Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:47:22 (2435048): wrapper (7.7.26015): starting
05:47:22 (2435048): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 05:47:22] Arguments: --nthreads 8
[2025-11-27 05:47:22] Threads: 8
[2025-11-27 05:47:22] Checking for CVMFS
[2025-11-27 05:47:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:47:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:47:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:47:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:47:22] 2.13.3.0 11460 31390 257868 153360 3 600 32059823 32935937 64319 16776704 0 407983649 99.727 274850964 35215 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 05:47:22] CVMFS is ok
[2025-11-27 05:47:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:47:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:47:22] Further information can be found at the LHC@home message board.
[2025-11-27 05:47:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:47:22] Checking for apptainer binary...
[2025-11-27 05:47:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:47:23] Running /usr/bin/apptainer --version
[2025-11-27 05:47:23] apptainer version 1.4.4-1.el9
[2025-11-27 05:47:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:47:23] c7-3-34.aglt2.org
[2025-11-27 05:47:23] apptainer works
[2025-11-27 05:47:23] Set ATHENA_PROC_NUMBER=8
[2025-11-27 05:47:23] Set ATHENA_CORE_NUMBER=8
[2025-11-27 05:47:23] Starting ATLAS job with PandaID=6898215761
[2025-11-27 05:47:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:05:24]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:05:24] 2025-11-27 23:04:49,656 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:05:24] 2025-11-27 23:04:49,988 | INFO     | PID=2439490 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 18:05:24] 2025-11-27 23:04:49,988 | INFO     | .. there are 96 such processes running
[2025-11-27 18:05:24] 2025-11-27 23:04:50,154 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 18:05:24] 2025-11-27 23:04:50,163 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3326.022125000001
[2025-11-27 18:05:24] 2025-11-27 23:04:50,187 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6898215761/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 18:05:24] 2025-11-27 23:04:50,188 | INFO     | extracted standard info from prmon json
[2025-11-27 18:05:24] 2025-11-27 23:04:50,188 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 18:05:24] 2025-11-27 23:04:50,188 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 18:05:24] 2025-11-27 23:04:50,198 | INFO     | fitting pss+swap vs Time
[2025-11-27 18:05:24] 2025-11-27 23:04:50,198 | INFO     | sum of square deviations: 117676418527.9489
[2025-11-27 18:05:24] 2025-11-27 23:04:50,207 | INFO     | sum of deviations: 1071916906225.6376
[2025-11-27 18:05:24] 2025-11-27 23:04:50,207 | INFO     | mean x: 1764262585.435083
[2025-11-27 18:05:24] 2025-11-27 23:04:50,208 | INFO     | mean y: 2881978.258287293
[2025-11-27 18:05:24] 2025-11-27 23:04:50,208 | INFO     | intersect: -16067822042.191317
[2025-11-27 18:05:24] 2025-11-27 23:04:50,208 | INFO     | chi2: 8.579715723697339
[2025-11-27 18:05:24] 2025-11-27 23:04:50,209 | INFO     | sum of square deviations: 115255572509.0966
[2025-11-27 18:05:24] 2025-11-27 23:04:50,220 | INFO     | sum of deviations: 1325447008071.8054
[2025-11-27 18:05:24] 2025-11-27 23:04:50,220 | INFO     | mean x: 1764262432.9485397
[2025-11-27 18:05:24] 2025-11-27 23:04:50,220 | INFO     | mean y: 2897953.6703755218
[2025-11-27 18:05:24] 2025-11-27 23:04:50,220 | INFO     | intersect: -20286241324.350773
[2025-11-27 18:05:24] 2025-11-27 23:04:50,221 | INFO     | chi2: 5.158908028868435
[2025-11-27 18:05:24] 2025-11-27 23:04:50,221 | INFO     | current chi2=5.158908028868435 (change=39.87087457199273 %)
[2025-11-27 18:05:24] 2025-11-27 23:04:50,222 | INFO     | sum of square deviations: 112867863308.88089
[2025-11-27 18:05:24] 2025-11-27 23:04:50,230 | INFO     | sum of deviations: 1445213978901.643
[2025-11-27 18:05:24] 2025-11-27 23:04:50,230 | INFO     | mean x: 1764262280.452381
[2025-11-27 18:05:24] 2025-11-27 23:04:50,231 | INFO     | mean y: 2905584.2983193276
[2025-11-27 18:05:24] 2025-11-27 23:04:50,231 | INFO     | intersect: -22587550506.652134
[2025-11-27 18:05:24] 2025-11-27 23:04:50,231 | INFO     | chi2: 3.9828209319665233
[2025-11-27 18:05:24] 2025-11-27 23:04:50,231 | INFO     | current chi2=3.9828209319665233 (change=22.797209997168274 %)
[2025-11-27 18:05:24] 2025-11-27 23:04:50,231 | INFO     | right removable region: 713
[2025-11-27 18:05:24] 2025-11-27 23:04:50,232 | INFO     | sum of square deviations: 115254717899.0966
[2025-11-27 18:05:24] 2025-11-27 23:04:50,241 | INFO     | sum of deviations: 808678116630.2856
[2025-11-27 18:05:24] 2025-11-27 23:04:50,241 | INFO     | mean x: 1764262737.9485397
[2025-11-27 18:05:24] 2025-11-27 23:04:50,241 | INFO     | mean y: 2898550.223922114
[2025-11-27 18:05:24] 2025-11-27 23:04:50,241 | INFO     | intersect: -12375949744.85658
[2025-11-27 18:05:24] 2025-11-27 23:04:50,242 | INFO     | chi2: 5.212405207339321
[2025-11-27 18:05:24] 2025-11-27 23:04:50,242 | INFO     | current chi2=5.212405207339321 (change=39.24734367430662 %)
[2025-11-27 18:05:24] 2025-11-27 23:04:50,243 | INFO     | sum of square deviations: 112866634715.15424
[2025-11-27 18:05:24] 2025-11-27 23:04:50,263 | INFO     | sum of deviations: 736313950149.8119
[2025-11-27 18:05:24] 2025-11-27 23:04:50,263 | INFO     | mean x: 1764262890.4565825
[2025-11-27 18:05:24] 2025-11-27 23:04:50,263 | INFO     | mean y: 2903161.816526611
[2025-11-27 18:05:24] 2025-11-27 23:04:50,263 | INFO     | intersect: -11506710651.453232
[2025-11-27 18:05:24] 2025-11-27 23:04:50,264 | INFO     | chi2: 4.929824974042646
[2025-11-27 18:05:24] 2025-11-27 23:04:50,264 | INFO     | current chi2=4.929824974042646 (change=5.421302106344088 %)
[2025-11-27 18:05:24] 2025-11-27 23:04:50,264 | INFO     | left removable region: 20
[2025-11-27 18:05:24] 2025-11-27 23:04:50,265 | INFO     | sum of square deviations: 103197906681.79211
[2025-11-27 18:05:24] 2025-11-27 23:04:50,273 | INFO     | sum of deviations: 1050032157962.9451
[2025-11-27 18:05:24] 2025-11-27 23:04:50,274 | INFO     | mean x: 1764262859.982684
[2025-11-27 18:05:24] 2025-11-27 23:04:50,274 | INFO     | mean y: 2930177.245310245
[2025-11-27 18:05:24] 2025-11-27 23:04:50,274 | INFO     | intersect: -17948332572.625458
[2025-11-27 18:05:24] 2025-11-27 23:04:50,274 | INFO     | chi2: 0.25014704992174097
[2025-11-27 18:05:24] 2025-11-27 23:04:50,275 | INFO     | current memory leak: 10.17 B/s (using 693 data points, chi2=0.25)
[2025-11-27 18:05:24] 2025-11-27 23:04:50,275 | INFO     | could have reported an average CPU frequency of 3251 MHz (28 samples)
[2025-11-27 18:05:24] 2025-11-27 23:04:50,275 | INFO     | ..............................
[2025-11-27 18:05:24] 2025-11-27 23:04:50,275 | INFO     | . Timing measurements:
[2025-11-27 18:05:24] 2025-11-27 23:04:50,275 | INFO     | . get job = 0 s
[2025-11-27 18:05:24] 2025-11-27 23:04:50,276 | INFO     | . initial setup = 2 s
[2025-11-27 18:05:24] 2025-11-27 23:04:50,276 | INFO     | . payload setup = 19 s
[2025-11-27 18:05:24] 2025-11-27 23:04:50,276 | INFO     | . stage-in = 0 s
[2025-11-27 18:05:24] 2025-11-27 23:04:50,276 | INFO     | . payload execution = 44144 s
[2025-11-27 18:05:24] 2025-11-27 23:04:50,276 | INFO     | . stage-out = 4 s
[2025-11-27 18:05:24] 2025-11-27 23:04:50,276 | INFO     | . log creation = 1 s
[2025-11-27 18:05:24] 2025-11-27 23:04:50,276 | INFO     | ..............................
[2025-11-27 18:05:24] 2025-11-27 23:04:50,435 | INFO     | 
[2025-11-27 18:05:24] 2025-11-27 23:04:50,436 | INFO     | job summary report
[2025-11-27 18:05:24] 2025-11-27 23:04:50,436 | INFO     | --------------------------------------------------
[2025-11-27 18:05:24] 2025-11-27 23:04:50,436 | INFO     | PanDA job id: 6898215761
[2025-11-27 18:05:24] 2025-11-27 23:04:50,436 | INFO     | task id: 47556173
[2025-11-27 18:05:24] 2025-11-27 23:04:50,436 | INFO     | errors: (none)
[2025-11-27 18:05:24] 2025-11-27 23:04:50,436 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 18:05:24] 2025-11-27 23:04:50,436 | INFO     | pilot state: finished 
[2025-11-27 18:05:24] 2025-11-27 23:04:50,436 | INFO     | transexitcode: 0
[2025-11-27 18:05:24] 2025-11-27 23:04:50,436 | INFO     | exeerrorcode: 0
[2025-11-27 18:05:24] 2025-11-27 23:04:50,436 | INFO     | exeerrordiag: 
[2025-11-27 18:05:24] 2025-11-27 23:04:50,436 | INFO     | exitcode: 0
[2025-11-27 18:05:24] 2025-11-27 23:04:50,436 | INFO     | exitmsg: OK
[2025-11-27 18:05:24] 2025-11-27 23:04:50,436 | INFO     | cpuconsumptiontime: 188201 s
[2025-11-27 18:05:24] 2025-11-27 23:04:50,437 | INFO     | nevents: 1000
[2025-11-27 18:05:24] 2025-11-27 23:04:50,437 | INFO     | neventsw: 0
[2025-11-27 18:05:24] 2025-11-27 23:04:50,437 | INFO     | pid: 2458421
[2025-11-27 18:05:24] 2025-11-27 23:04:50,437 | INFO     | pgrp: 2458421
[2025-11-27 18:05:24] 2025-11-27 23:04:50,437 | INFO     | corecount: 8
[2025-11-27 18:05:24] 2025-11-27 23:04:50,437 | INFO     | event service: False
[2025-11-27 18:05:24] 2025-11-27 23:04:50,437 | INFO     | sizes: {0: 2284315, 11: 2284605, 21: 2284605, 44167: 2330876, 44172: 2339870, 44176: 2339926, 44189: 2340300}
[2025-11-27 18:05:24] 2025-11-27 23:04:50,437 | INFO     | --------------------------------------------------
[2025-11-27 18:05:24] 2025-11-27 23:04:50,437 | INFO     | 
[2025-11-27 18:05:24] 2025-11-27 23:04:50,437 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 18:05:24] 2025-11-27 23:04:50,487 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,488 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,488 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,488 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,488 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,488 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,488 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,489 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,489 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,489 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,489 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,489 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,489 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,489 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,489 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,489 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,489 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,489 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 18:05:24] 2025-11-27 23:04:50,489 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,490 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 18:05:24] 2025-11-27 23:04:50,490 | INFO     | job 6898215761 has completed (purged errors)
[2025-11-27 18:05:24] 2025-11-27 23:04:50,490 | INFO     | overall cleanup function is called
[2025-11-27 18:05:24] 2025-11-27 23:04:51,507 | INFO     | --- collectZombieJob: --- 10, [2458421]
[2025-11-27 18:05:24] 2025-11-27 23:04:51,508 | INFO     | zombie collector waiting for pid 2458421
[2025-11-27 18:05:24] 2025-11-27 23:04:51,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 18:05:24] 2025-11-27 23:04:51,508 | INFO     | collected zombie processes
[2025-11-27 18:05:24] 2025-11-27 23:04:51,508 | INFO     | will attempt to kill all subprocesses of pid=2458421
[2025-11-27 18:05:24] 2025-11-27 23:04:52,385 | INFO     | process IDs to be killed: [2458421] (in reverse order)
[2025-11-27 18:05:24] 2025-11-27 23:04:53,122 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 18:05:24] 2025-11-27 23:04:53,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 18:05:24] 2025-11-27 23:04:53,155 | INFO     | did not find any defunct processes belonging to 2458421
[2025-11-27 18:05:24] 2025-11-27 23:04:53,189 | INFO     | did not find any defunct processes belonging to 2458421
[2025-11-27 18:05:24] 2025-11-27 23:04:53,190 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 18:05:24] 2025-11-27 23:04:53,191 | INFO     | ready for new job
[2025-11-27 18:05:24] 2025-11-27 23:04:53,191 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:05:24] 2025-11-27 23:04:53,193 | INFO     | ***************************************
[2025-11-27 18:05:24] 2025-11-27 23:04:53,193 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:05:24] 2025-11-27 23:04:53,193 | INFO     | ***************************************
[2025-11-27 18:05:24] 2025-11-27 23:04:53,194 | INFO     | 
[2025-11-27 18:05:24] 2025-11-27 23:04:53,198 | INFO     | architecture information:
[2025-11-27 18:05:24] 2025-11-27 23:04:53,199 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:05:24] 2025-11-27 23:04:53,262 | INFO     | cat /etc/os-release:
[2025-11-27 18:05:24] NAME="CentOS Linux"
[2025-11-27 18:05:24] VERSION="7 (Core)"
[2025-11-27 18:05:24] ID="centos"
[2025-11-27 18:05:24] ID_LIKE="rhel fedora"
[2025-11-27 18:05:24] VERSION_ID="7"
[2025-11-27 18:05:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:05:24] ANSI_COLOR="0;31"
[2025-11-27 18:05:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:05:24] HOME_URL="https://www.centos.org/"
[2025-11-27 18:05:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:05:24] 
[2025-11-27 18:05:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:05:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:05:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:05:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:05:24] 
[2025-11-27 18:05:24] 2025-11-27 23:04:53,262 | INFO     | ***************************************
[2025-11-27 18:05:24] 2025-11-27 23:04:53,766 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 18:05:24] 2025-11-27 23:04:53,808 | INFO     | sufficient remaining disk space (67589111808 B)
[2025-11-27 18:05:24] 2025-11-27 23:04:53,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:05:24] 2025-11-27 23:04:53,809 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:05:24] 2025-11-27 23:04:53,809 | INFO     | update_server=False
[2025-11-27 18:05:24] 2025-11-27 23:04:53,809 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:05:24] 2025-11-27 23:04:53,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:05:24] 2025-11-27 23:04:53,809 | INFO     | aborting loop
[2025-11-27 18:05:24] 2025-11-27 23:04:53,874 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:05:24] 2025-11-27 23:04:54,183 | INFO     | all payload control threads have been joined
[2025-11-27 18:05:24] 2025-11-27 23:04:54,431 | INFO     | all data control threads have been joined
[2025-11-27 18:05:24] 2025-11-27 23:04:54,601 | INFO     | all job control threads have been joined
[2025-11-27 18:05:24] 2025-11-27 23:04:54,814 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:54,815 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:55,019 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:55,189 | INFO     | [payload] control thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:55,284 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:55,366 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:05:24] 2025-11-27 23:04:55,436 | INFO     | [data] control thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:55,477 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:55,484 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:55,617 | INFO     | [job] control thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:55,852 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:55,888 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:55,895 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:56,223 | INFO     | [job] validate thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:56,297 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:56,375 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:04:56,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:05:24] 2025-11-27 23:05:00,512 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:05:24] 2025-11-27 23:05:04,215 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:05:24] 2025-11-27 23:05:06,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139804853020480)>', '<ExcThread(monitor, started 139804205381376)>']
[2025-11-27 18:05:24] 2025-11-27 23:05:11,110 | INFO     | all workflow threads have been joined
[2025-11-27 18:05:24] 2025-11-27 23:05:11,111 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:05:24] 2025-11-27 23:05:11,137 | INFO     | traces error code: 0
[2025-11-27 18:05:24] 2025-11-27 23:05:11,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:05:24] 2025-11-27 23:05:23,610 | INFO     | PID=2439490 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 18:05:24] 2025-11-27 23:05:23,610 | INFO     | .. there are 96 such processes running
[2025-11-27 18:05:24] 2025-11-27 23:05:23,611 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:05:24] 2025-11-27 23:05:23,611 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:05:24] 2025-11-27 23:05:23,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:05:24] 2025-11-27 23:05:23,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:05:24] 2025-11-27 23:05:23,611 | INFO     | [monitor] control thread has ended
[2025-11-27 18:05:24] 2025-11-27 23:05:23,958 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:05:24] 2025-11-27 23:05:23,983 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:05:24] 2025-11-27 23:05:23,993 [wrapper] pilotpid: 2439490
[2025-11-27 18:05:24] 2025-11-27 23:05:23,997 [wrapper] Pilot exit status: 0
[2025-11-27 18:05:24] 2025-11-27 23:05:24,022 [wrapper] pandaids: 6898215761
[2025-11-27 18:05:24] 2025-11-27 23:05:24,325 [wrapper] cleanup supervisor_pilot 3416984 2439491
[2025-11-27 18:05:24] 2025-11-27 23:05:24,328 [wrapper] Test setup, not cleaning
[2025-11-27 18:05:24] 2025-11-27 23:05:24,332 [wrapper] apfmon messages muted
[2025-11-27 18:05:24] 2025-11-27 23:05:24,334 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:05:24] 2025-11-27 23:05:24,342 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:05:24]  *** Error codes and diagnostics ***
[2025-11-27 18:05:24]     "exeErrorCode": 0,
[2025-11-27 18:05:24]     "exeErrorDiag": "",
[2025-11-27 18:05:24]     "pilotErrorCode": 0,
[2025-11-27 18:05:24]     "pilotErrorDiag": "",
[2025-11-27 18:05:24]  *** Listing of results directory ***
[2025-11-27 18:05:24] total 1312996
[2025-11-27 18:05:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 09:19 pilot3.tar.gz
[2025-11-27 18:05:24] -rwx------. 1 boincer umatlas     36292 Nov 26 09:21 runpilot2-wrapper.sh
[2025-11-27 18:05:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 09:21 queuedata.json
[2025-11-27 18:05:24] -rw-r--r--. 1 boincer umatlas       100 Nov 27 05:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:05:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 05:47 run_atlas
[2025-11-27 18:05:24] -rw-r--r--. 1 boincer umatlas       105 Nov 27 05:47 job.xml
[2025-11-27 18:05:24] -rw-r--r--. 2 boincer umatlas 408368431 Nov 27 05:47 EVNT.47483658._003183.pool.root.1
[2025-11-27 18:05:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:47 start_atlas.sh
[2025-11-27 18:05:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 05:47 shared
[2025-11-27 18:05:24] -rw-r--r--. 2 boincer umatlas    590098 Nov 27 05:47 input.tar.gz
[2025-11-27 18:05:24] -rw-r--r--. 1 boincer umatlas         0 Nov 27 05:47 boinc_lockfile
[2025-11-27 18:05:24] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 05:47 pandaJob.out
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas        57 Nov 27 05:47 setup.sh.local
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas    991564 Nov 27 05:47 agis_schedconf.cvmfs.json
[2025-11-27 18:05:24] drwx------. 5 boincer umatlas      4096 Nov 27 05:47 pilot3
[2025-11-27 18:05:24] -rw-r--r--. 1 boincer umatlas       533 Nov 27 17:54 boinc_task_state.xml
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas 916670677 Nov 27 18:03 HITS.47556173._001399.pool.root.1
[2025-11-27 18:05:24] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 18:03 init_data.xml
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas      1071 Nov 27 18:04 memory_monitor_summary.json
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas        95 Nov 27 18:04 pilot_heartbeat.json
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas   1516240 Nov 27 18:04 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas   1947318 Nov 27 18:04 log.47556173._001399.job.log.tgz.1
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas      8630 Nov 27 18:04 heartbeat.json
[2025-11-27 18:05:24] -rw-r--r--. 1 boincer umatlas        29 Nov 27 18:05 wrapper_checkpoint.txt
[2025-11-27 18:05:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 18:05 boinc_mmap_file
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas       823 Nov 27 18:05 pilotlog.txt
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas   5827755 Nov 27 18:05 log.47556173._001399.job.log.1
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas       353 Nov 27 18:05 output.list
[2025-11-27 18:05:24] -rw-r--r--. 1 boincer umatlas       620 Nov 27 18:05 runtime_log
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas   7792640 Nov 27 18:05 result.tar.gz
[2025-11-27 18:05:24] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 18:05 runtime_log.err
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas       664 Nov 27 18:05 PG1KDmzZVi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmV0MKDmNKtIwn.diag
[2025-11-27 18:05:24] -rw-r--r--. 1 boincer umatlas     21412 Nov 27 18:05 stderr.txt
[2025-11-27 18:05:24] HITS file was successfully produced:
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas 916670677 Nov 27 18:03 shared/HITS.pool.root.1
[2025-11-27 18:05:24]  *** Contents of shared directory: ***
[2025-11-27 18:05:24] total 1302204
[2025-11-27 18:05:24] -rw-r--r--. 2 boincer umatlas 408368431 Nov 27 05:47 ATLAS.root_0
[2025-11-27 18:05:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:47 start_atlas.sh
[2025-11-27 18:05:24] -rw-r--r--. 2 boincer umatlas    590098 Nov 27 05:47 input.tar.gz
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas 916670677 Nov 27 18:03 HITS.pool.root.1
[2025-11-27 18:05:24] -rw-------. 1 boincer umatlas   7792640 Nov 27 18:05 result.tar.gz
18:05:26 (2435048): run_atlas exited; CPU time 189638.272055
18:05:26 (2435048): called boinc_finish(0)

</stderr_txt>
]]>

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