Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:14:19 (2556846): wrapper (7.7.26015): starting
05:14:19 (2556846): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 05:14:20] Arguments: --nthreads 8
[2025-11-27 05:14:20] Threads: 8
[2025-11-27 05:14:20] Checking for CVMFS
[2025-11-27 05:14:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:14:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:14:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:14:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:14:22] 2.13.3.0 9582 31334 265052 153358 0 864 30441467 40960000 68541 16776704 0 402385038 99.725 276672371 48428 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 05:14:22] CVMFS is ok
[2025-11-27 05:14:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:14:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:14:22] Further information can be found at the LHC@home message board.
[2025-11-27 05:14:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:14:22] Checking for apptainer binary...
[2025-11-27 05:14:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:14:22] Running /usr/bin/apptainer --version
[2025-11-27 05:14:22] apptainer version 1.4.4-1.el9
[2025-11-27 05:14:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:14:23] c8-7-4.aglt2.org
[2025-11-27 05:14:23] apptainer works
[2025-11-27 05:14:23] Set ATHENA_PROC_NUMBER=8
[2025-11-27 05:14:23] Set ATHENA_CORE_NUMBER=8
[2025-11-27 05:14:23] Starting ATLAS job with PandaID=6898215730
[2025-11-27 05:14:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:26:24]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:26:24] 2025-11-27 20:25:09,804 | INFO     | time since job start (36564s) is within the limit (172800.0s)
[2025-11-27 15:26:24] 2025-11-27 20:25:11,811 | INFO     | time since job start (36566s) is within the limit (172800.0s)
[2025-11-27 15:26:24] 2025-11-27 20:25:11,841 | INFO     | monitor loop #2016: job 0:6898215730 is in state 'finished'
[2025-11-27 15:26:24] 2025-11-27 20:25:11,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:26:24] 2025-11-27 20:25:13,829 | INFO     | time since job start (36568s) is within the limit (172800.0s)
[2025-11-27 15:26:24] 2025-11-27 20:25:14,363 | INFO     | monitor loop #2017: job 0:6898215730 is in state 'finished'
[2025-11-27 15:26:24] 2025-11-27 20:25:14,363 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:26:24] 2025-11-27 20:25:15,837 | INFO     | time since job start (36570s) is within the limit (172800.0s)
[2025-11-27 15:26:24] 2025-11-27 20:25:16,893 | INFO     | monitor loop #2018: job 0:6898215730 is in state 'finished'
[2025-11-27 15:26:24] 2025-11-27 20:25:16,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:26:24] 2025-11-27 20:25:19,426 | INFO     | monitor loop #2019: job 0:6898215730 is in state 'finished'
[2025-11-27 15:26:24] 2025-11-27 20:25:19,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:26:24] 2025-11-27 20:25:20,100 | INFO     | PID=2583885 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:26:24] 2025-11-27 20:25:20,100 | INFO     | .. there are 100 such processes running
[2025-11-27 15:26:24] 2025-11-27 20:25:21,104 | INFO     | time since job start (36576s) is within the limit (172800.0s)
[2025-11-27 15:26:24] 2025-11-27 20:25:21,919 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 15:26:24] 2025-11-27 20:25:21,928 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3797.049617187499
[2025-11-27 15:26:24] 2025-11-27 20:25:21,946 | INFO     | monitor loop #2020: job 0:6898215730 is in state 'finished'
[2025-11-27 15:26:24] 2025-11-27 20:25:21,947 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:26:24] 2025-11-27 20:25:21,998 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6898215730/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:26:24] 2025-11-27 20:25:21,999 | INFO     | extracted standard info from prmon json
[2025-11-27 15:26:24] 2025-11-27 20:25:21,999 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:26:24] 2025-11-27 20:25:21,999 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:26:24] 2025-11-27 20:25:22,040 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:26:24] 2025-11-27 20:25:22,041 | INFO     | sum of square deviations: 65977285787.73224
[2025-11-27 15:26:24] 2025-11-27 20:25:22,070 | INFO     | sum of deviations: -62742803525.812836
[2025-11-27 15:26:24] 2025-11-27 20:25:22,070 | INFO     | mean x: 1764256879.1490788
[2025-11-27 15:26:24] 2025-11-27 20:25:22,070 | INFO     | mean y: 2809393.795644891
[2025-11-27 15:26:24] 2025-11-27 20:25:22,070 | INFO     | intersect: 1680575028.072416
[2025-11-27 15:26:24] 2025-11-27 20:25:22,070 | INFO     | chi2: 21.65872727312613
[2025-11-27 15:26:24] 2025-11-27 20:25:22,071 | INFO     | sum of square deviations: 64333594421.074326
[2025-11-27 15:26:24] 2025-11-27 20:25:22,101 | INFO     | sum of deviations: 142542783631.52307
[2025-11-27 15:26:24] 2025-11-27 20:25:22,102 | INFO     | mean x: 1764256726.6587837
[2025-11-27 15:26:24] 2025-11-27 20:25:22,102 | INFO     | mean y: 2828438.2550675673
[2025-11-27 15:26:24] 2025-11-27 20:25:22,102 | INFO     | intersect: -3906203337.7807813
[2025-11-27 15:26:24] 2025-11-27 20:25:22,102 | INFO     | chi2: 17.78716444507593
[2025-11-27 15:26:24] 2025-11-27 20:25:22,102 | INFO     | current chi2=17.78716444507593 (change=17.875301624274034 %)
[2025-11-27 15:26:24] 2025-11-27 20:25:22,102 | INFO     | right removable region: 591
[2025-11-27 15:26:24] 2025-11-27 20:25:22,103 | INFO     | sum of square deviations: 64333175961.074356
[2025-11-27 15:26:24] 2025-11-27 20:25:22,111 | INFO     | sum of deviations: -292770246675.94617
[2025-11-27 15:26:24] 2025-11-27 20:25:22,111 | INFO     | mean x: 1764257031.6587837
[2025-11-27 15:26:24] 2025-11-27 20:25:22,111 | INFO     | mean y: 2830721.2972972975
[2025-11-27 15:26:24] 2025-11-27 20:25:22,111 | INFO     | intersect: 8031689216.812009
[2025-11-27 15:26:24] 2025-11-27 20:25:22,111 | INFO     | chi2: 17.78163704311534
[2025-11-27 15:26:24] 2025-11-27 20:25:22,111 | INFO     | current chi2=17.78163704311534 (change=17.90082206179046 %)
[2025-11-27 15:26:24] 2025-11-27 20:25:22,111 | INFO     | left removable region: 10
[2025-11-27 15:26:24] 2025-11-27 20:25:22,112 | INFO     | sum of square deviations: 60813340530.09293
[2025-11-27 15:26:24] 2025-11-27 20:25:22,132 | INFO     | sum of deviations: -134331944891.33745
[2025-11-27 15:26:24] 2025-11-27 20:25:22,132 | INFO     | mean x: 1764257001.1755593
[2025-11-27 15:26:24] 2025-11-27 20:25:22,132 | INFO     | mean y: 2863478.807228916
[2025-11-27 15:26:24] 2025-11-27 20:25:22,132 | INFO     | intersect: 3899970136.49521
[2025-11-27 15:26:24] 2025-11-27 20:25:22,133 | INFO     | chi2: 12.023816298333758
[2025-11-27 15:26:24] 2025-11-27 20:25:22,133 | INFO     | current memory leak: -2.21 B/s (using 581 data points, chi2=12.02)
[2025-11-27 15:26:24] 2025-11-27 20:25:22,133 | INFO     | could have reported an average CPU frequency of 3797 MHz (23 samples)
[2025-11-27 15:26:24] 2025-11-27 20:25:22,134 | INFO     | ..............................
[2025-11-27 15:26:24] 2025-11-27 20:25:22,134 | INFO     | . Timing measurements:
[2025-11-27 15:26:24] 2025-11-27 20:25:22,134 | INFO     | . get job = 0 s
[2025-11-27 15:26:24] 2025-11-27 20:25:22,134 | INFO     | . initial setup = 4 s
[2025-11-27 15:26:24] 2025-11-27 20:25:22,134 | INFO     | . payload setup = 48 s
[2025-11-27 15:26:24] 2025-11-27 20:25:22,134 | INFO     | . stage-in = 0 s
[2025-11-27 15:26:24] 2025-11-27 20:25:22,134 | INFO     | . payload execution = 36413 s
[2025-11-27 15:26:24] 2025-11-27 20:25:22,134 | INFO     | . stage-out = 5 s
[2025-11-27 15:26:24] 2025-11-27 20:25:22,134 | INFO     | . log creation = 1 s
[2025-11-27 15:26:24] 2025-11-27 20:25:22,134 | INFO     | ..............................
[2025-11-27 15:26:24] 2025-11-27 20:25:22,770 | INFO     | 
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | job summary report
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | --------------------------------------------------
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | PanDA job id: 6898215730
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | task id: 47556161
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | errors: (none)
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | pilot state: finished 
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | transexitcode: 0
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | exeerrorcode: 0
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | exeerrordiag: 
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | exitcode: 0
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | exitmsg: OK
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | cpuconsumptiontime: 134070 s
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | nevents: 1000
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | neventsw: 0
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | pid: 2614824
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | pgrp: 2614824
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | corecount: 8
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | event service: False
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | sizes: {0: 2283487, 1: 2284343, 2: 2284343, 13: 2284371, 23: 2284427, 33: 2284717, 34: 2284901, 36467: 2325974, 36473: 2334968, 36476: 2335024, 36511: 2335270}
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | --------------------------------------------------
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | 
[2025-11-27 15:26:24] 2025-11-27 20:25:22,771 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,919 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:26:24] 2025-11-27 20:25:22,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,920 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:26:24] 2025-11-27 20:25:22,920 | INFO     | job 6898215730 has completed (purged errors)
[2025-11-27 15:26:24] 2025-11-27 20:25:22,920 | INFO     | overall cleanup function is called
[2025-11-27 15:26:24] 2025-11-27 20:25:23,975 | INFO     | --- collectZombieJob: --- 10, [2614824]
[2025-11-27 15:26:24] 2025-11-27 20:25:23,976 | INFO     | zombie collector waiting for pid 2614824
[2025-11-27 15:26:24] 2025-11-27 20:25:23,976 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:26:24] 2025-11-27 20:25:23,976 | INFO     | collected zombie processes
[2025-11-27 15:26:24] 2025-11-27 20:25:23,976 | INFO     | will attempt to kill all subprocesses of pid=2614824
[2025-11-27 15:26:24] 2025-11-27 20:25:25,951 | INFO     | process IDs to be killed: [2614824] (in reverse order)
[2025-11-27 15:26:24] 2025-11-27 20:25:26,850 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:26:24] 2025-11-27 20:25:26,853 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:26:24] 2025-11-27 20:25:27,008 | INFO     | did not find any defunct processes belonging to 2614824
[2025-11-27 15:26:24] 2025-11-27 20:25:27,134 | INFO     | did not find any defunct processes belonging to 2614824
[2025-11-27 15:26:24] 2025-11-27 20:25:27,145 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:26:24] 2025-11-27 20:25:27,145 | INFO     | ready for new job
[2025-11-27 15:26:24] 2025-11-27 20:25:27,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:26:24] 2025-11-27 20:25:27,147 | INFO     | ***************************************
[2025-11-27 15:26:24] 2025-11-27 20:25:27,147 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:26:24] 2025-11-27 20:25:27,147 | INFO     | ***************************************
[2025-11-27 15:26:24] 2025-11-27 20:25:27,147 | INFO     | 
[2025-11-27 15:26:24] 2025-11-27 20:25:27,158 | INFO     | architecture information:
[2025-11-27 15:26:24] 2025-11-27 20:25:27,167 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:26:24] 2025-11-27 20:25:27,203 | INFO     | cat /etc/os-release:
[2025-11-27 15:26:24] NAME="CentOS Linux"
[2025-11-27 15:26:24] VERSION="7 (Core)"
[2025-11-27 15:26:24] ID="centos"
[2025-11-27 15:26:24] ID_LIKE="rhel fedora"
[2025-11-27 15:26:24] VERSION_ID="7"
[2025-11-27 15:26:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:26:24] ANSI_COLOR="0;31"
[2025-11-27 15:26:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:26:24] HOME_URL="https://www.centos.org/"
[2025-11-27 15:26:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:26:24] 
[2025-11-27 15:26:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:26:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:26:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:26:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:26:24] 
[2025-11-27 15:26:24] 2025-11-27 20:25:27,203 | INFO     | ***************************************
[2025-11-27 15:26:24] 2025-11-27 20:25:27,707 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 15:26:24] 2025-11-27 20:25:27,766 | INFO     | sufficient remaining disk space (158736580608 B)
[2025-11-27 15:26:24] 2025-11-27 20:25:27,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:26:24] 2025-11-27 20:25:27,766 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:26:24] 2025-11-27 20:25:27,766 | INFO     | update_server=False
[2025-11-27 15:26:24] 2025-11-27 20:25:27,766 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:26:24] 2025-11-27 20:25:27,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:26:24] 2025-11-27 20:25:27,769 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:26:24] 2025-11-27 20:25:27,841 | INFO     | all job control threads have been joined
[2025-11-27 15:26:24] 2025-11-27 20:25:27,851 | INFO     | all payload control threads have been joined
[2025-11-27 15:26:24] 2025-11-27 20:25:28,012 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:26:24] 2025-11-27 20:25:28,013 | INFO     | aborting loop
[2025-11-27 15:26:24] 2025-11-27 20:25:28,583 | INFO     | all data control threads have been joined
[2025-11-27 15:26:24] 2025-11-27 20:25:28,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:26:24] 2025-11-27 20:25:28,772 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:28,775 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:28,808 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:28,847 | INFO     | [job] control thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:28,857 | INFO     | [payload] control thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:28,967 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:29,018 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:29,118 | INFO     | [job] validate thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:29,171 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:29,442 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:29,498 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:29,502 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:29,589 | INFO     | [data] control thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:29,772 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:30,102 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:32,678 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:26:24] 2025-11-27 20:25:49,701 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:26:24] 2025-11-27 20:25:51,543 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075952334656)>', '<ExcThread(monitor, started 140075325191936)>']
[2025-11-27 15:26:24] 2025-11-27 20:25:56,060 | INFO     | PID=2583885 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:26:24] 2025-11-27 20:25:56,060 | INFO     | .. there are 100 such processes running
[2025-11-27 15:26:24] 2025-11-27 20:25:56,060 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:26:24] 2025-11-27 20:25:56,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:26:24] 2025-11-27 20:25:56,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:26:24] 2025-11-27 20:25:56,060 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:26:24] 2025-11-27 20:25:56,060 | INFO     | [monitor] control thread has ended
[2025-11-27 15:26:24] 2025-11-27 20:25:56,569 | INFO     | all workflow threads have been joined
[2025-11-27 15:26:24] 2025-11-27 20:25:56,570 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:26:24] 2025-11-27 20:25:56,570 | INFO     | traces error code: 0
[2025-11-27 15:26:24] 2025-11-27 20:25:56,570 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:26:24] 2025-11-27 20:25:57,183 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:26:24] 2025-11-27 20:25:57,219 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:26:24] 2025-11-27 20:25:57,250 [wrapper] pilotpid: 2583885
[2025-11-27 15:26:24] 2025-11-27 20:25:57,414 [wrapper] Pilot exit status: 0
[2025-11-27 15:26:24] 2025-11-27 20:25:57,536 [wrapper] pandaids: 6898215730
[2025-11-27 15:26:24] 2025-11-27 20:25:57,812 [wrapper] cleanup supervisor_pilot 3388262 2583886
[2025-11-27 15:26:24] 2025-11-27 20:25:57,843 [wrapper] Test setup, not cleaning
[2025-11-27 15:26:24] 2025-11-27 20:25:57,868 [wrapper] apfmon messages muted
[2025-11-27 15:26:24] 2025-11-27 20:25:57,899 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:26:24] 2025-11-27 20:25:57,943 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:26:24]  *** Error codes and diagnostics ***
[2025-11-27 15:26:24]     "exeErrorCode": 0,
[2025-11-27 15:26:24]     "exeErrorDiag": "",
[2025-11-27 15:26:24]     "pilotErrorCode": 0,
[2025-11-27 15:26:24]     "pilotErrorDiag": "",
[2025-11-27 15:26:24]  *** Listing of results directory ***
[2025-11-27 15:26:24] total 1306504
[2025-11-27 15:26:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 08:40 pilot3.tar.gz
[2025-11-27 15:26:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 09:07 queuedata.json
[2025-11-27 15:26:24] -rwx------. 1 boincer umatlas     36292 Nov 26 09:08 runpilot2-wrapper.sh
[2025-11-27 15:26:24] -rw-r--r--. 1 boincer umatlas       100 Nov 27 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:26:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 05:14 run_atlas
[2025-11-27 15:26:24] -rw-r--r--. 1 boincer umatlas       105 Nov 27 05:14 job.xml
[2025-11-27 15:26:24] -rw-r--r--. 2 boincer umatlas 408621008 Nov 27 05:14 EVNT.47483658._002515.pool.root.1
[2025-11-27 15:26:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:14 start_atlas.sh
[2025-11-27 15:26:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 05:14 shared
[2025-11-27 15:26:24] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 05:14 input.tar.gz
[2025-11-27 15:26:24] -rw-r--r--. 1 boincer umatlas         0 Nov 27 05:14 boinc_lockfile
[2025-11-27 15:26:24] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 05:14 pandaJob.out
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas        57 Nov 27 05:14 setup.sh.local
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas    991564 Nov 27 05:15 agis_schedconf.cvmfs.json
[2025-11-27 15:26:24] drwx------. 5 boincer umatlas      4096 Nov 27 05:15 pilot3
[2025-11-27 15:26:24] -rw-r--r--. 1 boincer umatlas       533 Nov 27 15:00 boinc_task_state.xml
[2025-11-27 15:26:24] -rw-r--r--. 1 boincer umatlas      7173 Nov 27 15:22 init_data.xml
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas 912911980 Nov 27 15:23 HITS.47556161._004972.pool.root.1
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas      1052 Nov 27 15:24 memory_monitor_summary.json
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas   1516240 Nov 27 15:24 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas   1812088 Nov 27 15:24 log.47556161._004972.job.log.tgz.1
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas        95 Nov 27 15:25 pilot_heartbeat.json
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas      8593 Nov 27 15:25 heartbeat.json
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas      4826 Nov 27 15:25 pilotlog.txt
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas   4390689 Nov 27 15:25 log.47556161._004972.job.log.1
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas       353 Nov 27 15:25 output.list
[2025-11-27 15:26:24] -rw-r--r--. 1 boincer umatlas       620 Nov 27 15:25 runtime_log
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas   6225920 Nov 27 15:25 result.tar.gz
[2025-11-27 15:26:24] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 15:25 runtime_log.err
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas       658 Nov 27 15:25 EE8LDm6MVi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQ0MKDmj5JDGo.diag
[2025-11-27 15:26:24] -rw-r--r--. 1 boincer umatlas        29 Nov 27 15:26 wrapper_checkpoint.txt
[2025-11-27 15:26:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 15:26 boinc_mmap_file
[2025-11-27 15:26:24] -rw-r--r--. 1 boincer umatlas     21893 Nov 27 15:26 stderr.txt
[2025-11-27 15:26:24] HITS file was successfully produced:
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas 912911980 Nov 27 15:23 shared/HITS.pool.root.1
[2025-11-27 15:26:24]  *** Contents of shared directory: ***
[2025-11-27 15:26:24] total 1297244
[2025-11-27 15:26:24] -rw-r--r--. 2 boincer umatlas 408621008 Nov 27 05:14 ATLAS.root_0
[2025-11-27 15:26:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:14 start_atlas.sh
[2025-11-27 15:26:24] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 05:14 input.tar.gz
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas 912911980 Nov 27 15:23 HITS.pool.root.1
[2025-11-27 15:26:24] -rw-------. 1 boincer umatlas   6225920 Nov 27 15:25 result.tar.gz
15:26:26 (2556846): run_atlas exited; CPU time 134938.138856
15:26:26 (2556846): called boinc_finish(0)

</stderr_txt>
]]>

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