Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:58:37 (3451322): wrapper (7.7.26015): starting
06:58:37 (3451322): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 06:58:37] Arguments: --nthreads 8
[2025-11-27 06:58:37] Threads: 8
[2025-11-27 06:58:37] Checking for CVMFS
[2025-11-27 06:58:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 06:58:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 06:58:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 06:58:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 06:58:38] 2.13.3.0 11772 31415 362696 153362 3 643 18281670 32935937 51553 16776704 0 184233291 99.514 236559055 38805 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 06:58:38] CVMFS is ok
[2025-11-27 06:58:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 06:58:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 06:58:38] Further information can be found at the LHC@home message board.
[2025-11-27 06:58:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 06:58:38] Checking for apptainer binary...
[2025-11-27 06:58:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 06:58:38] Running /usr/bin/apptainer --version
[2025-11-27 06:58:38] apptainer version 1.4.4-1.el9
[2025-11-27 06:58:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 06:58:38] c7-3-28.aglt2.org
[2025-11-27 06:58:38] apptainer works
[2025-11-27 06:58:38] Set ATHENA_PROC_NUMBER=8
[2025-11-27 06:58:38] Set ATHENA_CORE_NUMBER=8
[2025-11-27 06:58:38] Starting ATLAS job with PandaID=6898271220
[2025-11-27 06:58:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:33:37]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:33:37] 2025-11-28 02:32:55,314 | INFO     | time since job start (52437s) is within the limit (172800.0s)
[2025-11-27 21:33:37] 2025-11-28 02:32:56,103 | INFO     | monitor loop #2940: job 0:6898271220 is in state 'finished'
[2025-11-27 21:33:37] 2025-11-28 02:32:56,103 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 21:33:37] 2025-11-28 02:32:57,320 | INFO     | time since job start (52439s) is within the limit (172800.0s)
[2025-11-27 21:33:37] 2025-11-28 02:32:58,607 | INFO     | monitor loop #2941: job 0:6898271220 is in state 'finished'
[2025-11-27 21:33:37] 2025-11-28 02:32:58,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 21:33:37] 2025-11-28 02:32:59,327 | INFO     | time since job start (52441s) is within the limit (172800.0s)
[2025-11-27 21:33:37] 2025-11-28 02:33:01,110 | INFO     | monitor loop #2942: job 0:6898271220 is in state 'finished'
[2025-11-27 21:33:37] 2025-11-28 02:33:01,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 21:33:37] 2025-11-28 02:33:01,187 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 21:33:37] 2025-11-28 02:33:01,193 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3184.6164374999994
[2025-11-27 21:33:37] 2025-11-28 02:33:01,207 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6898271220/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 21:33:37] 2025-11-28 02:33:01,208 | INFO     | extracted standard info from prmon json
[2025-11-27 21:33:37] 2025-11-28 02:33:01,208 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 21:33:37] 2025-11-28 02:33:01,208 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 21:33:37] 2025-11-28 02:33:01,220 | INFO     | fitting pss+swap vs Time
[2025-11-27 21:33:37] 2025-11-28 02:33:01,221 | INFO     | sum of square deviations: 196539916831.48813
[2025-11-27 21:33:37] 2025-11-28 02:33:01,237 | INFO     | sum of deviations: 6441722097620.999
[2025-11-27 21:33:37] 2025-11-28 02:33:01,238 | INFO     | mean x: 1764270961.6332946
[2025-11-27 21:33:37] 2025-11-28 02:33:01,238 | INFO     | mean y: 4220788.0
[2025-11-27 21:33:37] 2025-11-28 02:33:01,238 | INFO     | intersect: -57820893941.68854
[2025-11-27 21:33:37] 2025-11-28 02:33:01,239 | INFO     | chi2: 12.395938749255103
[2025-11-27 21:33:37] 2025-11-28 02:33:01,239 | INFO     | sum of square deviations: 193127953656.9708
[2025-11-27 21:33:37] 2025-11-28 02:33:01,255 | INFO     | sum of deviations: 6864845628499.43
[2025-11-27 21:33:37] 2025-11-28 02:33:01,256 | INFO     | mean x: 1764270809.1370022
[2025-11-27 21:33:37] 2025-11-28 02:33:01,256 | INFO     | mean y: 4239694.201405153
[2025-11-27 21:33:37] 2025-11-28 02:33:01,256 | INFO     | intersect: -62707794075.41726
[2025-11-27 21:33:37] 2025-11-28 02:33:01,257 | INFO     | chi2: 8.935685585605542
[2025-11-27 21:33:37] 2025-11-28 02:33:01,257 | INFO     | current chi2=8.935685585605542 (change=27.91440998252347 %)
[2025-11-27 21:33:37] 2025-11-28 02:33:01,258 | INFO     | sum of square deviations: 189755712157.4299
[2025-11-27 21:33:37] 2025-11-28 02:33:01,273 | INFO     | sum of deviations: 6938600040835.574
[2025-11-27 21:33:37] 2025-11-28 02:33:01,273 | INFO     | mean x: 1764270656.6407537
[2025-11-27 21:33:37] 2025-11-28 02:33:01,274 | INFO     | mean y: 4243008.405182567
[2025-11-27 21:33:37] 2025-11-28 02:33:01,274 | INFO     | intersect: -64508009671.800735
[2025-11-27 21:33:37] 2025-11-28 02:33:01,275 | INFO     | chi2: 8.253866989481484
[2025-11-27 21:33:37] 2025-11-28 02:33:01,275 | INFO     | current chi2=8.253866989481484 (change=7.630288572623874 %)
[2025-11-27 21:33:37] 2025-11-28 02:33:01,275 | INFO     | right removable region: 848
[2025-11-27 21:33:37] 2025-11-28 02:33:01,276 | INFO     | sum of square deviations: 193127726249.51392
[2025-11-27 21:33:37] 2025-11-28 02:33:01,291 | INFO     | sum of deviations: 6058524726840.981
[2025-11-27 21:33:37] 2025-11-28 02:33:01,291 | INFO     | mean x: 1764271114.1346605
[2025-11-27 21:33:37] 2025-11-28 02:33:01,291 | INFO     | mean y: 4237895.608899297
[2025-11-27 21:33:37] 2025-11-28 02:33:01,291 | INFO     | intersect: -55341933145.75928
[2025-11-27 21:33:37] 2025-11-28 02:33:01,292 | INFO     | chi2: 10.056206611441752
[2025-11-27 21:33:37] 2025-11-28 02:33:01,292 | INFO     | current chi2=10.056206611441752 (change=18.874989503751387 %)
[2025-11-27 21:33:37] 2025-11-28 02:33:01,292 | INFO     | left removable region: 10
[2025-11-27 21:33:37] 2025-11-28 02:33:01,293 | INFO     | sum of square deviations: 182474998075.5287
[2025-11-27 21:33:37] 2025-11-28 02:33:01,307 | INFO     | sum of deviations: 6324122332950.618
[2025-11-27 21:33:37] 2025-11-28 02:33:01,308 | INFO     | mean x: 1764270931.1443913
[2025-11-27 21:33:37] 2025-11-28 02:33:01,308 | INFO     | mean y: 4269951.408114558
[2025-11-27 21:33:37] 2025-11-28 02:33:01,308 | INFO     | intersect: -61140902344.51165
[2025-11-27 21:33:37] 2025-11-28 02:33:01,309 | INFO     | chi2: 5.5937047372591415
[2025-11-27 21:33:37] 2025-11-28 02:33:01,309 | INFO     | current memory leak: 34.66 B/s (using 838 data points, chi2=5.59)
[2025-11-27 21:33:37] 2025-11-28 02:33:01,310 | INFO     | could have reported an average CPU frequency of 3195 MHz (32 samples)
[2025-11-27 21:33:37] 2025-11-28 02:33:01,310 | INFO     | ..............................
[2025-11-27 21:33:37] 2025-11-28 02:33:01,310 | INFO     | . Timing measurements:
[2025-11-27 21:33:37] 2025-11-28 02:33:01,310 | INFO     | . get job = 0 s
[2025-11-27 21:33:37] 2025-11-28 02:33:01,310 | INFO     | . initial setup = 3 s
[2025-11-27 21:33:37] 2025-11-28 02:33:01,310 | INFO     | . payload setup = 13 s
[2025-11-27 21:33:37] 2025-11-28 02:33:01,310 | INFO     | . stage-in = 0 s
[2025-11-27 21:33:37] 2025-11-28 02:33:01,310 | INFO     | . payload execution = 52384 s
[2025-11-27 21:33:37] 2025-11-28 02:33:01,311 | INFO     | . stage-out = 3 s
[2025-11-27 21:33:37] 2025-11-28 02:33:01,311 | INFO     | . log creation = 0 s
[2025-11-27 21:33:37] 2025-11-28 02:33:01,311 | INFO     | ..............................
[2025-11-27 21:33:37] 2025-11-28 02:33:01,343 | INFO     | time since job start (52443s) is within the limit (172800.0s)
[2025-11-27 21:33:37] 2025-11-28 02:33:01,394 | INFO     | 
[2025-11-27 21:33:37] 2025-11-28 02:33:01,394 | INFO     | job summary report
[2025-11-27 21:33:37] 2025-11-28 02:33:01,394 | INFO     | --------------------------------------------------
[2025-11-27 21:33:37] 2025-11-28 02:33:01,394 | INFO     | PanDA job id: 6898271220
[2025-11-27 21:33:37] 2025-11-28 02:33:01,394 | INFO     | task id: 47556161
[2025-11-27 21:33:37] 2025-11-28 02:33:01,394 | INFO     | errors: (none)
[2025-11-27 21:33:37] 2025-11-28 02:33:01,394 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 21:33:37] 2025-11-28 02:33:01,394 | INFO     | pilot state: finished 
[2025-11-27 21:33:37] 2025-11-28 02:33:01,394 | INFO     | transexitcode: 0
[2025-11-27 21:33:37] 2025-11-28 02:33:01,394 | INFO     | exeerrorcode: 0
[2025-11-27 21:33:37] 2025-11-28 02:33:01,395 | INFO     | exeerrordiag: 
[2025-11-27 21:33:37] 2025-11-28 02:33:01,395 | INFO     | exitcode: 0
[2025-11-27 21:33:37] 2025-11-28 02:33:01,395 | INFO     | exitmsg: OK
[2025-11-27 21:33:37] 2025-11-28 02:33:01,395 | INFO     | cpuconsumptiontime: 201365 s
[2025-11-27 21:33:37] 2025-11-28 02:33:01,395 | INFO     | nevents: 1000
[2025-11-27 21:33:37] 2025-11-28 02:33:01,395 | INFO     | neventsw: 0
[2025-11-27 21:33:37] 2025-11-28 02:33:01,395 | INFO     | pid: 3468514
[2025-11-27 21:33:37] 2025-11-28 02:33:01,395 | INFO     | pgrp: 3468514
[2025-11-27 21:33:37] 2025-11-28 02:33:01,395 | INFO     | corecount: 8
[2025-11-27 21:33:37] 2025-11-28 02:33:01,395 | INFO     | event service: False
[2025-11-27 21:33:37] 2025-11-28 02:33:01,395 | INFO     | sizes: {0: 2284314, 11: 2284604, 22: 2284604, 52400: 2333600, 52401: 2333599, 52404: 2342649, 52405: 2342833, 52412: 2343079}
[2025-11-27 21:33:37] 2025-11-28 02:33:01,395 | INFO     | --------------------------------------------------
[2025-11-27 21:33:37] 2025-11-28 02:33:01,395 | INFO     | 
[2025-11-27 21:33:37] 2025-11-28 02:33:01,395 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 21:33:37] 2025-11-28 02:33:01,428 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,428 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,428 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,428 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,429 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,429 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,429 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,429 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,429 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,429 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,429 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,429 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,429 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,429 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,430 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 21:33:37] 2025-11-28 02:33:01,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,430 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 21:33:37] 2025-11-28 02:33:01,430 | INFO     | job 6898271220 has completed (purged errors)
[2025-11-27 21:33:37] 2025-11-28 02:33:01,430 | INFO     | overall cleanup function is called
[2025-11-27 21:33:37] 2025-11-28 02:33:02,447 | INFO     | --- collectZombieJob: --- 10, [3468514]
[2025-11-27 21:33:37] 2025-11-28 02:33:02,447 | INFO     | zombie collector waiting for pid 3468514
[2025-11-27 21:33:37] 2025-11-28 02:33:02,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 21:33:37] 2025-11-28 02:33:02,447 | INFO     | collected zombie processes
[2025-11-27 21:33:37] 2025-11-28 02:33:02,447 | INFO     | will attempt to kill all subprocesses of pid=3468514
[2025-11-27 21:33:37] 2025-11-28 02:33:03,132 | INFO     | process IDs to be killed: [3468514] (in reverse order)
[2025-11-27 21:33:37] 2025-11-28 02:33:03,340 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 21:33:37] 2025-11-28 02:33:03,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 21:33:37] 2025-11-28 02:33:03,394 | INFO     | did not find any defunct processes belonging to 3468514
[2025-11-27 21:33:37] 2025-11-28 02:33:03,498 | INFO     | did not find any defunct processes belonging to 3468514
[2025-11-27 21:33:37] 2025-11-28 02:33:03,504 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 21:33:37] 2025-11-28 02:33:03,504 | INFO     | ready for new job
[2025-11-27 21:33:37] 2025-11-28 02:33:03,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 21:33:37] 2025-11-28 02:33:03,507 | INFO     | ***************************************
[2025-11-27 21:33:37] 2025-11-28 02:33:03,508 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 21:33:37] 2025-11-28 02:33:03,508 | INFO     | ***************************************
[2025-11-27 21:33:37] 2025-11-28 02:33:03,508 | INFO     | 
[2025-11-27 21:33:37] 2025-11-28 02:33:03,513 | INFO     | architecture information:
[2025-11-27 21:33:37] 2025-11-28 02:33:03,514 | INFO     | executing command: cat /etc/os-release
[2025-11-27 21:33:37] 2025-11-28 02:33:03,538 | INFO     | cat /etc/os-release:
[2025-11-27 21:33:37] NAME="CentOS Linux"
[2025-11-27 21:33:37] VERSION="7 (Core)"
[2025-11-27 21:33:37] ID="centos"
[2025-11-27 21:33:37] ID_LIKE="rhel fedora"
[2025-11-27 21:33:37] VERSION_ID="7"
[2025-11-27 21:33:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 21:33:37] ANSI_COLOR="0;31"
[2025-11-27 21:33:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 21:33:37] HOME_URL="https://www.centos.org/"
[2025-11-27 21:33:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 21:33:37] 
[2025-11-27 21:33:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 21:33:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 21:33:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 21:33:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 21:33:37] 
[2025-11-27 21:33:37] 2025-11-28 02:33:03,539 | INFO     | ***************************************
[2025-11-27 21:33:37] 2025-11-28 02:33:04,041 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 21:33:37] 2025-11-28 02:33:04,057 | INFO     | sufficient remaining disk space (67889004544 B)
[2025-11-27 21:33:37] 2025-11-28 02:33:04,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 21:33:37] 2025-11-28 02:33:04,058 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 21:33:37] 2025-11-28 02:33:04,058 | INFO     | update_server=False
[2025-11-27 21:33:37] 2025-11-28 02:33:04,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 21:33:37] 2025-11-28 02:33:04,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 21:33:37] 2025-11-28 02:33:04,177 | INFO     | all data control threads have been joined
[2025-11-27 21:33:37] 2025-11-28 02:33:04,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:33:37] 2025-11-28 02:33:04,630 | INFO     | aborting loop
[2025-11-27 21:33:37] 2025-11-28 02:33:04,814 | INFO     | all payload control threads have been joined
[2025-11-27 21:33:37] 2025-11-28 02:33:04,941 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:33:37] 2025-11-28 02:33:05,063 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:05,076 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:05,118 | INFO     | all job control threads have been joined
[2025-11-27 21:33:37] 2025-11-28 02:33:05,185 | INFO     | [data] control thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:05,203 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:05,283 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:05,483 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:05,492 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:05,613 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:05,636 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:05,657 | INFO     | [job] validate thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:05,820 | INFO     | [payload] control thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:06,069 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:06,116 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:06,129 | INFO     | [job] control thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:06,414 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:33:37] 2025-11-28 02:33:07,419 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:08,950 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:33:37] 2025-11-28 02:33:31,301 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:33:37] 2025-11-28 02:33:31,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591420557120)>', '<ExcThread(monitor, started 140590763198208)>']
[2025-11-27 21:33:37] 2025-11-28 02:33:35,296 | INFO     | PID=3457837 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 21:33:37] 2025-11-28 02:33:35,296 | INFO     | .. there are 72 such processes running
[2025-11-27 21:33:37] 2025-11-28 02:33:35,296 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:33:37] 2025-11-28 02:33:35,296 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:33:37] 2025-11-28 02:33:35,296 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:33:37] 2025-11-28 02:33:35,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:33:37] 2025-11-28 02:33:35,297 | INFO     | [monitor] control thread has ended
[2025-11-27 21:33:37] 2025-11-28 02:33:36,881 | INFO     | all workflow threads have been joined
[2025-11-27 21:33:37] 2025-11-28 02:33:36,881 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:33:37] 2025-11-28 02:33:36,885 | INFO     | traces error code: 0
[2025-11-27 21:33:37] 2025-11-28 02:33:36,885 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:33:37] 2025-11-28 02:33:37,068 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:33:37] 2025-11-28 02:33:37,073 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:33:37] 2025-11-28 02:33:37,077 [wrapper] pilotpid: 3457837
[2025-11-27 21:33:37] 2025-11-28 02:33:37,082 [wrapper] Pilot exit status: 0
[2025-11-27 21:33:37] 2025-11-28 02:33:37,115 [wrapper] pandaids: 6898271220
[2025-11-27 21:33:37] 2025-11-28 02:33:37,273 [wrapper] cleanup supervisor_pilot 3364642 3457838
[2025-11-27 21:33:37] 2025-11-28 02:33:37,278 [wrapper] Test setup, not cleaning
[2025-11-27 21:33:37] 2025-11-28 02:33:37,283 [wrapper] apfmon messages muted
[2025-11-27 21:33:37] 2025-11-28 02:33:37,286 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:33:37] 2025-11-28 02:33:37,291 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:33:37]  *** Error codes and diagnostics ***
[2025-11-27 21:33:37]     "exeErrorCode": 0,
[2025-11-27 21:33:37]     "exeErrorDiag": "",
[2025-11-27 21:33:37]     "pilotErrorCode": 0,
[2025-11-27 21:33:37]     "pilotErrorDiag": "",
[2025-11-27 21:33:37]  *** Listing of results directory ***
[2025-11-27 21:33:37] total 1305872
[2025-11-27 21:33:37] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 09:19 pilot3.tar.gz
[2025-11-27 21:33:37] -rwx------. 1 boincer umatlas     36292 Nov 26 09:47 runpilot2-wrapper.sh
[2025-11-27 21:33:37] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 09:47 queuedata.json
[2025-11-27 21:33:37] -rw-r--r--. 1 boincer umatlas       100 Nov 27 06:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:33:37] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 06:58 run_atlas
[2025-11-27 21:33:37] -rw-r--r--. 1 boincer umatlas       105 Nov 27 06:58 job.xml
[2025-11-27 21:33:37] -rw-r--r--. 2 boincer umatlas 408334789 Nov 27 06:58 EVNT.47483658._002527.pool.root.1
[2025-11-27 21:33:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 06:58 start_atlas.sh
[2025-11-27 21:33:37] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 06:58 shared
[2025-11-27 21:33:37] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 06:58 input.tar.gz
[2025-11-27 21:33:37] -rw-r--r--. 1 boincer umatlas         0 Nov 27 06:58 boinc_lockfile
[2025-11-27 21:33:37] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 06:58 pandaJob.out
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas        57 Nov 27 06:58 setup.sh.local
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas    991572 Nov 27 06:58 agis_schedconf.cvmfs.json
[2025-11-27 21:33:37] drwx------. 5 boincer umatlas      4096 Nov 27 06:58 pilot3
[2025-11-27 21:33:37] -rw-r--r--. 1 boincer umatlas       533 Nov 27 21:24 boinc_task_state.xml
[2025-11-27 21:33:37] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 21:27 init_data.xml
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas 908173846 Nov 27 21:32 HITS.47556161._005099.pool.root.1
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas      1075 Nov 27 21:32 memory_monitor_summary.json
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas   1516240 Nov 27 21:32 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas        95 Nov 27 21:32 pilot_heartbeat.json
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas   2024492 Nov 27 21:32 log.47556161._005099.job.log.tgz.1
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas      8633 Nov 27 21:33 heartbeat.json
[2025-11-27 21:33:37] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 21:33 boinc_mmap_file
[2025-11-27 21:33:37] -rw-r--r--. 1 boincer umatlas        29 Nov 27 21:33 wrapper_checkpoint.txt
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas      4824 Nov 27 21:33 pilotlog.txt
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas   6361458 Nov 27 21:33 log.47556161._005099.job.log.1
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas       353 Nov 27 21:33 output.list
[2025-11-27 21:33:37] -rw-r--r--. 1 boincer umatlas       620 Nov 27 21:33 runtime_log
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas   8407040 Nov 27 21:33 result.tar.gz
[2025-11-27 21:33:37] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 21:33 runtime_log.err
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas       664 Nov 27 21:33 KcwKDm6yVi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGyJKDm5Z8UTo.diag
[2025-11-27 21:33:37] -rw-r--r--. 1 boincer umatlas     21550 Nov 27 21:33 stderr.txt
[2025-11-27 21:33:37] HITS file was successfully produced:
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas 908173846 Nov 27 21:32 shared/HITS.pool.root.1
[2025-11-27 21:33:37]  *** Contents of shared directory: ***
[2025-11-27 21:33:37] total 1294476
[2025-11-27 21:33:37] -rw-r--r--. 2 boincer umatlas 408334789 Nov 27 06:58 ATLAS.root_0
[2025-11-27 21:33:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 06:58 start_atlas.sh
[2025-11-27 21:33:37] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 06:58 input.tar.gz
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas 908173846 Nov 27 21:32 HITS.pool.root.1
[2025-11-27 21:33:37] -rw-------. 1 boincer umatlas   8407040 Nov 27 21:33 result.tar.gz
21:33:38 (3451322): run_atlas exited; CPU time 202782.775506
21:33:38 (3451322): called boinc_finish(0)

</stderr_txt>
]]>

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