Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:39:01 (28911): wrapper (7.7.26015): starting
05:39:01 (28911): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 05:39:01] Arguments: --nthreads 8
[2025-11-27 05:39:01] Threads: 8
[2025-11-27 05:39:01] Checking for CVMFS
[2025-11-27 05:39:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:39:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:39:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:39:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:39:02] 2.11.2.0 2913 74631 84232 153360 0 81 19626195 20275201 1 130560 0 22767884 99.909 3599824 31083 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 05:39:02] CVMFS is ok
[2025-11-27 05:39:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:39:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:39:02] Further information can be found at the LHC@home message board.
[2025-11-27 05:39:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:39:02] Checking for apptainer binary...
[2025-11-27 05:39:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:39:02] Running /usr/bin/apptainer --version
[2025-11-27 05:39:02] apptainer version 1.3.2-1.el7
[2025-11-27 05:39:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:39:03] c-115-15.aglt2.org
[2025-11-27 05:39:03] apptainer works
[2025-11-27 05:39:03] Set ATHENA_PROC_NUMBER=8
[2025-11-27 05:39:03] Set ATHENA_CORE_NUMBER=8
[2025-11-27 05:39:04] Starting ATLAS job with PandaID=6898271054
[2025-11-27 05:39:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 16:30:45]  *** The last 200 lines of the pilot log: ***
[2025-11-27 16:30:45] 2025-11-27 21:30:10,092 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:30:45] 2025-11-27 21:30:11,773 | INFO     | time since job start (39051s) is within the limit (172800.0s)
[2025-11-27 16:30:45] 2025-11-27 21:30:12,593 | INFO     | monitor loop #2874: job 0:6898271054 is in state 'finished'
[2025-11-27 16:30:45] 2025-11-27 21:30:12,593 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:30:45] 2025-11-27 21:30:12,607 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 16:30:45] 2025-11-27 21:30:12,610 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1795.625
[2025-11-27 16:30:45] 2025-11-27 21:30:12,613 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898271054/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 16:30:45] 2025-11-27 21:30:12,614 | INFO     | extracted standard info from prmon json
[2025-11-27 16:30:45] 2025-11-27 21:30:12,614 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 16:30:45] 2025-11-27 21:30:12,614 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 16:30:45] 2025-11-27 21:30:12,625 | INFO     | fitting pss+swap vs Time
[2025-11-27 16:30:45] 2025-11-27 21:30:12,626 | INFO     | sum of square deviations: 81285884492.67346
[2025-11-27 16:30:45] 2025-11-27 21:30:12,635 | INFO     | sum of deviations: 583252322206.9554
[2025-11-27 16:30:45] 2025-11-27 21:30:12,635 | INFO     | mean x: 1764259481.1140625
[2025-11-27 16:30:45] 2025-11-27 21:30:12,635 | INFO     | mean y: 3150662.49375
[2025-11-27 16:30:45] 2025-11-27 21:30:12,636 | INFO     | intersect: -12655977619.836288
[2025-11-27 16:30:45] 2025-11-27 21:30:12,636 | INFO     | chi2: 6.103920271009928
[2025-11-27 16:30:45] 2025-11-27 21:30:12,637 | INFO     | sum of square deviations: 79395699145.77327
[2025-11-27 16:30:45] 2025-11-27 21:30:12,645 | INFO     | sum of deviations: 819030674632.8765
[2025-11-27 16:30:45] 2025-11-27 21:30:12,645 | INFO     | mean x: 1764259328.6188977
[2025-11-27 16:30:45] 2025-11-27 21:30:12,645 | INFO     | mean y: 3169670.7102362206
[2025-11-27 16:30:45] 2025-11-27 21:30:12,645 | INFO     | intersect: -18196588297.19988
[2025-11-27 16:30:45] 2025-11-27 21:30:12,646 | INFO     | chi2: 2.869030330246519
[2025-11-27 16:30:45] 2025-11-27 21:30:12,646 | INFO     | current chi2=2.869030330246519 (change=52.99692324172802 %)
[2025-11-27 16:30:45] 2025-11-27 21:30:12,647 | INFO     | sum of square deviations: 77535049236.3427
[2025-11-27 16:30:45] 2025-11-27 21:30:12,654 | INFO     | sum of deviations: 880348813403.1815
[2025-11-27 16:30:45] 2025-11-27 21:30:12,655 | INFO     | mean x: 1764259176.1238096
[2025-11-27 16:30:45] 2025-11-27 21:30:12,655 | INFO     | mean y: 3174686.574603175
[2025-11-27 16:30:45] 2025-11-27 21:30:12,655 | INFO     | intersect: -20028584982.551422
[2025-11-27 16:30:45] 2025-11-27 21:30:12,656 | INFO     | chi2: 2.531572788740602
[2025-11-27 16:30:45] 2025-11-27 21:30:12,656 | INFO     | current chi2=2.531572788740602 (change=11.762076474002328 %)
[2025-11-27 16:30:45] 2025-11-27 21:30:12,656 | INFO     | right removable region: 629
[2025-11-27 16:30:45] 2025-11-27 21:30:12,657 | INFO     | sum of square deviations: 79395459415.77325
[2025-11-27 16:30:45] 2025-11-27 21:30:12,665 | INFO     | sum of deviations: 387304933150.6627
[2025-11-27 16:30:45] 2025-11-27 21:30:12,665 | INFO     | mean x: 1764259633.6188977
[2025-11-27 16:30:45] 2025-11-27 21:30:12,665 | INFO     | mean y: 3166438.461417323
[2025-11-27 16:30:45] 2025-11-27 21:30:12,665 | INFO     | intersect: -8603200531.227398
[2025-11-27 16:30:45] 2025-11-27 21:30:12,666 | INFO     | chi2: 3.7077177002012003
[2025-11-27 16:30:45] 2025-11-27 21:30:12,666 | INFO     | current chi2=3.7077177002012003 (change=39.25678030542595 %)
[2025-11-27 16:30:45] 2025-11-27 21:30:12,667 | INFO     | sum of square deviations: 77534608267.58879
[2025-11-27 16:30:45] 2025-11-27 21:30:12,674 | INFO     | sum of deviations: 351170373421.7343
[2025-11-27 16:30:45] 2025-11-27 21:30:12,675 | INFO     | mean x: 1764259786.1222222
[2025-11-27 16:30:45] 2025-11-27 21:30:12,675 | INFO     | mean y: 3169398.1333333333
[2025-11-27 16:30:45] 2025-11-27 21:30:12,675 | INFO     | intersect: -7987530261.653019
[2025-11-27 16:30:45] 2025-11-27 21:30:12,675 | INFO     | chi2: 3.6740263125623676
[2025-11-27 16:30:45] 2025-11-27 21:30:12,676 | INFO     | current chi2=3.6740263125623676 (change=0.9086826550199455 %)
[2025-11-27 16:30:45] 2025-11-27 21:30:12,676 | INFO     | left removable region: 20
[2025-11-27 16:30:45] 2025-11-27 21:30:12,676 | INFO     | sum of square deviations: 70036866857.07384
[2025-11-27 16:30:45] 2025-11-27 21:30:12,686 | INFO     | sum of deviations: 605147041107.3939
[2025-11-27 16:30:45] 2025-11-27 21:30:12,686 | INFO     | mean x: 1764259755.635468
[2025-11-27 16:30:45] 2025-11-27 21:30:12,687 | INFO     | mean y: 3197369.0558292284
[2025-11-27 16:30:45] 2025-11-27 21:30:12,687 | INFO     | intersect: -15240725136.021568
[2025-11-27 16:30:45] 2025-11-27 21:30:12,687 | INFO     | chi2: 0.06245844732027703
[2025-11-27 16:30:45] 2025-11-27 21:30:12,688 | INFO     | current memory leak: 8.64 B/s (using 609 data points, chi2=0.06)
[2025-11-27 16:30:45] 2025-11-27 21:30:12,688 | INFO     | could have reported an average CPU frequency of 2390 MHz (25 samples)
[2025-11-27 16:30:45] 2025-11-27 21:30:12,688 | INFO     | ..............................
[2025-11-27 16:30:45] 2025-11-27 21:30:12,688 | INFO     | . Timing measurements:
[2025-11-27 16:30:45] 2025-11-27 21:30:12,688 | INFO     | . get job = 0 s
[2025-11-27 16:30:45] 2025-11-27 21:30:12,688 | INFO     | . initial setup = 2 s
[2025-11-27 16:30:45] 2025-11-27 21:30:12,689 | INFO     | . payload setup = 8 s
[2025-11-27 16:30:45] 2025-11-27 21:30:12,689 | INFO     | . stage-in = 0 s
[2025-11-27 16:30:45] 2025-11-27 21:30:12,689 | INFO     | . payload execution = 39010 s
[2025-11-27 16:30:45] 2025-11-27 21:30:12,689 | INFO     | . stage-out = 3 s
[2025-11-27 16:30:45] 2025-11-27 21:30:12,689 | INFO     | . log creation = 0 s
[2025-11-27 16:30:45] 2025-11-27 21:30:12,689 | INFO     | ..............................
[2025-11-27 16:30:45] 2025-11-27 21:30:12,772 | INFO     | 
[2025-11-27 16:30:45] 2025-11-27 21:30:12,773 | INFO     | job summary report
[2025-11-27 16:30:45] 2025-11-27 21:30:12,773 | INFO     | --------------------------------------------------
[2025-11-27 16:30:45] 2025-11-27 21:30:12,773 | INFO     | PanDA job id: 6898271054
[2025-11-27 16:30:45] 2025-11-27 21:30:12,773 | INFO     | task id: 47556161
[2025-11-27 16:30:45] 2025-11-27 21:30:12,773 | INFO     | errors: (none)
[2025-11-27 16:30:45] 2025-11-27 21:30:12,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 16:30:45] 2025-11-27 21:30:12,773 | INFO     | pilot state: finished 
[2025-11-27 16:30:45] 2025-11-27 21:30:12,774 | INFO     | transexitcode: 0
[2025-11-27 16:30:45] 2025-11-27 21:30:12,774 | INFO     | exeerrorcode: 0
[2025-11-27 16:30:45] 2025-11-27 21:30:12,774 | INFO     | exeerrordiag: 
[2025-11-27 16:30:45] 2025-11-27 21:30:12,774 | INFO     | exitcode: 0
[2025-11-27 16:30:45] 2025-11-27 21:30:12,774 | INFO     | exitmsg: OK
[2025-11-27 16:30:45] 2025-11-27 21:30:12,774 | INFO     | cpuconsumptiontime: 303087 s
[2025-11-27 16:30:45] 2025-11-27 21:30:12,774 | INFO     | nevents: 1000
[2025-11-27 16:30:45] 2025-11-27 21:30:12,774 | INFO     | neventsw: 0
[2025-11-27 16:30:45] 2025-11-27 21:30:12,775 | INFO     | pid: 6798
[2025-11-27 16:30:45] 2025-11-27 21:30:12,775 | INFO     | pgrp: 6798
[2025-11-27 16:30:45] 2025-11-27 21:30:12,775 | INFO     | corecount: 8
[2025-11-27 16:30:45] 2025-11-27 21:30:12,775 | INFO     | event service: False
[2025-11-27 16:30:45] 2025-11-27 21:30:12,775 | INFO     | sizes: {0: 2284143, 1: 2284342, 6: 2284604, 11: 2284632, 39022: 2327801, 39028: 2336979, 39035: 2337233}
[2025-11-27 16:30:45] 2025-11-27 21:30:12,776 | INFO     | --------------------------------------------------
[2025-11-27 16:30:45] 2025-11-27 21:30:12,776 | INFO     | 
[2025-11-27 16:30:45] 2025-11-27 21:30:12,776 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 16:30:45] 2025-11-27 21:30:12,802 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,803 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,803 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,803 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,805 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,805 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,805 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,805 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,805 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,805 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,806 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,806 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 16:30:45] 2025-11-27 21:30:12,806 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,806 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 16:30:45] 2025-11-27 21:30:12,806 | INFO     | job 6898271054 has completed (purged errors)
[2025-11-27 16:30:45] 2025-11-27 21:30:12,807 | INFO     | overall cleanup function is called
[2025-11-27 16:30:45] 2025-11-27 21:30:13,820 | INFO     | --- collectZombieJob: --- 10, [6798]
[2025-11-27 16:30:45] 2025-11-27 21:30:13,820 | INFO     | zombie collector waiting for pid 6798
[2025-11-27 16:30:45] 2025-11-27 21:30:13,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 16:30:45] 2025-11-27 21:30:13,821 | INFO     | collected zombie processes
[2025-11-27 16:30:45] 2025-11-27 21:30:13,821 | INFO     | will attempt to kill all subprocesses of pid=6798
[2025-11-27 16:30:45] 2025-11-27 21:30:13,910 | INFO     | process IDs to be killed: [6798] (in reverse order)
[2025-11-27 16:30:45] 2025-11-27 21:30:13,970 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 16:30:45] 2025-11-27 21:30:13,970 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 16:30:45] 2025-11-27 21:30:13,976 | INFO     | did not find any defunct processes belonging to 6798
[2025-11-27 16:30:45] 2025-11-27 21:30:13,981 | INFO     | did not find any defunct processes belonging to 6798
[2025-11-27 16:30:45] 2025-11-27 21:30:13,984 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 16:30:45] 2025-11-27 21:30:13,984 | INFO     | ready for new job
[2025-11-27 16:30:45] 2025-11-27 21:30:13,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 16:30:45] 2025-11-27 21:30:13,988 | INFO     | ***************************************
[2025-11-27 16:30:45] 2025-11-27 21:30:13,988 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 16:30:45] 2025-11-27 21:30:13,988 | INFO     | ***************************************
[2025-11-27 16:30:45] 2025-11-27 21:30:13,989 | INFO     | 
[2025-11-27 16:30:45] 2025-11-27 21:30:13,989 | INFO     | architecture information:
[2025-11-27 16:30:45] 2025-11-27 21:30:13,990 | INFO     | executing command: cat /etc/os-release
[2025-11-27 16:30:45] 2025-11-27 21:30:14,009 | INFO     | cat /etc/os-release:
[2025-11-27 16:30:45] NAME="CentOS Linux"
[2025-11-27 16:30:45] VERSION="7 (Core)"
[2025-11-27 16:30:45] ID="centos"
[2025-11-27 16:30:45] ID_LIKE="rhel fedora"
[2025-11-27 16:30:45] VERSION_ID="7"
[2025-11-27 16:30:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 16:30:45] ANSI_COLOR="0;31"
[2025-11-27 16:30:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 16:30:45] HOME_URL="https://www.centos.org/"
[2025-11-27 16:30:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 16:30:45] 
[2025-11-27 16:30:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 16:30:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 16:30:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 16:30:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 16:30:45] 
[2025-11-27 16:30:45] 2025-11-27 21:30:14,009 | INFO     | ***************************************
[2025-11-27 16:30:45] 2025-11-27 21:30:14,512 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 16:30:45] 2025-11-27 21:30:14,533 | INFO     | sufficient remaining disk space (17487101952 B)
[2025-11-27 16:30:45] 2025-11-27 21:30:14,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 16:30:45] 2025-11-27 21:30:14,534 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 16:30:45] 2025-11-27 21:30:14,535 | INFO     | update_server=False
[2025-11-27 16:30:45] 2025-11-27 21:30:14,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 16:30:45] 2025-11-27 21:30:14,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:30:45] 2025-11-27 21:30:14,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:30:45] 2025-11-27 21:30:14,536 | INFO     | aborting loop
[2025-11-27 16:30:45] 2025-11-27 21:30:14,613 | INFO     | all data control threads have been joined
[2025-11-27 16:30:45] 2025-11-27 21:30:14,838 | INFO     | all payload control threads have been joined
[2025-11-27 16:30:45] 2025-11-27 21:30:15,451 | INFO     | all job control threads have been joined
[2025-11-27 16:30:45] 2025-11-27 21:30:15,541 | INFO     | [job] retrieve thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:15,541 | INFO     | [job] job monitor thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:15,542 | INFO     | [job] queue monitor thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:15,548 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:15,619 | INFO     | [data] control thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:15,791 | INFO     | [payload] validate_post thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:15,841 | INFO     | [payload] control thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:15,923 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 16:30:45] 2025-11-27 21:30:15,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 16:30:45] 2025-11-27 21:30:16,109 | INFO     | [job] validate thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:16,144 | INFO     | [data] copytool_in thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:16,286 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:16,456 | INFO     | [job] control thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:16,534 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:16,596 | INFO     | [payload] failed_post thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:16,700 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:17,929 | INFO     | [data] copytool_out thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:20,004 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 16:30:45] 2025-11-27 21:30:25,219 | INFO     | [monitor] cgroup control has ended
[2025-11-27 16:30:45] 2025-11-27 21:30:26,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139922262443840)>', '<ExcThread(monitor, started 139921679431424)>']
[2025-11-27 16:30:45] 2025-11-27 21:30:31,595 | INFO     | all workflow threads have been joined
[2025-11-27 16:30:45] 2025-11-27 21:30:31,595 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 16:30:45] 2025-11-27 21:30:31,596 | INFO     | traces error code: 0
[2025-11-27 16:30:45] 2025-11-27 21:30:31,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 16:30:45] 2025-11-27 21:30:44,986 | INFO     | PID=32630 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 16:30:45] 2025-11-27 21:30:44,987 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 16:30:45] 2025-11-27 21:30:44,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 16:30:45] 2025-11-27 21:30:44,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 16:30:45] 2025-11-27 21:30:44,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 16:30:45] 2025-11-27 21:30:44,988 | INFO     | [monitor] control thread has ended
[2025-11-27 16:30:45] 2025-11-27 21:30:45,094 [wrapper] ==== pilot stdout END ====
[2025-11-27 16:30:45] 2025-11-27 21:30:45,098 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 16:30:45] 2025-11-27 21:30:45,103 [wrapper] pilotpid: 32630
[2025-11-27 16:30:45] 2025-11-27 21:30:45,107 [wrapper] Pilot exit status: 0
[2025-11-27 16:30:45] 2025-11-27 21:30:45,124 [wrapper] pandaids: 6898271054
[2025-11-27 16:30:45] 2025-11-27 21:30:45,166 [wrapper] cleanup supervisor_pilot 30447 32631
[2025-11-27 16:30:45] 2025-11-27 21:30:45,172 [wrapper] Test setup, not cleaning
[2025-11-27 16:30:45] 2025-11-27 21:30:45,176 [wrapper] apfmon messages muted
[2025-11-27 16:30:45] 2025-11-27 21:30:45,180 [wrapper] ==== wrapper stdout END ====
[2025-11-27 16:30:45] 2025-11-27 21:30:45,185 [wrapper] ==== wrapper stderr END ====
[2025-11-27 16:30:45]  *** Error codes and diagnostics ***
[2025-11-27 16:30:45]     "exeErrorCode": 0,
[2025-11-27 16:30:45]     "exeErrorDiag": "",
[2025-11-27 16:30:45]     "pilotErrorCode": 0,
[2025-11-27 16:30:45]     "pilotErrorDiag": "",
[2025-11-27 16:30:45]  *** Listing of results directory ***
[2025-11-27 16:30:45] total 1293360
[2025-11-27 16:30:45] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 09:19 pilot3.tar.gz
[2025-11-27 16:30:45] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 09:32 queuedata.json
[2025-11-27 16:30:45] -rwx------ 1 boincer umatlas     36292 Nov 26 09:35 runpilot2-wrapper.sh
[2025-11-27 16:30:45] -rw-r--r-- 1 boincer umatlas       100 Nov 27 05:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 16:30:45] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 05:38 run_atlas
[2025-11-27 16:30:45] -rw-r--r-- 1 boincer umatlas       105 Nov 27 05:38 job.xml
[2025-11-27 16:30:45] -rw-r--r-- 2 boincer umatlas 408705795 Nov 27 05:39 EVNT.47483658._002520.pool.root.1
[2025-11-27 16:30:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 05:39 start_atlas.sh
[2025-11-27 16:30:45] drwxrwx--x 2 boincer umatlas      4096 Nov 27 05:39 shared
[2025-11-27 16:30:45] -rw-r--r-- 2 boincer umatlas    590110 Nov 27 05:39 input.tar.gz
[2025-11-27 16:30:45] -rw-r--r-- 1 boincer umatlas         0 Nov 27 05:39 boinc_lockfile
[2025-11-27 16:30:45] -rw-r--r-- 1 boincer umatlas      2785 Nov 27 05:39 pandaJob.out
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas        57 Nov 27 05:39 setup.sh.local
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas    991564 Nov 27 05:39 agis_schedconf.cvmfs.json
[2025-11-27 16:30:45] drwx------ 5 boincer umatlas      4096 Nov 27 05:39 pilot3
[2025-11-27 16:30:45] -rw-r--r-- 1 boincer umatlas       533 Nov 27 16:20 boinc_task_state.xml
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas 897216293 Nov 27 16:29 HITS.47556161._005025.pool.root.1
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas      1063 Nov 27 16:29 memory_monitor_summary.json
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas   1516240 Nov 27 16:30 agis_ddmendpoints.agis.ALL.json
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas   1902927 Nov 27 16:30 log.47556161._005025.job.log.tgz.1
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas      8661 Nov 27 16:30 heartbeat.json
[2025-11-27 16:30:45] -rw-r--r-- 1 boincer umatlas      5913 Nov 27 16:30 init_data.xml
[2025-11-27 16:30:45] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 16:30 boinc_mmap_file
[2025-11-27 16:30:45] -rw-r--r-- 1 boincer umatlas        29 Nov 27 16:30 wrapper_checkpoint.txt
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas       745 Nov 27 16:30 pilotlog.txt
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas        95 Nov 27 16:30 pilot_heartbeat.json
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas   5378226 Nov 27 16:30 log.47556161._005025.job.log.1
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas       353 Nov 27 16:30 output.list
[2025-11-27 16:30:45] -rw-r--r-- 1 boincer umatlas       620 Nov 27 16:30 runtime_log
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas   7301120 Nov 27 16:30 result.tar.gz
[2025-11-27 16:30:45] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 16:30 runtime_log.err
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas       668 Nov 27 16:30 GxLLDm2mVi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmB1MKDmyz18Yn.diag
[2025-11-27 16:30:45] -rw-r--r-- 1 boincer umatlas     21300 Nov 27 16:30 stderr.txt
[2025-11-27 16:30:45] HITS file was successfully produced:
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas 897216293 Nov 27 16:29 shared/HITS.pool.root.1
[2025-11-27 16:30:45]  *** Contents of shared directory: ***
[2025-11-27 16:30:45] total 1283048
[2025-11-27 16:30:45] -rw-r--r-- 2 boincer umatlas 408705795 Nov 27 05:39 ATLAS.root_0
[2025-11-27 16:30:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 05:39 start_atlas.sh
[2025-11-27 16:30:45] -rw-r--r-- 2 boincer umatlas    590110 Nov 27 05:39 input.tar.gz
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas 897216293 Nov 27 16:29 HITS.pool.root.1
[2025-11-27 16:30:45] -rw------- 1 boincer umatlas   7301120 Nov 27 16:30 result.tar.gz
16:30:46 (28911): run_atlas exited; CPU time 301100.736353
16:30:46 (28911): called boinc_finish(0)

</stderr_txt>
]]>

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