Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:14:49 (2567447): wrapper (7.7.26015): starting
05:14:49 (2567447): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 05:14:50] Arguments: --nthreads 8
[2025-11-27 05:14:50] Threads: 8
[2025-11-27 05:14:50] Checking for CVMFS
[2025-11-27 05:14:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:14:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:14:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:14:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:14:52] 2.13.3.0 9582 31334 235928 153360 3 114 30446623 40960000 68305 16776704 0 402412052 99.725 276674765 48428 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 05:14:52] CVMFS is ok
[2025-11-27 05:14:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:14:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:14:52] Further information can be found at the LHC@home message board.
[2025-11-27 05:14:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:14:52] Checking for apptainer binary...
[2025-11-27 05:14:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:14:52] Running /usr/bin/apptainer --version
[2025-11-27 05:14:52] apptainer version 1.4.4-1.el9
[2025-11-27 05:14:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:14:52] c8-7-4.aglt2.org
[2025-11-27 05:14:52] apptainer works
[2025-11-27 05:14:52] Set ATHENA_PROC_NUMBER=8
[2025-11-27 05:14:52] Set ATHENA_CORE_NUMBER=8
[2025-11-27 05:14:52] Starting ATLAS job with PandaID=6898215695
[2025-11-27 05:14:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:34:33]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:34:33] 2025-11-27 20:33:48,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:34:33] 2025-11-27 20:33:49,655 | INFO     | time since job start (37058s) is within the limit (172800.0s)
[2025-11-27 15:34:33] 2025-11-27 20:33:50,749 | INFO     | monitor loop #2050: job 0:6898215695 is in state 'finished'
[2025-11-27 15:34:33] 2025-11-27 20:33:50,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:34:33] 2025-11-27 20:33:51,664 | INFO     | time since job start (37060s) is within the limit (172800.0s)
[2025-11-27 15:34:33] 2025-11-27 20:33:53,304 | INFO     | monitor loop #2051: job 0:6898215695 is in state 'finished'
[2025-11-27 15:34:33] 2025-11-27 20:33:53,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:34:33] 2025-11-27 20:33:54,579 | INFO     | PID=2589198 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:34:33] 2025-11-27 20:33:54,579 | INFO     | .. there are 99 such processes running
[2025-11-27 15:34:33] 2025-11-27 20:33:55,579 | INFO     | time since job start (37064s) is within the limit (172800.0s)
[2025-11-27 15:34:33] 2025-11-27 20:33:55,814 | INFO     | monitor loop #2052: job 0:6898215695 is in state 'finished'
[2025-11-27 15:34:33] 2025-11-27 20:33:55,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:34:33] 2025-11-27 20:33:57,586 | INFO     | time since job start (37066s) is within the limit (172800.0s)
[2025-11-27 15:34:33] 2025-11-27 20:33:58,324 | INFO     | monitor loop #2053: job 0:6898215695 is in state 'finished'
[2025-11-27 15:34:33] 2025-11-27 20:33:58,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:34:33] 2025-11-27 20:33:59,035 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 15:34:33] 2025-11-27 20:33:59,058 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9837656250015
[2025-11-27 15:34:33] 2025-11-27 20:33:59,147 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6898215695/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:34:33] 2025-11-27 20:33:59,147 | INFO     | extracted standard info from prmon json
[2025-11-27 15:34:33] 2025-11-27 20:33:59,148 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:34:33] 2025-11-27 20:33:59,148 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:34:33] 2025-11-27 20:33:59,159 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:34:33] 2025-11-27 20:33:59,159 | INFO     | sum of square deviations: 68665086526.45287
[2025-11-27 15:34:33] 2025-11-27 20:33:59,209 | INFO     | sum of deviations: 178546524491.7332
[2025-11-27 15:34:33] 2025-11-27 20:33:59,209 | INFO     | mean x: 1764257141.12562
[2025-11-27 15:34:33] 2025-11-27 20:33:59,209 | INFO     | mean y: 2821744.7140495866
[2025-11-27 15:34:33] 2025-11-27 20:33:59,209 | INFO     | intersect: -4584691310.211582
[2025-11-27 15:34:33] 2025-11-27 20:33:59,209 | INFO     | chi2: 17.871569133471063
[2025-11-27 15:34:33] 2025-11-27 20:33:59,210 | INFO     | sum of square deviations: 66976853265.0651
[2025-11-27 15:34:33] 2025-11-27 20:33:59,218 | INFO     | sum of deviations: 390318157703.4044
[2025-11-27 15:34:33] 2025-11-27 20:33:59,218 | INFO     | mean x: 1764256988.635
[2025-11-27 15:34:33] 2025-11-27 20:33:59,218 | INFO     | mean y: 2840878.495
[2025-11-27 15:34:33] 2025-11-27 20:33:59,218 | INFO     | intersect: -10278644499.656557
[2025-11-27 15:34:33] 2025-11-27 20:33:59,219 | INFO     | chi2: 14.049440351929531
[2025-11-27 15:34:33] 2025-11-27 20:33:59,219 | INFO     | current chi2=14.049440351929531 (change=21.386643517402142 %)
[2025-11-27 15:34:33] 2025-11-27 20:33:59,219 | INFO     | right removable region: 599
[2025-11-27 15:34:33] 2025-11-27 20:33:59,219 | INFO     | sum of square deviations: 66976437855.065125
[2025-11-27 15:34:33] 2025-11-27 20:33:59,228 | INFO     | sum of deviations: -60096917564.70567
[2025-11-27 15:34:33] 2025-11-27 20:33:59,228 | INFO     | mean x: 1764257293.635
[2025-11-27 15:34:33] 2025-11-27 20:33:59,228 | INFO     | mean y: 2843293.138333333
[2025-11-27 15:34:33] 2025-11-27 20:33:59,228 | INFO     | intersect: 1585883964.3658946
[2025-11-27 15:34:33] 2025-11-27 20:33:59,228 | INFO     | chi2: 13.819957421564887
[2025-11-27 15:34:33] 2025-11-27 20:33:59,228 | INFO     | current chi2=13.819957421564887 (change=22.670710566304155 %)
[2025-11-27 15:34:33] 2025-11-27 20:33:59,228 | INFO     | left removable region: 10
[2025-11-27 15:34:33] 2025-11-27 20:33:59,233 | INFO     | sum of square deviations: 63359852334.94049
[2025-11-27 15:34:33] 2025-11-27 20:33:59,241 | INFO     | sum of deviations: 105992675219.91019
[2025-11-27 15:34:33] 2025-11-27 20:33:59,241 | INFO     | mean x: 1764257263.154499
[2025-11-27 15:34:33] 2025-11-27 20:33:59,241 | INFO     | mean y: 2875497.033955857
[2025-11-27 15:34:33] 2025-11-27 20:33:59,241 | INFO     | intersect: -2948494182.7653155
[2025-11-27 15:34:33] 2025-11-27 20:33:59,242 | INFO     | chi2: 8.311055042365282
[2025-11-27 15:34:33] 2025-11-27 20:33:59,242 | INFO     | current memory leak: 1.67 B/s (using 589 data points, chi2=8.31)
[2025-11-27 15:34:33] 2025-11-27 20:33:59,242 | INFO     | could have reported an average CPU frequency of 3798 MHz (24 samples)
[2025-11-27 15:34:33] 2025-11-27 20:33:59,242 | INFO     | ..............................
[2025-11-27 15:34:33] 2025-11-27 20:33:59,242 | INFO     | . Timing measurements:
[2025-11-27 15:34:33] 2025-11-27 20:33:59,242 | INFO     | . get job = 0 s
[2025-11-27 15:34:33] 2025-11-27 20:33:59,242 | INFO     | . initial setup = 4 s
[2025-11-27 15:34:33] 2025-11-27 20:33:59,242 | INFO     | . payload setup = 45 s
[2025-11-27 15:34:33] 2025-11-27 20:33:59,243 | INFO     | . stage-in = 0 s
[2025-11-27 15:34:33] 2025-11-27 20:33:59,243 | INFO     | . payload execution = 36914 s
[2025-11-27 15:34:33] 2025-11-27 20:33:59,243 | INFO     | . stage-out = 4 s
[2025-11-27 15:34:33] 2025-11-27 20:33:59,243 | INFO     | . log creation = 1 s
[2025-11-27 15:34:33] 2025-11-27 20:33:59,243 | INFO     | ..............................
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | 
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | job summary report
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | --------------------------------------------------
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | PanDA job id: 6898215695
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | task id: 47556161
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | errors: (none)
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | pilot state: finished 
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | transexitcode: 0
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | exeerrorcode: 0
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | exeerrordiag: 
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | exitcode: 0
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | exitmsg: OK
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | cpuconsumptiontime: 138887 s
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | nevents: 1000
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | neventsw: 0
[2025-11-27 15:34:33] 2025-11-27 20:33:59,299 | INFO     | pid: 2623119
[2025-11-27 15:34:33] 2025-11-27 20:33:59,300 | INFO     | pgrp: 2623119
[2025-11-27 15:34:33] 2025-11-27 20:33:59,300 | INFO     | corecount: 8
[2025-11-27 15:34:33] 2025-11-27 20:33:59,300 | INFO     | event service: False
[2025-11-27 15:34:33] 2025-11-27 20:33:59,300 | INFO     | sizes: {0: 2284093, 1: 2284292, 11: 2284292, 22: 2284320, 32: 2284610, 33: 2284638, 36965: 2326225, 36971: 2335219, 36973: 2335275, 37003: 2335299}
[2025-11-27 15:34:33] 2025-11-27 20:33:59,300 | INFO     | --------------------------------------------------
[2025-11-27 15:34:33] 2025-11-27 20:33:59,300 | INFO     | 
[2025-11-27 15:34:33] 2025-11-27 20:33:59,300 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:34:33] 2025-11-27 20:33:59,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,390 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:34:33] 2025-11-27 20:33:59,390 | INFO     | job 6898215695 has completed (purged errors)
[2025-11-27 15:34:33] 2025-11-27 20:33:59,390 | INFO     | overall cleanup function is called
[2025-11-27 15:34:33] 2025-11-27 20:34:00,419 | INFO     | --- collectZombieJob: --- 10, [2623119]
[2025-11-27 15:34:33] 2025-11-27 20:34:00,420 | INFO     | zombie collector waiting for pid 2623119
[2025-11-27 15:34:33] 2025-11-27 20:34:00,420 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:34:33] 2025-11-27 20:34:00,420 | INFO     | collected zombie processes
[2025-11-27 15:34:33] 2025-11-27 20:34:00,420 | INFO     | will attempt to kill all subprocesses of pid=2623119
[2025-11-27 15:34:33] 2025-11-27 20:34:01,821 | INFO     | process IDs to be killed: [2623119] (in reverse order)
[2025-11-27 15:34:33] 2025-11-27 20:34:02,438 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:34:33] 2025-11-27 20:34:02,438 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:34:33] 2025-11-27 20:34:02,484 | INFO     | did not find any defunct processes belonging to 2623119
[2025-11-27 15:34:33] 2025-11-27 20:34:02,517 | INFO     | did not find any defunct processes belonging to 2623119
[2025-11-27 15:34:33] 2025-11-27 20:34:02,524 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:34:33] 2025-11-27 20:34:02,524 | INFO     | ready for new job
[2025-11-27 15:34:33] 2025-11-27 20:34:02,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:34:33] 2025-11-27 20:34:02,526 | INFO     | ***************************************
[2025-11-27 15:34:33] 2025-11-27 20:34:02,526 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:34:33] 2025-11-27 20:34:02,526 | INFO     | ***************************************
[2025-11-27 15:34:33] 2025-11-27 20:34:02,526 | INFO     | 
[2025-11-27 15:34:33] 2025-11-27 20:34:02,537 | INFO     | architecture information:
[2025-11-27 15:34:33] 2025-11-27 20:34:02,547 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:34:33] 2025-11-27 20:34:02,618 | INFO     | cat /etc/os-release:
[2025-11-27 15:34:33] NAME="CentOS Linux"
[2025-11-27 15:34:33] VERSION="7 (Core)"
[2025-11-27 15:34:33] ID="centos"
[2025-11-27 15:34:33] ID_LIKE="rhel fedora"
[2025-11-27 15:34:33] VERSION_ID="7"
[2025-11-27 15:34:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:34:33] ANSI_COLOR="0;31"
[2025-11-27 15:34:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:34:33] HOME_URL="https://www.centos.org/"
[2025-11-27 15:34:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:34:33] 
[2025-11-27 15:34:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:34:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:34:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:34:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:34:33] 
[2025-11-27 15:34:33] 2025-11-27 20:34:02,618 | INFO     | ***************************************
[2025-11-27 15:34:33] 2025-11-27 20:34:03,125 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 15:34:33] 2025-11-27 20:34:03,205 | INFO     | sufficient remaining disk space (159948734464 B)
[2025-11-27 15:34:33] 2025-11-27 20:34:03,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:34:33] 2025-11-27 20:34:03,205 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:34:33] 2025-11-27 20:34:03,205 | INFO     | update_server=False
[2025-11-27 15:34:33] 2025-11-27 20:34:03,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:34:33] 2025-11-27 20:34:03,206 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:34:33] 2025-11-27 20:34:03,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:34:33] 2025-11-27 20:34:03,339 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 15:34:33] 2025-11-27 20:34:03,340 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 15:34:33] 2025-11-27 20:34:03,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:34:33] 2025-11-27 20:34:03,340 | INFO     | will abort loop
[2025-11-27 15:34:33] 2025-11-27 20:34:03,594 | INFO     | all data control threads have been joined
[2025-11-27 15:34:33] 2025-11-27 20:34:03,716 | INFO     | all job control threads have been joined
[2025-11-27 15:34:33] 2025-11-27 20:34:04,210 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:04,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:34:33] 2025-11-27 20:34:04,345 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:04,393 | INFO     | all payload control threads have been joined
[2025-11-27 15:34:33] 2025-11-27 20:34:04,600 | INFO     | [data] control thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:04,733 | INFO     | [job] control thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:04,883 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:05,219 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:05,232 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:05,239 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:05,330 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:05,399 | INFO     | [payload] control thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:05,417 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:05,594 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:05,686 | INFO     | [job] validate thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:05,711 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:05,792 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:07,232 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:34:33] 2025-11-27 20:34:15,715 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:34:33] 2025-11-27 20:34:17,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139906036995904)>', '<ExcThread(monitor, started 139905405548288)>']
[2025-11-27 15:34:33] 2025-11-27 20:34:22,638 | INFO     | all workflow threads have been joined
[2025-11-27 15:34:33] 2025-11-27 20:34:22,639 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:34:33] 2025-11-27 20:34:22,639 | INFO     | traces error code: 0
[2025-11-27 15:34:33] 2025-11-27 20:34:22,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:34:33] 2025-11-27 20:34:31,752 | INFO     | PID=2589198 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:34:33] 2025-11-27 20:34:31,753 | INFO     | .. there are 98 such processes running
[2025-11-27 15:34:33] 2025-11-27 20:34:31,753 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:34:33] 2025-11-27 20:34:31,753 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:34:33] 2025-11-27 20:34:31,753 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:34:33] 2025-11-27 20:34:31,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:34:33] 2025-11-27 20:34:31,753 | INFO     | [monitor] control thread has ended
[2025-11-27 15:34:33] 2025-11-27 20:34:31,860 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:34:33] 2025-11-27 20:34:31,871 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:34:33] 2025-11-27 20:34:31,873 [wrapper] pilotpid: 2589198
[2025-11-27 15:34:33] 2025-11-27 20:34:31,875 [wrapper] Pilot exit status: 0
[2025-11-27 15:34:33] 2025-11-27 20:34:31,937 [wrapper] pandaids: 6898215695
[2025-11-27 15:34:33] 2025-11-27 20:34:32,272 [wrapper] cleanup supervisor_pilot 3528682 2589199
[2025-11-27 15:34:33] 2025-11-27 20:34:32,305 [wrapper] Test setup, not cleaning
[2025-11-27 15:34:33] 2025-11-27 20:34:32,340 [wrapper] apfmon messages muted
[2025-11-27 15:34:33] 2025-11-27 20:34:32,409 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:34:33] 2025-11-27 20:34:32,426 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:34:33]  *** Error codes and diagnostics ***
[2025-11-27 15:34:33]     "exeErrorCode": 0,
[2025-11-27 15:34:33]     "exeErrorDiag": "",
[2025-11-27 15:34:33]     "pilotErrorCode": 0,
[2025-11-27 15:34:33]     "pilotErrorDiag": "",
[2025-11-27 15:34:33]  *** Listing of results directory ***
[2025-11-27 15:34:33] total 1304024
[2025-11-27 15:34:33] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 08:40 pilot3.tar.gz
[2025-11-27 15:34:33] -rwx------. 1 boincer umatlas     36292 Nov 26 08:52 runpilot2-wrapper.sh
[2025-11-27 15:34:33] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 08:52 queuedata.json
[2025-11-27 15:34:33] -rw-r--r--. 1 boincer umatlas       100 Nov 27 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:34:33] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 05:14 run_atlas
[2025-11-27 15:34:33] -rw-r--r--. 1 boincer umatlas       105 Nov 27 05:14 job.xml
[2025-11-27 15:34:33] -rw-r--r--. 2 boincer umatlas 409842792 Nov 27 05:14 EVNT.47483658._002511.pool.root.1
[2025-11-27 15:34:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:14 start_atlas.sh
[2025-11-27 15:34:33] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 05:14 shared
[2025-11-27 15:34:33] -rw-r--r--. 2 boincer umatlas    590101 Nov 27 05:14 input.tar.gz
[2025-11-27 15:34:33] -rw-r--r--. 1 boincer umatlas         0 Nov 27 05:14 boinc_lockfile
[2025-11-27 15:34:33] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 05:14 pandaJob.out
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas        57 Nov 27 05:14 setup.sh.local
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas    991564 Nov 27 05:16 agis_schedconf.cvmfs.json
[2025-11-27 15:34:33] drwx------. 5 boincer umatlas      4096 Nov 27 05:16 pilot3
[2025-11-27 15:34:33] -rw-r--r--. 1 boincer umatlas       533 Nov 27 15:14 boinc_task_state.xml
[2025-11-27 15:34:33] -rw-r--r--. 1 boincer umatlas      7173 Nov 27 15:30 init_data.xml
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas 908998759 Nov 27 15:32 HITS.47556161._004937.pool.root.1
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas      1053 Nov 27 15:33 memory_monitor_summary.json
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas   1516240 Nov 27 15:33 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas   1816266 Nov 27 15:33 log.47556161._004937.job.log.tgz.1
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas      8574 Nov 27 15:33 heartbeat.json
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas        95 Nov 27 15:34 pilot_heartbeat.json
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas       823 Nov 27 15:34 pilotlog.txt
[2025-11-27 15:34:33] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 15:34 boinc_mmap_file
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas   4463747 Nov 27 15:34 log.47556161._004937.job.log.1
[2025-11-27 15:34:33] -rw-r--r--. 1 boincer umatlas        29 Nov 27 15:34 wrapper_checkpoint.txt
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas       353 Nov 27 15:34 output.list
[2025-11-27 15:34:33] -rw-r--r--. 1 boincer umatlas       620 Nov 27 15:34 runtime_log
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas   6297600 Nov 27 15:34 result.tar.gz
[2025-11-27 15:34:33] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 15:34 runtime_log.err
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas       658 Nov 27 15:34 j3dKDmF8Ui8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8wJKDmJfVmIn.diag
[2025-11-27 15:34:33] -rw-r--r--. 1 boincer umatlas     20517 Nov 27 15:34 stderr.txt
[2025-11-27 15:34:33] HITS file was successfully produced:
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas 908998759 Nov 27 15:32 shared/HITS.pool.root.1
[2025-11-27 15:34:33]  *** Contents of shared directory: ***
[2025-11-27 15:34:33] total 1294692
[2025-11-27 15:34:33] -rw-r--r--. 2 boincer umatlas 409842792 Nov 27 05:14 ATLAS.root_0
[2025-11-27 15:34:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:14 start_atlas.sh
[2025-11-27 15:34:33] -rw-r--r--. 2 boincer umatlas    590101 Nov 27 05:14 input.tar.gz
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas 908998759 Nov 27 15:32 HITS.pool.root.1
[2025-11-27 15:34:33] -rw-------. 1 boincer umatlas   6297600 Nov 27 15:34 result.tar.gz
15:34:55 (2567447): run_atlas exited; CPU time 139665.458770
15:34:55 (2567447): called boinc_finish(0)

</stderr_txt>
]]>

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