Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:04:14 (3384053): wrapper (7.7.26015): starting
11:04:14 (3384053): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 11:04:14] Arguments: --nthreads 9
[2025-11-27 11:04:14] Threads: 9
[2025-11-27 11:04:14] Checking for CVMFS
[2025-11-27 11:04:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 11:04:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 11:04:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 11:04:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 11:04:14] 2.13.3.0 11502 31660 335152 153372 0 530 29081586 32935936 53353 16776704 0 314319696 99.634 292694421 36125 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 11:04:14] CVMFS is ok
[2025-11-27 11:04:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 11:04:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 11:04:14] Further information can be found at the LHC@home message board.
[2025-11-27 11:04:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 11:04:14] Checking for apptainer binary...
[2025-11-27 11:04:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 11:04:14] Running /usr/bin/apptainer --version
[2025-11-27 11:04:14] apptainer version 1.4.4-1.el9
[2025-11-27 11:04:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 11:04:14] c7-2-15.aglt2.org
[2025-11-27 11:04:14] apptainer works
[2025-11-27 11:04:14] Set ATHENA_PROC_NUMBER=9
[2025-11-27 11:04:14] Set ATHENA_CORE_NUMBER=9
[2025-11-27 11:04:14] Starting ATLAS job with PandaID=6895376872
[2025-11-27 11:04:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:53:33]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:53:33] 2025-11-28 00:52:51,098 | INFO     | monitor loop #1893: job 0:6895376872 is in state 'finished'
[2025-11-27 19:53:33] 2025-11-28 00:52:51,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 19:53:33] 2025-11-28 00:52:51,296 | INFO     | time since job start (31699s) is within the limit (172800.0s)
[2025-11-27 19:53:33] 2025-11-28 00:52:51,430 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 19:53:33] 2025-11-28 00:52:51,435 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3336.523458333333
[2025-11-27 19:53:33] 2025-11-28 00:52:51,450 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895376872/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 19:53:33] 2025-11-28 00:52:51,451 | INFO     | extracted standard info from prmon json
[2025-11-27 19:53:33] 2025-11-28 00:52:51,451 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:53:33] 2025-11-28 00:52:51,451 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:53:33] 2025-11-28 00:52:51,459 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:53:33] 2025-11-28 00:52:51,460 | INFO     | sum of square deviations: 43346455140.697395
[2025-11-27 19:53:33] 2025-11-28 00:52:51,465 | INFO     | sum of deviations: 472259168621.5325
[2025-11-27 19:53:33] 2025-11-28 00:52:51,465 | INFO     | mean x: 1764275308.3834298
[2025-11-27 19:53:33] 2025-11-28 00:52:51,465 | INFO     | mean y: 2987993.3641618495
[2025-11-27 19:53:33] 2025-11-28 00:52:51,466 | INFO     | intersect: -19218772763.13149
[2025-11-27 19:53:33] 2025-11-28 00:52:51,466 | INFO     | chi2: 5.3442986166018756
[2025-11-27 19:53:33] 2025-11-28 00:52:51,467 | INFO     | sum of square deviations: 42105999829.51756
[2025-11-27 19:53:33] 2025-11-28 00:52:51,472 | INFO     | sum of deviations: 636453669428.1595
[2025-11-27 19:53:33] 2025-11-28 00:52:51,472 | INFO     | mean x: 1764275155.9066148
[2025-11-27 19:53:33] 2025-11-28 00:52:51,472 | INFO     | mean y: 3008166.9824902723
[2025-11-27 19:53:33] 2025-11-28 00:52:51,472 | INFO     | intersect: -26664910927.781086
[2025-11-27 19:53:33] 2025-11-28 00:52:51,473 | INFO     | chi2: 2.63768026170837
[2025-11-27 19:53:33] 2025-11-28 00:52:51,473 | INFO     | current chi2=2.63768026170837 (change=50.64496857427635 %)
[2025-11-27 19:53:33] 2025-11-28 00:52:51,473 | INFO     | sum of square deviations: 40889327146.18478
[2025-11-27 19:53:33] 2025-11-28 00:52:51,479 | INFO     | sum of deviations: 671486884969.0685
[2025-11-27 19:53:33] 2025-11-28 00:52:51,479 | INFO     | mean x: 1764275003.422397
[2025-11-27 19:53:33] 2025-11-28 00:52:51,479 | INFO     | mean y: 3012531.9764243616
[2025-11-27 19:53:33] 2025-11-28 00:52:51,479 | INFO     | intersect: -28970013168.38501
[2025-11-27 19:53:33] 2025-11-28 00:52:51,480 | INFO     | chi2: 2.29357213719519
[2025-11-27 19:53:33] 2025-11-28 00:52:51,480 | INFO     | current chi2=2.29357213719519 (change=13.045861907853398 %)
[2025-11-27 19:53:33] 2025-11-28 00:52:51,480 | INFO     | right removable region: 508
[2025-11-27 19:53:33] 2025-11-28 00:52:51,481 | INFO     | sum of square deviations: 42105276678.32882
[2025-11-27 19:53:33] 2025-11-28 00:52:51,487 | INFO     | sum of deviations: 327463825255.7899
[2025-11-27 19:53:33] 2025-11-28 00:52:51,487 | INFO     | mean x: 1764275460.9046693
[2025-11-27 19:53:33] 2025-11-28 00:52:51,487 | INFO     | mean y: 3005745.587548638
[2025-11-27 19:53:33] 2025-11-28 00:52:51,487 | INFO     | intersect: -13718229140.160635
[2025-11-27 19:53:33] 2025-11-28 00:52:51,488 | INFO     | chi2: 3.224263582718448
[2025-11-27 19:53:33] 2025-11-28 00:52:51,488 | INFO     | current chi2=3.224263582718448 (change=39.66909759304268 %)
[2025-11-27 19:53:33] 2025-11-28 00:52:51,488 | INFO     | sum of square deviations: 40888131315.86626
[2025-11-27 19:53:33] 2025-11-28 00:52:51,493 | INFO     | sum of deviations: 295498017173.0977
[2025-11-27 19:53:33] 2025-11-28 00:52:51,494 | INFO     | mean x: 1764275613.4184675
[2025-11-27 19:53:33] 2025-11-28 00:52:51,494 | INFO     | mean y: 3009748.0746561885
[2025-11-27 19:53:33] 2025-11-28 00:52:51,494 | INFO     | intersect: -12747388197.103796
[2025-11-27 19:53:33] 2025-11-28 00:52:51,494 | INFO     | chi2: 3.1827200157005997
[2025-11-27 19:53:33] 2025-11-28 00:52:51,494 | INFO     | current chi2=3.1827200157005997 (change=1.2884668375288912 %)
[2025-11-27 19:53:33] 2025-11-28 00:52:51,494 | INFO     | left removable region: 20
[2025-11-27 19:53:33] 2025-11-28 00:52:51,495 | INFO     | sum of square deviations: 36033095125.96732
[2025-11-27 19:53:33] 2025-11-28 00:52:51,500 | INFO     | sum of deviations: 436978716397.35266
[2025-11-27 19:53:33] 2025-11-28 00:52:51,500 | INFO     | mean x: 1764275582.9918032
[2025-11-27 19:53:33] 2025-11-28 00:52:51,500 | INFO     | mean y: 3042374.5881147543
[2025-11-27 19:53:33] 2025-11-28 00:52:51,500 | INFO     | intersect: -21392590638.113083
[2025-11-27 19:53:33] 2025-11-28 00:52:51,501 | INFO     | chi2: 0.06973118068154192
[2025-11-27 19:53:33] 2025-11-28 00:52:51,501 | INFO     | current memory leak: 12.13 B/s (using 488 data points, chi2=0.07)
[2025-11-27 19:53:33] 2025-11-28 00:52:51,502 | INFO     | could have reported an average CPU frequency of 3317 MHz (21 samples)
[2025-11-27 19:53:33] 2025-11-28 00:52:51,502 | INFO     | ..............................
[2025-11-27 19:53:33] 2025-11-28 00:52:51,502 | INFO     | . Timing measurements:
[2025-11-27 19:53:33] 2025-11-28 00:52:51,502 | INFO     | . get job = 0 s
[2025-11-27 19:53:33] 2025-11-28 00:52:51,502 | INFO     | . initial setup = 2 s
[2025-11-27 19:53:33] 2025-11-28 00:52:51,502 | INFO     | . payload setup = 9 s
[2025-11-27 19:53:33] 2025-11-28 00:52:51,502 | INFO     | . stage-in = 0 s
[2025-11-27 19:53:33] 2025-11-28 00:52:51,502 | INFO     | . payload execution = 31640 s
[2025-11-27 19:53:33] 2025-11-28 00:52:51,502 | INFO     | . stage-out = 4 s
[2025-11-27 19:53:33] 2025-11-28 00:52:51,502 | INFO     | . log creation = 1 s
[2025-11-27 19:53:33] 2025-11-28 00:52:51,502 | INFO     | ..............................
[2025-11-27 19:53:33] 2025-11-28 00:52:51,721 | INFO     | 
[2025-11-27 19:53:33] 2025-11-28 00:52:51,721 | INFO     | job summary report
[2025-11-27 19:53:33] 2025-11-28 00:52:51,721 | INFO     | --------------------------------------------------
[2025-11-27 19:53:33] 2025-11-28 00:52:51,721 | INFO     | PanDA job id: 6895376872
[2025-11-27 19:53:33] 2025-11-28 00:52:51,721 | INFO     | task id: 47556137
[2025-11-27 19:53:33] 2025-11-28 00:52:51,721 | INFO     | errors: (none)
[2025-11-27 19:53:33] 2025-11-28 00:52:51,721 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:53:33] 2025-11-28 00:52:51,721 | INFO     | pilot state: finished 
[2025-11-27 19:53:33] 2025-11-28 00:52:51,721 | INFO     | transexitcode: 0
[2025-11-27 19:53:33] 2025-11-28 00:52:51,721 | INFO     | exeerrorcode: 0
[2025-11-27 19:53:33] 2025-11-28 00:52:51,721 | INFO     | exeerrordiag: 
[2025-11-27 19:53:33] 2025-11-28 00:52:51,722 | INFO     | exitcode: 0
[2025-11-27 19:53:33] 2025-11-28 00:52:51,722 | INFO     | exitmsg: OK
[2025-11-27 19:53:33] 2025-11-28 00:52:51,722 | INFO     | cpuconsumptiontime: 180613 s
[2025-11-27 19:53:33] 2025-11-28 00:52:51,722 | INFO     | nevents: 1000
[2025-11-27 19:53:33] 2025-11-28 00:52:51,722 | INFO     | neventsw: 0
[2025-11-27 19:53:33] 2025-11-28 00:52:51,722 | INFO     | pid: 3395573
[2025-11-27 19:53:33] 2025-11-28 00:52:51,722 | INFO     | pgrp: 3395573
[2025-11-27 19:53:33] 2025-11-28 00:52:51,722 | INFO     | corecount: 9
[2025-11-27 19:53:33] 2025-11-28 00:52:51,722 | INFO     | event service: False
[2025-11-27 19:53:33] 2025-11-28 00:52:51,722 | INFO     | sizes: {0: 2284093, 1: 2284292, 7: 2284554, 11: 2284582, 31653: 2323794, 31654: 2323793, 31659: 2333055, 31681: 2333245}
[2025-11-27 19:53:33] 2025-11-28 00:52:51,722 | INFO     | --------------------------------------------------
[2025-11-27 19:53:33] 2025-11-28 00:52:51,722 | INFO     | 
[2025-11-27 19:53:33] 2025-11-28 00:52:51,722 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 19:53:33] 2025-11-28 00:52:51,799 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,802 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,802 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,802 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,802 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,802 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,802 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,802 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,802 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,802 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,803 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,803 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,803 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,803 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,803 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,803 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:53:33] 2025-11-28 00:52:51,803 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,803 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:53:33] 2025-11-28 00:52:51,803 | INFO     | job 6895376872 has completed (purged errors)
[2025-11-27 19:53:33] 2025-11-28 00:52:51,803 | INFO     | overall cleanup function is called
[2025-11-27 19:53:33] 2025-11-28 00:52:52,839 | INFO     | --- collectZombieJob: --- 10, [3395573]
[2025-11-27 19:53:33] 2025-11-28 00:52:52,840 | INFO     | zombie collector waiting for pid 3395573
[2025-11-27 19:53:33] 2025-11-28 00:52:52,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:53:33] 2025-11-28 00:52:52,840 | INFO     | collected zombie processes
[2025-11-27 19:53:33] 2025-11-28 00:52:52,840 | INFO     | will attempt to kill all subprocesses of pid=3395573
[2025-11-27 19:53:33] 2025-11-28 00:52:53,669 | INFO     | process IDs to be killed: [3395573] (in reverse order)
[2025-11-27 19:53:33] 2025-11-28 00:52:53,941 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:53:33] 2025-11-28 00:52:53,941 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:53:33] 2025-11-28 00:52:53,977 | INFO     | did not find any defunct processes belonging to 3395573
[2025-11-27 19:53:33] 2025-11-28 00:52:54,012 | INFO     | did not find any defunct processes belonging to 3395573
[2025-11-27 19:53:33] 2025-11-28 00:52:54,013 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:53:33] 2025-11-28 00:52:54,014 | INFO     | ready for new job
[2025-11-27 19:53:33] 2025-11-28 00:52:54,014 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:53:33] 2025-11-28 00:52:54,016 | INFO     | ***************************************
[2025-11-27 19:53:33] 2025-11-28 00:52:54,017 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:53:33] 2025-11-28 00:52:54,017 | INFO     | ***************************************
[2025-11-27 19:53:33] 2025-11-28 00:52:54,017 | INFO     | 
[2025-11-27 19:53:33] 2025-11-28 00:52:54,022 | INFO     | architecture information:
[2025-11-27 19:53:33] 2025-11-28 00:52:54,023 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:53:33] 2025-11-28 00:52:54,065 | INFO     | cat /etc/os-release:
[2025-11-27 19:53:33] NAME="CentOS Linux"
[2025-11-27 19:53:33] VERSION="7 (Core)"
[2025-11-27 19:53:33] ID="centos"
[2025-11-27 19:53:33] ID_LIKE="rhel fedora"
[2025-11-27 19:53:33] VERSION_ID="7"
[2025-11-27 19:53:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:53:33] ANSI_COLOR="0;31"
[2025-11-27 19:53:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:53:33] HOME_URL="https://www.centos.org/"
[2025-11-27 19:53:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:53:33] 
[2025-11-27 19:53:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:53:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:53:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:53:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:53:33] 
[2025-11-27 19:53:33] 2025-11-28 00:52:54,070 | INFO     | ***************************************
[2025-11-27 19:53:33] 2025-11-28 00:52:54,573 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 19:53:33] 2025-11-28 00:52:54,611 | INFO     | sufficient remaining disk space (67648880640 B)
[2025-11-27 19:53:33] 2025-11-28 00:52:54,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:53:33] 2025-11-28 00:52:54,611 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:53:33] 2025-11-28 00:52:54,611 | INFO     | update_server=False
[2025-11-27 19:53:33] 2025-11-28 00:52:54,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:53:33] 2025-11-28 00:52:54,612 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:53:33] 2025-11-28 00:52:54,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:53:33] 2025-11-28 00:52:54,635 | INFO     | aborting loop
[2025-11-27 19:53:33] 2025-11-28 00:52:54,732 | INFO     | all data control threads have been joined
[2025-11-27 19:53:33] 2025-11-28 00:52:54,761 | INFO     | all payload control threads have been joined
[2025-11-27 19:53:33] 2025-11-28 00:52:55,186 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:53:33] 2025-11-28 00:52:55,618 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:55,642 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:55,703 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:55,739 | INFO     | [data] control thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:55,766 | INFO     | [payload] control thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:55,813 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:56,111 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:56,125 | INFO     | [job] validate thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:56,127 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:56,199 | INFO     | all job control threads have been joined
[2025-11-27 19:53:33] 2025-11-28 00:52:56,484 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:56,742 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:56,746 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:53:33] 2025-11-28 00:52:56,901 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:57,198 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:57,205 | INFO     | [job] control thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:57,752 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:52:58,622 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:53:33] 2025-11-28 00:53:25,385 | INFO     | PID=3387757 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:53:33] 2025-11-28 00:53:25,385 | INFO     | .. there are 92 such processes running
[2025-11-27 19:53:33] 2025-11-28 00:53:25,386 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:53:33] 2025-11-28 00:53:25,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:53:33] 2025-11-28 00:53:25,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:53:33] 2025-11-28 00:53:27,312 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:53:33] 2025-11-28 00:53:27,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139670859626304)>', '<ExcThread(monitor, started 139670381913856)>']
[2025-11-27 19:53:33] 2025-11-28 00:53:28,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:53:33] 2025-11-28 00:53:28,418 | INFO     | [monitor] control thread has ended
[2025-11-27 19:53:33] 2025-11-28 00:53:32,823 | INFO     | all workflow threads have been joined
[2025-11-27 19:53:33] 2025-11-28 00:53:32,823 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:53:33] 2025-11-28 00:53:32,823 | INFO     | traces error code: 0
[2025-11-27 19:53:33] 2025-11-28 00:53:32,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:53:33] 2025-11-28 00:53:32,962 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:53:33] 2025-11-28 00:53:32,970 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:53:33] 2025-11-28 00:53:32,973 [wrapper] pilotpid: 3387757
[2025-11-27 19:53:33] 2025-11-28 00:53:32,976 [wrapper] Pilot exit status: 0
[2025-11-27 19:53:33] 2025-11-28 00:53:32,995 [wrapper] pandaids: 6895376872
[2025-11-27 19:53:33] 2025-11-28 00:53:33,155 [wrapper] cleanup supervisor_pilot 2266027 3387758
[2025-11-27 19:53:33] 2025-11-28 00:53:33,160 [wrapper] Test setup, not cleaning
[2025-11-27 19:53:33] 2025-11-28 00:53:33,164 [wrapper] apfmon messages muted
[2025-11-27 19:53:33] 2025-11-28 00:53:33,167 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:53:33] 2025-11-28 00:53:33,205 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:53:33]  *** Error codes and diagnostics ***
[2025-11-27 19:53:33]     "exeErrorCode": 0,
[2025-11-27 19:53:33]     "exeErrorDiag": "",
[2025-11-27 19:53:33]     "pilotErrorCode": 0,
[2025-11-27 19:53:33]     "pilotErrorDiag": "",
[2025-11-27 19:53:33]  *** Listing of results directory ***
[2025-11-27 19:53:33] total 1305440
[2025-11-27 19:53:33] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 19:34 queuedata.json
[2025-11-27 19:53:33] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 19:34 pilot3.tar.gz
[2025-11-27 19:53:33] -rwx------. 1 boincer umatlas     36292 Nov 23 19:35 runpilot2-wrapper.sh
[2025-11-27 19:53:33] -rw-r--r--. 1 boincer umatlas       100 Nov 27 11:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:53:33] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 11:04 run_atlas
[2025-11-27 19:53:33] -rw-r--r--. 1 boincer umatlas       105 Nov 27 11:04 job.xml
[2025-11-27 19:53:33] -rw-r--r--. 2 boincer umatlas 408593572 Nov 27 11:04 EVNT.47483658._000964.pool.root.1
[2025-11-27 19:53:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 11:04 start_atlas.sh
[2025-11-27 19:53:33] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 11:04 shared
[2025-11-27 19:53:33] -rw-r--r--. 2 boincer umatlas    590098 Nov 27 11:04 input.tar.gz
[2025-11-27 19:53:33] -rw-r--r--. 1 boincer umatlas         0 Nov 27 11:04 boinc_lockfile
[2025-11-27 19:53:33] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 11:04 pandaJob.out
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas        57 Nov 27 11:04 setup.sh.local
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas    991572 Nov 27 11:04 agis_schedconf.cvmfs.json
[2025-11-27 19:53:33] drwx------. 5 boincer umatlas      4096 Nov 27 11:04 pilot3
[2025-11-27 19:53:33] -rw-r--r--. 1 boincer umatlas       533 Nov 27 19:44 boinc_task_state.xml
[2025-11-27 19:53:33] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 19:47 init_data.xml
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas 912449869 Nov 27 19:51 HITS.47556137._009509.pool.root.1
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas      1058 Nov 27 19:52 memory_monitor_summary.json
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas   1516240 Nov 27 19:52 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas   1884889 Nov 27 19:52 log.47556137._009509.job.log.tgz.1
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas        95 Nov 27 19:52 pilot_heartbeat.json
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas      8595 Nov 27 19:52 heartbeat.json
[2025-11-27 19:53:33] -rw-r--r--. 1 boincer umatlas        29 Nov 27 19:53 wrapper_checkpoint.txt
[2025-11-27 19:53:33] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:53 boinc_mmap_file
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas      4824 Nov 27 19:53 pilotlog.txt
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas   4015157 Nov 27 19:53 log.47556137._009509.job.log.1
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas       353 Nov 27 19:53 output.list
[2025-11-27 19:53:33] -rw-r--r--. 1 boincer umatlas       620 Nov 27 19:53 runtime_log
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas   5918720 Nov 27 19:53 result.tar.gz
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas       661 Nov 27 19:53 TshNDmtiZh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlJLKDm4aR4Dm.diag
[2025-11-27 19:53:33] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 19:53 runtime_log.err
[2025-11-27 19:53:33] -rw-r--r--. 1 boincer umatlas     21339 Nov 27 19:53 stderr.txt
[2025-11-27 19:53:33] HITS file was successfully produced:
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas 912449869 Nov 27 19:51 shared/HITS.pool.root.1
[2025-11-27 19:53:33]  *** Contents of shared directory: ***
[2025-11-27 19:53:33] total 1296472
[2025-11-27 19:53:33] -rw-r--r--. 2 boincer umatlas 408593572 Nov 27 11:04 ATLAS.root_0
[2025-11-27 19:53:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 11:04 start_atlas.sh
[2025-11-27 19:53:33] -rw-r--r--. 2 boincer umatlas    590098 Nov 27 11:04 input.tar.gz
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas 912449869 Nov 27 19:51 HITS.pool.root.1
[2025-11-27 19:53:33] -rw-------. 1 boincer umatlas   5918720 Nov 27 19:53 result.tar.gz
19:53:55 (3384053): run_atlas exited; CPU time 181332.191227
19:53:55 (3384053): called boinc_finish(0)

</stderr_txt>
]]>

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