Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:34:49 (2810513): wrapper (7.7.26015): starting
05:34:49 (2810513): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 05:34:49] Arguments: --nthreads 8
[2025-11-27 05:34:49] Threads: 8
[2025-11-27 05:34:49] Checking for CVMFS
[2025-11-27 05:34:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:34:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:34:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:34:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:34:51] 2.13.3.0 9582 31354 258736 153360 3 718 30482040 40960000 70446 16776704 0 402891756 99.726 276678095 48427 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 05:34:51] CVMFS is ok
[2025-11-27 05:34:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:34:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:34:51] Further information can be found at the LHC@home message board.
[2025-11-27 05:34:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:34:51] Checking for apptainer binary...
[2025-11-27 05:34:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:34:51] Running /usr/bin/apptainer --version
[2025-11-27 05:34:51] apptainer version 1.4.4-1.el9
[2025-11-27 05:34:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:34:52] c8-7-4.aglt2.org
[2025-11-27 05:34:52] apptainer works
[2025-11-27 05:34:52] Set ATHENA_PROC_NUMBER=8
[2025-11-27 05:34:52] Set ATHENA_CORE_NUMBER=8
[2025-11-27 05:34:52] Starting ATLAS job with PandaID=6898723884
[2025-11-27 05:34:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:40:33]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:40:33] 2025-11-27 20:39:55,257 | INFO     | monitor loop #2013: job 0:6898723884 is in state 'finished'
[2025-11-27 15:40:33] 2025-11-27 20:39:55,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:40:33] 2025-11-27 20:39:56,800 | INFO     | time since job start (36221s) is within the limit (172800.0s)
[2025-11-27 15:40:33] 2025-11-27 20:39:57,228 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 15:40:33] 2025-11-27 20:39:57,250 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3782.0210156250005
[2025-11-27 15:40:33] 2025-11-27 20:39:57,306 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6898723884/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:40:33] 2025-11-27 20:39:57,307 | INFO     | extracted standard info from prmon json
[2025-11-27 15:40:33] 2025-11-27 20:39:57,307 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:40:33] 2025-11-27 20:39:57,307 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:40:33] 2025-11-27 20:39:57,329 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:40:33] 2025-11-27 20:39:57,330 | INFO     | sum of square deviations: 63684714172.21002
[2025-11-27 15:40:33] 2025-11-27 20:39:57,354 | INFO     | sum of deviations: 561780541730.833
[2025-11-27 15:40:33] 2025-11-27 20:39:57,354 | INFO     | mean x: 1764257952.8711865
[2025-11-27 15:40:33] 2025-11-27 20:39:57,354 | INFO     | mean y: 2825300.5372881354
[2025-11-27 15:40:33] 2025-11-27 20:39:57,354 | INFO     | intersect: -15560183835.953447
[2025-11-27 15:40:33] 2025-11-27 20:39:57,355 | INFO     | chi2: 17.53382189602607
[2025-11-27 15:40:33] 2025-11-27 20:39:57,355 | INFO     | sum of square deviations: 62079544760.22929
[2025-11-27 15:40:33] 2025-11-27 20:39:57,383 | INFO     | sum of deviations: 772972213207.1918
[2025-11-27 15:40:33] 2025-11-27 20:39:57,383 | INFO     | mean x: 1764257800.382906
[2025-11-27 15:40:33] 2025-11-27 20:39:57,383 | INFO     | mean y: 2845366.499145299
[2025-11-27 15:40:33] 2025-11-27 20:39:57,383 | INFO     | intersect: -21964491248.116035
[2025-11-27 15:40:33] 2025-11-27 20:39:57,383 | INFO     | chi2: 13.739224313732043
[2025-11-27 15:40:33] 2025-11-27 20:39:57,383 | INFO     | current chi2=13.739224313732043 (change=21.641588495626547 %)
[2025-11-27 15:40:33] 2025-11-27 20:39:57,425 | INFO     | right removable region: 584
[2025-11-27 15:40:33] 2025-11-27 20:39:57,426 | INFO     | sum of square deviations: 62079051270.22927
[2025-11-27 15:40:33] 2025-11-27 20:39:57,461 | INFO     | sum of deviations: 319438459281.7436
[2025-11-27 15:40:33] 2025-11-27 20:39:57,461 | INFO     | mean x: 1764258105.382906
[2025-11-27 15:40:33] 2025-11-27 20:39:57,461 | INFO     | mean y: 2848314.9743589745
[2025-11-27 15:40:33] 2025-11-27 20:39:57,461 | INFO     | intersect: -9075445882.944721
[2025-11-27 15:40:33] 2025-11-27 20:39:57,462 | INFO     | chi2: 12.908258022852278
[2025-11-27 15:40:33] 2025-11-27 20:39:57,462 | INFO     | current chi2=12.908258022852278 (change=26.38080790715768 %)
[2025-11-27 15:40:33] 2025-11-27 20:39:57,462 | INFO     | sum of square deviations: 60500598180.58459
[2025-11-27 15:40:33] 2025-11-27 20:39:57,514 | INFO     | sum of deviations: 109691712871.89848
[2025-11-27 15:40:33] 2025-11-27 20:39:57,514 | INFO     | mean x: 1764258257.8948276
[2025-11-27 15:40:33] 2025-11-27 20:39:57,514 | INFO     | mean y: 2868580.9327586205
[2025-11-27 15:40:33] 2025-11-27 20:39:57,514 | INFO     | intersect: -3195852028.0641246
[2025-11-27 15:40:33] 2025-11-27 20:39:57,514 | INFO     | chi2: 9.62512531497664
[2025-11-27 15:40:33] 2025-11-27 20:39:57,514 | INFO     | current chi2=9.62512531497664 (change=25.434359168086885 %)
[2025-11-27 15:40:33] 2025-11-27 20:39:57,515 | INFO     | sum of square deviations: 58949228364.198875
[2025-11-27 15:40:33] 2025-11-27 20:39:57,555 | INFO     | sum of deviations: 43371479938.895966
[2025-11-27 15:40:33] 2025-11-27 20:39:57,555 | INFO     | mean x: 1764258410.4017391
[2025-11-27 15:40:33] 2025-11-27 20:39:57,555 | INFO     | mean y: 2875084.104347826
[2025-11-27 15:40:33] 2025-11-27 20:39:57,563 | INFO     | intersect: -1295165626.1323078
[2025-11-27 15:40:33] 2025-11-27 20:39:57,564 | INFO     | chi2: 9.219989867637418
[2025-11-27 15:40:33] 2025-11-27 20:39:57,564 | INFO     | current chi2=9.219989867637418 (change=4.209144650915171 %)
[2025-11-27 15:40:33] 2025-11-27 20:39:57,564 | INFO     | left removable region: 30
[2025-11-27 15:40:33] 2025-11-27 20:39:57,564 | INFO     | sum of square deviations: 52723971866.736404
[2025-11-27 15:40:33] 2025-11-27 20:39:57,579 | INFO     | sum of deviations: 222725083023.7618
[2025-11-27 15:40:33] 2025-11-27 20:39:57,579 | INFO     | mean x: 1764258684.902527
[2025-11-27 15:40:33] 2025-11-27 20:39:57,579 | INFO     | mean y: 2907989.884476534
[2025-11-27 15:40:33] 2025-11-27 20:39:57,579 | INFO     | intersect: -7449957341.724148
[2025-11-27 15:40:33] 2025-11-27 20:39:57,580 | INFO     | chi2: 4.449874700926675
[2025-11-27 15:40:33] 2025-11-27 20:39:57,580 | INFO     | current memory leak: 4.22 B/s (using 554 data points, chi2=4.45)
[2025-11-27 15:40:33] 2025-11-27 20:39:57,580 | INFO     | could have reported an average CPU frequency of 3797 MHz (23 samples)
[2025-11-27 15:40:33] 2025-11-27 20:39:57,580 | INFO     | ..............................
[2025-11-27 15:40:33] 2025-11-27 20:39:57,580 | INFO     | . Timing measurements:
[2025-11-27 15:40:33] 2025-11-27 20:39:57,580 | INFO     | . get job = 0 s
[2025-11-27 15:40:33] 2025-11-27 20:39:57,580 | INFO     | . initial setup = 4 s
[2025-11-27 15:40:33] 2025-11-27 20:39:57,581 | INFO     | . payload setup = 59 s
[2025-11-27 15:40:33] 2025-11-27 20:39:57,581 | INFO     | . stage-in = 0 s
[2025-11-27 15:40:33] 2025-11-27 20:39:57,581 | INFO     | . payload execution = 36005 s
[2025-11-27 15:40:33] 2025-11-27 20:39:57,581 | INFO     | . stage-out = 8 s
[2025-11-27 15:40:33] 2025-11-27 20:39:57,581 | INFO     | . log creation = 1 s
[2025-11-27 15:40:33] 2025-11-27 20:39:57,581 | INFO     | ..............................
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | 
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | job summary report
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | --------------------------------------------------
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | PanDA job id: 6898723884
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | task id: 47556173
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | errors: (none)
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | pilot state: finished 
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | transexitcode: 0
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | exeerrorcode: 0
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | exeerrordiag: 
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | exitcode: 0
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | exitmsg: OK
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | cpuconsumptiontime: 133565 s
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | nevents: 1000
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | neventsw: 0
[2025-11-27 15:40:33] 2025-11-27 20:39:57,763 | INFO     | pid: 2856776
[2025-11-27 15:40:33] 2025-11-27 20:39:57,764 | INFO     | pgrp: 2856776
[2025-11-27 15:40:33] 2025-11-27 20:39:57,764 | INFO     | corecount: 8
[2025-11-27 15:40:33] 2025-11-27 20:39:57,764 | INFO     | event service: False
[2025-11-27 15:40:33] 2025-11-27 20:39:57,764 | INFO     | sizes: {0: 2283486, 1: 2284171, 2: 2284370, 13: 2284370, 24: 2284426, 34: 2284454, 42: 2284872, 46: 2284928, 36069: 2325973, 36078: 2334967, 36081: 2335023, 36119:
[2025-11-27 15:40:33] 2025-11-27 20:39:57,764 | INFO     | --------------------------------------------------
[2025-11-27 15:40:33] 2025-11-27 20:39:57,764 | INFO     | 
[2025-11-27 15:40:33] 2025-11-27 20:39:57,764 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 15:40:33] 2025-11-27 20:39:57,901 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,901 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,901 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,901 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,904 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,904 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,904 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,904 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:40:33] 2025-11-27 20:39:57,904 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,908 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:40:33] 2025-11-27 20:39:57,909 | INFO     | job 6898723884 has completed (purged errors)
[2025-11-27 15:40:33] 2025-11-27 20:39:57,909 | INFO     | overall cleanup function is called
[2025-11-27 15:40:33] 2025-11-27 20:39:58,937 | INFO     | --- collectZombieJob: --- 10, [2856776]
[2025-11-27 15:40:33] 2025-11-27 20:39:58,938 | INFO     | zombie collector waiting for pid 2856776
[2025-11-27 15:40:33] 2025-11-27 20:39:58,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:40:33] 2025-11-27 20:39:58,938 | INFO     | collected zombie processes
[2025-11-27 15:40:33] 2025-11-27 20:39:58,938 | INFO     | will attempt to kill all subprocesses of pid=2856776
[2025-11-27 15:40:33] 2025-11-27 20:40:00,946 | INFO     | process IDs to be killed: [2856776] (in reverse order)
[2025-11-27 15:40:33] 2025-11-27 20:40:01,276 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:40:33] 2025-11-27 20:40:01,276 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:40:33] 2025-11-27 20:40:01,335 | INFO     | did not find any defunct processes belonging to 2856776
[2025-11-27 15:40:33] 2025-11-27 20:40:01,391 | INFO     | did not find any defunct processes belonging to 2856776
[2025-11-27 15:40:33] 2025-11-27 20:40:01,392 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:40:33] 2025-11-27 20:40:01,392 | INFO     | ready for new job
[2025-11-27 15:40:33] 2025-11-27 20:40:01,392 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:40:33] 2025-11-27 20:40:01,395 | INFO     | ***************************************
[2025-11-27 15:40:33] 2025-11-27 20:40:01,395 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:40:33] 2025-11-27 20:40:01,395 | INFO     | ***************************************
[2025-11-27 15:40:33] 2025-11-27 20:40:01,395 | INFO     | 
[2025-11-27 15:40:33] 2025-11-27 20:40:01,400 | INFO     | architecture information:
[2025-11-27 15:40:33] 2025-11-27 20:40:01,403 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:40:33] 2025-11-27 20:40:01,527 | INFO     | cat /etc/os-release:
[2025-11-27 15:40:33] NAME="CentOS Linux"
[2025-11-27 15:40:33] VERSION="7 (Core)"
[2025-11-27 15:40:33] ID="centos"
[2025-11-27 15:40:33] ID_LIKE="rhel fedora"
[2025-11-27 15:40:33] VERSION_ID="7"
[2025-11-27 15:40:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:40:33] ANSI_COLOR="0;31"
[2025-11-27 15:40:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:40:33] HOME_URL="https://www.centos.org/"
[2025-11-27 15:40:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:40:33] 
[2025-11-27 15:40:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:40:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:40:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:40:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:40:33] 
[2025-11-27 15:40:33] 2025-11-27 20:40:01,527 | INFO     | ***************************************
[2025-11-27 15:40:33] 2025-11-27 20:40:02,031 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 15:40:33] 2025-11-27 20:40:02,165 | INFO     | sufficient remaining disk space (161625407488 B)
[2025-11-27 15:40:33] 2025-11-27 20:40:02,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:40:33] 2025-11-27 20:40:02,165 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:40:33] 2025-11-27 20:40:02,165 | INFO     | update_server=False
[2025-11-27 15:40:33] 2025-11-27 20:40:02,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:40:33] 2025-11-27 20:40:02,165 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:40:33] 2025-11-27 20:40:02,170 | INFO     | aborting loop
[2025-11-27 15:40:33] 2025-11-27 20:40:02,664 | INFO     | all data control threads have been joined
[2025-11-27 15:40:33] 2025-11-27 20:40:02,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:40:33] 2025-11-27 20:40:02,784 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:40:33] 2025-11-27 20:40:02,909 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:40:33] 2025-11-27 20:40:03,173 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:03,177 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:03,202 | INFO     | all payload control threads have been joined
[2025-11-27 15:40:33] 2025-11-27 20:40:03,669 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:03,685 | INFO     | [data] control thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:03,790 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:03,790 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:03,790 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:03,811 | INFO     | all job control threads have been joined
[2025-11-27 15:40:33] 2025-11-27 20:40:04,208 | INFO     | [payload] control thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:04,272 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:04,301 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:04,398 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:04,618 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:04,644 | INFO     | [job] validate thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:04,817 | INFO     | [job] control thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:04,916 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:06,689 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:40:33] 2025-11-27 20:40:19,799 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:40:33] 2025-11-27 20:40:21,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139626400966464)>', '<ExcThread(monitor, started 139625662232320)>']
[2025-11-27 15:40:33] 2025-11-27 20:40:26,484 | INFO     | all workflow threads have been joined
[2025-11-27 15:40:33] 2025-11-27 20:40:26,485 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:40:33] 2025-11-27 20:40:26,485 | INFO     | traces error code: 0
[2025-11-27 15:40:33] 2025-11-27 20:40:26,485 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:40:33] 2025-11-27 20:40:32,226 | INFO     | PID=2819313 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:40:33] 2025-11-27 20:40:32,229 | INFO     | .. there are 96 such processes running
[2025-11-27 15:40:33] 2025-11-27 20:40:32,230 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:40:33] 2025-11-27 20:40:32,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:40:33] 2025-11-27 20:40:32,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:40:33] 2025-11-27 20:40:32,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:40:33] 2025-11-27 20:40:32,230 | INFO     | [monitor] control thread has ended
[2025-11-27 15:40:33] 2025-11-27 20:40:32,381 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:40:33] 2025-11-27 20:40:32,394 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:40:33] 2025-11-27 20:40:32,413 [wrapper] pilotpid: 2819313
[2025-11-27 15:40:33] 2025-11-27 20:40:32,429 [wrapper] Pilot exit status: 0
[2025-11-27 15:40:33] 2025-11-27 20:40:32,577 [wrapper] pandaids: 6898723884
[2025-11-27 15:40:33] 2025-11-27 20:40:33,018 [wrapper] cleanup supervisor_pilot 3547985 2819314
[2025-11-27 15:40:33] 2025-11-27 20:40:33,058 [wrapper] Test setup, not cleaning
[2025-11-27 15:40:33] 2025-11-27 20:40:33,075 [wrapper] apfmon messages muted
[2025-11-27 15:40:33] 2025-11-27 20:40:33,111 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:40:33] 2025-11-27 20:40:33,130 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:40:33]  *** Error codes and diagnostics ***
[2025-11-27 15:40:33]     "exeErrorCode": 0,
[2025-11-27 15:40:33]     "exeErrorDiag": "",
[2025-11-27 15:40:33]     "pilotErrorCode": 0,
[2025-11-27 15:40:33]     "pilotErrorDiag": "",
[2025-11-27 15:40:33]  *** Listing of results directory ***
[2025-11-27 15:40:33] total 1302728
[2025-11-27 15:40:33] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 17:16 pilot3.tar.gz
[2025-11-27 15:40:33] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 18:04 queuedata.json
[2025-11-27 15:40:33] -rwx------. 1 boincer umatlas     36292 Nov 26 18:05 runpilot2-wrapper.sh
[2025-11-27 15:40:33] -rw-r--r--. 1 boincer umatlas       100 Nov 27 05:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:40:33] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 05:34 run_atlas
[2025-11-27 15:40:33] -rw-r--r--. 1 boincer umatlas       105 Nov 27 05:34 job.xml
[2025-11-27 15:40:33] -rw-r--r--. 2 boincer umatlas 409023426 Nov 27 05:34 EVNT.47483658._003233.pool.root.1
[2025-11-27 15:40:33] -rw-r--r--. 2 boincer umatlas    590103 Nov 27 05:34 input.tar.gz
[2025-11-27 15:40:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:34 start_atlas.sh
[2025-11-27 15:40:33] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 05:34 shared
[2025-11-27 15:40:33] -rw-r--r--. 1 boincer umatlas         0 Nov 27 05:34 boinc_lockfile
[2025-11-27 15:40:33] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 05:34 pandaJob.out
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas        57 Nov 27 05:34 setup.sh.local
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas    991564 Nov 27 05:36 agis_schedconf.cvmfs.json
[2025-11-27 15:40:33] drwx------. 5 boincer umatlas      4096 Nov 27 05:36 pilot3
[2025-11-27 15:40:33] -rw-r--r--. 1 boincer umatlas       533 Nov 27 15:25 boinc_task_state.xml
[2025-11-27 15:40:33] -rw-r--r--. 1 boincer umatlas      7174 Nov 27 15:37 init_data.xml
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas 908719319 Nov 27 15:38 HITS.47556173._001900.pool.root.1
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas      1059 Nov 27 15:39 memory_monitor_summary.json
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas   1516240 Nov 27 15:39 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas   1807216 Nov 27 15:39 log.47556173._001900.job.log.tgz.1
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas      8587 Nov 27 15:39 heartbeat.json
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas       823 Nov 27 15:40 pilotlog.txt
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas        95 Nov 27 15:40 pilot_heartbeat.json
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas   4356428 Nov 27 15:40 log.47556173._001900.job.log.1
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas       353 Nov 27 15:40 output.list
[2025-11-27 15:40:33] -rw-r--r--. 1 boincer umatlas       620 Nov 27 15:40 runtime_log
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas   6184960 Nov 27 15:40 result.tar.gz
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas       658 Nov 27 15:40 TFKLDmVkdi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaHKKDmcPW4hm.diag
[2025-11-27 15:40:33] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 15:40 runtime_log.err
[2025-11-27 15:40:33] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 15:40 boinc_mmap_file
[2025-11-27 15:40:33] -rw-r--r--. 1 boincer umatlas        29 Nov 27 15:40 wrapper_checkpoint.txt
[2025-11-27 15:40:33] -rw-r--r--. 1 boincer umatlas     21380 Nov 27 15:40 stderr.txt
[2025-11-27 15:40:33] HITS file was successfully produced:
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas 908719319 Nov 27 15:38 shared/HITS.pool.root.1
[2025-11-27 15:40:33]  *** Contents of shared directory: ***
[2025-11-27 15:40:33] total 1293508
[2025-11-27 15:40:33] -rw-r--r--. 2 boincer umatlas 409023426 Nov 27 05:34 ATLAS.root_0
[2025-11-27 15:40:33] -rw-r--r--. 2 boincer umatlas    590103 Nov 27 05:34 input.tar.gz
[2025-11-27 15:40:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:34 start_atlas.sh
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas 908719319 Nov 27 15:38 HITS.pool.root.1
[2025-11-27 15:40:33] -rw-------. 1 boincer umatlas   6184960 Nov 27 15:40 result.tar.gz
15:40:35 (2810513): run_atlas exited; CPU time 134430.055904
15:40:35 (2810513): called boinc_finish(0)

</stderr_txt>
]]>

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