Stderr output

<core_client_version>8.2.7</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-27 05:09:56 (9804): vboxwrapper version 26210
2025-11-27 05:09:56 (9804): BOINC client version: 8.2.7
2025-11-27 05:09:56 (9804): Detected: VirtualBox VboxManage Interface (Version: 7.2.0)
2025-11-27 05:09:57 (9804): Successfully copied 'init_data.xml' to the shared directory.
2025-11-27 05:09:57 (9804): Create VM. (boinc_0e5a7c17a12b8a5b, slot#1)
2025-11-27 05:09:57 (9804): Setting Memory Size for VM. (4300MB)
2025-11-27 05:09:58 (9804): Setting CPU Count for VM. (3)
2025-11-27 05:09:58 (9804): Setting Chipset Options for VM.
2025-11-27 05:09:58 (9804): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-27 05:09:58 (9804): Setting Boot Options for VM.
2025-11-27 05:09:59 (9804): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-27 05:09:59 (9804): Enabling VM Network Access.
2025-11-27 05:09:59 (9804): Disabling USB Support for VM.
2025-11-27 05:10:00 (9804): Disabling COM Port Support for VM.
2025-11-27 05:10:00 (9804): Disabling LPT Port Support for VM.
2025-11-27 05:10:00 (9804): Disabling Audio Support for VM.
2025-11-27 05:10:01 (9804): Disabling Clipboard Support for VM.
2025-11-27 05:10:01 (9804): Disabling Drag and Drop Support for VM.
2025-11-27 05:10:01 (9804): Adding storage controller(s) to VM.
2025-11-27 05:10:01 (9804): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-27 05:10:02 (9804): Adding VirtualBox Guest Additions to VM.
2025-11-27 05:10:02 (9804): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-27 05:10:02 (9804): forwarding host port 55347 to guest port 80
2025-11-27 05:10:03 (9804): Enabling remote desktop for VM.
2025-11-27 05:10:03 (9804): Enabling shared directory for VM.
2025-11-27 05:10:04 (9804): Starting VM using VBoxManage interface. (boinc_0e5a7c17a12b8a5b, slot#1)
2025-11-27 05:10:09 (9804): Successfully started VM. (PID = '27312')
2025-11-27 05:10:09 (9804): Reporting VM Process ID to BOINC.
2025-11-27 05:10:09 (9804): Guest Log: BIOS: VirtualBox 7.2.0
2025-11-27 05:10:09 (9804): Guest Log: CPUID EDX: 0x178bfbff
2025-11-27 05:10:09 (9804): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-27 05:10:09 (9804): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-27 05:10:09 (9804): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-27 05:10:09 (9804): Detected: Web Application Enabled (http://localhost:55347)
2025-11-27 05:10:09 (9804): Detected: Remote Desktop Enabled (localhost:55348)
2025-11-27 05:10:09 (9804): Preference change detected
2025-11-27 05:10:09 (9804): Setting CPU throttle for VM. (100%)
2025-11-27 05:10:09 (9804): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-27 05:10:11 (9804): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-27 05:10:11 (9804): Guest Log: BIOS: Booting from Hard Disk...
2025-11-27 05:10:13 (9804): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-27 05:10:13 (9804): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-27 05:10:13 (9804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-27 05:10:19 (9804): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-27 05:10:19 (9804): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-27 05:10:23 (9804): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-27 05:10:23 (9804): Guest Log: 00:00:00.000115 main     Log opened 2025-11-27T05:10:21.219151000Z
2025-11-27 05:10:23 (9804): Guest Log: 00:00:00.000199 main     OS Product: Linux
2025-11-27 05:10:23 (9804): Guest Log: 00:00:00.000218 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-27 05:10:23 (9804): Guest Log: 00:00:00.000233 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-27 05:10:23 (9804): Guest Log: 00:00:00.000247 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-27 05:10:23 (9804): Guest Log: 00:00:00.000248 main     Process ID: 1289
2025-11-27 05:10:23 (9804): Guest Log: 00:00:00.000248 main     Package type: LINUX_64BITS_GENERIC
2025-11-27 05:10:23 (9804): Guest Log: 00:00:00.000662 main     5.2.32 r132073 started. Verbose level = 0
2025-11-27 05:10:23 (9804): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-27 05:10:23 (9804): Guest Log: [INFO] Mounting shared directory
2025-11-27 05:10:23 (9804): Guest Log: [INFO] Checking for init_data.xml
2025-11-27 05:10:26 (9804): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-27 05:10:26 (9804): Guest Log: [INFO] Detected branch: prod
2025-11-27 05:10:26 (9804): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-27 05:10:26 (9804): Guest Log: Copying input files
2025-11-27 05:10:27 (9804): Guest Log: Copied input files into RunAtlas.
2025-11-27 05:10:27 (9804): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-27 05:10:27 (9804): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-27 05:10:27 (9804): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-27 05:10:27 (9804): Guest Log: Further information can be found at the LHC@home message board.
2025-11-27 05:10:33 (9804): Guest Log: 00:00:10.002089 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 144 993 000ns (GuestNow=1 764 238 232 365 539 000 ns GuestLast=1 764 220 221 220 546 000 ns fSetTimeLastLoop=true )
2025-11-27 05:10:36 (9804): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-27 05:10:36 (9804): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-27 05:10:36 (9804): Guest Log: 2.6.3.0 1566 0 30192 153358 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-27 05:10:37 (9804): Guest Log: copied the webapp to /var/www
2025-11-27 05:10:37 (9804): Guest Log: ATHENA_PROC_NUMBER=3
2025-11-27 05:10:37 (9804): Guest Log: ATHENA_CORE_NUMBER=3
2025-11-27 05:10:37 (9804): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-27 05:10:37 (9804): Guest Log:  *** Starting ATLAS job. (PandaID=6898722366 taskID=47556161) ***
2025-11-27 06:50:11 (9804): Status Report: Elapsed Time: '6000.000000'
2025-11-27 06:50:11 (9804): Status Report: CPU Time: '16570.765625'
2025-11-27 08:30:13 (9804): Status Report: Elapsed Time: '12000.000000'
2025-11-27 08:30:13 (9804): Status Report: CPU Time: '34498.015625'
2025-11-27 10:10:15 (9804): Status Report: Elapsed Time: '18000.000000'
2025-11-27 10:10:15 (9804): Status Report: CPU Time: '52436.375000'
2025-11-27 11:50:17 (9804): Status Report: Elapsed Time: '24000.000000'
2025-11-27 11:50:17 (9804): Status Report: CPU Time: '70373.875000'
2025-11-27 13:30:20 (9804): Status Report: Elapsed Time: '30000.000000'
2025-11-27 13:30:20 (9804): Status Report: CPU Time: '88322.093750'
2025-11-27 15:10:22 (9804): Status Report: Elapsed Time: '36000.000000'
2025-11-27 15:10:22 (9804): Status Report: CPU Time: '106271.687500'
2025-11-27 16:50:24 (9804): Status Report: Elapsed Time: '42000.000000'
2025-11-27 16:50:24 (9804): Status Report: CPU Time: '124213.250000'
2025-11-27 18:30:26 (9804): Status Report: Elapsed Time: '48000.000000'
2025-11-27 18:30:26 (9804): Status Report: CPU Time: '142159.250000'
2025-11-27 20:10:29 (9804): Status Report: Elapsed Time: '54000.000000'
2025-11-27 20:10:29 (9804): Status Report: CPU Time: '160104.437500'
2025-11-27 21:50:31 (9804): Status Report: Elapsed Time: '60000.000000'
2025-11-27 21:50:31 (9804): Status Report: CPU Time: '178050.875000'
2025-11-27 23:30:33 (9804): Status Report: Elapsed Time: '66000.000000'
2025-11-27 23:30:33 (9804): Status Report: CPU Time: '195995.328125'
2025-11-28 00:11:48 (9804): Guest Log:  *** Job finished ***
2025-11-28 00:11:48 (9804): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:10,264 | INFO     | all workflow threads have been joined
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:10,264 | INFO     | end of generic workflow (traces error code: 0)
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:10,264 | INFO     | traces error code: 0
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:10,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,226 | INFO     | PID=5955 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,226 | INFO     | found 0 job(s) in 20 queues
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,226 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,226 | INFO     | [monitor] control thread has ended
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,335 [wrapper] ==== pilot stdout END ====
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,338 [wrapper] ==== wrapper stdout RESUME ====
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,340 [wrapper] pilotpid: 5955
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,343 [wrapper] Pilot exit status: 0
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,351 [wrapper] pandaids: 6898722366
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,369 [wrapper] cleanup supervisor_pilot  7748 5956
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,376 [wrapper] Test setup, not cleaning
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,378 [wrapper] apfmon messages muted
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,381 [wrapper] ==== wrapper stdout END ====
2025-11-28 00:11:48 (9804): Guest Log: 2025-11-28 05:11:27,384 [wrapper] ==== wrapper stderr END ====
2025-11-28 00:11:48 (9804): Guest Log:  *** Error codes and diagnostics ***
2025-11-28 00:11:48 (9804): Guest Log:     "exeErrorCode": 0,
2025-11-28 00:11:48 (9804): Guest Log:     "exeErrorDiag": "",
2025-11-28 00:11:48 (9804): Guest Log:     "pilotErrorCode": 0,
2025-11-28 00:11:48 (9804): Guest Log:     "pilotErrorDiag": "",
2025-11-28 00:11:48 (9804): Guest Log:  *** Listing of results directory ***
2025-11-28 00:11:48 (9804): Guest Log: total 930092
2025-11-28 00:11:48 (9804): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 26 22:16 pilot3.tar.gz
2025-11-28 00:11:48 (9804): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 26 22:48 queuedata.json
2025-11-28 00:11:48 (9804): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 26 22:49 runpilot2-wrapper.sh
2025-11-28 00:11:48 (9804): Guest Log: -rwxr-xr-x. 1 atlas atlas     10550 Nov 27 10:10 init_data.xml
2025-11-28 00:11:48 (9804): Guest Log: -rwxr-xr-x. 1 atlas atlas    590108 Nov 27 10:10 input.tar.gz
2025-11-28 00:11:48 (9804): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 27 10:10 start_atlas.sh
2025-11-28 00:11:48 (9804): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 27 10:10 EVNT.47483658._002711.pool.root.1 -> /data/./ATLAS.root_0
2025-11-28 00:11:48 (9804): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 27 10:10 pandaJob.out
2025-11-28 00:11:48 (9804): Guest Log: -rw-------. 1 atlas atlas    991551 Nov 27 10:11 agis_schedconf.cvmfs.json
2025-11-28 00:11:48 (9804): Guest Log: drwx------. 5 atlas atlas      4096 Nov 27 10:11 pilot3
2025-11-28 00:11:48 (9804): Guest Log: -rw-------. 1 atlas atlas 926837358 Nov 28 05:10 HITS.47556161._006934.pool.root.1
2025-11-28 00:11:48 (9804): Guest Log: -rw-------. 1 atlas atlas      1040 Nov 28 05:10 memory_monitor_summary.json
2025-11-28 00:11:48 (9804): Guest Log: -rw-------. 1 atlas atlas        95 Nov 28 05:10 pilot_heartbeat.json
2025-11-28 00:11:48 (9804): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 28 05:10 agis_ddmendpoints.agis.ALL.json
2025-11-28 00:11:48 (9804): Guest Log: -rw-------. 1 atlas atlas   1656139 Nov 28 05:10 log.47556161._006934.job.log.tgz.1
2025-11-28 00:11:48 (9804): Guest Log: -rw-------. 1 atlas atlas      8661 Nov 28 05:10 heartbeat.json
2025-11-28 00:11:48 (9804): Guest Log: -rw-------. 1 atlas atlas       744 Nov 28 05:11 pilotlog.txt
2025-11-28 00:11:48 (9804): Guest Log: -rw-------. 1 atlas atlas   9207380 Nov 28 05:11 log.47556161._006934.job.log.1
2025-11-28 00:11:48 (9804): Guest Log: -rw-------. 1 atlas atlas       353 Nov 28 05:11 output.list
2025-11-28 00:11:48 (9804): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 28 05:11 runtime_log
2025-11-28 00:11:48 (9804): Guest Log: -rw-------. 1 atlas atlas  10885120 Nov 28 05:11 result.tar.gz
2025-11-28 00:11:48 (9804): Guest Log: -rw-r--r--. 1 atlas atlas      8738 Nov 28 05:11 runtime_log.err
2025-11-28 00:11:48 (9804): Guest Log: -rw-------. 1 atlas atlas       658 Nov 28 05:11 ijQLDmZVdi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0GKKDmaH57Em.diag
2025-11-28 00:11:48 (9804): Guest Log: Looking for outputfile HITS.47556161._006934.pool.root.1
2025-11-28 00:11:48 (9804): Guest Log: HITS file was successfully produced
2025-11-28 00:11:48 (9804): Guest Log: -rw-------. 1 atlas atlas 926837358 Nov 28 05:10 /home/atlas/RunAtlas/HITS.47556161._006934.pool.root.1
2025-11-28 00:11:50 (9804): Guest Log: Successfully finished the ATLAS job!
2025-11-28 00:11:50 (9804): Guest Log: Copying the results back to the shared directory!
2025-11-28 00:11:50 (9804): Guest Log:  *** Contents of shared directory: ***
2025-11-28 00:11:50 (9804): Guest Log: total 1316700
2025-11-28 00:11:50 (9804): Guest Log: -rwxrwxrwx. 1 root root 409948240 Nov 27 10:09 ATLAS.root_0
2025-11-28 00:11:50 (9804): Guest Log: -rwxrwxrwx. 1 root root 926837358 Nov 28  2025 HITS.pool.root.1
2025-11-28 00:11:50 (9804): Guest Log: -rwxrwxrwx. 1 root root     10550 Nov 27 10:09 init_data.xml
2025-11-28 00:11:50 (9804): Guest Log: -rwxrwxrwx. 1 root root    590108 Nov 27 10:07 input.tar.gz
2025-11-28 00:11:50 (9804): Guest Log: -rwxrwxrwx. 1 root root  10885120 Nov 28  2025 result.tar.gz
2025-11-28 00:11:50 (9804): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 27 10:07 start_atlas.sh
2025-11-28 00:11:50 (9804): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-28 00:11:50 (9804): VM Completion File Detected.
2025-11-28 00:11:50 (9804): Powering off VM.
2025-11-28 00:11:50 (9804): Successfully stopped VM.
2025-11-28 00:11:50 (9804): Deregistering VM. (boinc_0e5a7c17a12b8a5b, slot#1)
2025-11-28 00:11:50 (9804): Removing network bandwidth throttle group from VM.
2025-11-28 00:11:51 (9804): Removing VM from VirtualBox.
2025-11-28 00:11:56 (9804): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN