Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
10:14:53 (451578): wrapper (7.7.26015): starting
10:14:53 (451578): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 10:14:53] Arguments: --nthreads 8
[2025-11-27 10:14:53] Threads: 8
[2025-11-27 10:14:53] Checking for CVMFS
[2025-11-27 10:14:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 10:14:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 10:14:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 10:14:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 10:14:53] 2.11.3.0 1658007 5912 86592 153376 0 81 3444838 4096001 2841 130560 0 9733847 99.924 690313 719 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 10:14:53] CVMFS is ok
[2025-11-27 10:14:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 10:14:53] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 10:14:53] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 10:14:53] Further information can be found at the LHC@home message board.
[2025-11-27 10:14:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 10:14:53] Checking for apptainer binary...
[2025-11-27 10:14:53] apptainer is not installed, using version from CVMFS
[2025-11-27 10:14:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 10:14:53] officedc-System-Product-Name
[2025-11-27 10:14:53] apptainer works
[2025-11-27 10:14:53] Set ATHENA_PROC_NUMBER=8
[2025-11-27 10:14:53] Set ATHENA_CORE_NUMBER=8
[2025-11-27 10:14:53] Starting ATLAS job with PandaID=6898271473
[2025-11-27 10:14:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:48:41]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:48:41] 2025-11-27 22:48:00,723 | INFO     | monitor loop #1479: job 0:6898271473 is in state 'finished'
[2025-11-27 15:48:41] 2025-11-27 22:48:00,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:48:41] 2025-11-27 22:48:00,955 | INFO     | time since job start (19977s) is within the limit (172800.0s)
[2025-11-27 15:48:41] 2025-11-27 22:48:01,286 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 15:48:41] 2025-11-27 22:48:01,290 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3831.1826249999995
[2025-11-27 15:48:41] 2025-11-27 22:48:01,295 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6898271473/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:48:41] 2025-11-27 22:48:01,295 | INFO     | extracted standard info from prmon json
[2025-11-27 15:48:41] 2025-11-27 22:48:01,295 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:48:41] 2025-11-27 22:48:01,295 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:48:41] 2025-11-27 22:48:01,299 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:48:41] 2025-11-27 22:48:01,300 | INFO     | sum of square deviations: 10842110055.400612
[2025-11-27 15:48:41] 2025-11-27 22:48:01,302 | INFO     | sum of deviations: 146272248620.945
[2025-11-27 15:48:41] 2025-11-27 22:48:01,302 | INFO     | mean x: 1764273667.29052
[2025-11-27 15:48:41] 2025-11-27 22:48:01,302 | INFO     | mean y: 2859829.853211009
[2025-11-27 15:48:41] 2025-11-27 22:48:01,302 | INFO     | intersect: -23799174569.231293
[2025-11-27 15:48:41] 2025-11-27 22:48:01,302 | INFO     | chi2: 4.238990255964533
[2025-11-27 15:48:41] 2025-11-27 22:48:01,303 | INFO     | sum of square deviations: 10352353102.472044
[2025-11-27 15:48:41] 2025-11-27 22:48:01,304 | INFO     | sum of deviations: 221909427239.4659
[2025-11-27 15:48:41] 2025-11-27 22:48:01,304 | INFO     | mean x: 1764273514.795031
[2025-11-27 15:48:41] 2025-11-27 22:48:01,304 | INFO     | mean y: 2883285.416149068
[2025-11-27 15:48:41] 2025-11-27 22:48:01,305 | INFO     | intersect: -37815467893.93419
[2025-11-27 15:48:41] 2025-11-27 22:48:01,305 | INFO     | chi2: 2.1717876234130875
[2025-11-27 15:48:41] 2025-11-27 22:48:01,305 | INFO     | current chi2=2.1717876234130875 (change=48.76639264840862 %)
[2025-11-27 15:48:41] 2025-11-27 22:48:01,305 | INFO     | sum of square deviations: 9877553776.126167
[2025-11-27 15:48:41] 2025-11-27 22:48:01,307 | INFO     | sum of deviations: 215344192473.66238
[2025-11-27 15:48:41] 2025-11-27 22:48:01,307 | INFO     | mean x: 1764273362.29653
[2025-11-27 15:48:41] 2025-11-27 22:48:01,307 | INFO     | mean y: 2881177.0567823346
[2025-11-27 15:48:41] 2025-11-27 22:48:01,307 | INFO     | intersect: -38460693015.25107
[2025-11-27 15:48:41] 2025-11-27 22:48:01,308 | INFO     | chi2: 2.171593194732883
[2025-11-27 15:48:41] 2025-11-27 22:48:01,308 | INFO     | current chi2=2.171593194732883 (change=0.008952472060741323 %)
[2025-11-27 15:48:41] 2025-11-27 22:48:01,308 | INFO     | right removable region: 316
[2025-11-27 15:48:41] 2025-11-27 22:48:01,308 | INFO     | sum of square deviations: 10352314855.05897
[2025-11-27 15:48:41] 2025-11-27 22:48:01,310 | INFO     | sum of deviations: 61807957639.33224
[2025-11-27 15:48:41] 2025-11-27 22:48:01,310 | INFO     | mean x: 1764273819.7919254
[2025-11-27 15:48:41] 2025-11-27 22:48:01,310 | INFO     | mean y: 2886022.5124223605
[2025-11-27 15:48:41] 2025-11-27 22:48:01,310 | INFO     | intersect: -10530619096.354158
[2025-11-27 15:48:41] 2025-11-27 22:48:01,311 | INFO     | chi2: 2.142089320057488
[2025-11-27 15:48:41] 2025-11-27 22:48:01,311 | INFO     | current chi2=2.142089320057488 (change=49.466991176886296 %)
[2025-11-27 15:48:41] 2025-11-27 22:48:01,311 | INFO     | sum of square deviations: 9877536450.877024
[2025-11-27 15:48:41] 2025-11-27 22:48:01,313 | INFO     | sum of deviations: 50645645372.91168
[2025-11-27 15:48:41] 2025-11-27 22:48:01,313 | INFO     | mean x: 1764273972.2870662
[2025-11-27 15:48:41] 2025-11-27 22:48:01,313 | INFO     | mean y: 2889600.539432177
[2025-11-27 15:48:41] 2025-11-27 22:48:01,313 | INFO     | intersect: -9043171063.015533
[2025-11-27 15:48:41] 2025-11-27 22:48:01,314 | INFO     | chi2: 2.1287656132747963
[2025-11-27 15:48:41] 2025-11-27 22:48:01,314 | INFO     | current chi2=2.1287656132747963 (change=0.6219958550717253 %)
[2025-11-27 15:48:41] 2025-11-27 22:48:01,314 | INFO     | left removable region: 20
[2025-11-27 15:48:41] 2025-11-27 22:48:01,314 | INFO     | sum of square deviations: 8041776337.283797
[2025-11-27 15:48:41] 2025-11-27 22:48:01,316 | INFO     | sum of deviations: 106528790279.27696
[2025-11-27 15:48:41] 2025-11-27 22:48:01,316 | INFO     | mean x: 1764273941.7770271
[2025-11-27 15:48:41] 2025-11-27 22:48:01,316 | INFO     | mean y: 2917008.746621622
[2025-11-27 15:48:41] 2025-11-27 22:48:01,316 | INFO     | intersect: -23368283688.217693
[2025-11-27 15:48:41] 2025-11-27 22:48:01,316 | INFO     | chi2: 0.022287803402126886
[2025-11-27 15:48:41] 2025-11-27 22:48:01,316 | INFO     | current memory leak: 13.25 B/s (using 296 data points, chi2=0.02)
[2025-11-27 15:48:41] 2025-11-27 22:48:01,316 | INFO     | could have reported an average CPU frequency of 3975 MHz (14 samples)
[2025-11-27 15:48:41] 2025-11-27 22:48:01,317 | INFO     | ..............................
[2025-11-27 15:48:41] 2025-11-27 22:48:01,317 | INFO     | . Timing measurements:
[2025-11-27 15:48:41] 2025-11-27 22:48:01,317 | INFO     | . get job = 0 s
[2025-11-27 15:48:41] 2025-11-27 22:48:01,317 | INFO     | . initial setup = 3 s
[2025-11-27 15:48:41] 2025-11-27 22:48:01,317 | INFO     | . payload setup = 4 s
[2025-11-27 15:48:41] 2025-11-27 22:48:01,317 | INFO     | . stage-in = 0 s
[2025-11-27 15:48:41] 2025-11-27 22:48:01,317 | INFO     | . payload execution = 19945 s
[2025-11-27 15:48:41] 2025-11-27 22:48:01,317 | INFO     | . stage-out = 2 s
[2025-11-27 15:48:41] 2025-11-27 22:48:01,317 | INFO     | . log creation = 0 s
[2025-11-27 15:48:41] 2025-11-27 22:48:01,317 | INFO     | ..............................
[2025-11-27 15:48:41] 2025-11-27 22:48:01,878 | INFO     | 
[2025-11-27 15:48:41] 2025-11-27 22:48:01,878 | INFO     | job summary report
[2025-11-27 15:48:41] 2025-11-27 22:48:01,878 | INFO     | --------------------------------------------------
[2025-11-27 15:48:41] 2025-11-27 22:48:01,878 | INFO     | PanDA job id: 6898271473
[2025-11-27 15:48:41] 2025-11-27 22:48:01,878 | INFO     | task id: 47556173
[2025-11-27 15:48:41] 2025-11-27 22:48:01,878 | INFO     | errors: (none)
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | pilot state: finished 
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | transexitcode: 0
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | exeerrorcode: 0
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | exeerrordiag: 
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | exitcode: 0
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | exitmsg: OK
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | cpuconsumptiontime: 150648 s
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | nevents: 1000
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | neventsw: 0
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | pid: 462109
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | pgrp: 462109
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | corecount: 8
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | event service: False
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | sizes: {0: 2284322, 3: 2284584, 11: 2284612, 19953: 2318895, 19957: 2327903, 19960: 2327959, 19965: 2328333}
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | --------------------------------------------------
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | 
[2025-11-27 15:48:41] 2025-11-27 22:48:01,879 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-27 15:48:41] 2025-11-27 22:48:01,896 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,896 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,896 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,896 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,896 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,896 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,896 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,896 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,896 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,896 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,897 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,897 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,897 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,897 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,897 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,897 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,897 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:48:41] 2025-11-27 22:48:01,897 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,897 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:48:41] 2025-11-27 22:48:01,897 | INFO     | job 6898271473 has completed (purged errors)
[2025-11-27 15:48:41] 2025-11-27 22:48:01,897 | INFO     | overall cleanup function is called
[2025-11-27 15:48:41] 2025-11-27 22:48:02,912 | INFO     | --- collectZombieJob: --- 10, [462109]
[2025-11-27 15:48:41] 2025-11-27 22:48:02,912 | INFO     | zombie collector waiting for pid 462109
[2025-11-27 15:48:41] 2025-11-27 22:48:02,912 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:48:41] 2025-11-27 22:48:02,913 | INFO     | collected zombie processes
[2025-11-27 15:48:41] 2025-11-27 22:48:02,913 | INFO     | will attempt to kill all subprocesses of pid=462109
[2025-11-27 15:48:41] 2025-11-27 22:48:03,041 | INFO     | process IDs to be killed: [462109] (in reverse order)
[2025-11-27 15:48:41] 2025-11-27 22:48:03,101 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:48:41] 2025-11-27 22:48:03,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:48:41] 2025-11-27 22:48:03,105 | INFO     | did not find any defunct processes belonging to 462109
[2025-11-27 15:48:41] 2025-11-27 22:48:03,109 | INFO     | did not find any defunct processes belonging to 462109
[2025-11-27 15:48:41] 2025-11-27 22:48:03,109 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:48:41] 2025-11-27 22:48:03,110 | INFO     | ready for new job
[2025-11-27 15:48:41] 2025-11-27 22:48:03,110 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:48:41] 2025-11-27 22:48:03,112 | INFO     | ***************************************
[2025-11-27 15:48:41] 2025-11-27 22:48:03,112 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:48:41] 2025-11-27 22:48:03,112 | INFO     | ***************************************
[2025-11-27 15:48:41] 2025-11-27 22:48:03,112 | INFO     | 
[2025-11-27 15:48:41] 2025-11-27 22:48:03,113 | INFO     | architecture information:
[2025-11-27 15:48:41] 2025-11-27 22:48:03,114 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:48:41] 2025-11-27 22:48:03,125 | INFO     | cat /etc/os-release:
[2025-11-27 15:48:41] NAME="CentOS Linux"
[2025-11-27 15:48:41] VERSION="7 (Core)"
[2025-11-27 15:48:41] ID="centos"
[2025-11-27 15:48:41] ID_LIKE="rhel fedora"
[2025-11-27 15:48:41] VERSION_ID="7"
[2025-11-27 15:48:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:48:41] ANSI_COLOR="0;31"
[2025-11-27 15:48:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:48:41] HOME_URL="https://www.centos.org/"
[2025-11-27 15:48:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:48:41] 
[2025-11-27 15:48:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:48:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:48:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:48:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:48:41] 
[2025-11-27 15:48:41] 2025-11-27 22:48:03,125 | INFO     | ***************************************
[2025-11-27 15:48:41] 2025-11-27 22:48:03,627 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-27 15:48:41] 2025-11-27 22:48:03,643 | INFO     | sufficient remaining disk space (379476508672 B)
[2025-11-27 15:48:41] 2025-11-27 22:48:03,643 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:48:41] 2025-11-27 22:48:03,643 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:48:41] 2025-11-27 22:48:03,643 | INFO     | update_server=False
[2025-11-27 15:48:41] 2025-11-27 22:48:03,643 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:48:41] 2025-11-27 22:48:03,713 | INFO     | all data control threads have been joined
[2025-11-27 15:48:41] 2025-11-27 22:48:03,765 | INFO     | all job control threads have been joined
[2025-11-27 15:48:41] 2025-11-27 22:48:03,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:48:41] 2025-11-27 22:48:04,231 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:48:41] 2025-11-27 22:48:04,231 | INFO     | aborting loop
[2025-11-27 15:48:41] 2025-11-27 22:48:04,315 | INFO     | all payload control threads have been joined
[2025-11-27 15:48:41] 2025-11-27 22:48:04,649 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:04,717 | INFO     | [data] control thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:04,770 | INFO     | [job] control thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:04,888 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:04,891 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:05,236 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:05,320 | INFO     | [payload] control thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:05,420 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:05,719 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:05,839 | INFO     | [job] validate thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:05,907 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:05,910 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:05,992 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:06,024 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:06,393 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:48:41] 2025-11-27 22:48:06,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:48:41] 2025-11-27 22:48:07,398 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:10,631 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:48:41] 2025-11-27 22:48:34,169 | INFO     | PID=455425 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 15:48:41] 2025-11-27 22:48:34,169 | INFO     | .. there are 4 such processes running
[2025-11-27 15:48:41] 2025-11-27 22:48:34,169 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:48:41] 2025-11-27 22:48:34,169 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:48:41] 2025-11-27 22:48:34,169 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:48:41] 2025-11-27 22:48:35,827 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:48:41] 2025-11-27 22:48:36,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131786730710848)>', '<ExcThread(monitor, started 131786331891456)>']
[2025-11-27 15:48:41] 2025-11-27 22:48:36,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:48:41] 2025-11-27 22:48:36,175 | INFO     | [monitor] control thread has ended
[2025-11-27 15:48:41] 2025-11-27 22:48:41,181 | INFO     | all workflow threads have been joined
[2025-11-27 15:48:41] 2025-11-27 22:48:41,181 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:48:41] 2025-11-27 22:48:41,182 | INFO     | traces error code: 0
[2025-11-27 15:48:41] 2025-11-27 22:48:41,182 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:48:41] 2025-11-27 22:48:41,263 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:48:41] 2025-11-27 22:48:41,265 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:48:41] 2025-11-27 22:48:41,267 [wrapper] pilotpid: 455425
[2025-11-27 15:48:41] 2025-11-27 22:48:41,269 [wrapper] Pilot exit status: 0
[2025-11-27 15:48:41] 2025-11-27 22:48:41,276 [wrapper] pandaids: 6898271473
[2025-11-27 15:48:41] 2025-11-27 22:48:41,308 [wrapper] cleanup supervisor_pilot  632429 455426
[2025-11-27 15:48:41] 2025-11-27 22:48:41,310 [wrapper] Test setup, not cleaning
[2025-11-27 15:48:41] 2025-11-27 22:48:41,312 [wrapper] apfmon messages muted
[2025-11-27 15:48:41] 2025-11-27 22:48:41,314 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:48:41] 2025-11-27 22:48:41,316 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:48:41]  *** Error codes and diagnostics ***
[2025-11-27 15:48:41]     "exeErrorCode": 0,
[2025-11-27 15:48:41]     "exeErrorDiag": "",
[2025-11-27 15:48:41]     "pilotErrorCode": 0,
[2025-11-27 15:48:41]     "pilotErrorDiag": "",
[2025-11-27 15:48:41]  *** Listing of results directory ***
[2025-11-27 15:48:41] total 1303176
[2025-11-27 15:48:41] -rw-r--r-- 1 boinc boinc    576529 Nov 26 08:05 pilot3.tar.gz
[2025-11-27 15:48:41] -rwx------ 1 boinc boinc     36292 Nov 26 08:14 runpilot2-wrapper.sh
[2025-11-27 15:48:41] -rw-r--r-- 1 boinc boinc      5112 Nov 26 08:14 queuedata.json
[2025-11-27 15:48:41] -rw-r--r-- 1 boinc boinc       100 Nov 27 10:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:48:41] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 10:14 run_atlas
[2025-11-27 15:48:41] -rw-r--r-- 1 boinc boinc       105 Nov 27 10:14 job.xml
[2025-11-27 15:48:41] -rw-r--r-- 1 boinc boinc      9772 Nov 27 10:14 init_data.xml
[2025-11-27 15:48:41] -rw-r--r-- 2 boinc boinc 407847544 Nov 27 10:14 EVNT.47483658._003190.pool.root.1
[2025-11-27 15:48:41] -rw-r--r-- 2 boinc boinc     15847 Nov 27 10:14 start_atlas.sh
[2025-11-27 15:48:41] drwxrwx--x 2 boinc boinc      4096 Nov 27 10:14 shared
[2025-11-27 15:48:41] -rw-r--r-- 2 boinc boinc    590099 Nov 27 10:14 input.tar.gz
[2025-11-27 15:48:41] -rw-r--r-- 1 boinc boinc         0 Nov 27 10:14 boinc_lockfile
[2025-11-27 15:48:41] -rw-r--r-- 1 boinc boinc      2786 Nov 27 10:14 pandaJob.out
[2025-11-27 15:48:41] -rw------- 1 boinc boinc    991564 Nov 27 10:14 agis_schedconf.cvmfs.json
[2025-11-27 15:48:41] drwx------ 5 boinc boinc      4096 Nov 27 10:15 pilot3
[2025-11-27 15:48:41] -rw-r--r-- 1 boinc boinc       533 Nov 27 15:42 boinc_task_state.xml
[2025-11-27 15:48:41] -rw------- 1 boinc boinc 913668034 Nov 27 15:47 HITS.47556173._001464.pool.root.1
[2025-11-27 15:48:41] -rw------- 1 boinc boinc        95 Nov 27 15:47 pilot_heartbeat.json
[2025-11-27 15:48:41] -rw------- 1 boinc boinc      1037 Nov 27 15:47 memory_monitor_summary.json
[2025-11-27 15:48:41] -rw------- 1 boinc boinc   1516240 Nov 27 15:47 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:48:41] -rw------- 1 boinc boinc   1633174 Nov 27 15:47 log.47556173._001464.job.log.tgz.1
[2025-11-27 15:48:41] -rw------- 1 boinc boinc      8593 Nov 27 15:48 heartbeat.json
[2025-11-27 15:48:41] -rw-r--r-- 1 boinc boinc      8192 Nov 27 15:48 boinc_mmap_file
[2025-11-27 15:48:41] -rw-r--r-- 1 boinc boinc        29 Nov 27 15:48 wrapper_checkpoint.txt
[2025-11-27 15:48:41] -rw------- 1 boinc boinc      4830 Nov 27 15:48 pilotlog.txt
[2025-11-27 15:48:41] -rw------- 1 boinc boinc   2872702 Nov 27 15:48 log.47556173._001464.job.log.1
[2025-11-27 15:48:41] -rw------- 1 boinc boinc       353 Nov 27 15:48 output.list
[2025-11-27 15:48:41] -rw-r--r-- 1 boinc boinc       620 Nov 27 15:48 runtime_log
[2025-11-27 15:48:41] -rw------- 1 boinc boinc   4526080 Nov 27 15:48 result.tar.gz
[2025-11-27 15:48:41] -rw-r--r-- 1 boinc boinc      8968 Nov 27 15:48 runtime_log.err
[2025-11-27 15:48:41] -rw------- 1 boinc boinc       663 Nov 27 15:48 rOkNDmDPWi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm73MKDm1aWEWo.diag
[2025-11-27 15:48:41] -rw-r--r-- 1 boinc boinc     21435 Nov 27 15:48 stderr.txt
[2025-11-27 15:48:41] HITS file was successfully produced:
[2025-11-27 15:48:41] -rw------- 1 boinc boinc 913668034 Nov 27 15:47 shared/HITS.pool.root.1
[2025-11-27 15:48:41]  *** Contents of shared directory: ***
[2025-11-27 15:48:41] total 1295572
[2025-11-27 15:48:41] -rw-r--r-- 2 boinc boinc 407847544 Nov 27 10:14 ATLAS.root_0
[2025-11-27 15:48:41] -rw-r--r-- 2 boinc boinc     15847 Nov 27 10:14 start_atlas.sh
[2025-11-27 15:48:41] -rw-r--r-- 2 boinc boinc    590099 Nov 27 10:14 input.tar.gz
[2025-11-27 15:48:41] -rw------- 1 boinc boinc 913668034 Nov 27 15:47 HITS.pool.root.1
[2025-11-27 15:48:41] -rw------- 1 boinc boinc   4526080 Nov 27 15:48 result.tar.gz
15:48:43 (451578): run_atlas exited; CPU time 150511.340588
15:48:43 (451578): called boinc_finish(0)

</stderr_txt>
]]>

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