Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:58:56 (4170143): wrapper (7.7.26015): starting
05:58:56 (4170143): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 05:58:56] Arguments: --nthreads 8
[2025-11-27 05:58:56] Threads: 8
[2025-11-27 05:58:56] Checking for CVMFS
[2025-11-27 05:58:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:58:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:58:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:58:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:58:57] 2.13.2.0 8445 36690 201464 153360 0 349 28468973 40960000 20667 16776704 0 81255868 99.790 41092766 35848 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 05:58:57] CVMFS is ok
[2025-11-27 05:58:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:58:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:58:57] Further information can be found at the LHC@home message board.
[2025-11-27 05:58:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:58:57] Checking for apptainer binary...
[2025-11-27 05:58:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:58:57] Running /usr/bin/apptainer --version
[2025-11-27 05:58:57] apptainer version 1.4.4-1.el9
[2025-11-27 05:58:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:58:57] c-212-2.aglt2.org
[2025-11-27 05:58:57] apptainer works
[2025-11-27 05:58:57] Set ATHENA_PROC_NUMBER=8
[2025-11-27 05:58:57] Set ATHENA_CORE_NUMBER=8
[2025-11-27 05:58:57] Starting ATLAS job with PandaID=6898271378
[2025-11-27 05:58:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:14:35]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:14:35] 2025-11-27 23:13:40,649 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 18:14:35] 2025-11-27 23:13:40,660 | INFO     | fitting pss+swap vs Time
[2025-11-27 18:14:35] 2025-11-27 23:13:40,661 | INFO     | sum of square deviations: 116704634732.57758
[2025-11-27 18:14:35] 2025-11-27 23:13:40,672 | INFO     | sum of deviations: 1266633441662.2068
[2025-11-27 18:14:35] 2025-11-27 23:13:40,672 | INFO     | mean x: 1764263180.2119114
[2025-11-27 18:14:35] 2025-11-27 23:13:40,672 | INFO     | mean y: 2851211.1620498616
[2025-11-27 18:14:35] 2025-11-27 23:13:40,672 | INFO     | intersect: -19145272160.89049
[2025-11-27 18:14:35] 2025-11-27 23:13:40,673 | INFO     | chi2: 8.27055213689118
[2025-11-27 18:14:35] 2025-11-27 23:13:40,673 | INFO     | sum of square deviations: 114296923097.5258
[2025-11-27 18:14:35] 2025-11-27 23:13:40,684 | INFO     | sum of deviations: 1452308577203.2695
[2025-11-27 18:14:35] 2025-11-27 23:13:40,684 | INFO     | mean x: 1764263027.7168758
[2025-11-27 18:14:35] 2025-11-27 23:13:40,684 | INFO     | mean y: 2862961.316596932
[2025-11-27 18:14:35] 2025-11-27 23:13:40,684 | INFO     | intersect: -22414663759.06188
[2025-11-27 18:14:35] 2025-11-27 23:13:40,685 | INFO     | chi2: 6.201588957255923
[2025-11-27 18:14:35] 2025-11-27 23:13:40,685 | INFO     | current chi2=6.201588957255923 (change=25.016022454009462 %)
[2025-11-27 18:14:35] 2025-11-27 23:13:40,685 | INFO     | sum of square deviations: 111922560924.9384
[2025-11-27 18:14:35] 2025-11-27 23:13:40,695 | INFO     | sum of deviations: 1515495313667.8723
[2025-11-27 18:14:35] 2025-11-27 23:13:40,695 | INFO     | mean x: 1764262875.22191
[2025-11-27 18:14:35] 2025-11-27 23:13:40,695 | INFO     | mean y: 2867009.4185393257
[2025-11-27 18:14:35] 2025-11-27 23:13:40,695 | INFO     | intersect: -23886258626.923595
[2025-11-27 18:14:35] 2025-11-27 23:13:40,696 | INFO     | chi2: 5.788654401898758
[2025-11-27 18:14:35] 2025-11-27 23:13:40,696 | INFO     | current chi2=5.788654401898758 (change=6.658528293366282 %)
[2025-11-27 18:14:35] 2025-11-27 23:13:40,696 | INFO     | right removable region: 711
[2025-11-27 18:14:35] 2025-11-27 23:13:40,696 | INFO     | sum of square deviations: 114296609557.52579
[2025-11-27 18:14:35] 2025-11-27 23:13:40,706 | INFO     | sum of deviations: 1008024128321.3878
[2025-11-27 18:14:35] 2025-11-27 23:13:40,706 | INFO     | mean x: 1764263332.7168758
[2025-11-27 18:14:35] 2025-11-27 23:13:40,706 | INFO     | mean y: 2867586.637377964
[2025-11-27 18:14:35] 2025-11-27 23:13:40,706 | INFO     | intersect: -15556824122.295
[2025-11-27 18:14:35] 2025-11-27 23:13:40,707 | INFO     | chi2: 4.8263490582051904
[2025-11-27 18:14:35] 2025-11-27 23:13:40,707 | INFO     | current chi2=4.8263490582051904 (change=41.64417346845518 %)
[2025-11-27 18:14:35] 2025-11-27 23:13:40,708 | INFO     | sum of square deviations: 111921977338.38077
[2025-11-27 18:14:35] 2025-11-27 23:13:40,717 | INFO     | sum of deviations: 808092850655.9874
[2025-11-27 18:14:35] 2025-11-27 23:13:40,718 | INFO     | mean x: 1764263485.2205057
[2025-11-27 18:14:35] 2025-11-27 23:13:40,718 | INFO     | mean y: 2880408.5351123596
[2025-11-27 18:14:35] 2025-11-27 23:13:40,718 | INFO     | intersect: -12735356915.218842
[2025-11-27 18:14:35] 2025-11-27 23:13:40,718 | INFO     | chi2: 2.6175140082281154
[2025-11-27 18:14:35] 2025-11-27 23:13:40,718 | INFO     | current chi2=2.6175140082281154 (change=45.76616865748394 %)
[2025-11-27 18:14:35] 2025-11-27 23:13:40,719 | INFO     | sum of square deviations: 109580679301.42285
[2025-11-27 18:14:35] 2025-11-27 23:13:40,728 | INFO     | sum of deviations: 762848602968.0138
[2025-11-27 18:14:35] 2025-11-27 23:13:40,729 | INFO     | mean x: 1764263637.7171147
[2025-11-27 18:14:35] 2025-11-27 23:13:40,729 | INFO     | mean y: 2883353.0650636493
[2025-11-27 18:14:35] 2025-11-27 23:13:40,729 | INFO     | intersect: -12279081495.845045
[2025-11-27 18:14:35] 2025-11-27 23:13:40,729 | INFO     | chi2: 2.5726538045282625
[2025-11-27 18:14:35] 2025-11-27 23:13:40,729 | INFO     | current chi2=2.5726538045282625 (change=1.7138477027758214 %)
[2025-11-27 18:14:35] 2025-11-27 23:13:40,729 | INFO     | left removable region: 30
[2025-11-27 18:14:35] 2025-11-27 23:13:40,730 | INFO     | sum of square deviations: 97930453016.28477
[2025-11-27 18:14:35] 2025-11-27 23:13:40,742 | INFO     | sum of deviations: 913504115495.8864
[2025-11-27 18:14:35] 2025-11-27 23:13:40,742 | INFO     | mean x: 1764263759.729809
[2025-11-27 18:14:35] 2025-11-27 23:13:40,742 | INFO     | mean y: 2906180.118942731
[2025-11-27 18:14:35] 2025-11-27 23:13:40,742 | INFO     | intersect: -16454305603.282326
[2025-11-27 18:14:35] 2025-11-27 23:13:40,743 | INFO     | chi2: 0.017941960575539977
[2025-11-27 18:14:35] 2025-11-27 23:13:40,743 | INFO     | current memory leak: 9.33 B/s (using 681 data points, chi2=0.02)
[2025-11-27 18:14:35] 2025-11-27 23:13:40,744 | INFO     | could have reported an average CPU frequency of 3052 MHz (28 samples)
[2025-11-27 18:14:35] 2025-11-27 23:13:40,744 | INFO     | ..............................
[2025-11-27 18:14:35] 2025-11-27 23:13:40,744 | INFO     | . Timing measurements:
[2025-11-27 18:14:35] 2025-11-27 23:13:40,744 | INFO     | . get job = 0 s
[2025-11-27 18:14:35] 2025-11-27 23:13:40,744 | INFO     | . initial setup = 2 s
[2025-11-27 18:14:35] 2025-11-27 23:13:40,744 | INFO     | . payload setup = 10 s
[2025-11-27 18:14:35] 2025-11-27 23:13:40,744 | INFO     | . stage-in = 0 s
[2025-11-27 18:14:35] 2025-11-27 23:13:40,744 | INFO     | . payload execution = 44021 s
[2025-11-27 18:14:35] 2025-11-27 23:13:40,745 | INFO     | . stage-out = 3 s
[2025-11-27 18:14:35] 2025-11-27 23:13:40,745 | INFO     | . log creation = 0 s
[2025-11-27 18:14:35] 2025-11-27 23:13:40,745 | INFO     | ..............................
[2025-11-27 18:14:35] 2025-11-27 23:13:41,001 | INFO     | 
[2025-11-27 18:14:35] 2025-11-27 23:13:41,001 | INFO     | job summary report
[2025-11-27 18:14:35] 2025-11-27 23:13:41,001 | INFO     | --------------------------------------------------
[2025-11-27 18:14:35] 2025-11-27 23:13:41,001 | INFO     | PanDA job id: 6898271378
[2025-11-27 18:14:35] 2025-11-27 23:13:41,001 | INFO     | task id: 47556161
[2025-11-27 18:14:35] 2025-11-27 23:13:41,001 | INFO     | errors: (none)
[2025-11-27 18:14:35] 2025-11-27 23:13:41,001 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 18:14:35] 2025-11-27 23:13:41,001 | INFO     | pilot state: finished 
[2025-11-27 18:14:35] 2025-11-27 23:13:41,001 | INFO     | transexitcode: 0
[2025-11-27 18:14:35] 2025-11-27 23:13:41,001 | INFO     | exeerrorcode: 0
[2025-11-27 18:14:35] 2025-11-27 23:13:41,001 | INFO     | exeerrordiag: 
[2025-11-27 18:14:35] 2025-11-27 23:13:41,001 | INFO     | exitcode: 0
[2025-11-27 18:14:35] 2025-11-27 23:13:41,002 | INFO     | exitmsg: OK
[2025-11-27 18:14:35] 2025-11-27 23:13:41,002 | INFO     | cpuconsumptiontime: 203726 s
[2025-11-27 18:14:35] 2025-11-27 23:13:41,002 | INFO     | nevents: 1000
[2025-11-27 18:14:35] 2025-11-27 23:13:41,002 | INFO     | neventsw: 0
[2025-11-27 18:14:35] 2025-11-27 23:13:41,002 | INFO     | pid: 4180302
[2025-11-27 18:14:35] 2025-11-27 23:13:41,002 | INFO     | pgrp: 4180302
[2025-11-27 18:14:35] 2025-11-27 23:13:41,002 | INFO     | corecount: 8
[2025-11-27 18:14:35] 2025-11-27 23:13:41,002 | INFO     | event service: False
[2025-11-27 18:14:35] 2025-11-27 23:13:41,002 | INFO     | sizes: {0: 2284315, 7: 2284577, 11: 2284605, 44035: 2330428, 44038: 2339450, 44041: 2339506, 44050: 2339880}
[2025-11-27 18:14:35] 2025-11-27 23:13:41,002 | INFO     | --------------------------------------------------
[2025-11-27 18:14:35] 2025-11-27 23:13:41,002 | INFO     | 
[2025-11-27 18:14:35] 2025-11-27 23:13:41,002 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 18:14:35] 2025-11-27 23:13:41,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,028 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,028 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,028 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,028 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,028 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,028 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,029 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 18:14:35] 2025-11-27 23:13:41,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 18:14:35] 2025-11-27 23:13:41,029 | INFO     | job 6898271378 has completed (purged errors)
[2025-11-27 18:14:35] 2025-11-27 23:13:41,029 | INFO     | overall cleanup function is called
[2025-11-27 18:14:35] 2025-11-27 23:13:42,045 | INFO     | --- collectZombieJob: --- 10, [4180302]
[2025-11-27 18:14:35] 2025-11-27 23:13:42,045 | INFO     | zombie collector waiting for pid 4180302
[2025-11-27 18:14:35] 2025-11-27 23:13:42,045 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 18:14:35] 2025-11-27 23:13:42,045 | INFO     | collected zombie processes
[2025-11-27 18:14:35] 2025-11-27 23:13:42,045 | INFO     | will attempt to kill all subprocesses of pid=4180302
[2025-11-27 18:14:35] 2025-11-27 23:13:42,442 | INFO     | process IDs to be killed: [4180302] (in reverse order)
[2025-11-27 18:14:35] 2025-11-27 23:13:42,602 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 18:14:35] 2025-11-27 23:13:42,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 18:14:35] 2025-11-27 23:13:42,618 | INFO     | did not find any defunct processes belonging to 4180302
[2025-11-27 18:14:35] 2025-11-27 23:13:42,631 | INFO     | did not find any defunct processes belonging to 4180302
[2025-11-27 18:14:35] 2025-11-27 23:13:42,633 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 18:14:35] 2025-11-27 23:13:42,633 | INFO     | ready for new job
[2025-11-27 18:14:35] 2025-11-27 23:13:42,633 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:14:35] 2025-11-27 23:13:42,637 | INFO     | ***************************************
[2025-11-27 18:14:35] 2025-11-27 23:13:42,638 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:14:35] 2025-11-27 23:13:42,638 | INFO     | ***************************************
[2025-11-27 18:14:35] 2025-11-27 23:13:42,638 | INFO     | 
[2025-11-27 18:14:35] 2025-11-27 23:13:42,643 | INFO     | architecture information:
[2025-11-27 18:14:35] 2025-11-27 23:13:42,644 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:14:35] 2025-11-27 23:13:42,666 | INFO     | cat /etc/os-release:
[2025-11-27 18:14:35] NAME="CentOS Linux"
[2025-11-27 18:14:35] VERSION="7 (Core)"
[2025-11-27 18:14:35] ID="centos"
[2025-11-27 18:14:35] ID_LIKE="rhel fedora"
[2025-11-27 18:14:35] VERSION_ID="7"
[2025-11-27 18:14:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:14:35] ANSI_COLOR="0;31"
[2025-11-27 18:14:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:14:35] HOME_URL="https://www.centos.org/"
[2025-11-27 18:14:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:14:35] 
[2025-11-27 18:14:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:14:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:14:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:14:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:14:35] 
[2025-11-27 18:14:35] 2025-11-27 23:13:42,666 | INFO     | ***************************************
[2025-11-27 18:14:35] 2025-11-27 23:13:43,170 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 18:14:35] 2025-11-27 23:13:43,193 | INFO     | sufficient remaining disk space (121539395584 B)
[2025-11-27 18:14:35] 2025-11-27 23:13:43,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:14:35] 2025-11-27 23:13:43,194 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:14:35] 2025-11-27 23:13:43,194 | INFO     | update_server=False
[2025-11-27 18:14:35] 2025-11-27 23:13:43,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:14:35] 2025-11-27 23:13:43,195 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:14:35] 2025-11-27 23:13:43,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:14:35] 2025-11-27 23:13:43,423 | INFO     | aborting loop
[2025-11-27 18:14:35] 2025-11-27 23:13:43,761 | INFO     | all data control threads have been joined
[2025-11-27 18:14:35] 2025-11-27 23:13:44,183 | INFO     | all payload control threads have been joined
[2025-11-27 18:14:35] 2025-11-27 23:13:44,200 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:44,291 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:44,392 | INFO     | all job control threads have been joined
[2025-11-27 18:14:35] 2025-11-27 23:13:44,429 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:44,527 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:44,674 | INFO     | [job] validate thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:44,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:14:35] 2025-11-27 23:13:44,753 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:44,762 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:44,766 | INFO     | [data] control thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:44,794 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:45,019 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:45,189 | INFO     | [payload] control thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:45,294 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:45,397 | INFO     | [job] control thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:45,843 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:14:35] 2025-11-27 23:13:46,700 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:46,848 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:13:47,201 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:14:35] 2025-11-27 23:14:13,236 | INFO     | PID=4173825 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 18:14:35] 2025-11-27 23:14:13,236 | INFO     | .. there are 18 such processes running
[2025-11-27 18:14:35] 2025-11-27 23:14:13,237 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:14:35] 2025-11-27 23:14:13,237 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:14:35] 2025-11-27 23:14:13,237 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:14:35] 2025-11-27 23:14:14,118 [wrapper] supervise_pilot (15 min periods counter: 50)
[2025-11-27 18:14:35] 2025-11-27 23:14:28,557 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:14:35] 2025-11-27 23:14:29,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139774524720960)>', '<ExcThread(monitor, started 139774165755648)>']
[2025-11-27 18:14:35] 2025-11-27 23:14:30,327 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:14:35] 2025-11-27 23:14:30,327 | INFO     | [monitor] control thread has ended
[2025-11-27 18:14:35] 2025-11-27 23:14:34,832 | INFO     | all workflow threads have been joined
[2025-11-27 18:14:35] 2025-11-27 23:14:34,832 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:14:35] 2025-11-27 23:14:34,832 | INFO     | traces error code: 0
[2025-11-27 18:14:35] 2025-11-27 23:14:34,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:14:35] 2025-11-27 23:14:35,016 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:14:35] 2025-11-27 23:14:35,020 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:14:35] 2025-11-27 23:14:35,032 [wrapper] pilotpid: 4173825
[2025-11-27 18:14:35] 2025-11-27 23:14:35,036 [wrapper] Pilot exit status: 0
[2025-11-27 18:14:35] 2025-11-27 23:14:35,057 [wrapper] pandaids: 6898271378
[2025-11-27 18:14:35] 2025-11-27 23:14:35,145 [wrapper] cleanup supervisor_pilot 1600933 4173826
[2025-11-27 18:14:35] 2025-11-27 23:14:35,148 [wrapper] Test setup, not cleaning
[2025-11-27 18:14:35] 2025-11-27 23:14:35,152 [wrapper] apfmon messages muted
[2025-11-27 18:14:35] 2025-11-27 23:14:35,155 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:14:35] 2025-11-27 23:14:35,158 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:14:35]  *** Error codes and diagnostics ***
[2025-11-27 18:14:35]     "exeErrorCode": 0,
[2025-11-27 18:14:35]     "exeErrorDiag": "",
[2025-11-27 18:14:35]     "pilotErrorCode": 0,
[2025-11-27 18:14:35]     "pilotErrorDiag": "",
[2025-11-27 18:14:35]  *** Listing of results directory ***
[2025-11-27 18:14:35] total 1302800
[2025-11-27 18:14:35] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 10:05 queuedata.json
[2025-11-27 18:14:35] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 10:05 pilot3.tar.gz
[2025-11-27 18:14:35] -rwx------. 1 boincer umatlas     36292 Nov 26 10:06 runpilot2-wrapper.sh
[2025-11-27 18:14:35] -rw-r--r--. 1 boincer umatlas       100 Nov 27 05:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:14:35] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 05:58 run_atlas
[2025-11-27 18:14:35] -rw-r--r--. 1 boincer umatlas       105 Nov 27 05:58 job.xml
[2025-11-27 18:14:35] -rw-r--r--. 2 boincer umatlas 409282572 Nov 27 05:58 EVNT.47483658._002531.pool.root.1
[2025-11-27 18:14:35] -rw-r--r--. 2 boincer umatlas    590103 Nov 27 05:58 input.tar.gz
[2025-11-27 18:14:35] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:58 start_atlas.sh
[2025-11-27 18:14:35] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 05:58 shared
[2025-11-27 18:14:35] -rw-r--r--. 1 boincer umatlas         0 Nov 27 05:58 boinc_lockfile
[2025-11-27 18:14:35] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 05:58 pandaJob.out
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas        57 Nov 27 05:58 setup.sh.local
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas    991564 Nov 27 05:59 agis_schedconf.cvmfs.json
[2025-11-27 18:14:35] drwx------. 5 boincer umatlas      4096 Nov 27 05:59 pilot3
[2025-11-27 18:14:35] -rw-r--r--. 1 boincer umatlas       533 Nov 27 18:02 boinc_task_state.xml
[2025-11-27 18:14:35] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 18:10 init_data.xml
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas 904898969 Nov 27 18:12 HITS.47556161._005139.pool.root.1
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas      1051 Nov 27 18:13 memory_monitor_summary.json
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas   1516240 Nov 27 18:13 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas   1977339 Nov 27 18:13 log.47556161._005139.job.log.tgz.1
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas      8576 Nov 27 18:13 heartbeat.json
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas        95 Nov 27 18:14 pilot_heartbeat.json
[2025-11-27 18:14:35] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 18:14 boinc_mmap_file
[2025-11-27 18:14:35] -rw-r--r--. 1 boincer umatlas        29 Nov 27 18:14 wrapper_checkpoint.txt
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas      4825 Nov 27 18:14 pilotlog.txt
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas   6005209 Nov 27 18:14 log.47556161._005139.job.log.1
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas       353 Nov 27 18:14 output.list
[2025-11-27 18:14:35] -rw-r--r--. 1 boincer umatlas       620 Nov 27 18:14 runtime_log
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas   7997440 Nov 27 18:14 result.tar.gz
[2025-11-27 18:14:35] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 18:14 runtime_log.err
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas       659 Nov 27 18:14 QHaKDmzGWi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdyJKDmpXTlZm.diag
[2025-11-27 18:14:35] -rw-r--r--. 1 boincer umatlas     21114 Nov 27 18:14 stderr.txt
[2025-11-27 18:14:35] HITS file was successfully produced:
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas 904898969 Nov 27 18:12 shared/HITS.pool.root.1
[2025-11-27 18:14:35]  *** Contents of shared directory: ***
[2025-11-27 18:14:35] total 1291800
[2025-11-27 18:14:35] -rw-r--r--. 2 boincer umatlas 409282572 Nov 27 05:58 ATLAS.root_0
[2025-11-27 18:14:35] -rw-r--r--. 2 boincer umatlas    590103 Nov 27 05:58 input.tar.gz
[2025-11-27 18:14:35] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:58 start_atlas.sh
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas 904898969 Nov 27 18:12 HITS.pool.root.1
[2025-11-27 18:14:35] -rw-------. 1 boincer umatlas   7997440 Nov 27 18:14 result.tar.gz
18:14:36 (4170143): run_atlas exited; CPU time 203981.301176
18:14:36 (4170143): called boinc_finish(0)

</stderr_txt>
]]>

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