Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:05:17 (2577016): wrapper (7.7.26015): starting
06:05:17 (2577016): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 06:05:17] Arguments: --nthreads 8
[2025-11-27 06:05:17] Threads: 8
[2025-11-27 06:05:17] Checking for CVMFS
[2025-11-27 06:05:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 06:05:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 06:05:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 06:05:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 06:05:19] 2.13.3.0 22787 31356 267456 153360 1 953 37522166 40960000 66623 16776704 0 455583984 99.749 277660088 47709 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 06:05:19] CVMFS is ok
[2025-11-27 06:05:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 06:05:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 06:05:19] Further information can be found at the LHC@home message board.
[2025-11-27 06:05:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 06:05:19] Checking for apptainer binary...
[2025-11-27 06:05:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 06:05:19] Running /usr/bin/apptainer --version
[2025-11-27 06:05:19] apptainer version 1.4.4-1.el9
[2025-11-27 06:05:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 06:05:20] c8-6-11.aglt2.org
[2025-11-27 06:05:20] apptainer works
[2025-11-27 06:05:20] Set ATHENA_PROC_NUMBER=8
[2025-11-27 06:05:20] Set ATHENA_CORE_NUMBER=8
[2025-11-27 06:05:20] Starting ATLAS job with PandaID=6898271213
[2025-11-27 06:05:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 14:01:40]  *** The last 200 lines of the pilot log: ***
[2025-11-27 14:01:40] 2025-11-27 19:01:02,266 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 14:01:40] 2025-11-27 19:01:02,266 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 14:01:40] 2025-11-27 19:01:02,300 | INFO     | fitting pss+swap vs Time
[2025-11-27 14:01:40] 2025-11-27 19:01:02,300 | INFO     | sum of square deviations: 30974213449.03433
[2025-11-27 14:01:40] 2025-11-27 19:01:02,350 | INFO     | sum of deviations: 443749305456.7243
[2025-11-27 14:01:40] 2025-11-27 19:01:02,350 | INFO     | mean x: 1764255894.3965516
[2025-11-27 14:01:40] 2025-11-27 19:01:02,350 | INFO     | mean y: 2824671.202586207
[2025-11-27 14:01:40] 2025-11-27 19:01:02,350 | INFO     | intersect: -25272629992.870876
[2025-11-27 14:01:40] 2025-11-27 19:01:02,351 | INFO     | chi2: 10.05939272054739
[2025-11-27 14:01:40] 2025-11-27 19:01:02,351 | INFO     | sum of square deviations: 29983698494.97163
[2025-11-27 14:01:40] 2025-11-27 19:01:02,353 | INFO     | sum of deviations: 607661977036.3961
[2025-11-27 14:01:40] 2025-11-27 19:01:02,354 | INFO     | mean x: 1764255741.9063182
[2025-11-27 14:01:40] 2025-11-27 19:01:02,354 | INFO     | mean y: 2849922.311546841
[2025-11-27 14:01:40] 2025-11-27 19:01:02,354 | INFO     | intersect: -35752283231.2718
[2025-11-27 14:01:40] 2025-11-27 19:01:02,354 | INFO     | chi2: 6.524657651740611
[2025-11-27 14:01:40] 2025-11-27 19:01:02,354 | INFO     | current chi2=6.524657651740611 (change=35.138652670222356 %)
[2025-11-27 14:01:40] 2025-11-27 19:01:02,354 | INFO     | sum of square deviations: 29014532778.31936
[2025-11-27 14:01:40] 2025-11-27 19:01:02,361 | INFO     | sum of deviations: 656468686241.165
[2025-11-27 14:01:40] 2025-11-27 19:01:02,361 | INFO     | mean x: 1764255589.4162996
[2025-11-27 14:01:40] 2025-11-27 19:01:02,361 | INFO     | mean y: 2857573.491189427
[2025-11-27 14:01:40] 2025-11-27 19:01:02,361 | INFO     | intersect: -39914330058.87974
[2025-11-27 14:01:40] 2025-11-27 19:01:02,361 | INFO     | chi2: 5.979614014664613
[2025-11-27 14:01:40] 2025-11-27 19:01:02,361 | INFO     | current chi2=5.979614014664613 (change=8.353597478491368 %)
[2025-11-27 14:01:40] 2025-11-27 19:01:02,361 | INFO     | right removable region: 453
[2025-11-27 14:01:40] 2025-11-27 19:01:02,362 | INFO     | sum of square deviations: 29983444734.971664
[2025-11-27 14:01:40] 2025-11-27 19:01:02,383 | INFO     | sum of deviations: 267827576342.64233
[2025-11-27 14:01:40] 2025-11-27 19:01:02,383 | INFO     | mean x: 1764256046.9063182
[2025-11-27 14:01:40] 2025-11-27 19:01:02,383 | INFO     | mean y: 2851734.4335511983
[2025-11-27 14:01:40] 2025-11-27 19:01:02,383 | INFO     | intersect: -15756392250.619417
[2025-11-27 14:01:40] 2025-11-27 19:01:02,383 | INFO     | chi2: 6.09956988213475
[2025-11-27 14:01:40] 2025-11-27 19:01:02,383 | INFO     | current chi2=6.09956988213475 (change=39.36443231134894 %)
[2025-11-27 14:01:40] 2025-11-27 19:01:02,384 | INFO     | sum of square deviations: 29014025258.31935
[2025-11-27 14:01:40] 2025-11-27 19:01:02,395 | INFO     | sum of deviations: 161018365029.26465
[2025-11-27 14:01:40] 2025-11-27 19:01:02,395 | INFO     | mean x: 1764256199.4162996
[2025-11-27 14:01:40] 2025-11-27 19:01:02,396 | INFO     | mean y: 2868480.585903084
[2025-11-27 14:01:40] 2025-11-27 19:01:02,396 | INFO     | intersect: -9788177270.341114
[2025-11-27 14:01:40] 2025-11-27 19:01:02,396 | INFO     | chi2: 4.305188151230356
[2025-11-27 14:01:40] 2025-11-27 19:01:02,396 | INFO     | current chi2=4.305188151230356 (change=29.418168257404897 %)
[2025-11-27 14:01:40] 2025-11-27 19:01:02,396 | INFO     | sum of square deviations: 28065916194.436436
[2025-11-27 14:01:40] 2025-11-27 19:01:02,399 | INFO     | sum of deviations: 136689252286.7971
[2025-11-27 14:01:40] 2025-11-27 19:01:02,399 | INFO     | mean x: 1764256351.9109132
[2025-11-27 14:01:40] 2025-11-27 19:01:02,399 | INFO     | mean y: 2872390.469933185
[2025-11-27 14:01:40] 2025-11-27 19:01:02,399 | INFO     | intersect: -8589574045.77859
[2025-11-27 14:01:40] 2025-11-27 19:01:02,399 | INFO     | chi2: 4.270372031373743
[2025-11-27 14:01:40] 2025-11-27 19:01:02,399 | INFO     | current chi2=4.270372031373743 (change=0.8087014697990124 %)
[2025-11-27 14:01:40] 2025-11-27 19:01:02,399 | INFO     | left removable region: 30
[2025-11-27 14:01:40] 2025-11-27 19:01:02,400 | INFO     | sum of square deviations: 23467212546.42549
[2025-11-27 14:01:40] 2025-11-27 19:01:02,402 | INFO     | sum of deviations: 296512985872.92175
[2025-11-27 14:01:40] 2025-11-27 19:01:02,402 | INFO     | mean x: 1764256473.9219859
[2025-11-27 14:01:40] 2025-11-27 19:01:02,402 | INFO     | mean y: 2916152.6643026005
[2025-11-27 14:01:40] 2025-11-27 19:01:02,402 | INFO     | intersect: -22288821900.729794
[2025-11-27 14:01:40] 2025-11-27 19:01:02,403 | INFO     | chi2: 0.0302403264958195
[2025-11-27 14:01:40] 2025-11-27 19:01:02,403 | INFO     | current memory leak: 12.64 B/s (using 423 data points, chi2=0.03)
[2025-11-27 14:01:40] 2025-11-27 19:01:02,403 | INFO     | could have reported an average CPU frequency of 3797 MHz (19 samples)
[2025-11-27 14:01:40] 2025-11-27 19:01:02,403 | INFO     | ..............................
[2025-11-27 14:01:40] 2025-11-27 19:01:02,403 | INFO     | . Timing measurements:
[2025-11-27 14:01:40] 2025-11-27 19:01:02,403 | INFO     | . get job = 0 s
[2025-11-27 14:01:40] 2025-11-27 19:01:02,403 | INFO     | . initial setup = 4 s
[2025-11-27 14:01:40] 2025-11-27 19:01:02,404 | INFO     | . payload setup = 51 s
[2025-11-27 14:01:40] 2025-11-27 19:01:02,404 | INFO     | . stage-in = 0 s
[2025-11-27 14:01:40] 2025-11-27 19:01:02,404 | INFO     | . payload execution = 28306 s
[2025-11-27 14:01:40] 2025-11-27 19:01:02,404 | INFO     | . stage-out = 3 s
[2025-11-27 14:01:40] 2025-11-27 19:01:02,404 | INFO     | . log creation = 0 s
[2025-11-27 14:01:40] 2025-11-27 19:01:02,404 | INFO     | ..............................
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | 
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | job summary report
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | --------------------------------------------------
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | PanDA job id: 6898271213
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | task id: 47556161
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | errors: (none)
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | pilot state: finished 
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | transexitcode: 0
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | exeerrorcode: 0
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | exeerrordiag: 
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | exitcode: 0
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | exitmsg: OK
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | cpuconsumptiontime: 135157 s
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | nevents: 1000
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | neventsw: 0
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | pid: 2629866
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | pgrp: 2629866
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | corecount: 8
[2025-11-27 14:01:40] 2025-11-27 19:01:02,457 | INFO     | event service: False
[2025-11-27 14:01:40] 2025-11-27 19:01:02,458 | INFO     | sizes: {0: 2284088, 1: 2284172, 2: 2284371, 13: 2284371, 24: 2284427, 35: 2284455, 43: 2284873, 46: 2284901, 28362: 2322695, 28366: 2331689, 28368: 2331745, 28380:
[2025-11-27 14:01:40] 2025-11-27 19:01:02,458 | INFO     | --------------------------------------------------
[2025-11-27 14:01:40] 2025-11-27 19:01:02,458 | INFO     | 
[2025-11-27 14:01:40] 2025-11-27 19:01:02,458 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 14:01:40] 2025-11-27 19:01:02,699 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,699 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,699 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,699 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,699 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,699 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,699 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,699 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,699 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,699 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,700 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,700 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,700 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,700 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,700 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,700 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 14:01:40] 2025-11-27 19:01:02,700 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,700 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 14:01:40] 2025-11-27 19:01:02,700 | INFO     | job 6898271213 has completed (purged errors)
[2025-11-27 14:01:40] 2025-11-27 19:01:02,700 | INFO     | overall cleanup function is called
[2025-11-27 14:01:40] 2025-11-27 19:01:03,714 | INFO     | --- collectZombieJob: --- 10, [2629866]
[2025-11-27 14:01:40] 2025-11-27 19:01:03,714 | INFO     | zombie collector waiting for pid 2629866
[2025-11-27 14:01:40] 2025-11-27 19:01:03,714 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 14:01:40] 2025-11-27 19:01:03,714 | INFO     | collected zombie processes
[2025-11-27 14:01:40] 2025-11-27 19:01:03,714 | INFO     | will attempt to kill all subprocesses of pid=2629866
[2025-11-27 14:01:40] 2025-11-27 19:01:04,631 | INFO     | process IDs to be killed: [2629866] (in reverse order)
[2025-11-27 14:01:40] 2025-11-27 19:01:04,831 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 14:01:40] 2025-11-27 19:01:04,832 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 14:01:40] 2025-11-27 19:01:04,877 | INFO     | did not find any defunct processes belonging to 2629866
[2025-11-27 14:01:40] 2025-11-27 19:01:04,911 | INFO     | did not find any defunct processes belonging to 2629866
[2025-11-27 14:01:40] 2025-11-27 19:01:04,912 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 14:01:40] 2025-11-27 19:01:04,912 | INFO     | ready for new job
[2025-11-27 14:01:40] 2025-11-27 19:01:04,912 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 14:01:40] 2025-11-27 19:01:04,914 | INFO     | ***************************************
[2025-11-27 14:01:40] 2025-11-27 19:01:04,914 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 14:01:40] 2025-11-27 19:01:04,914 | INFO     | ***************************************
[2025-11-27 14:01:40] 2025-11-27 19:01:04,914 | INFO     | 
[2025-11-27 14:01:40] 2025-11-27 19:01:04,919 | INFO     | architecture information:
[2025-11-27 14:01:40] 2025-11-27 19:01:04,919 | INFO     | executing command: cat /etc/os-release
[2025-11-27 14:01:40] 2025-11-27 19:01:05,118 | INFO     | cat /etc/os-release:
[2025-11-27 14:01:40] NAME="CentOS Linux"
[2025-11-27 14:01:40] VERSION="7 (Core)"
[2025-11-27 14:01:40] ID="centos"
[2025-11-27 14:01:40] ID_LIKE="rhel fedora"
[2025-11-27 14:01:40] VERSION_ID="7"
[2025-11-27 14:01:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 14:01:40] ANSI_COLOR="0;31"
[2025-11-27 14:01:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 14:01:40] HOME_URL="https://www.centos.org/"
[2025-11-27 14:01:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 14:01:40] 
[2025-11-27 14:01:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 14:01:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 14:01:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 14:01:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 14:01:40] 
[2025-11-27 14:01:40] 2025-11-27 19:01:05,118 | INFO     | ***************************************
[2025-11-27 14:01:40] 2025-11-27 19:01:05,621 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 14:01:40] 2025-11-27 19:01:05,671 | INFO     | sufficient remaining disk space (159665618944 B)
[2025-11-27 14:01:40] 2025-11-27 19:01:05,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 14:01:40] 2025-11-27 19:01:05,672 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 14:01:40] 2025-11-27 19:01:05,672 | INFO     | update_server=False
[2025-11-27 14:01:40] 2025-11-27 19:01:05,672 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 14:01:40] 2025-11-27 19:01:05,673 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:01:40] 2025-11-27 19:01:05,673 | INFO     | aborting loop
[2025-11-27 14:01:40] 2025-11-27 19:01:05,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 14:01:40] 2025-11-27 19:01:05,945 | INFO     | all job control threads have been joined
[2025-11-27 14:01:40] 2025-11-27 19:01:06,397 | INFO     | all data control threads have been joined
[2025-11-27 14:01:40] 2025-11-27 19:01:06,679 | INFO     | [job] retrieve thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:06,679 | INFO     | [job] job monitor thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:06,687 | INFO     | all payload control threads have been joined
[2025-11-27 14:01:40] 2025-11-27 19:01:06,693 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:06,722 | INFO     | [payload] failed_post thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:06,950 | INFO     | [job] control thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:06,994 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:07,081 | INFO     | [job] validate thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:07,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 14:01:40] 2025-11-27 19:01:07,140 | INFO     | [payload] validate_post thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:07,403 | INFO     | [data] control thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:07,475 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:01:40] 2025-11-27 19:01:07,693 | INFO     | [payload] control thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:08,088 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:08,122 | INFO     | [data] copytool_in thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:08,174 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:08,481 | INFO     | [job] queue monitor thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:09,117 | INFO     | [data] copytool_out thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:09,868 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 14:01:40] 2025-11-27 19:01:32,611 | INFO     | [monitor] cgroup control has ended
[2025-11-27 14:01:40] 2025-11-27 19:01:34,455 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140225484662592)>', '<ExcThread(monitor, started 140224776632064)>']
[2025-11-27 14:01:40] 2025-11-27 19:01:34,538 | INFO     | PID=2601132 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 14:01:40] 2025-11-27 19:01:34,539 | INFO     | .. there are 86 such processes running
[2025-11-27 14:01:40] 2025-11-27 19:01:34,539 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 14:01:40] 2025-11-27 19:01:34,539 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 14:01:40] 2025-11-27 19:01:34,539 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 14:01:40] 2025-11-27 19:01:34,539 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 14:01:40] 2025-11-27 19:01:34,539 | INFO     | [monitor] control thread has ended
[2025-11-27 14:01:40] 2025-11-27 19:01:39,481 | INFO     | all workflow threads have been joined
[2025-11-27 14:01:40] 2025-11-27 19:01:39,481 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 14:01:40] 2025-11-27 19:01:39,481 | INFO     | traces error code: 0
[2025-11-27 14:01:40] 2025-11-27 19:01:39,481 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 14:01:40] 2025-11-27 19:01:39,623 [wrapper] ==== pilot stdout END ====
[2025-11-27 14:01:40] 2025-11-27 19:01:39,642 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 14:01:40] 2025-11-27 19:01:39,651 [wrapper] pilotpid: 2601132
[2025-11-27 14:01:40] 2025-11-27 19:01:39,654 [wrapper] Pilot exit status: 0
[2025-11-27 14:01:40] 2025-11-27 19:01:39,683 [wrapper] pandaids: 6898271213
[2025-11-27 14:01:40] 2025-11-27 19:01:39,839 [wrapper] cleanup supervisor_pilot 1967340 2601133
[2025-11-27 14:01:40] 2025-11-27 19:01:39,843 [wrapper] Test setup, not cleaning
[2025-11-27 14:01:40] 2025-11-27 19:01:39,853 [wrapper] apfmon messages muted
[2025-11-27 14:01:40] 2025-11-27 19:01:39,869 [wrapper] ==== wrapper stdout END ====
[2025-11-27 14:01:40] 2025-11-27 19:01:39,881 [wrapper] ==== wrapper stderr END ====
[2025-11-27 14:01:40]  *** Error codes and diagnostics ***
[2025-11-27 14:01:40]     "exeErrorCode": 0,
[2025-11-27 14:01:40]     "exeErrorDiag": "",
[2025-11-27 14:01:40]     "pilotErrorCode": 0,
[2025-11-27 14:01:40]     "pilotErrorDiag": "",
[2025-11-27 14:01:40]  *** Listing of results directory ***
[2025-11-27 14:01:40] total 1304864
[2025-11-27 14:01:40] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 09:19 pilot3.tar.gz
[2025-11-27 14:01:40] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 09:47 queuedata.json
[2025-11-27 14:01:40] -rwx------. 1 boincer umatlas     36292 Nov 26 09:49 runpilot2-wrapper.sh
[2025-11-27 14:01:40] -rw-r--r--. 1 boincer umatlas       100 Nov 27 06:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 14:01:40] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 06:05 run_atlas
[2025-11-27 14:01:40] -rw-r--r--. 1 boincer umatlas       105 Nov 27 06:05 job.xml
[2025-11-27 14:01:40] -rw-r--r--. 2 boincer umatlas 408334789 Nov 27 06:05 EVNT.47483658._002527.pool.root.1
[2025-11-27 14:01:40] -rw-r--r--. 2 boincer umatlas    590101 Nov 27 06:05 input.tar.gz
[2025-11-27 14:01:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 06:05 start_atlas.sh
[2025-11-27 14:01:40] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 06:05 shared
[2025-11-27 14:01:40] -rw-r--r--. 1 boincer umatlas         0 Nov 27 06:05 boinc_lockfile
[2025-11-27 14:01:40] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 06:05 pandaJob.out
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas        57 Nov 27 06:05 setup.sh.local
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas    991564 Nov 27 06:06 agis_schedconf.cvmfs.json
[2025-11-27 14:01:40] drwx------. 5 boincer umatlas      4096 Nov 27 06:06 pilot3
[2025-11-27 14:01:40] -rw-r--r--. 1 boincer umatlas       533 Nov 27 13:50 boinc_task_state.xml
[2025-11-27 14:01:40] -rw-r--r--. 1 boincer umatlas      7174 Nov 27 13:55 init_data.xml
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas 913563061 Nov 27 14:00 HITS.47556161._005092.pool.root.1
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas      1058 Nov 27 14:00 memory_monitor_summary.json
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas   1516240 Nov 27 14:00 agis_ddmendpoints.agis.ALL.json
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas   1711163 Nov 27 14:00 log.47556161._005092.job.log.tgz.1
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas      8588 Nov 27 14:01 heartbeat.json
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas        95 Nov 27 14:01 pilot_heartbeat.json
[2025-11-27 14:01:40] -rw-r--r--. 1 boincer umatlas        29 Nov 27 14:01 wrapper_checkpoint.txt
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas      4825 Nov 27 14:01 pilotlog.txt
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas   3466924 Nov 27 14:01 log.47556161._005092.job.log.1
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas       353 Nov 27 14:01 output.list
[2025-11-27 14:01:40] -rw-r--r--. 1 boincer umatlas       620 Nov 27 14:01 runtime_log
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas   5201920 Nov 27 14:01 result.tar.gz
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas       659 Nov 27 14:01 yuWNDm30Vi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmR2MKDmnxNAqm.diag
[2025-11-27 14:01:40] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 14:01 runtime_log.err
[2025-11-27 14:01:40] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 14:01 boinc_mmap_file
[2025-11-27 14:01:40] -rw-r--r--. 1 boincer umatlas     21168 Nov 27 14:01 stderr.txt
[2025-11-27 14:01:40] HITS file was successfully produced:
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas 913563061 Nov 27 14:00 shared/HITS.pool.root.1
[2025-11-27 14:01:40]  *** Contents of shared directory: ***
[2025-11-27 14:01:40] total 1296604
[2025-11-27 14:01:40] -rw-r--r--. 2 boincer umatlas 408334789 Nov 27 06:05 ATLAS.root_0
[2025-11-27 14:01:40] -rw-r--r--. 2 boincer umatlas    590101 Nov 27 06:05 input.tar.gz
[2025-11-27 14:01:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 06:05 start_atlas.sh
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas 913563061 Nov 27 14:00 HITS.pool.root.1
[2025-11-27 14:01:40] -rw-------. 1 boincer umatlas   5201920 Nov 27 14:01 result.tar.gz
14:01:42 (2577016): run_atlas exited; CPU time 135647.962930
14:01:42 (2577016): called boinc_finish(0)

</stderr_txt>
]]>

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