Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:48:24 (293619): wrapper (7.7.26015): starting
06:48:24 (293619): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 06:48:24] Arguments: --nthreads 8
[2025-11-27 06:48:24] Threads: 8
[2025-11-27 06:48:24] Checking for CVMFS
[2025-11-27 06:48:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 06:48:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 06:48:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 06:48:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 06:48:25] 2.13.3.0 12497 31315 241900 153362 3 480 22376223 32935936 44042 16776704 0 168891696 99.506 209876908 37113 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 06:48:25] CVMFS is ok
[2025-11-27 06:48:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 06:48:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 06:48:25] Further information can be found at the LHC@home message board.
[2025-11-27 06:48:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 06:48:25] Checking for apptainer binary...
[2025-11-27 06:48:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 06:48:25] Running /usr/bin/apptainer --version
[2025-11-27 06:48:25] apptainer version 1.4.4-1.el9
[2025-11-27 06:48:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 06:48:26] c7-7-35.aglt2.org
[2025-11-27 06:48:26] apptainer works
[2025-11-27 06:48:26] Set ATHENA_PROC_NUMBER=8
[2025-11-27 06:48:26] Set ATHENA_CORE_NUMBER=8
[2025-11-27 06:48:26] Starting ATLAS job with PandaID=6898271247
[2025-11-27 06:48:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:18:44]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:18:44] 2025-11-28 00:18:09,570 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:18:44] 2025-11-28 00:18:09,570 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:18:44] 2025-11-28 00:18:09,580 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:18:44] 2025-11-28 00:18:09,581 | INFO     | sum of square deviations: 123147950528.39989
[2025-11-27 19:18:44] 2025-11-28 00:18:09,592 | INFO     | sum of deviations: 1802796658858.8848
[2025-11-27 19:18:44] 2025-11-28 00:18:09,592 | INFO     | mean x: 1764266624.3142858
[2025-11-27 19:18:44] 2025-11-28 00:18:09,592 | INFO     | mean y: 2866225.8013605443
[2025-11-27 19:18:44] 2025-11-28 00:18:09,592 | INFO     | intersect: -25824717278.453037
[2025-11-27 19:18:44] 2025-11-28 00:18:09,593 | INFO     | chi2: 14.331871955901802
[2025-11-27 19:18:44] 2025-11-28 00:18:09,594 | INFO     | sum of square deviations: 120652803908.93709
[2025-11-27 19:18:44] 2025-11-28 00:18:09,605 | INFO     | sum of deviations: 2028551886273.5923
[2025-11-27 19:18:44] 2025-11-28 00:18:09,605 | INFO     | mean x: 1764266471.830137
[2025-11-27 19:18:44] 2025-11-28 00:18:09,605 | INFO     | mean y: 2880017.182191781
[2025-11-27 19:18:44] 2025-11-28 00:18:09,605 | INFO     | intersect: -29659970437.760124
[2025-11-27 19:18:44] 2025-11-28 00:18:09,606 | INFO     | chi2: 11.592009510649282
[2025-11-27 19:18:44] 2025-11-28 00:18:09,606 | INFO     | current chi2=11.592009510649282 (change=19.11726851651264 %)
[2025-11-27 19:18:44] 2025-11-28 00:18:09,606 | INFO     | right removable region: 729
[2025-11-27 19:18:44] 2025-11-28 00:18:09,607 | INFO     | sum of square deviations: 120651766298.9372
[2025-11-27 19:18:44] 2025-11-28 00:18:09,618 | INFO     | sum of deviations: 1496375302978.4275
[2025-11-27 19:18:44] 2025-11-28 00:18:09,618 | INFO     | mean x: 1764266776.830137
[2025-11-27 19:18:44] 2025-11-28 00:18:09,618 | INFO     | mean y: 2884945.398630137
[2025-11-27 19:18:44] 2025-11-28 00:18:09,618 | INFO     | intersect: -21878313429.87311
[2025-11-27 19:18:44] 2025-11-28 00:18:09,619 | INFO     | chi2: 9.551358175929526
[2025-11-27 19:18:44] 2025-11-28 00:18:09,619 | INFO     | current chi2=9.551358175929526 (change=33.355822565828056 %)
[2025-11-27 19:18:44] 2025-11-28 00:18:09,620 | INFO     | sum of square deviations: 118189536194.10211
[2025-11-27 19:18:44] 2025-11-28 00:18:09,630 | INFO     | sum of deviations: 1230186519587.2793
[2025-11-27 19:18:44] 2025-11-28 00:18:09,630 | INFO     | mean x: 1764266929.346207
[2025-11-27 19:18:44] 2025-11-28 00:18:09,631 | INFO     | mean y: 2901433.755862069
[2025-11-27 19:18:44] 2025-11-28 00:18:09,631 | INFO     | intersect: -18360631103.261173
[2025-11-27 19:18:44] 2025-11-28 00:18:09,631 | INFO     | chi2: 6.132326082872139
[2025-11-27 19:18:44] 2025-11-28 00:18:09,632 | INFO     | current chi2=6.132326082872139 (change=35.79629231865395 %)
[2025-11-27 19:18:44] 2025-11-28 00:18:09,632 | INFO     | sum of square deviations: 115761027651.38742
[2025-11-27 19:18:44] 2025-11-28 00:18:09,643 | INFO     | sum of deviations: 993534265804.3228
[2025-11-27 19:18:44] 2025-11-28 00:18:09,643 | INFO     | mean x: 1764267081.8625
[2025-11-27 19:18:44] 2025-11-28 00:18:09,643 | INFO     | mean y: 2916284.6194444443
[2025-11-27 19:18:44] 2025-11-28 00:18:09,643 | INFO     | intersect: -15139138303.386675
[2025-11-27 19:18:44] 2025-11-28 00:18:09,644 | INFO     | chi2: 3.4415335036631856
[2025-11-27 19:18:44] 2025-11-28 00:18:09,644 | INFO     | current chi2=3.4415335036631856 (change=43.87882416632177 %)
[2025-11-27 19:18:44] 2025-11-28 00:18:09,645 | INFO     | sum of square deviations: 113366403289.99474
[2025-11-27 19:18:44] 2025-11-28 00:18:09,655 | INFO     | sum of deviations: 931649963757.7313
[2025-11-27 19:18:44] 2025-11-28 00:18:09,656 | INFO     | mean x: 1764267234.3664336
[2025-11-27 19:18:44] 2025-11-28 00:18:09,656 | INFO     | mean y: 2920224.588811189
[2025-11-27 19:18:44] 2025-11-28 00:18:09,656 | INFO     | intersect: -14495903564.958944
[2025-11-27 19:18:44] 2025-11-28 00:18:09,656 | INFO     | chi2: 3.3557508491025327
[2025-11-27 19:18:44] 2025-11-28 00:18:09,657 | INFO     | current chi2=3.3557508491025327 (change=2.49257066564499 %)
[2025-11-27 19:18:44] 2025-11-28 00:18:09,657 | INFO     | left removable region: 40
[2025-11-27 19:18:44] 2025-11-28 00:18:09,657 | INFO     | sum of square deviations: 101445221394.69376
[2025-11-27 19:18:44] 2025-11-28 00:18:09,667 | INFO     | sum of deviations: 1024971714636.8274
[2025-11-27 19:18:44] 2025-11-28 00:18:09,668 | INFO     | mean x: 1764267661.4281569
[2025-11-27 19:18:44] 2025-11-28 00:18:09,668 | INFO     | mean y: 2947001.8955007256
[2025-11-27 19:18:44] 2025-11-28 00:18:09,668 | INFO     | intersect: -17822677755.496086
[2025-11-27 19:18:44] 2025-11-28 00:18:09,669 | INFO     | chi2: 0.22698692690149666
[2025-11-27 19:18:44] 2025-11-28 00:18:09,669 | INFO     | current memory leak: 10.10 B/s (using 689 data points, chi2=0.23)
[2025-11-27 19:18:44] 2025-11-28 00:18:09,670 | INFO     | could have reported an average CPU frequency of 3176 MHz (28 samples)
[2025-11-27 19:18:44] 2025-11-28 00:18:09,670 | INFO     | ..............................
[2025-11-27 19:18:44] 2025-11-28 00:18:09,670 | INFO     | . Timing measurements:
[2025-11-27 19:18:44] 2025-11-28 00:18:09,670 | INFO     | . get job = 0 s
[2025-11-27 19:18:44] 2025-11-28 00:18:09,670 | INFO     | . initial setup = 4 s
[2025-11-27 19:18:44] 2025-11-28 00:18:09,670 | INFO     | . payload setup = 25 s
[2025-11-27 19:18:44] 2025-11-28 00:18:09,670 | INFO     | . stage-in = 0 s
[2025-11-27 19:18:44] 2025-11-28 00:18:09,670 | INFO     | . payload execution = 44852 s
[2025-11-27 19:18:44] 2025-11-28 00:18:09,670 | INFO     | . stage-out = 3 s
[2025-11-27 19:18:44] 2025-11-28 00:18:09,671 | INFO     | . log creation = 0 s
[2025-11-27 19:18:44] 2025-11-28 00:18:09,671 | INFO     | ..............................
[2025-11-27 19:18:44] 2025-11-28 00:18:09,753 | INFO     | 
[2025-11-27 19:18:44] 2025-11-28 00:18:09,753 | INFO     | job summary report
[2025-11-27 19:18:44] 2025-11-28 00:18:09,753 | INFO     | --------------------------------------------------
[2025-11-27 19:18:44] 2025-11-28 00:18:09,753 | INFO     | PanDA job id: 6898271247
[2025-11-27 19:18:44] 2025-11-28 00:18:09,753 | INFO     | task id: 47556161
[2025-11-27 19:18:44] 2025-11-28 00:18:09,753 | INFO     | errors: (none)
[2025-11-27 19:18:44] 2025-11-28 00:18:09,753 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:18:44] 2025-11-28 00:18:09,753 | INFO     | pilot state: finished 
[2025-11-27 19:18:44] 2025-11-28 00:18:09,753 | INFO     | transexitcode: 0
[2025-11-27 19:18:44] 2025-11-28 00:18:09,753 | INFO     | exeerrorcode: 0
[2025-11-27 19:18:44] 2025-11-28 00:18:09,754 | INFO     | exeerrordiag: 
[2025-11-27 19:18:44] 2025-11-28 00:18:09,754 | INFO     | exitcode: 0
[2025-11-27 19:18:44] 2025-11-28 00:18:09,754 | INFO     | exitmsg: OK
[2025-11-27 19:18:44] 2025-11-28 00:18:09,754 | INFO     | cpuconsumptiontime: 191439 s
[2025-11-27 19:18:44] 2025-11-28 00:18:09,754 | INFO     | nevents: 1000
[2025-11-27 19:18:44] 2025-11-28 00:18:09,754 | INFO     | neventsw: 0
[2025-11-27 19:18:44] 2025-11-28 00:18:09,754 | INFO     | pid: 316410
[2025-11-27 19:18:44] 2025-11-28 00:18:09,754 | INFO     | pgrp: 316410
[2025-11-27 19:18:44] 2025-11-28 00:18:09,754 | INFO     | corecount: 8
[2025-11-27 19:18:44] 2025-11-28 00:18:09,754 | INFO     | event service: False
[2025-11-27 19:18:44] 2025-11-28 00:18:09,754 | INFO     | sizes: {0: 2284088, 1: 2284343, 2: 2284343, 12: 2284371, 18: 2284661, 23: 2284689, 44882: 2330247, 44886: 2339241, 44889: 2339325, 44898: 2339571}
[2025-11-27 19:18:44] 2025-11-28 00:18:09,754 | INFO     | --------------------------------------------------
[2025-11-27 19:18:44] 2025-11-28 00:18:09,754 | INFO     | 
[2025-11-27 19:18:44] 2025-11-28 00:18:09,754 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 19:18:44] 2025-11-28 00:18:09,775 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,775 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,775 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,775 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,775 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,775 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,775 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,776 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,776 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,776 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,776 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,776 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,776 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,776 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,776 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,776 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:18:44] 2025-11-28 00:18:09,776 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,776 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:18:44] 2025-11-28 00:18:09,776 | INFO     | job 6898271247 has completed (purged errors)
[2025-11-27 19:18:44] 2025-11-28 00:18:09,777 | INFO     | overall cleanup function is called
[2025-11-27 19:18:44] 2025-11-28 00:18:10,793 | INFO     | --- collectZombieJob: --- 10, [316410]
[2025-11-27 19:18:44] 2025-11-28 00:18:10,798 | INFO     | zombie collector waiting for pid 316410
[2025-11-27 19:18:44] 2025-11-28 00:18:10,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:18:44] 2025-11-28 00:18:10,798 | INFO     | collected zombie processes
[2025-11-27 19:18:44] 2025-11-28 00:18:10,798 | INFO     | will attempt to kill all subprocesses of pid=316410
[2025-11-27 19:18:44] 2025-11-28 00:18:11,451 | INFO     | process IDs to be killed: [316410] (in reverse order)
[2025-11-27 19:18:44] 2025-11-28 00:18:11,673 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:18:44] 2025-11-28 00:18:11,673 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:18:44] 2025-11-28 00:18:11,710 | INFO     | did not find any defunct processes belonging to 316410
[2025-11-27 19:18:44] 2025-11-28 00:18:11,767 | INFO     | did not find any defunct processes belonging to 316410
[2025-11-27 19:18:44] 2025-11-28 00:18:11,768 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:18:44] 2025-11-28 00:18:11,769 | INFO     | ready for new job
[2025-11-27 19:18:44] 2025-11-28 00:18:11,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:18:44] 2025-11-28 00:18:11,772 | INFO     | ***************************************
[2025-11-27 19:18:44] 2025-11-28 00:18:11,772 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:18:44] 2025-11-28 00:18:11,773 | INFO     | ***************************************
[2025-11-27 19:18:44] 2025-11-28 00:18:11,773 | INFO     | 
[2025-11-27 19:18:44] 2025-11-28 00:18:11,778 | INFO     | architecture information:
[2025-11-27 19:18:44] 2025-11-28 00:18:11,778 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:18:44] 2025-11-28 00:18:11,798 | INFO     | cat /etc/os-release:
[2025-11-27 19:18:44] NAME="CentOS Linux"
[2025-11-27 19:18:44] VERSION="7 (Core)"
[2025-11-27 19:18:44] ID="centos"
[2025-11-27 19:18:44] ID_LIKE="rhel fedora"
[2025-11-27 19:18:44] VERSION_ID="7"
[2025-11-27 19:18:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:18:44] ANSI_COLOR="0;31"
[2025-11-27 19:18:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:18:44] HOME_URL="https://www.centos.org/"
[2025-11-27 19:18:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:18:44] 
[2025-11-27 19:18:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:18:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:18:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:18:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:18:44] 
[2025-11-27 19:18:44] 2025-11-28 00:18:11,798 | INFO     | ***************************************
[2025-11-27 19:18:44] 2025-11-28 00:18:12,301 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 19:18:44] 2025-11-28 00:18:12,321 | INFO     | sufficient remaining disk space (65289584640 B)
[2025-11-27 19:18:44] 2025-11-28 00:18:12,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:18:44] 2025-11-28 00:18:12,322 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:18:44] 2025-11-28 00:18:12,322 | INFO     | update_server=False
[2025-11-27 19:18:44] 2025-11-28 00:18:12,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:18:44] 2025-11-28 00:18:12,322 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:18:44] 2025-11-28 00:18:12,322 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:18:44] 2025-11-28 00:18:12,703 | INFO     | all data control threads have been joined
[2025-11-27 19:18:44] 2025-11-28 00:18:12,813 | INFO     | all job control threads have been joined
[2025-11-27 19:18:44] 2025-11-28 00:18:12,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:18:44] 2025-11-28 00:18:12,866 | INFO     | aborting loop
[2025-11-27 19:18:44] 2025-11-28 00:18:13,328 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:13,514 | INFO     | all payload control threads have been joined
[2025-11-27 19:18:44] 2025-11-28 00:18:13,519 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:13,623 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:13,709 | INFO     | [data] control thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:13,819 | INFO     | [job] control thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:13,872 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:13,935 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:14,013 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:14,131 | INFO     | [job] validate thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:14,184 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:14,301 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:14,329 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:14,531 | INFO     | [payload] control thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:14,548 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:14,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:18:44] 2025-11-28 00:18:15,784 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:16,331 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:18:44] 2025-11-28 00:18:29,903 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:18:44] 2025-11-28 00:18:30,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139910327179072)>', '<ExcThread(monitor, started 139909675337472)>']
[2025-11-27 19:18:44] 2025-11-28 00:18:35,307 | INFO     | all workflow threads have been joined
[2025-11-27 19:18:44] 2025-11-28 00:18:35,307 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:18:44] 2025-11-28 00:18:35,311 | INFO     | traces error code: 0
[2025-11-27 19:18:44] 2025-11-28 00:18:35,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:18:44] 2025-11-28 00:18:43,184 | INFO     | PID=302596 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 19:18:44] 2025-11-28 00:18:43,189 | INFO     | .. there are 66 such processes running
[2025-11-27 19:18:44] 2025-11-28 00:18:43,189 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:18:44] 2025-11-28 00:18:43,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:18:44] 2025-11-28 00:18:43,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:18:44] 2025-11-28 00:18:43,189 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:18:44] 2025-11-28 00:18:43,189 | INFO     | [monitor] control thread has ended
[2025-11-27 19:18:44] 2025-11-28 00:18:43,729 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:18:44] 2025-11-28 00:18:43,732 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:18:44] 2025-11-28 00:18:43,738 [wrapper] pilotpid: 302596
[2025-11-27 19:18:44] 2025-11-28 00:18:43,742 [wrapper] Pilot exit status: 0
[2025-11-27 19:18:44] 2025-11-28 00:18:43,775 [wrapper] pandaids: 6898271247
[2025-11-27 19:18:44] 2025-11-28 00:18:43,952 [wrapper] cleanup supervisor_pilot   30504 302597
[2025-11-27 19:18:44] 2025-11-28 00:18:43,955 [wrapper] Test setup, not cleaning
[2025-11-27 19:18:44] 2025-11-28 00:18:43,958 [wrapper] apfmon messages muted
[2025-11-27 19:18:44] 2025-11-28 00:18:43,959 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:18:44] 2025-11-28 00:18:43,961 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:18:44]  *** Error codes and diagnostics ***
[2025-11-27 19:18:44]     "exeErrorCode": 0,
[2025-11-27 19:18:44]     "exeErrorDiag": "",
[2025-11-27 19:18:44]     "pilotErrorCode": 0,
[2025-11-27 19:18:44]     "pilotErrorDiag": "",
[2025-11-27 19:18:44]  *** Listing of results directory ***
[2025-11-27 19:18:44] total 1318664
[2025-11-27 19:18:44] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 09:19 pilot3.tar.gz
[2025-11-27 19:18:44] -rwx------. 1 boincer umatlas     36292 Nov 26 09:55 runpilot2-wrapper.sh
[2025-11-27 19:18:44] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 09:55 queuedata.json
[2025-11-27 19:18:44] -rw-r--r--. 1 boincer umatlas       100 Nov 27 06:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:18:44] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 06:48 run_atlas
[2025-11-27 19:18:44] -rw-r--r--. 1 boincer umatlas       105 Nov 27 06:48 job.xml
[2025-11-27 19:18:44] -rw-r--r--. 2 boincer umatlas 409129550 Nov 27 06:48 EVNT.47483658._002530.pool.root.1
[2025-11-27 19:18:44] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 06:48 start_atlas.sh
[2025-11-27 19:18:44] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 06:48 shared
[2025-11-27 19:18:44] -rw-r--r--. 2 boincer umatlas    590108 Nov 27 06:48 input.tar.gz
[2025-11-27 19:18:44] -rw-r--r--. 1 boincer umatlas         0 Nov 27 06:48 boinc_lockfile
[2025-11-27 19:18:44] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 06:48 pandaJob.out
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas        57 Nov 27 06:48 setup.sh.local
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas    991572 Nov 27 06:49 agis_schedconf.cvmfs.json
[2025-11-27 19:18:44] drwx------. 5 boincer umatlas      4096 Nov 27 06:49 pilot3
[2025-11-27 19:18:44] -rw-r--r--. 1 boincer umatlas       533 Nov 27 19:08 boinc_task_state.xml
[2025-11-27 19:18:44] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 19:09 init_data.xml
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas 922204516 Nov 27 19:17 HITS.47556161._005126.pool.root.1
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas      1072 Nov 27 19:17 memory_monitor_summary.json
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas   1516240 Nov 27 19:17 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas   1938616 Nov 27 19:17 log.47556161._005126.job.log.tgz.1
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas        95 Nov 27 19:18 pilot_heartbeat.json
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas      8625 Nov 27 19:18 heartbeat.json
[2025-11-27 19:18:44] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:18 boinc_mmap_file
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas       822 Nov 27 19:18 pilotlog.txt
[2025-11-27 19:18:44] -rw-r--r--. 1 boincer umatlas        29 Nov 27 19:18 wrapper_checkpoint.txt
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas   5589708 Nov 27 19:18 log.47556161._005126.job.log.1
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas       353 Nov 27 19:18 output.list
[2025-11-27 19:18:44] -rw-r--r--. 1 boincer umatlas       620 Nov 27 19:18 runtime_log
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas   7546880 Nov 27 19:18 result.tar.gz
[2025-11-27 19:18:44] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 19:18 runtime_log.err
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas       664 Nov 27 19:18 cK2KDm16Vi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmx2MKDm38VKAn.diag
[2025-11-27 19:18:44] -rw-r--r--. 1 boincer umatlas     21152 Nov 27 19:18 stderr.txt
[2025-11-27 19:18:44] HITS file was successfully produced:
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas 922204516 Nov 27 19:17 shared/HITS.pool.root.1
[2025-11-27 19:18:44]  *** Contents of shared directory: ***
[2025-11-27 19:18:44] total 1308112
[2025-11-27 19:18:44] -rw-r--r--. 2 boincer umatlas 409129550 Nov 27 06:48 ATLAS.root_0
[2025-11-27 19:18:44] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 06:48 start_atlas.sh
[2025-11-27 19:18:44] -rw-r--r--. 2 boincer umatlas    590108 Nov 27 06:48 input.tar.gz
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas 922204516 Nov 27 19:17 HITS.pool.root.1
[2025-11-27 19:18:44] -rw-------. 1 boincer umatlas   7546880 Nov 27 19:18 result.tar.gz
19:18:45 (293619): run_atlas exited; CPU time 192690.983940
19:18:45 (293619): called boinc_finish(0)

</stderr_txt>
]]>

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