Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:03:19 (97665): wrapper (7.7.26015): starting
20:03:19 (97665): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 20:03:19] Arguments: --nthreads 3
[2025-11-27 20:03:19] Threads: 3
[2025-11-27 20:03:19] Checking for CVMFS
[2025-11-27 20:03:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 20:03:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 20:03:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 20:03:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 20:03:19] 2.9.2.0 3650771 4753 83708 153379 3 81 7580447 36864000 0 130560 2 1767856 99.980 183390 216 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 20:03:19] CVMFS is ok
[2025-11-27 20:03:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 20:03:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 20:03:19] Further information can be found at the LHC@home message board.
[2025-11-27 20:03:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 20:03:19] Checking for apptainer binary...
[2025-11-27 20:03:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 20:03:19] Running /usr/bin/apptainer --version
[2025-11-27 20:03:19] apptainer version 1.4.1-1.1
[2025-11-27 20:03:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 20:03:19] thA330a
[2025-11-27 20:03:19] apptainer works
[2025-11-27 20:03:19] Set ATHENA_PROC_NUMBER=3
[2025-11-27 20:03:19] Set ATHENA_CORE_NUMBER=3
[2025-11-27 20:03:19] Starting ATLAS job with PandaID=6898271398
[2025-11-27 20:03:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 03:53:06]  *** The last 200 lines of the pilot log: ***
[2025-11-28 03:53:06] 2025-11-28 02:52:05,870 | INFO     | [job] queue monitor thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:06,205 | INFO     | [job] job monitor thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:06,213 | INFO     | all job control threads have been joined
[2025-11-28 03:53:06] 2025-11-28 02:52:06,392 | INFO     | [payload] validate_post thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:06,571 | INFO     | [payload] control thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:06,733 | INFO     | [data] copytool_in thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:06,823 | INFO     | [data] control thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:07,178 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:07,201 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:07,219 | INFO     | [job] control thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:07,275 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:07,315 | INFO     | [job] validate thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:07,381 | INFO     | [payload] failed_post thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:07,594 | INFO     | [data] copytool_out thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:09,052 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:15,429 | INFO     | job.realtimelogging is not enabled
[2025-11-28 03:53:06] 2025-11-28 02:52:16,435 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 03:53:06] 2025-11-28 02:52:35,223 | INFO     | PID=101385 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-28 03:53:06] 2025-11-28 02:52:35,223 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 03:53:06] 2025-11-28 02:52:35,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 03:53:06] 2025-11-28 02:52:35,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 03:53:06] 2025-11-28 02:52:59,018 | INFO     | [monitor] cgroup control has ended
[2025-11-28 03:53:06] 2025-11-28 02:53:00,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380375140160)>', '<ExcThread(monitor, started 140380024579840)>']
[2025-11-28 03:53:06] 2025-11-28 02:53:01,362 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 03:53:06] 2025-11-28 02:53:01,362 | INFO     | [monitor] control thread has ended
[2025-11-28 03:53:06] 2025-11-28 02:53:06,003 | INFO     | all workflow threads have been joined
[2025-11-28 03:53:06] 2025-11-28 02:53:06,003 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 03:53:06] 2025-11-28 02:53:06,003 | INFO     | traces error code: 0
[2025-11-28 03:53:06] 2025-11-28 02:53:06,003 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 03:53:06] 2025-11-28 02:53:06,054 [wrapper] ==== pilot stdout END ====
[2025-11-28 03:53:06] 2025-11-28 02:53:06,056 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 03:53:06] 2025-11-28 02:53:06,059 [wrapper] pilotpid: 101385
[2025-11-28 03:53:06] 2025-11-28 02:53:06,061 [wrapper] Pilot exit status: 0
[2025-11-28 03:53:06] 2025-11-28 02:53:06,068 [wrapper] pandaids: 6898271398
[2025-11-28 03:53:06] 2025-11-28 02:53:06,085 [wrapper] cleanup supervisor_pilot  157618 101386
[2025-11-28 03:53:06] 2025-11-28 02:53:06,087 [wrapper] Test setup, not cleaning
[2025-11-28 03:53:06] 2025-11-28 02:53:06,090 [wrapper] apfmon messages muted
[2025-11-28 03:53:06] 2025-11-28 02:53:06,092 [wrapper] ==== wrapper stdout END ====
[2025-11-28 03:53:06] 2025-11-28 02:53:06,094 [wrapper] ==== wrapper stderr END ====
[2025-11-28 03:53:06]  *** Error codes and diagnostics ***
[2025-11-28 03:53:06]     "exeErrorCode": 0,
[2025-11-28 03:53:06]     "exeErrorDiag": "",
[2025-11-28 03:53:06]     "pilotErrorCode": 0,
[2025-11-28 03:53:06]     "pilotErrorDiag": "",
[2025-11-28 03:53:06]  *** Listing of results directory ***
[2025-11-28 03:53:06] total 1310112
[2025-11-28 03:53:06] -rw-r--r-- 1 boinc boinc      5112 Nov 26 16:05 queuedata.json
[2025-11-28 03:53:06] -rw-r--r-- 1 boinc boinc    576529 Nov 26 16:05 pilot3.tar.gz
[2025-11-28 03:53:06] -rwx------ 1 boinc boinc     36292 Nov 26 16:06 runpilot2-wrapper.sh
[2025-11-28 03:53:06] -rw-r--r-- 1 boinc boinc       100 Nov 27 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 03:53:06] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 20:03 run_atlas
[2025-11-28 03:53:06] -rw-r--r-- 1 boinc boinc       105 Nov 27 20:03 job.xml
[2025-11-28 03:53:06] -rw-r--r-- 2 boinc boinc 409485283 Nov 27 20:03 EVNT.47483658._002533.pool.root.1
[2025-11-28 03:53:06] -rw-r--r-- 2 boinc boinc    590110 Nov 27 20:03 input.tar.gz
[2025-11-28 03:53:06] -rw-r--r-- 2 boinc boinc     15847 Nov 27 20:03 start_atlas.sh
[2025-11-28 03:53:06] drwxrwx--x 2 boinc boinc      4096 Nov 27 20:03 shared
[2025-11-28 03:53:06] -rw-r--r-- 1 boinc boinc         0 Nov 27 20:03 boinc_setup_complete
[2025-11-28 03:53:06] -rw-r--r-- 1 boinc boinc      6441 Nov 27 20:03 init_data.xml
[2025-11-28 03:53:06] -rw-r--r-- 1 boinc boinc         0 Nov 27 20:03 boinc_lockfile
[2025-11-28 03:53:06] -rw-r--r-- 1 boinc boinc      2786 Nov 27 20:03 pandaJob.out
[2025-11-28 03:53:06] -rw------- 1 boinc boinc    991223 Nov 27 20:03 agis_schedconf.cvmfs.json
[2025-11-28 03:53:06] drwx------ 5 boinc boinc      4096 Nov 27 20:03 pilot3
[2025-11-28 03:53:06] -rw-r--r-- 1 boinc boinc       532 Nov 28 03:49 boinc_task_state.xml
[2025-11-28 03:53:06] -rw------- 1 boinc boinc 917933062 Nov 28 03:51 HITS.47556161._005159.pool.root.1
[2025-11-28 03:53:06] -rw------- 1 boinc boinc        95 Nov 28 03:51 pilot_heartbeat.json
[2025-11-28 03:53:06] -rw------- 1 boinc boinc      1024 Nov 28 03:51 memory_monitor_summary.json
[2025-11-28 03:53:06] -rw------- 1 boinc boinc   1516240 Nov 28 03:51 agis_ddmendpoints.agis.ALL.json
[2025-11-28 03:53:06] -rw------- 1 boinc boinc   1169280 Nov 28 03:51 log.47556161._005159.job.log.tgz.1
[2025-11-28 03:53:06] -rw------- 1 boinc boinc      8568 Nov 28 03:52 heartbeat.json
[2025-11-28 03:53:06] -rw-r--r-- 1 boinc boinc      8192 Nov 28 03:52 boinc_mmap_file
[2025-11-28 03:53:06] -rw-r--r-- 1 boinc boinc        28 Nov 28 03:52 wrapper_checkpoint.txt
[2025-11-28 03:53:06] -rw------- 1 boinc boinc      5009 Nov 28 03:53 pilotlog.txt
[2025-11-28 03:53:06] -rw------- 1 boinc boinc   3953050 Nov 28 03:53 log.47556161._005159.job.log.1
[2025-11-28 03:53:06] -rw------- 1 boinc boinc       353 Nov 28 03:53 output.list
[2025-11-28 03:53:06] -rw-r--r-- 1 boinc boinc       620 Nov 28 03:53 runtime_log
[2025-11-28 03:53:06] -rw------- 1 boinc boinc   5140480 Nov 28 03:53 result.tar.gz
[2025-11-28 03:53:06] -rw-r--r-- 1 boinc boinc      8903 Nov 28 03:53 runtime_log.err
[2025-11-28 03:53:06] -rw------- 1 boinc boinc       666 Nov 28 03:53 90FLDmzGWi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvyJKDma0I1Nm.diag
[2025-11-28 03:53:06] -rw-r--r-- 1 boinc boinc      6392 Nov 28 03:53 stderr.txt
[2025-11-28 03:53:06] HITS file was successfully produced:
[2025-11-28 03:53:06] -rw------- 1 boinc boinc 917933062 Nov 28 03:51 shared/HITS.pool.root.1
[2025-11-28 03:53:06]  *** Contents of shared directory: ***
[2025-11-28 03:53:06] total 1301928
[2025-11-28 03:53:06] -rw-r--r-- 2 boinc boinc 409485283 Nov 27 20:03 ATLAS.root_0
[2025-11-28 03:53:06] -rw-r--r-- 2 boinc boinc    590110 Nov 27 20:03 input.tar.gz
[2025-11-28 03:53:06] -rw-r--r-- 2 boinc boinc     15847 Nov 27 20:03 start_atlas.sh
[2025-11-28 03:53:06] -rw------- 1 boinc boinc 917933062 Nov 28 03:51 HITS.pool.root.1
[2025-11-28 03:53:06] -rw------- 1 boinc boinc   5140480 Nov 28 03:53 result.tar.gz
03:53:07 (97665): run_atlas exited; CPU time 83082.479265
03:53:07 (97665): called boinc_finish(0)

</stderr_txt>
]]>

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