Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:38:03 (257289): wrapper (7.7.26015): starting
14:38:03 (257289): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 14:38:03] Arguments: --nthreads 12
[2025-11-27 14:38:03] Threads: 12
[2025-11-27 14:38:03] Checking for CVMFS
[2025-11-27 14:38:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 14:38:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 14:38:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 14:38:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 14:38:03] 2.13.3.0 217703 175 43336 153366 0 81 3154501 4096000 0 130560 0 117300 99.982 9300 363 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 14:38:03] CVMFS is ok
[2025-11-27 14:38:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 14:38:03] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 14:38:03] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 14:38:03] Further information can be found at the LHC@home message board.
[2025-11-27 14:38:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 14:38:03] Checking for apptainer binary...
[2025-11-27 14:38:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 14:38:03] Running /usr/bin/apptainer --version
[2025-11-27 14:38:03] apptainer version 1.4.2
[2025-11-27 14:38:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 14:38:03] matisse
[2025-11-27 14:38:03] apptainer works
[2025-11-27 14:38:03] Set ATHENA_PROC_NUMBER=12
[2025-11-27 14:38:03] Set ATHENA_CORE_NUMBER=12
[2025-11-27 14:38:03] Starting ATLAS job with PandaID=6898271056
[2025-11-27 14:38:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:34:31]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:34:31] 2025-11-27 16:33:58,568 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:34:31] 2025-11-27 16:33:58,569 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:34:31] 2025-11-27 16:33:58,570 | INFO     | sum of square deviations: 1605610299.2023082
[2025-11-27 17:34:31] 2025-11-27 16:33:58,570 | INFO     | sum of deviations: 52344222457.381454
[2025-11-27 17:34:31] 2025-11-27 16:33:58,570 | INFO     | mean x: 1764255952.1271677
[2025-11-27 17:34:31] 2025-11-27 16:33:58,570 | INFO     | mean y: 3502090.9826589595
[2025-11-27 17:34:31] 2025-11-27 16:33:58,570 | INFO     | intersect: -57512699739.42663
[2025-11-27 17:34:31] 2025-11-27 16:33:58,570 | INFO     | chi2: 2.569656009616552
[2025-11-27 17:34:31] 2025-11-27 16:33:58,570 | INFO     | sum of square deviations: 1470385559.375
[2025-11-27 17:34:31] 2025-11-27 16:33:58,571 | INFO     | sum of deviations: 84878135615.25
[2025-11-27 17:34:31] 2025-11-27 16:33:58,571 | INFO     | mean x: 1764255799.625
[2025-11-27 17:34:31] 2025-11-27 16:33:58,571 | INFO     | mean y: 3538296.5595238097
[2025-11-27 17:34:31] 2025-11-27 16:33:58,571 | INFO     | intersect: -101838282759.00989
[2025-11-27 17:34:31] 2025-11-27 16:33:58,571 | INFO     | chi2: 1.423764429744194
[2025-11-27 17:34:31] 2025-11-27 16:33:58,571 | INFO     | current chi2=1.423764429744194 (change=44.59318973372431 %)
[2025-11-27 17:34:31] 2025-11-27 16:33:58,571 | INFO     | sum of square deviations: 1342954300.0122643
[2025-11-27 17:34:31] 2025-11-27 16:33:58,571 | INFO     | sum of deviations: 80105368383.87727
[2025-11-27 17:34:31] 2025-11-27 16:33:58,571 | INFO     | mean x: 1764255647.1104295
[2025-11-27 17:34:31] 2025-11-27 16:33:58,571 | INFO     | mean y: 3532582.8957055216
[2025-11-27 17:34:31] 2025-11-27 16:33:58,571 | INFO     | intersect: -105231879027.03482
[2025-11-27 17:34:31] 2025-11-27 16:33:58,571 | INFO     | chi2: 1.423855227657043
[2025-11-27 17:34:31] 2025-11-27 16:33:58,571 | INFO     | current chi2=1.423855227657043 (change=-0.006377312914423875 %)
[2025-11-27 17:34:31] 2025-11-27 16:33:58,571 | INFO     | right removable region: 162
[2025-11-27 17:34:31] 2025-11-27 16:33:58,572 | INFO     | sum of square deviations: 1470382449.1190438
[2025-11-27 17:34:31] 2025-11-27 16:33:58,572 | INFO     | sum of deviations: 15100552275.095236
[2025-11-27 17:34:31] 2025-11-27 16:33:58,572 | INFO     | mean x: 1764256104.6309524
[2025-11-27 17:34:31] 2025-11-27 16:33:58,572 | INFO     | mean y: 3543554.904761905
[2025-11-27 17:34:31] 2025-11-27 16:33:58,572 | INFO     | intersect: -18115036104.82748
[2025-11-27 17:34:31] 2025-11-27 16:33:58,572 | INFO     | chi2: 1.1876862220652806
[2025-11-27 17:34:31] 2025-11-27 16:33:58,572 | INFO     | sufficient remaining disk space (450746122240 B)
[2025-11-27 17:34:31] 2025-11-27 16:33:58,572 | INFO     | current chi2=1.1876862220652806 (change=53.7803418971044 %)
[2025-11-27 17:34:31] 2025-11-27 16:33:58,572 | INFO     | sum of square deviations: 1342968699.0306773
[2025-11-27 17:34:31] 2025-11-27 16:33:58,573 | INFO     | sum of deviations: 9162324652.871166
[2025-11-27 17:34:31] 2025-11-27 16:33:58,573 | INFO     | mean x: 1764256257.1349692
[2025-11-27 17:34:31] 2025-11-27 16:33:58,573 | INFO     | mean y: 3550644.2331288345
[2025-11-27 17:34:31] 2025-11-27 16:33:58,573 | INFO     | intersect: -12032983498.667763
[2025-11-27 17:34:31] 2025-11-27 16:33:58,573 | INFO     | chi2: 1.1791258727151603
[2025-11-27 17:34:31] 2025-11-27 16:33:58,573 | INFO     | current chi2=1.1791258727151603 (change=0.7207584958958776 %)
[2025-11-27 17:34:31] 2025-11-27 16:33:58,573 | INFO     | left removable region: 20
[2025-11-27 17:34:31] 2025-11-27 16:33:58,573 | INFO     | sum of square deviations: 887914825.4647901
[2025-11-27 17:34:31] 2025-11-27 16:33:58,573 | INFO     | sum of deviations: 29857542691.2676
[2025-11-27 17:34:31] 2025-11-27 16:33:58,573 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-11-27 17:34:31] 2025-11-27 16:33:58,573 | INFO     | mean x: 1764256226.6197183
[2025-11-27 17:34:31] 2025-11-27 16:33:58,573 | INFO     | mean y: 3596502.6901408453
[2025-11-27 17:34:31] 2025-11-27 16:33:58,573 | INFO     | intersect: -59322314152.15092
[2025-11-27 17:34:31] 2025-11-27 16:33:58,574 | INFO     | chi2: 0.01489885368677329
[2025-11-27 17:34:31] 2025-11-27 16:33:58,574 | INFO     | current memory leak: 33.63 B/s (using 142 data points, chi2=0.01)
[2025-11-27 17:34:31] 2025-11-27 16:33:58,574 | INFO     | could have reported an average CPU frequency of 3841 MHz (9 samples)
[2025-11-27 17:34:31] 2025-11-27 16:33:58,574 | INFO     | ..............................
[2025-11-27 17:34:31] 2025-11-27 16:33:58,574 | INFO     | . Timing measurements:
[2025-11-27 17:34:31] 2025-11-27 16:33:58,574 | INFO     | . get job = 0 s
[2025-11-27 17:34:31] 2025-11-27 16:33:58,574 | INFO     | . initial setup = 1 s
[2025-11-27 17:34:31] 2025-11-27 16:33:58,574 | INFO     | . payload setup = 2 s
[2025-11-27 17:34:31] 2025-11-27 16:33:58,574 | INFO     | . stage-in = 0 s
[2025-11-27 17:34:31] 2025-11-27 16:33:58,574 | INFO     | . payload execution = 10527 s
[2025-11-27 17:34:31] 2025-11-27 16:33:58,574 | INFO     | . stage-out = 0 s
[2025-11-27 17:34:31] 2025-11-27 16:33:58,574 | INFO     | . log creation = 0 s
[2025-11-27 17:34:31] 2025-11-27 16:33:58,574 | INFO     | ..............................
[2025-11-27 17:34:31] 2025-11-27 16:33:58,607 | INFO     | size of work directory /var/lib/boinc-client/slots/0/PanDA_Pilot-6898271056: 10539640 B (within 2537553920 B limit)
[2025-11-27 17:34:31] 2025-11-27 16:33:58,607 | INFO     | pfn file=/var/lib/boinc-client/slots/0/PanDA_Pilot-6898271056/HITS.47556161._005027.pool.root.1 does not exist (skip from workdir size calculation)
[2025-11-27 17:34:31] 2025-11-27 16:33:58,607 | INFO     | total size of present files: 0 B (workdir size: 10539640 B)
[2025-11-27 17:34:31] 2025-11-27 16:33:58,607 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/0/PanDA_Pilot-6898271056/HITS.47556161._005027.pool.root.1 since it does not exist
[2025-11-27 17:34:31] 2025-11-27 16:33:58,663 | INFO     | number of running child processes to parent process 267617: 1
[2025-11-27 17:34:31] 2025-11-27 16:33:58,664 | INFO     | maximum number of monitored processes: 18
[2025-11-27 17:34:31] 2025-11-27 16:33:58,664 | INFO     | aborting job monitoring since job object (job id=6898271056) has expired
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | 
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | job summary report
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | --------------------------------------------------
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | PanDA job id: 6898271056
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | task id: 47556161
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | errors: (none)
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | pilot state: finished 
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | transexitcode: 0
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | exeerrorcode: 0
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | exeerrordiag: 
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | exitcode: 0
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | exitmsg: OK
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | cpuconsumptiontime: 123431 s
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | nevents: 1000
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | neventsw: 0
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | pid: 267617
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | pgrp: 267617
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | corecount: 12
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | event service: False
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | sizes: {0: 2284150, 1: 2284349, 2: 2284611, 11: 2284639, 10533: 2314668, 10534: 2323860, 10537: 2324114}
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | --------------------------------------------------
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | 
[2025-11-27 17:34:31] 2025-11-27 16:33:59,021 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-27 17:34:31] 2025-11-27 16:33:59,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,035 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,035 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,035 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,035 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,035 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,035 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,035 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,035 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,036 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:34:31] 2025-11-27 16:33:59,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,036 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:34:31] 2025-11-27 16:33:59,036 | INFO     | job 6898271056 has completed (purged errors)
[2025-11-27 17:34:31] 2025-11-27 16:33:59,036 | INFO     | overall cleanup function is called
[2025-11-27 17:34:31] 2025-11-27 16:34:00,048 | INFO     | --- collectZombieJob: --- 10, [267617]
[2025-11-27 17:34:31] 2025-11-27 16:34:00,048 | INFO     | zombie collector waiting for pid 267617
[2025-11-27 17:34:31] 2025-11-27 16:34:00,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:34:31] 2025-11-27 16:34:00,048 | INFO     | collected zombie processes
[2025-11-27 17:34:31] 2025-11-27 16:34:00,048 | INFO     | will attempt to kill all subprocesses of pid=267617
[2025-11-27 17:34:31] 2025-11-27 16:34:00,108 | INFO     | process IDs to be killed: [267617] (in reverse order)
[2025-11-27 17:34:31] 2025-11-27 16:34:00,134 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:34:31] 2025-11-27 16:34:00,134 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:34:31] 2025-11-27 16:34:00,136 | INFO     | did not find any defunct processes belonging to 267617
[2025-11-27 17:34:31] 2025-11-27 16:34:00,138 | INFO     | did not find any defunct processes belonging to 267617
[2025-11-27 17:34:31] 2025-11-27 16:34:00,138 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:34:31] 2025-11-27 16:34:00,138 | INFO     | ready for new job
[2025-11-27 17:34:31] 2025-11-27 16:34:00,138 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:34:31] 2025-11-27 16:34:00,139 | INFO     | ***************************************
[2025-11-27 17:34:31] 2025-11-27 16:34:00,139 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:34:31] 2025-11-27 16:34:00,139 | INFO     | ***************************************
[2025-11-27 17:34:31] 2025-11-27 16:34:00,139 | INFO     | 
[2025-11-27 17:34:31] 2025-11-27 16:34:00,140 | INFO     | architecture information:
[2025-11-27 17:34:31] 2025-11-27 16:34:00,140 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:34:31] 2025-11-27 16:34:00,146 | INFO     | cat /etc/os-release:
[2025-11-27 17:34:31] NAME="CentOS Linux"
[2025-11-27 17:34:31] VERSION="7 (Core)"
[2025-11-27 17:34:31] ID="centos"
[2025-11-27 17:34:31] ID_LIKE="rhel fedora"
[2025-11-27 17:34:31] VERSION_ID="7"
[2025-11-27 17:34:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:34:31] ANSI_COLOR="0;31"
[2025-11-27 17:34:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:34:31] HOME_URL="https://www.centos.org/"
[2025-11-27 17:34:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:34:31] 
[2025-11-27 17:34:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:34:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:34:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:34:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:34:31] 
[2025-11-27 17:34:31] 2025-11-27 16:34:00,146 | INFO     | ***************************************
[2025-11-27 17:34:31] 2025-11-27 16:34:00,649 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-27 17:34:31] 2025-11-27 16:34:00,657 | INFO     | sufficient remaining disk space (450758705152 B)
[2025-11-27 17:34:31] 2025-11-27 16:34:00,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:34:31] 2025-11-27 16:34:00,658 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:34:31] 2025-11-27 16:34:00,658 | INFO     | update_server=False
[2025-11-27 17:34:31] 2025-11-27 16:34:00,658 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:34:31] 2025-11-27 16:34:00,658 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:34:31] 2025-11-27 16:34:00,658 | INFO     | aborting loop
[2025-11-27 17:34:31] 2025-11-27 16:34:00,815 | INFO     | all data control threads have been joined
[2025-11-27 17:34:31] 2025-11-27 16:34:01,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:34:31] 2025-11-27 16:34:01,106 | INFO     | all payload control threads have been joined
[2025-11-27 17:34:31] 2025-11-27 16:34:01,170 | INFO     | all job control threads have been joined
[2025-11-27 17:34:31] 2025-11-27 16:34:01,663 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:01,663 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:01,768 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:01,821 | INFO     | [data] control thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:01,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:34:31] 2025-11-27 16:34:01,869 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:02,025 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:02,103 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:02,112 | INFO     | [payload] control thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:02,175 | INFO     | [job] control thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:02,584 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:02,923 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:03,008 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:03,065 | INFO     | [job] validate thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:03,099 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:03,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:34:31] 2025-11-27 16:34:04,617 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:05,861 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:34:31] 2025-11-27 16:34:25,299 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:34:31] 2025-11-27 16:34:25,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138190364616512)>', '<ExcThread(monitor, started 138189876479744)>']
[2025-11-27 17:34:31] 2025-11-27 16:34:30,390 | INFO     | all workflow threads have been joined
[2025-11-27 17:34:31] 2025-11-27 16:34:30,390 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:34:31] 2025-11-27 16:34:30,390 | INFO     | traces error code: 0
[2025-11-27 17:34:31] 2025-11-27 16:34:30,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:34:31] 2025-11-27 16:34:30,946 | INFO     | PID=261077 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 17:34:31] 2025-11-27 16:34:30,946 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:34:31] 2025-11-27 16:34:30,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:34:31] 2025-11-27 16:34:30,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:34:31] 2025-11-27 16:34:30,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:34:31] 2025-11-27 16:34:30,946 | INFO     | [monitor] control thread has ended
[2025-11-27 17:34:31] 2025-11-27 16:34:30,985 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:34:31] 2025-11-27 16:34:30,987 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:34:31] 2025-11-27 16:34:30,988 [wrapper] pilotpid: 261077
[2025-11-27 17:34:31] 2025-11-27 16:34:30,989 [wrapper] Pilot exit status: 0
[2025-11-27 17:34:31] 2025-11-27 16:34:30,994 [wrapper] pandaids: 6898271056
[2025-11-27 17:34:31] 2025-11-27 16:34:31,011 [wrapper] cleanup supervisor_pilot  296286 261078
[2025-11-27 17:34:31] 2025-11-27 16:34:31,013 [wrapper] Test setup, not cleaning
[2025-11-27 17:34:31] 2025-11-27 16:34:31,014 [wrapper] apfmon messages muted
[2025-11-27 17:34:31] 2025-11-27 16:34:31,015 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:34:31] 2025-11-27 16:34:31,016 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:34:31]  *** Error codes and diagnostics ***
[2025-11-27 17:34:31]     "exeErrorCode": 0,
[2025-11-27 17:34:31]     "exeErrorDiag": "",
[2025-11-27 17:34:31]     "pilotErrorCode": 0,
[2025-11-27 17:34:31]     "pilotErrorDiag": "",
[2025-11-27 17:34:31]  *** Listing of results directory ***
[2025-11-27 17:34:31] total 1320020
[2025-11-27 17:34:31] -rw-r--r-- 1 boinc boinc    576529 Nov 26 15:19 pilot3.tar.gz
[2025-11-27 17:34:31] -rw-r--r-- 1 boinc boinc      5112 Nov 26 15:32 queuedata.json
[2025-11-27 17:34:31] -rwx------ 1 boinc boinc     36292 Nov 26 15:35 runpilot2-wrapper.sh
[2025-11-27 17:34:31] -rw-r--r-- 1 boinc boinc       100 Nov 27 14:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:34:31] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 14:38 run_atlas
[2025-11-27 17:34:31] -rw-r--r-- 1 boinc boinc       105 Nov 27 14:38 job.xml
[2025-11-27 17:34:31] -rw-r--r-- 2 boinc boinc 408705795 Nov 27 14:38 EVNT.47483658._002520.pool.root.1
[2025-11-27 17:34:31] -rw-r--r-- 2 boinc boinc    590113 Nov 27 14:38 input.tar.gz
[2025-11-27 17:34:31] -rw-r--r-- 2 boinc boinc     15847 Nov 27 14:38 start_atlas.sh
[2025-11-27 17:34:31] drwxrwx--x 2 boinc boinc      4096 Nov 27 14:38 shared
[2025-11-27 17:34:31] -rw-r--r-- 1 boinc boinc         0 Nov 27 14:38 boinc_setup_complete
[2025-11-27 17:34:31] -rw-r--r-- 1 boinc boinc      9642 Nov 27 14:38 init_data.xml
[2025-11-27 17:34:31] -rw-r--r-- 1 boinc boinc         0 Nov 27 14:38 boinc_lockfile
[2025-11-27 17:34:31] -rw-r--r-- 1 boinc boinc      2785 Nov 27 14:38 pandaJob.out
[2025-11-27 17:34:31] -rw------- 1 boinc boinc    991588 Nov 27 14:38 agis_schedconf.cvmfs.json
[2025-11-27 17:34:31] -rw------- 1 boinc boinc   1516240 Nov 27 14:38 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:34:31] drwx------ 5 boinc boinc      4096 Nov 27 14:38 pilot3
[2025-11-27 17:34:31] -rw-r--r-- 1 boinc boinc       532 Nov 27 17:30 boinc_task_state.xml
[2025-11-27 17:34:31] -rw------- 1 boinc boinc        95 Nov 27 17:33 pilot_heartbeat.json
[2025-11-27 17:34:31] -rw------- 1 boinc boinc 932214703 Nov 27 17:33 HITS.47556161._005027.pool.root.1
[2025-11-27 17:34:31] -rw------- 1 boinc boinc      1041 Nov 27 17:33 memory_monitor_summary.json
[2025-11-27 17:34:31] -rw------- 1 boinc boinc   1912352 Nov 27 17:33 log.47556161._005027.job.log.tgz.1
[2025-11-27 17:34:31] -rw------- 1 boinc boinc      8560 Nov 27 17:33 heartbeat.json
[2025-11-27 17:34:31] -rw-r--r-- 1 boinc boinc        29 Nov 27 17:34 wrapper_checkpoint.txt
[2025-11-27 17:34:31] -rw-r--r-- 1 boinc boinc      8192 Nov 27 17:34 boinc_mmap_file
[2025-11-27 17:34:31] -rw------- 1 boinc boinc       746 Nov 27 17:34 pilotlog.txt
[2025-11-27 17:34:31] -rw------- 1 boinc boinc   1517036 Nov 27 17:34 log.47556161._005027.job.log.1
[2025-11-27 17:34:31] -rw------- 1 boinc boinc       353 Nov 27 17:34 output.list
[2025-11-27 17:34:31] -rw-r--r-- 1 boinc boinc       620 Nov 27 17:34 runtime_log
[2025-11-27 17:34:31] -rw------- 1 boinc boinc   3450880 Nov 27 17:34 result.tar.gz
[2025-11-27 17:34:31] -rw-r--r-- 1 boinc boinc      8895 Nov 27 17:34 runtime_log.err
[2025-11-27 17:34:31] -rw------- 1 boinc boinc       656 Nov 27 17:34 IUOLDm2mVi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmD1MKDmpsOzvm.diag
[2025-11-27 17:34:31] -rw-r--r-- 1 boinc boinc     21615 Nov 27 17:34 stderr.txt
[2025-11-27 17:34:31] HITS file was successfully produced:
[2025-11-27 17:34:31] -rw------- 1 boinc boinc 932214703 Nov 27 17:33 shared/HITS.pool.root.1
[2025-11-27 17:34:31]  *** Contents of shared directory: ***
[2025-11-27 17:34:31] total 1313472
[2025-11-27 17:34:31] -rw-r--r-- 2 boinc boinc 408705795 Nov 27 14:38 ATLAS.root_0
[2025-11-27 17:34:31] -rw-r--r-- 2 boinc boinc    590113 Nov 27 14:38 input.tar.gz
[2025-11-27 17:34:31] -rw-r--r-- 2 boinc boinc     15847 Nov 27 14:38 start_atlas.sh
[2025-11-27 17:34:31] -rw------- 1 boinc boinc 932214703 Nov 27 17:33 HITS.pool.root.1
[2025-11-27 17:34:31] -rw------- 1 boinc boinc   3450880 Nov 27 17:34 result.tar.gz
17:34:33 (257289): run_atlas exited; CPU time 123288.419327
17:34:33 (257289): called boinc_finish(0)

</stderr_txt>
]]>

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