | INFO     | sum of deviations: 885637821980.479
[2025-11-27 17:33:02] 2025-11-27 22:32:25,955 | INFO     | mean x: 1764262917.0625978
[2025-11-27 17:33:02] 2025-11-27 22:32:25,955 | INFO     | mean y: 2841570.3129890454
[2025-11-27 17:33:02] 2025-11-27 22:32:25,955 | INFO     | intersect: -19310293246.089657
[2025-11-27 17:33:02] 2025-11-27 22:32:25,956 | INFO     | chi2: 13.697355680689867
[2025-11-27 17:33:02] 2025-11-27 22:32:25,956 | INFO     | current chi2=13.697355680689867 (change=21.042595726655755 %)
[2025-11-27 17:33:02] 2025-11-27 22:32:25,956 | INFO     | right removable region: 638
[2025-11-27 17:33:02] 2025-11-27 22:32:25,960 | INFO     | sum of square deviations: 80902970067.49594
[2025-11-27 17:33:02] 2025-11-27 22:32:25,970 | INFO     | sum of deviations: 398675346953.75354
[2025-11-27 17:33:02] 2025-11-27 22:32:25,970 | INFO     | mean x: 1764263222.0625978
[2025-11-27 17:33:02] 2025-11-27 22:32:25,970 | INFO     | mean y: 2844315.93114241
[2025-11-27 17:33:02] 2025-11-27 22:32:25,970 | INFO     | intersect: -8691128866.84256
[2025-11-27 17:33:02] 2025-11-27 22:32:25,979 | INFO     | chi2: 12.857706105530106
[2025-11-27 17:33:02] 2025-11-27 22:32:25,979 | INFO     | current chi2=12.857706105530106 (change=25.882694246349885 %)
[2025-11-27 17:33:02] 2025-11-27 22:32:25,980 | INFO     | sum of square deviations: 79018383449.30603
[2025-11-27 17:33:02] 2025-11-27 22:32:25,993 | INFO     | sum of deviations: 175147988564.63098
[2025-11-27 17:33:02] 2025-11-27 22:32:25,993 | INFO     | mean x: 1764263374.570978
[2025-11-27 17:33:02] 2025-11-27 22:32:25,993 | INFO     | mean y: 2862405.2082018927
[2025-11-27 17:33:02] 2025-11-27 22:32:25,993 | INFO     | intersect: -3907710905.274635
[2025-11-27 17:33:02] 2025-11-27 22:32:25,994 | INFO     | chi2: 9.718005581758662
[2025-11-27 17:33:02] 2025-11-27 22:32:25,994 | INFO     | current chi2=9.718005581758662 (change=24.418823217782652 %)
[2025-11-27 17:33:02] 2025-11-27 22:32:25,994 | INFO     | left removable region: 20
[2025-11-27 17:33:02] 2025-11-27 22:32:25,994 | INFO     | sum of square deviations: 73185566060.12465
[2025-11-27 17:33:02] 2025-11-27 22:32:26,011 | INFO     | sum of deviations: 319892372425.0553
[2025-11-27 17:33:02] 2025-11-27 22:32:26,011 | INFO     | mean x: 1764263496.5841424
[2025-11-27 17:33:02] 2025-11-27 22:32:26,011 | INFO     | mean y: 2894637.556634304
[2025-11-27 17:33:02] 2025-11-27 22:32:26,011 | INFO     | intersect: -7708659236.89957
[2025-11-27 17:33:02] 2025-11-27 22:32:26,012 | INFO     | chi2: 4.744820966166547
[2025-11-27 17:33:02] 2025-11-27 22:32:26,012 | INFO     | current memory leak: 4.37 B/s (using 618 data points, chi2=4.74)
[2025-11-27 17:33:02] 2025-11-27 22:32:26,013 | INFO     | could have reported an average CPU frequency of 3796 MHz (25 samples)
[2025-11-27 17:33:02] 2025-11-27 22:32:26,013 | INFO     | ..............................
[2025-11-27 17:33:02] 2025-11-27 22:32:26,013 | INFO     | . Timing measurements:
[2025-11-27 17:33:02] 2025-11-27 22:32:26,013 | INFO     | . get job = 0 s
[2025-11-27 17:33:02] 2025-11-27 22:32:26,013 | INFO     | . initial setup = 4 s
[2025-11-27 17:33:02] 2025-11-27 22:32:26,013 | INFO     | . payload setup = 51 s
[2025-11-27 17:33:02] 2025-11-27 22:32:26,013 | INFO     | . stage-in = 0 s
[2025-11-27 17:33:02] 2025-11-27 22:32:26,013 | INFO     | . payload execution = 39295 s
[2025-11-27 17:33:02] 2025-11-27 22:32:26,013 | INFO     | . stage-out = 7 s
[2025-11-27 17:33:02] 2025-11-27 22:32:26,013 | INFO     | . log creation = 1 s
[2025-11-27 17:33:02] 2025-11-27 22:32:26,013 | INFO     | ..............................
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | 
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | job summary report
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | --------------------------------------------------
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | PanDA job id: 6898271442
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | task id: 47556161
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | errors: (none)
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | pilot state: finished 
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | transexitcode: 0
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | exeerrorcode: 0
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | exeerrordiag: 
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | exitcode: 0
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | exitmsg: OK
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | cpuconsumptiontime: 135937 s
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | nevents: 1000
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | neventsw: 0
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | pid: 2875807
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | pgrp: 2875807
[2025-11-27 17:33:02] 2025-11-27 22:32:26,188 | INFO     | corecount: 8
[2025-11-27 17:33:02] 2025-11-27 22:32:26,189 | INFO     | event service: False
[2025-11-27 17:33:02] 2025-11-27 22:32:26,189 | INFO     | sizes: {0: 2283487, 1: 2284172, 2: 2284343, 12: 2284371, 23: 2284399, 34: 2284427, 39: 2284845, 44: 2284873, 39350: 2327431, 39357: 2336425, 39358: 2336481, 39391:
[2025-11-27 17:33:02] 2025-11-27 22:32:26,189 | INFO     | --------------------------------------------------
[2025-11-27 17:33:02] 2025-11-27 22:32:26,189 | INFO     | 
[2025-11-27 17:33:02] 2025-11-27 22:32:26,189 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 17:33:02] 2025-11-27 22:32:26,270 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,270 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,270 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,270 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,270 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,270 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,271 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,271 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,271 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,271 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,271 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,271 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,271 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:33:02] 2025-11-27 22:32:26,271 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,271 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:33:02] 2025-11-27 22:32:26,271 | INFO     | job 6898271442 has completed (purged errors)
[2025-11-27 17:33:02] 2025-11-27 22:32:26,271 | INFO     | overall cleanup function is called
[2025-11-27 17:33:02] 2025-11-27 22:32:27,305 | INFO     | --- collectZombieJob: --- 10, [2875807]
[2025-11-27 17:33:02] 2025-11-27 22:32:27,306 | INFO     | zombie collector waiting for pid 2875807
[2025-11-27 17:33:02] 2025-11-27 22:32:27,307 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:33:02] 2025-11-27 22:32:27,307 | INFO     | collected zombie processes
[2025-11-27 17:33:02] 2025-11-27 22:32:27,307 | INFO     | will attempt to kill all subprocesses of pid=2875807
[2025-11-27 17:33:02] 2025-11-27 22:32:29,001 | INFO     | process IDs to be killed: [2875807] (in reverse order)
[2025-11-27 17:33:02] 2025-11-27 22:32:29,831 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:33:02] 2025-11-27 22:32:29,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:33:02] 2025-11-27 22:32:29,997 | INFO     | did not find any defunct processes belonging to 2875807
[2025-11-27 17:33:02] 2025-11-27 22:32:30,098 | INFO     | did not find any defunct processes belonging to 2875807
[2025-11-27 17:33:02] 2025-11-27 22:32:30,126 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:33:02] 2025-11-27 22:32:30,126 | INFO     | ready for new job
[2025-11-27 17:33:02] 2025-11-27 22:32:30,126 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:33:02] 2025-11-27 22:32:30,129 | INFO     | ***************************************
[2025-11-27 17:33:02] 2025-11-27 22:32:30,129 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:33:02] 2025-11-27 22:32:30,129 | INFO     | ***************************************
[2025-11-27 17:33:02] 2025-11-27 22:32:30,129 | INFO     | 
[2025-11-27 17:33:02] 2025-11-27 22:32:30,179 | INFO     | architecture information:
[2025-11-27 17:33:02] 2025-11-27 22:32:30,183 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:33:02] 2025-11-27 22:32:30,236 | INFO     | cat /etc/os-release:
[2025-11-27 17:33:02] NAME="CentOS Linux"
[2025-11-27 17:33:02] VERSION="7 (Core)"
[2025-11-27 17:33:02] ID="centos"
[2025-11-27 17:33:02] ID_LIKE="rhel fedora"
[2025-11-27 17:33:02] VERSION_ID="7"
[2025-11-27 17:33:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:33:02] ANSI_COLOR="0;31"
[2025-11-27 17:33:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:33:02] HOME_URL="https://www.centos.org/"
[2025-11-27 17:33:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:33:02] 
[2025-11-27 17:33:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:33:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:33:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:33:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:33:02] 
[2025-11-27 17:33:02] 2025-11-27 22:32:30,236 | INFO     | ***************************************
[2025-11-27 17:33:02] 2025-11-27 22:32:30,741 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 17:33:02] 2025-11-27 22:32:30,802 | INFO     | sufficient remaining disk space (162014429184 B)
[2025-11-27 17:33:02] 2025-11-27 22:32:30,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:33:02] 2025-11-27 22:32:30,802 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:33:02] 2025-11-27 22:32:30,802 | INFO     | update_server=False
[2025-11-27 17:33:02] 2025-11-27 22:32:30,803 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:33:02] 2025-11-27 22:32:30,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:33:02] 2025-11-27 22:32:30,803 | INFO     | aborting loop
[2025-11-27 17:33:02] 2025-11-27 22:32:30,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:33:02] 2025-11-27 22:32:30,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:33:02] 2025-11-27 22:32:31,213 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:33:02] 2025-11-27 22:32:31,292 | INFO     | all data control threads have been joined
[2025-11-27 17:33:02] 2025-11-27 22:32:31,730 | INFO     | all job control threads have been joined
[2025-11-27 17:33:02] 2025-11-27 22:32:31,814 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:31,814 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:31,855 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:31,855 | INFO     | all payload control threads have been joined
[2025-11-27 17:33:02] 2025-11-27 22:32:32,055 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:32,219 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:32,298 | INFO     | [data] control thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:32,386 | INFO     | [job] validate thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:32,438 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:32,736 | INFO     | [job] control thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:32,820 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:32,861 | INFO     | [payload] control thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:32,875 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:32,969 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:33,056 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:33,125 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:34,822 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:33:02] 2025-11-27 22:32:39,327 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:33:02] 2025-11-27 22:32:40,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140129116079936)>', '<ExcThread(monitor, started 140128399910656)>']
[2025-11-27 17:33:02] 2025-11-27 22:32:45,726 | INFO     | all workflow threads have been joined
[2025-11-27 17:33:02] 2025-11-27 22:32:45,726 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:33:02] 2025-11-27 22:32:45,726 | INFO     | traces error code: 0
[2025-11-27 17:33:02] 2025-11-27 22:32:45,726 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:33:02] 2025-11-27 22:33:00,450 | INFO     | PID=2862815 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 17:33:02] 2025-11-27 22:33:00,474 | INFO     | .. there are 86 such processes running
[2025-11-27 17:33:02] 2025-11-27 22:33:00,474 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:33:02] 2025-11-27 22:33:00,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:33:02] 2025-11-27 22:33:00,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:33:02] 2025-11-27 22:33:00,475 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:33:02] 2025-11-27 22:33:00,475 | INFO     | [monitor] control thread has ended
[2025-11-27 17:33:02] 2025-11-27 22:33:01,487 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:33:02] 2025-11-27 22:33:01,520 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:33:02] 2025-11-27 22:33:01,544 [wrapper] pilotpid: 2862815
[2025-11-27 17:33:02] 2025-11-27 22:33:01,562 [wrapper] Pilot exit status: 0
[2025-11-27 17:33:02] 2025-11-27 22:33:01,656 [wrapper] pandaids: 6898271442
[2025-11-27 17:33:02] 2025-11-27 22:33:01,907 [wrapper] cleanup supervisor_pilot 3574176 2862816
[2025-11-27 17:33:02] 2025-11-27 22:33:01,969 [wrapper] Test setup, not cleaning
[2025-11-27 17:33:02] 2025-11-27 22:33:01,990 [wrapper] apfmon messages muted
[2025-11-27 17:33:02] 2025-11-27 22:33:02,033 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:33:02] 2025-11-27 22:33:02,086 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:33:02]  *** Error codes and diagnostics ***
[2025-11-27 17:33:02]     "exeErrorCode": 0,
[2025-11-27 17:33:02]     "exeErrorDiag": "",
[2025-11-27 17:33:02]     "pilotErrorCode": 0,
[2025-11-27 17:33:02]     "pilotErrorDiag": "",
[2025-11-27 17:33:02]  *** Listing of results directory ***
[2025-11-27 17:33:02] total 1322712
[2025-11-27 17:33:02] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 10:05 pilot3.tar.gz
[2025-11-27 17:33:02] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 10:08 queuedata.json
[2025-11-27 17:33:02] -rwx------. 1 boincer umatlas     36292 Nov 26 10:08 runpilot2-wrapper.sh
[2025-11-27 17:33:02] -rw-r--r--. 1 boincer umatlas       100 Nov 27 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:33:02] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 06:32 run_atlas
[2025-11-27 17:33:02] -rw-r--r--. 1 boincer umatlas       105 Nov 27 06:32 job.xml
[2025-11-27 17:33:02] -rw-r--r--. 2 boincer umatlas 412267112 Nov 27 06:32 EVNT.47483658._002535.pool.root.1
[2025-11-27 17:33:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 06:32 start_atlas.sh
[2025-11-27 17:33:02] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 06:32 shared
[2025-11-27 17:33:02] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 06:32 input.tar.gz
[2025-11-27 17:33:02] -rw-r--r--. 1 boincer umatlas         0 Nov 27 06:32 boinc_lockfile
[2025-11-27 17:33:02] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 06:32 pandaJob.out
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas        57 Nov 27 06:33 setup.sh.local
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas    991572 Nov 27 06:34 agis_schedconf.cvmfs.json
[2025-11-27 17:33:02] drwx------. 5 boincer umatlas      4096 Nov 27 06:34 pilot3
[2025-11-27 17:33:02] -rw-r--r--. 1 boincer umatlas       533 Nov 27 17:15 boinc_task_state.xml
[2025-11-27 17:33:02] -rw-r--r--. 1 boincer umatlas      7174 Nov 27 17:29 init_data.xml
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas 925055006 Nov 27 17:30 HITS.47556161._005180.pool.root.1
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas      1052 Nov 27 17:31 memory_monitor_summary.json
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas   1516240 Nov 27 17:31 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas   1847864 Nov 27 17:31 log.47556161._005180.job.log.tgz.1
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas      8583 Nov 27 17:32 heartbeat.json
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas        95 Nov 27 17:32 pilot_heartbeat.json
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas       823 Nov 27 17:33 pilotlog.txt
[2025-11-27 17:33:02] -rw-r--r--. 1 boincer umatlas        29 Nov 27 17:33 wrapper_checkpoint.txt
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas   4756737 Nov 27 17:33 log.47556161._005180.job.log.1
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas       353 Nov 27 17:33 output.list
[2025-11-27 17:33:02] -rw-r--r--. 1 boincer umatlas       620 Nov 27 17:33 runtime_log
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas   6625280 Nov 27 17:33 result.tar.gz
[2025-11-27 17:33:02] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 17:33 runtime_log.err
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas       659 Nov 27 17:33 agfMDmAJWi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmS3MKDmPs2ZCo.diag
[2025-11-27 17:33:02] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 17:33 boinc_mmap_file
[2025-11-27 17:33:02] -rw-r--r--. 1 boincer umatlas     21595 Nov 27 17:33 stderr.txt
[2025-11-27 17:33:02] HITS file was successfully produced:
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas 925055006 Nov 27 17:30 shared/HITS.pool.root.1
[2025-11-27 17:33:02]  *** Contents of shared directory: ***
[2025-11-27 17:33:02] total 1313060
[2025-11-27 17:33:02] -rw-r--r--. 2 boincer umatlas 412267112 Nov 27 06:32 ATLAS.root_0
[2025-11-27 17:33:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 06:32 start_atlas.sh
[2025-11-27 17:33:02] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 06:32 input.tar.gz
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas 925055006 Nov 27 17:30 HITS.pool.root.1
[2025-11-27 17:33:02] -rw-------. 1 boincer umatlas   6625280 Nov 27 17:33 result.tar.gz
17:33:24 (2851514): run_atlas exited; CPU time 136740.514831
17:33:24 (2851514): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN