Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-27 09:56:22 (1773505): vboxwrapper version 26210
2025-11-27 09:56:22 (1773505): BOINC client version: 7.24.1
2025-11-27 09:56:22 (1773505): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-11-27 09:56:22 (1773505): Successfully copied 'init_data.xml' to the shared directory.
2025-11-27 09:56:22 (1773505): Create VM. (boinc_5cdf444a5cee9a76, slot#0)
2025-11-27 09:56:22 (1773505): Setting Memory Size for VM. (4800MB)
2025-11-27 09:56:22 (1773505): Setting CPU Count for VM. (8)
2025-11-27 09:56:22 (1773505): Setting Chipset Options for VM.
2025-11-27 09:56:22 (1773505): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-27 09:56:22 (1773505): Setting Boot Options for VM.
2025-11-27 09:56:22 (1773505): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-27 09:56:22 (1773505): Enabling VM Network Access.
2025-11-27 09:56:22 (1773505): Disabling USB Support for VM.
2025-11-27 09:56:23 (1773505): Disabling COM Port Support for VM.
2025-11-27 09:56:23 (1773505): Disabling LPT Port Support for VM.
2025-11-27 09:56:23 (1773505): Disabling Audio Support for VM.
2025-11-27 09:56:23 (1773505): Disabling Clipboard Support for VM.
2025-11-27 09:56:23 (1773505): Disabling Drag and Drop Support for VM.
2025-11-27 09:56:23 (1773505): Adding storage controller(s) to VM.
2025-11-27 09:56:23 (1773505): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-27 09:56:23 (1773505): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-27 09:56:23 (1773505): forwarding host port 46647 to guest port 80
2025-11-27 09:56:23 (1773505): Enabling remote desktop for VM.
2025-11-27 09:56:23 (1773505): Required extension pack not installed, remote desktop not enabled.
2025-11-27 09:56:23 (1773505): Enabling shared directory for VM.
2025-11-27 09:56:23 (1773505): Starting VM using VBoxManage interface. (boinc_5cdf444a5cee9a76, slot#0)
2025-11-27 09:56:25 (1773505): Successfully started VM. (PID = '1773971')
2025-11-27 09:56:25 (1773505): Reporting VM Process ID to BOINC.
2025-11-27 09:56:25 (1773505): Guest Log: BIOS: VirtualBox 7.0.16
2025-11-27 09:56:25 (1773505): Guest Log: CPUID EDX: 0x178bfbff
2025-11-27 09:56:25 (1773505): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-27 09:56:25 (1773505): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-27 09:56:25 (1773505): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-27 09:56:25 (1773505): Detected: Web Application Enabled (http://localhost:46647)
2025-11-27 09:56:25 (1773505): Preference change detected
2025-11-27 09:56:25 (1773505): Setting CPU throttle for VM. (80%)
2025-11-27 09:56:25 (1773505): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-27 09:56:27 (1773505): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-27 09:56:27 (1773505): Guest Log: BIOS: Booting from Hard Disk...
2025-11-27 09:56:30 (1773505): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-27 09:56:30 (1773505): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-27 09:56:30 (1773505): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-27 09:56:38 (1773505): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-27 09:56:38 (1773505): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-27 09:56:41 (1773505): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-27 09:56:41 (1773505): Guest Log: 00:00:00.000084 main     Log opened 2025-11-27T15:56:40.138285000Z
2025-11-27 09:56:41 (1773505): Guest Log: 00:00:00.000141 main     OS Product: Linux
2025-11-27 09:56:41 (1773505): Guest Log: 00:00:00.000167 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-27 09:56:41 (1773505): Guest Log: 00:00:00.000178 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-27 09:56:41 (1773505): Guest Log: 00:00:00.000187 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-27 09:56:41 (1773505): Guest Log: 00:00:00.000188 main     Process ID: 1366
2025-11-27 09:56:41 (1773505): Guest Log: 00:00:00.000188 main     Package type: LINUX_64BITS_GENERIC
2025-11-27 09:56:41 (1773505): Guest Log: 00:00:00.000758 main     5.2.32 r132073 started. Verbose level = 0
2025-11-27 09:56:41 (1773505): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-27 09:56:41 (1773505): Guest Log: [INFO] Mounting shared directory
2025-11-27 09:56:41 (1773505): Guest Log: [INFO] Checking for init_data.xml
2025-11-27 09:56:43 (1773505): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-27 09:56:43 (1773505): Guest Log: [INFO] Detected branch: prod
2025-11-27 09:56:43 (1773505): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-27 09:56:43 (1773505): Guest Log: Copying input files
2025-11-27 09:56:44 (1773505): Guest Log: Copied input files into RunAtlas.
2025-11-27 09:56:44 (1773505): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-27 09:56:44 (1773505): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-27 09:56:44 (1773505): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-27 09:56:44 (1773505): Guest Log: Further information can be found at the LHC@home message board.
2025-11-27 09:56:52 (1773505): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-27 09:56:52 (1773505): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-27 09:56:52 (1773505): Guest Log: 2.6.3.0 1644 0 30156 153372 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-27 09:56:53 (1773505): Guest Log: copied the webapp to /var/www
2025-11-27 09:56:53 (1773505): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-27 09:56:53 (1773505): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-27 09:56:53 (1773505): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-27 09:56:53 (1773505): Guest Log:  *** Starting ATLAS job. (PandaID=6897998756 taskID=47556161) ***
2025-11-27 10:26:46 (1773505): VM state change detected. (old = 'running', new = 'paused')
2025-11-27 10:27:06 (1773505): VM state change detected. (old = 'paused', new = 'running')
2025-11-27 11:35:46 (1773505): Status Report: Elapsed Time: '6000.000000'
2025-11-27 11:35:46 (1773505): Status Report: CPU Time: '29508.480000'
2025-11-27 13:14:47 (1773505): Status Report: Elapsed Time: '12000.000000'
2025-11-27 13:14:47 (1773505): Status Report: CPU Time: '66506.100000'
2025-11-27 14:53:49 (1773505): Status Report: Elapsed Time: '18000.000000'
2025-11-27 14:53:49 (1773505): Status Report: CPU Time: '103525.800000'
2025-11-27 16:09:55 (1773505): Guest Log:  *** Job finished ***
2025-11-27 16:09:55 (1773505): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:16,677 | INFO     | all workflow threads have been joined
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:16,677 | INFO     | end of generic workflow (traces error code: 0)
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:16,677 | INFO     | traces error code: 0
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:16,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,743 | INFO     | PID=6076 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,743 | INFO     | found 0 job(s) in 20 queues
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,744 | INFO     | [monitor] control thread has ended
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,805 [wrapper] ==== pilot stdout END ====
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,807 [wrapper] ==== wrapper stdout RESUME ====
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,811 [wrapper] pilotpid: 6076
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,813 [wrapper] Pilot exit status: 0
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,822 [wrapper] pandaids: 6897998756
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,839 [wrapper] cleanup supervisor_pilot 30756 6077
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,842 [wrapper] Test setup, not cleaning
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,848 [wrapper] apfmon messages muted
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,850 [wrapper] ==== wrapper stdout END ====
2025-11-27 16:09:55 (1773505): Guest Log: 2025-11-27 22:18:28,853 [wrapper] ==== wrapper stderr END ====
2025-11-27 16:09:55 (1773505): Guest Log:  *** Error codes and diagnostics ***
2025-11-27 16:09:55 (1773505): Guest Log:     "exeErrorCode": 0,
2025-11-27 16:09:55 (1773505): Guest Log:     "exeErrorDiag": "",
2025-11-27 16:09:55 (1773505): Guest Log:     "pilotErrorCode": 0,
2025-11-27 16:09:55 (1773505): Guest Log:     "pilotErrorDiag": "",
2025-11-27 16:09:55 (1773505): Guest Log:  *** Listing of results directory ***
2025-11-27 16:09:55 (1773505): Guest Log: total 922384
2025-11-27 16:09:55 (1773505): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 26 01:44 pilot3.tar.gz
2025-11-27 16:09:55 (1773505): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 26 02:26 queuedata.json
2025-11-27 16:09:55 (1773505): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 26 02:29 runpilot2-wrapper.sh
2025-11-27 16:09:55 (1773505): Guest Log: -rw-r--r--. 1 atlas atlas    590108 Nov 27 15:56 input.tar.gz
2025-11-27 16:09:55 (1773505): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 27 15:56 start_atlas.sh
2025-11-27 16:09:55 (1773505): Guest Log: -rw-r--r--. 1 atlas atlas      9578 Nov 27 15:56 init_data.xml
2025-11-27 16:09:55 (1773505): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 27 15:56 EVNT.47483658._002378.pool.root.1 -> /data/./ATLAS.root_0
2025-11-27 16:09:55 (1773505): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 27 15:56 pandaJob.out
2025-11-27 16:09:55 (1773505): Guest Log: -rw-------. 1 atlas atlas    991572 Nov 27 15:59 agis_schedconf.cvmfs.json
2025-11-27 16:09:55 (1773505): Guest Log: drwx------. 5 atlas atlas      4096 Nov 27 16:00 pilot3
2025-11-27 16:09:55 (1773505): Guest Log: -rw-------. 1 atlas atlas 931335976 Nov 27 22:17 HITS.47556161._003610.pool.root.1
2025-11-27 16:09:55 (1773505): Guest Log: -rw-------. 1 atlas atlas        95 Nov 27 22:17 pilot_heartbeat.json
2025-11-27 16:09:55 (1773505): Guest Log: -rw-------. 1 atlas atlas      1037 Nov 27 22:17 memory_monitor_summary.json
2025-11-27 16:09:55 (1773505): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 27 22:17 agis_ddmendpoints.agis.ALL.json
2025-11-27 16:09:55 (1773505): Guest Log: -rw-------. 1 atlas atlas   1676303 Nov 27 22:17 log.47556161._003610.job.log.tgz.1
2025-11-27 16:09:55 (1773505): Guest Log: -rw-------. 1 atlas atlas      8635 Nov 27 22:17 heartbeat.json
2025-11-27 16:09:55 (1773505): Guest Log: -rw-------. 1 atlas atlas       744 Nov 27 22:18 pilotlog.txt
2025-11-27 16:09:55 (1773505): Guest Log: -rw-------. 1 atlas atlas   2996113 Nov 27 22:18 log.47556161._003610.job.log.1
2025-11-27 16:09:55 (1773505): Guest Log: -rw-------. 1 atlas atlas       353 Nov 27 22:18 output.list
2025-11-27 16:09:55 (1773505): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 27 22:18 runtime_log
2025-11-27 16:09:55 (1773505): Guest Log: -rw-------. 1 atlas atlas   4689920 Nov 27 22:18 result.tar.gz
2025-11-27 16:09:55 (1773505): Guest Log: -rw-------. 1 atlas atlas       675 Nov 27 22:18 v4WMDm4SKi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmujMKDmOQVrln.diag
2025-11-27 16:09:55 (1773505): Guest Log: -rw-r--r--. 1 atlas atlas      8792 Nov 27 22:18 runtime_log.err
2025-11-27 16:09:55 (1773505): Guest Log: Looking for outputfile HITS.47556161._003610.pool.root.1
2025-11-27 16:09:55 (1773505): Guest Log: HITS file was successfully produced
2025-11-27 16:09:55 (1773505): Guest Log: -rw-------. 1 atlas atlas 931335976 Nov 27 22:17 /home/atlas/RunAtlas/HITS.47556161._003610.pool.root.1
2025-11-27 16:09:55 (1773505): Guest Log: Successfully finished the ATLAS job!
2025-11-27 16:09:55 (1773505): Guest Log: Copying the results back to the shared directory!
2025-11-27 16:09:56 (1773505): Guest Log:  *** Contents of shared directory: ***
2025-11-27 16:09:56 (1773505): Guest Log: total 406176
2025-11-27 16:09:56 (1773505): Guest Log: -rw-r--r--. 1 root root 410607258 Nov 27 15:56 ATLAS.root_0
2025-11-27 16:09:56 (1773505): Guest Log: -rw-r--r--. 1 root root      9578 Nov 27 15:56 init_data.xml
2025-11-27 16:09:56 (1773505): Guest Log: -rw-r--r--. 1 root root    590108 Nov 27 15:56 input.tar.gz
2025-11-27 16:09:56 (1773505): Guest Log: -rw-r--r--. 1 root root   4689920 Nov 27 22:09 result.tar.gz
2025-11-27 16:09:56 (1773505): Guest Log: -rw-r--r--. 1 root root     15847 Nov 27 15:56 start_atlas.sh
2025-11-27 16:09:56 (1773505): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-27 16:09:56 (1773505): VM Completion File Detected.
2025-11-27 16:09:56 (1773505): Powering off VM.
2025-11-27 16:09:56 (1773505): Successfully stopped VM.
2025-11-27 16:09:56 (1773505): Deregistering VM. (boinc_5cdf444a5cee9a76, slot#0)
2025-11-27 16:09:56 (1773505): Removing network bandwidth throttle group from VM.
2025-11-27 16:09:56 (1773505): Removing VM from VirtualBox.
2025-11-27 16:10:02 (1773505): called boinc_finish(0)

</stderr_txt>
]]>

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