Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:27:03 (592231): wrapper (7.7.26015): starting
02:27:03 (592231): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 02:27:03] Arguments: --nthreads 12
[2025-11-27 02:27:03] Threads: 12
[2025-11-27 02:27:03] Checking for CVMFS
[2025-11-27 02:27:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 02:27:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 02:27:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 02:27:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 02:27:05] 2.11.5.0 1708977 29384 203636 153360 2 365 28768410 45568000 20818 130560 0 293477590 99.797 169840226 24899 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-27 02:27:05] CVMFS is ok
[2025-11-27 02:27:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 02:27:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 02:27:05] Further information can be found at the LHC@home message board.
[2025-11-27 02:27:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 02:27:05] Checking for apptainer binary...
[2025-11-27 02:27:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 02:27:05] Running /usr/bin/apptainer --version
[2025-11-27 02:27:05] apptainer version 1.4.1-1.el9
[2025-11-27 02:27:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 02:27:06] wns0085.triumf.lcg
[2025-11-27 02:27:06] apptainer works
[2025-11-27 02:27:06] Set ATHENA_PROC_NUMBER=12
[2025-11-27 02:27:06] Set ATHENA_CORE_NUMBER=12
[2025-11-27 02:27:06] Starting ATLAS job with PandaID=6898721182
[2025-11-27 02:27:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:34:50]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:34:51] 2025-11-27 10:33:42,089 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 02:34:51] 2025-11-27 10:33:42,089 | WARNING  | wrong length of table data, x=[1764239349.0, 1764239410.0, 1764239471.0], y=[1665.0, 612638.0, 699353.0] (must be same and length>=4)
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | could have reported an average CPU frequency of 2644 MHz (4 samples)
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | ..............................
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . Timing measurements:
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . get job = 0 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . initial setup = 3 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . payload setup = 16 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . stage-in = 0 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,132 | INFO     | . payload execution = 154 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,132 | INFO     | . stage-out = 1 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,132 | INFO     | . log creation = 0 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,133 | INFO     | ..............................
[2025-11-27 02:34:51] 2025-11-27 10:33:42,133 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 02:34:51] 2025-11-27 10:33:42,133 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898721182/pilotlog.txt
[2025-11-27 02:34:51] 2025-11-27 10:33:42,199 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-27 02:34:51] - Log from pilotlog.txt -
[2025-11-27 02:34:51] 2025-11-27 10:33:42,087 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6898721182/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:34:51] 2025-11-27 10:33:42,088 | INFO     | extracted standard info from prmon json
[2025-11-27 02:34:51] 2025-11-27 10:33:42,088 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:34:51] 2025-11-27 10:33:42,088 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:34:51] 2025-11-27 10:33:42,088 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 02:34:51] 2025-11-27 10:33:42,089 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 02:34:51] 2025-11-27 10:33:42,089 | WARNING  | wrong length of table data, x=[1764239349.0, 1764239410.0, 1764239471.0], y=[1665.0, 612638.0, 699353.0] (must be same and length>=4)
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | could have reported an average CPU frequency of 2644 MHz (4 samples)
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | ..............................
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . Timing measurements:
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . get job = 0 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . initial setup = 3 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . payload setup = 16 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . stage-in = 0 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,132 | INFO     | . payload execution = 154 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,132 | INFO     | . stage-out = 1 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,132 | INFO     | . log creation = 0 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,133 | INFO     | ..............................
[2025-11-27 02:34:51] 2025-11-27 10:33:42,133 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 02:34:51] 2025-11-27 10:33:42,133 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898721182/pilotlog.txt
[2025-11-27 02:34:51] 2025-11-27 10:33:42,200 | WARNING  | 
[2025-11-27 02:34:51] [begin log extracts]
[2025-11-27 02:34:51] - Log from pilotlog.txt -
[2025-11-27 02:34:51] 2025-11-27 10:33:42,087 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6898721182/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:34:51] 2025-11-27 10:33:42,088 | INFO     | extracted standard info from prmon json
[2025-11-27 02:34:51] 2025-11-27 10:33:42,088 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:34:51] 2025-11-27 10:33:42,088 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:34:51] 2025-11-27 10:33:42,088 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 02:34:51] 2025-11-27 10:33:42,089 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 02:34:51] 2025-11-27 10:33:42,089 | WARNING  | wrong length of table data, x=[1764239349.0, 1764239410.0, 1764239471.0], y=[1665.0, 612638.0, 699353.0] (must be same and length>=4)
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | could have reported an average CPU frequency of 2644 MHz (4 samples)
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | ..............................
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . Timing measurements:
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . get job = 0 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . initial setup = 3 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . payload setup = 16 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,090 | INFO     | . stage-in = 0 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,132 | INFO     | . payload execution = 154 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,132 | INFO     | . stage-out = 1 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,132 | INFO     | . log creation = 0 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,133 | INFO     | ..............................
[2025-11-27 02:34:51] 2025-11-27 10:33:42,133 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 02:34:51] 2025-11-27 10:33:42,133 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898721182/pilotlog.txt
[2025-11-27 02:34:51] [end log extracts]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,200 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-27 02:34:51] 2025-11-27 10:33:42,201 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-27 02:34:51] 2025-11-27 10:33:42,549 | INFO     | 
[2025-11-27 02:34:51] 2025-11-27 10:33:42,549 | INFO     | job summary report
[2025-11-27 02:34:51] 2025-11-27 10:33:42,549 | INFO     | --------------------------------------------------
[2025-11-27 02:34:51] 2025-11-27 10:33:42,549 | INFO     | PanDA job id: 6898721182
[2025-11-27 02:34:51] 2025-11-27 10:33:42,549 | INFO     | task id: 47556161
[2025-11-27 02:34:51] 2025-11-27 10:33:42,549 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-27 02:31:17,931 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | pilot state: failed 
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | transexitcode: 65
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | exeerrorcode: 65
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | exitcode: 65
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | cpuconsumptiontime: 47 s
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | nevents: 0
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | neventsw: 0
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | pid: 610962
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | pgrp: 610962
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | corecount: 12
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | event service: False
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | sizes: {0: 2284141, 1: 2284169, 2: 2284169, 3: 2284340, 14: 2284368, 23: 2284658, 25: 2284814, 174: 2310346, 175: 2310322, 176: 2314668, 177: 2314724, 311: 2315170
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | --------------------------------------------------
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | 
[2025-11-27 02:34:51] 2025-11-27 10:33:42,550 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-27 02:34:51] 2025-11-27 10:33:42,610 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,610 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,610 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,610 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,610 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,611 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:34:51] 2025-11-27 10:33:42,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,611 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:34:51] 2025-11-27 10:33:42,611 | INFO     | job 6898721182 has completed (purged errors)
[2025-11-27 02:34:51] 2025-11-27 10:33:42,611 | INFO     | overall cleanup function is called
[2025-11-27 02:34:51] 2025-11-27 10:33:43,629 | INFO     | --- collectZombieJob: --- 10, [610962]
[2025-11-27 02:34:51] 2025-11-27 10:33:43,629 | INFO     | zombie collector waiting for pid 610962
[2025-11-27 02:34:51] 2025-11-27 10:33:43,630 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:34:51] 2025-11-27 10:33:43,630 | INFO     | collected zombie processes
[2025-11-27 02:34:51] 2025-11-27 10:33:43,630 | INFO     | will attempt to kill all subprocesses of pid=610962
[2025-11-27 02:34:51] 2025-11-27 10:33:43,824 | INFO     | process IDs to be killed: [610962] (in reverse order)
[2025-11-27 02:34:51] 2025-11-27 10:33:44,182 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:34:51] 2025-11-27 10:33:44,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:34:51] 2025-11-27 10:33:44,214 | INFO     | did not find any defunct processes belonging to 610962
[2025-11-27 02:34:51] 2025-11-27 10:33:44,247 | INFO     | did not find any defunct processes belonging to 610962
[2025-11-27 02:34:51] 2025-11-27 10:33:44,248 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:34:51] 2025-11-27 10:33:44,248 | INFO     | ready for new job
[2025-11-27 02:34:51] 2025-11-27 10:33:44,248 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:34:51] 2025-11-27 10:33:44,257 | INFO     | ***************************************
[2025-11-27 02:34:51] 2025-11-27 10:33:44,258 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:34:51] 2025-11-27 10:33:44,258 | INFO     | ***************************************
[2025-11-27 02:34:51] 2025-11-27 10:33:44,258 | INFO     | 
[2025-11-27 02:34:51] 2025-11-27 10:33:44,260 | INFO     | architecture information:
[2025-11-27 02:34:51] 2025-11-27 10:33:44,266 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:34:51] 2025-11-27 10:33:44,304 | INFO     | cat /etc/os-release:
[2025-11-27 02:34:51] NAME="CentOS Linux"
[2025-11-27 02:34:51] VERSION="7 (Core)"
[2025-11-27 02:34:51] ID="centos"
[2025-11-27 02:34:51] ID_LIKE="rhel fedora"
[2025-11-27 02:34:51] VERSION_ID="7"
[2025-11-27 02:34:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:34:51] ANSI_COLOR="0;31"
[2025-11-27 02:34:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:34:51] HOME_URL="https://www.centos.org/"
[2025-11-27 02:34:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:34:51] 
[2025-11-27 02:34:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:34:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:34:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:34:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:34:51] 
[2025-11-27 02:34:51] 2025-11-27 10:33:44,305 | INFO     | ***************************************
[2025-11-27 02:34:51] 2025-11-27 10:33:44,808 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-27 02:34:51] 2025-11-27 10:33:44,891 | INFO     | sufficient remaining disk space (1768789377024 B)
[2025-11-27 02:34:51] 2025-11-27 10:33:44,891 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:34:51] 2025-11-27 10:33:44,891 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:34:51] 2025-11-27 10:33:44,891 | INFO     | update_server=False
[2025-11-27 02:34:51] 2025-11-27 10:33:44,891 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:34:51] 2025-11-27 10:33:44,892 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:34:51] 2025-11-27 10:33:45,031 | INFO     | all data control threads have been joined
[2025-11-27 02:34:51] 2025-11-27 10:33:45,034 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:34:51] 2025-11-27 10:33:45,034 | INFO     | aborting loop
[2025-11-27 02:34:51] 2025-11-27 10:33:45,482 | INFO     | all job control threads have been joined
[2025-11-27 02:34:51] 2025-11-27 10:33:45,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:34:51] 2025-11-27 10:33:45,780 | INFO     | all payload control threads have been joined
[2025-11-27 02:34:51] 2025-11-27 10:33:45,897 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:46,035 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:46,037 | INFO     | [data] control thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:46,040 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:46,090 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:46,395 | INFO     | [job] validate thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:46,495 | INFO     | [job] control thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:46,497 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:46,539 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:46,577 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:46,775 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:46,786 | INFO     | [payload] control thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:47,015 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:47,566 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:34:51] 2025-11-27 10:33:47,600 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:48,572 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:33:48,904 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:34:51] 2025-11-27 10:34:15,583 | INFO     | PID=597104 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 02:34:51] 2025-11-27 10:34:15,583 | INFO     | .. there are 35 such processes running
[2025-11-27 02:34:51] 2025-11-27 10:34:15,584 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:34:51] 2025-11-27 10:34:15,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:34:51] 2025-11-27 10:34:15,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:34:51] 2025-11-27 10:34:44,309 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:34:51] 2025-11-27 10:34:44,890 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139644423014208)>', '<ExcThread(monitor, started 139644094088960)>']
[2025-11-27 02:34:51] 2025-11-27 10:34:45,769 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:34:51] 2025-11-27 10:34:45,769 | INFO     | [monitor] control thread has ended
[2025-11-27 02:34:51] 2025-11-27 10:34:49,916 | INFO     | all workflow threads have been joined
[2025-11-27 02:34:51] 2025-11-27 10:34:49,916 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:34:51] 2025-11-27 10:34:49,917 | INFO     | traces error code: 0
[2025-11-27 02:34:51] 2025-11-27 10:34:49,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:34:51] 2025-11-27 10:34:50,200 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:34:51] 2025-11-27 10:34:50,202 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:34:51] 2025-11-27 10:34:50,204 [wrapper] pilotpid: 597104
[2025-11-27 02:34:51] 2025-11-27 10:34:50,206 [wrapper] Pilot exit status: 0
[2025-11-27 02:34:51] 2025-11-27 10:34:50,260 [wrapper] pandaids: 6898721182
[2025-11-27 02:34:51] 2025-11-27 10:34:50,497 [wrapper] cleanup supervisor_pilot  597110 597105
[2025-11-27 02:34:51] 2025-11-27 10:34:50,499 [wrapper] Test setup, not cleaning
[2025-11-27 02:34:51] 2025-11-27 10:34:50,501 [wrapper] apfmon messages muted
[2025-11-27 02:34:51] 2025-11-27 10:34:50,503 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:34:51] 2025-11-27 10:34:50,505 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:34:51]  *** Error codes and diagnostics ***
[2025-11-27 02:34:51]     "exeErrorCode": 65,
[2025-11-27 02:34:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-27 02:34:51]     "pilotErrorCode": 1305,
[2025-11-27 02:34:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-27 02:34:51]  *** Listing of results directory ***
[2025-11-27 02:34:51] total 405068
[2025-11-27 02:34:51] -rw-r--r--. 1 boinc boinc    576529 Nov 26 14:16 pilot3.tar.gz
[2025-11-27 02:34:51] -rwx------. 1 boinc boinc     36292 Nov 26 14:32 runpilot2-wrapper.sh
[2025-11-27 02:34:51] -rw-r--r--. 1 boinc boinc      5112 Nov 26 14:32 queuedata.json
[2025-11-27 02:34:51] -rw-r--r--. 1 boinc boinc       100 Nov 27 02:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:34:51] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 02:27 run_atlas
[2025-11-27 02:34:51] -rw-r--r--. 1 boinc boinc       105 Nov 27 02:27 job.xml
[2025-11-27 02:34:51] -rw-r--r--. 1 boinc boinc      6596 Nov 27 02:27 init_data.xml
[2025-11-27 02:34:51] -rw-r--r--. 2 boinc boinc 410552814 Nov 27 02:27 EVNT.47483658._002702.pool.root.1
[2025-11-27 02:34:51] -rw-r--r--. 2 boinc boinc     15847 Nov 27 02:27 start_atlas.sh
[2025-11-27 02:34:51] drwxrwx--x. 2 boinc boinc      4096 Nov 27 02:27 shared
[2025-11-27 02:34:51] -rw-r--r--. 2 boinc boinc    590103 Nov 27 02:27 input.tar.gz
[2025-11-27 02:34:51] -rw-r--r--. 1 boinc boinc         0 Nov 27 02:27 boinc_lockfile
[2025-11-27 02:34:51] -rw-r--r--. 1 boinc boinc      2786 Nov 27 02:27 pandaJob.out
[2025-11-27 02:34:51] -rw-------. 1 boinc boinc    991564 Nov 27 02:27 agis_schedconf.cvmfs.json
[2025-11-27 02:34:51] -rw-------. 1 boinc boinc   1516240 Nov 27 02:27 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:34:51] drwx------. 5 boinc boinc      4096 Nov 27 02:27 pilot3
[2025-11-27 02:34:51] -rw-r--r--. 1 boinc boinc       524 Nov 27 02:31 boinc_task_state.xml
[2025-11-27 02:34:51] -rw-------. 1 boinc boinc      1039 Nov 27 02:31 memory_monitor_summary.json
[2025-11-27 02:34:51] -rw-------. 1 boinc boinc     50229 Nov 27 02:31 log.47556161._006843.job.log.tgz.1
[2025-11-27 02:34:51] -rw-------. 1 boinc boinc     10363 Nov 27 02:33 heartbeat.json
[2025-11-27 02:34:51] -rw-------. 1 boinc boinc        95 Nov 27 02:34 pilot_heartbeat.json
[2025-11-27 02:34:51] -rw-r--r--. 1 boinc boinc      8192 Nov 27 02:34 boinc_mmap_file
[2025-11-27 02:34:51] -rw-r--r--. 1 boinc boinc        23 Nov 27 02:34 wrapper_checkpoint.txt
[2025-11-27 02:34:51] -rw-------. 1 boinc boinc      4822 Nov 27 02:34 pilotlog.txt
[2025-11-27 02:34:51] -rw-------. 1 boinc boinc    110247 Nov 27 02:34 log.47556161._006843.job.log.1
[2025-11-27 02:34:51] -rw-------. 1 boinc boinc       186 Nov 27 02:34 output.list
[2025-11-27 02:34:51] -rw-r--r--. 1 boinc boinc       620 Nov 27 02:34 runtime_log
[2025-11-27 02:34:51] -rw-------. 1 boinc boinc    184320 Nov 27 02:34 result.tar.gz
[2025-11-27 02:34:51] -rw-r--r--. 1 boinc boinc      8636 Nov 27 02:34 runtime_log.err
[2025-11-27 02:34:51] -rw-------. 1 boinc boinc       649 Nov 27 02:34 nFWNDmeEdi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEGKKDmDbx6An.diag
[2025-11-27 02:34:51] -rw-r--r--. 1 boinc boinc     22598 Nov 27 02:34 stderr.txt
[2025-11-27 02:34:51] No HITS result produced
[2025-11-27 02:34:51]  *** Contents of shared directory: ***
[2025-11-27 02:34:51] total 401712
[2025-11-27 02:34:51] -rw-r--r--. 2 boinc boinc 410552814 Nov 27 02:27 ATLAS.root_0
[2025-11-27 02:34:51] -rw-r--r--. 2 boinc boinc     15847 Nov 27 02:27 start_atlas.sh
[2025-11-27 02:34:51] -rw-r--r--. 2 boinc boinc    590103 Nov 27 02:27 input.tar.gz
[2025-11-27 02:34:51] -rw-------. 1 boinc boinc    184320 Nov 27 02:34 result.tar.gz
02:34:52 (592231): run_atlas exited; CPU time 52.434620
02:34:52 (592231): called boinc_finish(0)

</stderr_txt>
]]>

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