Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:08:19 (5931): wrapper (7.7.26015): starting
05:08:19 (5931): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 05:08:19] Arguments: --nthreads 8
[2025-11-27 05:08:19] Threads: 8
[2025-11-27 05:08:19] Checking for CVMFS
[2025-11-27 05:08:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:08:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:08:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:08:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:08:19] 2.11.2.0 2831 44354 85828 153358 2 82 19071915 20275200 1 130560 0 6320624 99.678 2829674 25286 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 05:08:19] CVMFS is ok
[2025-11-27 05:08:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:08:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:08:19] Further information can be found at the LHC@home message board.
[2025-11-27 05:08:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:08:19] Checking for apptainer binary...
[2025-11-27 05:08:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:08:19] Running /usr/bin/apptainer --version
[2025-11-27 05:08:19] apptainer version 1.3.2-1.el7
[2025-11-27 05:08:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:08:21] c-204-31.aglt2.org
[2025-11-27 05:08:21] apptainer works
[2025-11-27 05:08:21] Set ATHENA_PROC_NUMBER=8
[2025-11-27 05:08:21] Set ATHENA_CORE_NUMBER=8
[2025-11-27 05:08:21] Starting ATLAS job with PandaID=6892543840
[2025-11-27 05:08:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:42:01]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:42:01] 2025-11-27 22:41:26,775 | INFO     | PID=9734 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 17:42:01] 2025-11-27 22:41:27,775 | INFO     | time since job start (45168s) is within the limit (172800.0s)
[2025-11-27 17:42:01] 2025-11-27 22:41:28,611 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 17:42:01] 2025-11-27 22:41:28,614 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-11-27 17:42:01] 2025-11-27 22:41:28,616 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6892543840/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 17:42:01] 2025-11-27 22:41:28,617 | INFO     | extracted standard info from prmon json
[2025-11-27 17:42:01] 2025-11-27 22:41:28,617 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:42:01] 2025-11-27 22:41:28,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:42:01] 2025-11-27 22:41:28,630 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:42:01] 2025-11-27 22:41:28,631 | INFO     | sum of square deviations: 125653580489.21478
[2025-11-27 17:42:01] 2025-11-27 22:41:28,642 | INFO     | sum of deviations: 883041061717.062
[2025-11-27 17:42:01] 2025-11-27 22:41:28,642 | INFO     | monitor loop #3309: job 0:6892543840 is in state 'finished'
[2025-11-27 17:42:01] 2025-11-27 22:41:28,643 | INFO     | mean x: 1764260692.1635134
[2025-11-27 17:42:01] 2025-11-27 22:41:28,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:42:01] 2025-11-27 22:41:28,643 | INFO     | mean y: 3193057.0986486487
[2025-11-27 17:42:01] 2025-11-27 22:41:28,644 | INFO     | intersect: -12395296732.75233
[2025-11-27 17:42:01] 2025-11-27 22:41:28,644 | INFO     | chi2: 6.301954123892953
[2025-11-27 17:42:01] 2025-11-27 22:41:28,645 | INFO     | sum of square deviations: 123123788363.66536
[2025-11-27 17:42:01] 2025-11-27 22:41:28,657 | INFO     | sum of deviations: 1139093246304.166
[2025-11-27 17:42:01] 2025-11-27 22:41:28,657 | INFO     | mean x: 1764260539.665306
[2025-11-27 17:42:01] 2025-11-27 22:41:28,658 | INFO     | mean y: 3208487.167346939
[2025-11-27 17:42:01] 2025-11-27 22:41:28,658 | INFO     | intersect: -16319041600.832352
[2025-11-27 17:42:01] 2025-11-27 22:41:28,658 | INFO     | chi2: 3.5109860437059854
[2025-11-27 17:42:01] 2025-11-27 22:41:28,659 | INFO     | current chi2=3.5109860437059854 (change=44.287343660681586 %)
[2025-11-27 17:42:01] 2025-11-27 22:41:28,660 | INFO     | sum of square deviations: 120628272108.93716
[2025-11-27 17:42:01] 2025-11-27 22:41:28,680 | INFO     | sum of deviations: 1266696769913.9565
[2025-11-27 17:42:01] 2025-11-27 22:41:28,681 | INFO     | mean x: 1764260387.169863
[2025-11-27 17:42:01] 2025-11-27 22:41:28,681 | INFO     | mean y: 3216280.6616438357
[2025-11-27 17:42:01] 2025-11-27 22:41:28,681 | INFO     | intersect: -18522979068.443752
[2025-11-27 17:42:01] 2025-11-27 22:41:28,682 | INFO     | chi2: 2.7191475663378673
[2025-11-27 17:42:01] 2025-11-27 22:41:28,682 | INFO     | current chi2=2.7191475663378673 (change=22.553165051385427 %)
[2025-11-27 17:42:01] 2025-11-27 22:41:28,682 | INFO     | right removable region: 729
[2025-11-27 17:42:01] 2025-11-27 22:41:28,683 | INFO     | sum of square deviations: 123123578646.99866
[2025-11-27 17:42:01] 2025-11-27 22:41:28,702 | INFO     | sum of deviations: 650989737030.2487
[2025-11-27 17:42:01] 2025-11-27 22:41:28,702 | INFO     | mean x: 1764260844.6680272
[2025-11-27 17:42:01] 2025-11-27 22:41:28,702 | INFO     | mean y: 3207021.419047619
[2025-11-27 17:42:01] 2025-11-27 22:41:28,702 | INFO     | intersect: -9324946984.046097
[2025-11-27 17:42:01] 2025-11-27 22:41:28,703 | INFO     | chi2: 3.888974489260525
[2025-11-27 17:42:01] 2025-11-27 22:41:28,703 | INFO     | current chi2=3.888974489260525 (change=38.28938750099692 %)
[2025-11-27 17:42:01] 2025-11-27 22:41:28,704 | INFO     | sum of square deviations: 120627852796.9372
[2025-11-27 17:42:01] 2025-11-27 22:41:28,715 | INFO     | sum of deviations: 587406449193.1306
[2025-11-27 17:42:01] 2025-11-27 22:41:28,715 | INFO     | mean x: 1764260997.169863
[2025-11-27 17:42:01] 2025-11-27 22:41:28,715 | INFO     | mean y: 3210906.5150684933
[2025-11-27 17:42:01] 2025-11-27 22:41:28,715 | INFO     | intersect: -8587991405.127125
[2025-11-27 17:42:01] 2025-11-27 22:41:28,716 | INFO     | chi2: 3.79299161520374
[2025-11-27 17:42:01] 2025-11-27 22:41:28,716 | INFO     | current chi2=3.79299161520374 (change=2.468076721044158 %)
[2025-11-27 17:42:01] 2025-11-27 22:41:28,717 | INFO     | left removable region: 20
[2025-11-27 17:42:01] 2025-11-27 22:41:28,717 | INFO     | sum of square deviations: 110514289132.3216
[2025-11-27 17:42:01] 2025-11-27 22:41:28,730 | INFO     | sum of deviations: 889073285620.4851
[2025-11-27 17:42:01] 2025-11-27 22:41:28,730 | INFO     | mean x: 1764260966.6798308
[2025-11-27 17:42:01] 2025-11-27 22:41:28,730 | INFO     | mean y: 3240779.6981664314
[2025-11-27 17:42:01] 2025-11-27 22:41:28,730 | INFO     | intersect: -14190012478.800709
[2025-11-27 17:42:01] 2025-11-27 22:41:28,731 | INFO     | chi2: 0.11052653803850547
[2025-11-27 17:42:01] 2025-11-27 22:41:28,731 | INFO     | current memory leak: 8.04 B/s (using 709 data points, chi2=0.11)
[2025-11-27 17:42:01] 2025-11-27 22:41:28,732 | INFO     | could have reported an average CPU frequency of 2184 MHz (28 samples)
[2025-11-27 17:42:01] 2025-11-27 22:41:28,732 | INFO     | ..............................
[2025-11-27 17:42:01] 2025-11-27 22:41:28,732 | INFO     | . Timing measurements:
[2025-11-27 17:42:01] 2025-11-27 22:41:28,732 | INFO     | . get job = 0 s
[2025-11-27 17:42:01] 2025-11-27 22:41:28,732 | INFO     | . initial setup = 2 s
[2025-11-27 17:42:01] 2025-11-27 22:41:28,732 | INFO     | . payload setup = 9 s
[2025-11-27 17:42:01] 2025-11-27 22:41:28,732 | INFO     | . stage-in = 0 s
[2025-11-27 17:42:01] 2025-11-27 22:41:28,732 | INFO     | . payload execution = 45124 s
[2025-11-27 17:42:01] 2025-11-27 22:41:28,733 | INFO     | . stage-out = 3 s
[2025-11-27 17:42:01] 2025-11-27 22:41:28,733 | INFO     | . log creation = 0 s
[2025-11-27 17:42:01] 2025-11-27 22:41:28,733 | INFO     | ..............................
[2025-11-27 17:42:01] 2025-11-27 22:41:28,821 | INFO     | 
[2025-11-27 17:42:01] 2025-11-27 22:41:28,822 | INFO     | job summary report
[2025-11-27 17:42:01] 2025-11-27 22:41:28,822 | INFO     | --------------------------------------------------
[2025-11-27 17:42:01] 2025-11-27 22:41:28,822 | INFO     | PanDA job id: 6892543840
[2025-11-27 17:42:01] 2025-11-27 22:41:28,824 | INFO     | task id: 47493029
[2025-11-27 17:42:01] 2025-11-27 22:41:28,825 | INFO     | errors: (none)
[2025-11-27 17:42:01] 2025-11-27 22:41:28,825 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:42:01] 2025-11-27 22:41:28,825 | INFO     | pilot state: finished 
[2025-11-27 17:42:01] 2025-11-27 22:41:28,825 | INFO     | transexitcode: 0
[2025-11-27 17:42:01] 2025-11-27 22:41:28,825 | INFO     | exeerrorcode: 0
[2025-11-27 17:42:01] 2025-11-27 22:41:28,826 | INFO     | exeerrordiag: 
[2025-11-27 17:42:01] 2025-11-27 22:41:28,826 | INFO     | exitcode: 0
[2025-11-27 17:42:01] 2025-11-27 22:41:28,826 | INFO     | exitmsg: OK
[2025-11-27 17:42:01] 2025-11-27 22:41:28,826 | INFO     | cpuconsumptiontime: 348756 s
[2025-11-27 17:42:01] 2025-11-27 22:41:28,827 | INFO     | nevents: 1000
[2025-11-27 17:42:01] 2025-11-27 22:41:28,827 | INFO     | neventsw: 0
[2025-11-27 17:42:01] 2025-11-27 22:41:28,827 | INFO     | pid: 16164
[2025-11-27 17:42:01] 2025-11-27 22:41:28,827 | INFO     | pgrp: 16164
[2025-11-27 17:42:01] 2025-11-27 22:41:28,827 | INFO     | corecount: 8
[2025-11-27 17:42:01] 2025-11-27 22:41:28,827 | INFO     | event service: False
[2025-11-27 17:42:01] 2025-11-27 22:41:28,828 | INFO     | sizes: {0: 2284304, 1: 2284332, 6: 2284594, 11: 2284622, 45137: 2330566, 45138: 2330565, 45143: 2339743, 45145: 2339827, 45152: 2340073}
[2025-11-27 17:42:01] 2025-11-27 22:41:28,828 | INFO     | --------------------------------------------------
[2025-11-27 17:42:01] 2025-11-27 22:41:28,828 | INFO     | 
[2025-11-27 17:42:01] 2025-11-27 22:41:28,828 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 17:42:01] 2025-11-27 22:41:28,856 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,857 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,857 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,857 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,857 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,857 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,859 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,860 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,860 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,860 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:42:01] 2025-11-27 22:41:28,860 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,860 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:42:01] 2025-11-27 22:41:28,861 | INFO     | job 6892543840 has completed (purged errors)
[2025-11-27 17:42:01] 2025-11-27 22:41:28,861 | INFO     | overall cleanup function is called
[2025-11-27 17:42:01] 2025-11-27 22:41:29,876 | INFO     | --- collectZombieJob: --- 10, [16164]
[2025-11-27 17:42:01] 2025-11-27 22:41:29,876 | INFO     | zombie collector waiting for pid 16164
[2025-11-27 17:42:01] 2025-11-27 22:41:29,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:42:01] 2025-11-27 22:41:29,877 | INFO     | collected zombie processes
[2025-11-27 17:42:01] 2025-11-27 22:41:29,877 | INFO     | will attempt to kill all subprocesses of pid=16164
[2025-11-27 17:42:01] 2025-11-27 22:41:29,973 | INFO     | process IDs to be killed: [16164] (in reverse order)
[2025-11-27 17:42:01] 2025-11-27 22:41:30,031 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:42:01] 2025-11-27 22:41:30,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:42:01] 2025-11-27 22:41:30,036 | INFO     | did not find any defunct processes belonging to 16164
[2025-11-27 17:42:01] 2025-11-27 22:41:30,040 | INFO     | did not find any defunct processes belonging to 16164
[2025-11-27 17:42:01] 2025-11-27 22:41:30,043 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:42:01] 2025-11-27 22:41:30,043 | INFO     | ready for new job
[2025-11-27 17:42:01] 2025-11-27 22:41:30,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:42:01] 2025-11-27 22:41:30,047 | INFO     | ***************************************
[2025-11-27 17:42:01] 2025-11-27 22:41:30,047 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:42:01] 2025-11-27 22:41:30,048 | INFO     | ***************************************
[2025-11-27 17:42:01] 2025-11-27 22:41:30,048 | INFO     | 
[2025-11-27 17:42:01] 2025-11-27 22:41:30,048 | INFO     | architecture information:
[2025-11-27 17:42:01] 2025-11-27 22:41:30,049 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:42:01] 2025-11-27 22:41:30,069 | INFO     | cat /etc/os-release:
[2025-11-27 17:42:01] NAME="CentOS Linux"
[2025-11-27 17:42:01] VERSION="7 (Core)"
[2025-11-27 17:42:01] ID="centos"
[2025-11-27 17:42:01] ID_LIKE="rhel fedora"
[2025-11-27 17:42:01] VERSION_ID="7"
[2025-11-27 17:42:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:42:01] ANSI_COLOR="0;31"
[2025-11-27 17:42:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:42:01] HOME_URL="https://www.centos.org/"
[2025-11-27 17:42:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:42:01] 
[2025-11-27 17:42:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:42:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:42:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:42:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:42:01] 
[2025-11-27 17:42:01] 2025-11-27 22:41:30,070 | INFO     | ***************************************
[2025-11-27 17:42:01] 2025-11-27 22:41:30,573 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 17:42:01] 2025-11-27 22:41:30,593 | INFO     | sufficient remaining disk space (17429430272 B)
[2025-11-27 17:42:01] 2025-11-27 22:41:30,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:42:01] 2025-11-27 22:41:30,594 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:42:01] 2025-11-27 22:41:30,595 | INFO     | update_server=False
[2025-11-27 17:42:01] 2025-11-27 22:41:30,595 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:42:01] 2025-11-27 22:41:30,595 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:42:01] 2025-11-27 22:41:30,596 | INFO     | aborting loop
[2025-11-27 17:42:01] 2025-11-27 22:41:30,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:42:01] 2025-11-27 22:41:30,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:42:01] 2025-11-27 22:41:30,915 | INFO     | all data control threads have been joined
[2025-11-27 17:42:01] 2025-11-27 22:41:31,598 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:31,601 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:31,604 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:31,662 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:31,662 | INFO     | all job control threads have been joined
[2025-11-27 17:42:01] 2025-11-27 22:41:31,740 | INFO     | all payload control threads have been joined
[2025-11-27 17:42:01] 2025-11-27 22:41:31,863 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:31,920 | INFO     | [data] control thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:32,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:42:01] 2025-11-27 22:41:32,562 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:32,592 | INFO     | [job] validate thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:32,602 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:32,667 | INFO     | [job] control thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:32,718 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:32,745 | INFO     | [payload] control thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:32,827 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:32,832 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:32,870 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:36,356 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:42:01] 2025-11-27 22:41:53,995 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:42:01] 2025-11-27 22:41:54,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407904544576)>', '<ExcThread(monitor, started 140406499043072)>']
[2025-11-27 17:42:01] 2025-11-27 22:41:59,908 | INFO     | all workflow threads have been joined
[2025-11-27 17:42:01] 2025-11-27 22:41:59,908 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:42:01] 2025-11-27 22:41:59,909 | INFO     | traces error code: 0
[2025-11-27 17:42:01] 2025-11-27 22:41:59,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:42:01] 2025-11-27 22:42:00,907 | INFO     | PID=9734 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 17:42:01] 2025-11-27 22:42:00,907 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:42:01] 2025-11-27 22:42:00,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:42:01] 2025-11-27 22:42:00,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:42:01] 2025-11-27 22:42:00,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:42:01] 2025-11-27 22:42:00,908 | INFO     | [monitor] control thread has ended
[2025-11-27 17:42:01] 2025-11-27 22:42:01,038 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:42:01] 2025-11-27 22:42:01,043 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:42:01] 2025-11-27 22:42:01,047 [wrapper] pilotpid: 9734
[2025-11-27 17:42:01] 2025-11-27 22:42:01,053 [wrapper] Pilot exit status: 0
[2025-11-27 17:42:01] 2025-11-27 22:42:01,072 [wrapper] pandaids: 6892543840
[2025-11-27 17:42:01] 2025-11-27 22:42:01,118 [wrapper] cleanup supervisor_pilot  6423 9735
[2025-11-27 17:42:01] 2025-11-27 22:42:01,124 [wrapper] Test setup, not cleaning
[2025-11-27 17:42:01] 2025-11-27 22:42:01,129 [wrapper] apfmon messages muted
[2025-11-27 17:42:01] 2025-11-27 22:42:01,134 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:42:01] 2025-11-27 22:42:01,139 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:42:01]  *** Error codes and diagnostics ***
[2025-11-27 17:42:01]     "exeErrorCode": 0,
[2025-11-27 17:42:01]     "exeErrorDiag": "",
[2025-11-27 17:42:01]     "pilotErrorCode": 0,
[2025-11-27 17:42:01]     "pilotErrorDiag": "",
[2025-11-27 17:42:01]  *** Listing of results directory ***
[2025-11-27 17:42:01] total 1322924
[2025-11-27 17:42:01] -rwx------ 1 boincer umatlas     36292 Nov 19 03:00 runpilot2-wrapper.sh
[2025-11-27 17:42:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 03:00 queuedata.json
[2025-11-27 17:42:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 03:00 pilot3.tar.gz
[2025-11-27 17:42:01] -rw-r--r-- 1 boincer umatlas       100 Nov 27 05:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:42:01] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 05:08 run_atlas
[2025-11-27 17:42:01] -rw-r--r-- 1 boincer umatlas       105 Nov 27 05:08 job.xml
[2025-11-27 17:42:01] -rw-r--r-- 2 boincer umatlas 410412604 Nov 27 05:08 EVNT.47493027._000262.pool.root.1
[2025-11-27 17:42:01] -rw-r--r-- 2 boincer umatlas     15120 Nov 27 05:08 start_atlas.sh
[2025-11-27 17:42:01] drwxrwx--x 2 boincer umatlas      4096 Nov 27 05:08 shared
[2025-11-27 17:42:01] -rw-r--r-- 2 boincer umatlas    590090 Nov 27 05:08 input.tar.gz
[2025-11-27 17:42:01] -rw-r--r-- 1 boincer umatlas         0 Nov 27 05:08 boinc_lockfile
[2025-11-27 17:42:01] -rw-r--r-- 1 boincer umatlas      2773 Nov 27 05:08 pandaJob.out
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas    991551 Nov 27 05:08 agis_schedconf.cvmfs.json
[2025-11-27 17:42:01] drwx------ 5 boincer umatlas      4096 Nov 27 05:08 pilot3
[2025-11-27 17:42:01] -rw-r--r-- 1 boincer umatlas       533 Nov 27 17:29 boinc_task_state.xml
[2025-11-27 17:42:01] -rw-r--r-- 1 boincer umatlas      5913 Nov 27 17:37 init_data.xml
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas 923937511 Nov 27 17:40 HITS.47493029._002579.pool.root.1
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas        95 Nov 27 17:41 pilot_heartbeat.json
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas      1064 Nov 27 17:41 memory_monitor_summary.json
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas   1516240 Nov 27 17:41 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas   1987345 Nov 27 17:41 log.47493029._002579.job.log.tgz.1
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas      8660 Nov 27 17:41 heartbeat.json
[2025-11-27 17:42:01] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 17:41 boinc_mmap_file
[2025-11-27 17:42:01] -rw-r--r-- 1 boincer umatlas        29 Nov 27 17:41 wrapper_checkpoint.txt
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas       744 Nov 27 17:42 pilotlog.txt
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas   6219789 Nov 27 17:42 log.47493029._002579.job.log.1
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas       353 Nov 27 17:42 output.list
[2025-11-27 17:42:01] -rw-r--r-- 1 boincer umatlas       620 Nov 27 17:42 runtime_log
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas   8222720 Nov 27 17:42 result.tar.gz
[2025-11-27 17:42:01] -rw-r--r-- 1 boincer umatlas      8704 Nov 27 17:42 runtime_log.err
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas       668 Nov 27 17:42 GQ1KDm2Hsf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3xGKDmqtpBjn.diag
[2025-11-27 17:42:01] -rw-r--r-- 1 boincer umatlas     21424 Nov 27 17:42 stderr.txt
[2025-11-27 17:42:01] HITS file was successfully produced:
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas 923937511 Nov 27 17:40 shared/HITS.pool.root.1
[2025-11-27 17:42:01]  *** Contents of shared directory: ***
[2025-11-27 17:42:01] total 1311712
[2025-11-27 17:42:01] -rw-r--r-- 2 boincer umatlas 410412604 Nov 27 05:08 ATLAS.root_0
[2025-11-27 17:42:01] -rw-r--r-- 2 boincer umatlas     15120 Nov 27 05:08 start_atlas.sh
[2025-11-27 17:42:01] -rw-r--r-- 2 boincer umatlas    590090 Nov 27 05:08 input.tar.gz
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas 923937511 Nov 27 17:40 HITS.pool.root.1
[2025-11-27 17:42:01] -rw------- 1 boincer umatlas   8222720 Nov 27 17:42 result.tar.gz
17:42:02 (5931): run_atlas exited; CPU time 346510.704647
17:42:02 (5931): called boinc_finish(0)

</stderr_txt>
]]>

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