Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:00:37 (3396050): wrapper (7.7.26015): starting
11:00:37 (3396050): wrapper: running run_atlas (--nthreads 10)
[2025-11-27 11:00:37] Arguments: --nthreads 10
[2025-11-27 11:00:37] Threads: 10
[2025-11-27 11:00:37] Checking for CVMFS
[2025-11-27 11:00:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 11:00:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 11:00:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 11:00:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 11:00:59] 2.13.3.0 11338 31568 326392 153372 3 225 30493355 32935937 41590 16776704 0 168271410 99.544 195098670 38335 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 11:00:59] CVMFS is ok
[2025-11-27 11:00:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 11:00:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 11:00:59] Further information can be found at the LHC@home message board.
[2025-11-27 11:00:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 11:00:59] Checking for apptainer binary...
[2025-11-27 11:00:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 11:00:59] Running /usr/bin/apptainer --version
[2025-11-27 11:00:59] apptainer version 1.4.4-1.el9
[2025-11-27 11:00:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 11:00:59] c7-3-17.aglt2.org
[2025-11-27 11:00:59] apptainer works
[2025-11-27 11:00:59] Set ATHENA_PROC_NUMBER=10
[2025-11-27 11:00:59] Set ATHENA_CORE_NUMBER=10
[2025-11-27 11:00:59] Starting ATLAS job with PandaID=6897372742
[2025-11-27 11:00:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 04:32:24]  *** The last 200 lines of the pilot log: ***
[2025-11-28 04:32:24] 2025-11-28 09:31:27,519 [wrapper] supervise_pilot (15 min periods counter: 71)
[2025-11-28 04:32:24] 2025-11-28 09:31:29,334 | INFO     | time since job start (63007s) is within the limit (172800.0s)
[2025-11-28 04:32:24] 2025-11-28 09:31:29,720 | INFO     | monitor loop #3422: job 0:6897372742 is in state 'finished'
[2025-11-28 04:32:24] 2025-11-28 09:31:29,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:32:24] 2025-11-28 09:31:31,341 | INFO     | time since job start (63009s) is within the limit (172800.0s)
[2025-11-28 04:32:24] 2025-11-28 09:31:32,227 | INFO     | monitor loop #3423: job 0:6897372742 is in state 'finished'
[2025-11-28 04:32:24] 2025-11-28 09:31:32,228 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:32:24] 2025-11-28 09:31:33,355 | INFO     | time since job start (63011s) is within the limit (172800.0s)
[2025-11-28 04:32:24] 2025-11-28 09:31:34,732 | INFO     | monitor loop #3424: job 0:6897372742 is in state 'finished'
[2025-11-28 04:32:24] 2025-11-28 09:31:34,733 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:32:24] 2025-11-28 09:31:35,362 | INFO     | time since job start (63013s) is within the limit (172800.0s)
[2025-11-28 04:32:24] 2025-11-28 09:31:37,278 | INFO     | monitor loop #3425: job 0:6897372742 is in state 'finished'
[2025-11-28 04:32:24] 2025-11-28 09:31:37,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:32:24] 2025-11-28 09:31:39,802 | INFO     | monitor loop #3426: job 0:6897372742 is in state 'finished'
[2025-11-28 04:32:24] 2025-11-28 09:31:39,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:32:24] 2025-11-28 09:31:40,556 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 04:32:24] 2025-11-28 09:31:40,561 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3087.531656249999
[2025-11-28 04:32:24] 2025-11-28 09:31:40,576 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6897372742/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 04:32:24] 2025-11-28 09:31:40,577 | INFO     | extracted standard info from prmon json
[2025-11-28 04:32:24] 2025-11-28 09:31:40,577 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 04:32:24] 2025-11-28 09:31:40,577 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 04:32:24] 2025-11-28 09:31:40,590 | INFO     | fitting pss+swap vs Time
[2025-11-28 04:32:24] 2025-11-28 09:31:40,616 | INFO     | sum of square deviations: 340805908573.9845
[2025-11-28 04:32:24] 2025-11-28 09:31:40,683 | INFO     | sum of deviations: -92115745294.93005
[2025-11-28 04:32:24] 2025-11-28 09:31:40,683 | INFO     | mean x: 1764290775.496124
[2025-11-28 04:32:24] 2025-11-28 09:31:40,684 | INFO     | mean y: 3179973.3924418604
[2025-11-28 04:32:24] 2025-11-28 09:31:40,684 | INFO     | intersect: 480046587.5360017
[2025-11-28 04:32:24] 2025-11-28 09:31:40,689 | INFO     | chi2: 24.22904170118282
[2025-11-28 04:32:24] 2025-11-28 09:31:40,690 | INFO     | sum of square deviations: 335876807213.9634
[2025-11-28 04:32:24] 2025-11-28 09:31:40,898 | INFO     | sum of deviations: 330764597133.1292
[2025-11-28 04:32:24] 2025-11-28 09:31:40,898 | INFO     | mean x: 1764290623.0058422
[2025-11-28 04:32:24] 2025-11-28 09:31:40,898 | INFO     | mean y: 3193052.311587147
[2025-11-28 04:32:24] 2025-11-28 09:31:40,898 | INFO     | intersect: -1734244200.3074572
[2025-11-28 04:32:24] 2025-11-28 09:31:40,899 | INFO     | chi2: 20.062439003637824
[2025-11-28 04:32:24] 2025-11-28 09:31:40,899 | INFO     | current chi2=20.062439003637824 (change=17.196729234823962 %)
[2025-11-28 04:32:24] 2025-11-28 09:31:40,899 | INFO     | right removable region: 1026
[2025-11-28 04:32:24] 2025-11-28 09:31:40,901 | INFO     | sum of square deviations: 335875613324.9759
[2025-11-28 04:32:24] 2025-11-28 09:31:41,111 | INFO     | sum of deviations: -426321205745.89026
[2025-11-28 04:32:24] 2025-11-28 09:31:41,111 | INFO     | mean x: 1764290928.0048685
[2025-11-28 04:32:24] 2025-11-28 09:31:41,111 | INFO     | mean y: 3190300.377799416
[2025-11-28 04:32:24] 2025-11-28 09:31:41,111 | INFO     | intersect: 2242574780.446691
[2025-11-28 04:32:24] 2025-11-28 09:31:41,112 | INFO     | chi2: 21.817113057377334
[2025-11-28 04:32:24] 2025-11-28 09:31:41,112 | INFO     | current chi2=21.817113057377334 (change=9.954700947531652 %)
[2025-11-28 04:32:24] 2025-11-28 09:31:41,112 | INFO     | left removable region: 10
[2025-11-28 04:32:24] 2025-11-28 09:31:41,113 | INFO     | sum of square deviations: 325198462191.5239
[2025-11-28 04:32:24] 2025-11-28 09:31:41,384 | INFO     | sum of deviations: -17915377385.220047
[2025-11-28 04:32:24] 2025-11-28 09:31:41,385 | INFO     | mean x: 1764290897.5216537
[2025-11-28 04:32:24] 2025-11-28 09:31:41,385 | INFO     | mean y: 3208468.4645669293
[2025-11-28 04:32:24] 2025-11-28 09:31:41,385 | INFO     | intersect: 100404307.0715579
[2025-11-28 04:32:24] 2025-11-28 09:31:41,386 | INFO     | chi2: 16.916767392069797
[2025-11-28 04:32:24] 2025-11-28 09:31:41,386 | INFO     | current memory leak: -0.06 B/s (using 1016 data points, chi2=16.92)
[2025-11-28 04:32:24] 2025-11-28 09:31:41,387 | INFO     | could have reported an average CPU frequency of 3126 MHz (38 samples)
[2025-11-28 04:32:24] 2025-11-28 09:31:41,387 | INFO     | ..............................
[2025-11-28 04:32:24] 2025-11-28 09:31:41,387 | INFO     | . Timing measurements:
[2025-11-28 04:32:24] 2025-11-28 09:31:41,387 | INFO     | . get job = 0 s
[2025-11-28 04:32:24] 2025-11-28 09:31:41,387 | INFO     | . initial setup = 3 s
[2025-11-28 04:32:24] 2025-11-28 09:31:41,387 | INFO     | . payload setup = 13 s
[2025-11-28 04:32:24] 2025-11-28 09:31:41,387 | INFO     | . stage-in = 0 s
[2025-11-28 04:32:24] 2025-11-28 09:31:41,388 | INFO     | . payload execution = 62943 s
[2025-11-28 04:32:24] 2025-11-28 09:31:41,388 | INFO     | . stage-out = 9 s
[2025-11-28 04:32:24] 2025-11-28 09:31:41,388 | INFO     | . log creation = 3 s
[2025-11-28 04:32:24] 2025-11-28 09:31:41,388 | INFO     | ..............................
[2025-11-28 04:32:24] 2025-11-28 09:31:42,633 | INFO     | 
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | job summary report
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | --------------------------------------------------
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | PanDA job id: 6897372742
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | task id: 47556161
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | errors: (none)
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | pilot state: finished 
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | transexitcode: 0
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | exeerrorcode: 0
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | exeerrordiag: 
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | exitcode: 0
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | exitmsg: OK
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | cpuconsumptiontime: 203388 s
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | nevents: 1000
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | neventsw: 0
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | pid: 3418108
[2025-11-28 04:32:24] 2025-11-28 09:31:42,634 | INFO     | pgrp: 3418108
[2025-11-28 04:32:24] 2025-11-28 09:31:42,635 | INFO     | corecount: 10
[2025-11-28 04:32:24] 2025-11-28 09:31:42,635 | INFO     | event service: False
[2025-11-28 04:32:24] 2025-11-28 09:31:42,635 | INFO     | sizes: {0: 2284265, 9: 2284527, 11: 2284555, 62962: 2337544, 62973: 2346594, 63001: 2346784}
[2025-11-28 04:32:24] 2025-11-28 09:31:42,635 | INFO     | --------------------------------------------------
[2025-11-28 04:32:24] 2025-11-28 09:31:42,635 | INFO     | 
[2025-11-28 04:32:24] 2025-11-28 09:31:42,635 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-28 04:32:24] 2025-11-28 09:31:42,688 | INFO     | PID=3404162 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 04:32:24] 2025-11-28 09:31:42,708 | INFO     | .. there are 68 such processes running
[2025-11-28 04:32:24] 2025-11-28 09:31:42,799 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,799 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,799 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,799 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,799 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,799 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,799 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,799 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,799 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,799 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,799 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,800 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,800 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,800 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,800 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,800 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,800 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,800 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 04:32:24] 2025-11-28 09:31:42,800 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,800 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 04:32:24] 2025-11-28 09:31:42,800 | INFO     | job 6897372742 has completed (purged errors)
[2025-11-28 04:32:24] 2025-11-28 09:31:42,800 | INFO     | overall cleanup function is called
[2025-11-28 04:32:24] 2025-11-28 09:31:44,054 | INFO     | --- collectZombieJob: --- 10, [3418108]
[2025-11-28 04:32:24] 2025-11-28 09:31:44,055 | INFO     | zombie collector waiting for pid 3418108
[2025-11-28 04:32:24] 2025-11-28 09:31:44,055 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 04:32:24] 2025-11-28 09:31:44,055 | INFO     | collected zombie processes
[2025-11-28 04:32:24] 2025-11-28 09:31:44,055 | INFO     | will attempt to kill all subprocesses of pid=3418108
[2025-11-28 04:32:24] 2025-11-28 09:31:47,233 | INFO     | process IDs to be killed: [3418108] (in reverse order)
[2025-11-28 04:32:24] 2025-11-28 09:31:47,571 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 04:32:24] 2025-11-28 09:31:47,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 04:32:24] 2025-11-28 09:31:47,660 | INFO     | did not find any defunct processes belonging to 3418108
[2025-11-28 04:32:24] 2025-11-28 09:31:47,800 | INFO     | did not find any defunct processes belonging to 3418108
[2025-11-28 04:32:24] 2025-11-28 09:31:47,820 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 04:32:24] 2025-11-28 09:31:47,820 | INFO     | ready for new job
[2025-11-28 04:32:24] 2025-11-28 09:31:47,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 04:32:24] 2025-11-28 09:31:47,833 | INFO     | ***************************************
[2025-11-28 04:32:24] 2025-11-28 09:31:47,847 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 04:32:24] 2025-11-28 09:31:47,848 | INFO     | ***************************************
[2025-11-28 04:32:24] 2025-11-28 09:31:47,848 | INFO     | 
[2025-11-28 04:32:24] 2025-11-28 09:31:47,860 | INFO     | architecture information:
[2025-11-28 04:32:24] 2025-11-28 09:31:47,874 | INFO     | executing command: cat /etc/os-release
[2025-11-28 04:32:24] 2025-11-28 09:31:47,937 | INFO     | cat /etc/os-release:
[2025-11-28 04:32:24] NAME="CentOS Linux"
[2025-11-28 04:32:24] VERSION="7 (Core)"
[2025-11-28 04:32:24] ID="centos"
[2025-11-28 04:32:24] ID_LIKE="rhel fedora"
[2025-11-28 04:32:24] VERSION_ID="7"
[2025-11-28 04:32:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 04:32:24] ANSI_COLOR="0;31"
[2025-11-28 04:32:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 04:32:24] HOME_URL="https://www.centos.org/"
[2025-11-28 04:32:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 04:32:24] 
[2025-11-28 04:32:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 04:32:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 04:32:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 04:32:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 04:32:24] 
[2025-11-28 04:32:24] 2025-11-28 09:31:47,937 | INFO     | ***************************************
[2025-11-28 04:32:24] 2025-11-28 09:31:48,441 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-28 04:32:24] 2025-11-28 09:31:48,531 | INFO     | sufficient remaining disk space (64555581440 B)
[2025-11-28 04:32:24] 2025-11-28 09:31:48,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 04:32:24] 2025-11-28 09:31:48,531 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 04:32:24] 2025-11-28 09:31:48,531 | INFO     | update_server=False
[2025-11-28 04:32:24] 2025-11-28 09:31:48,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 04:32:24] 2025-11-28 09:31:48,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 04:32:24] 2025-11-28 09:31:48,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 04:32:24] 2025-11-28 09:31:48,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:32:24] 2025-11-28 09:31:48,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:32:24] 2025-11-28 09:31:48,803 | INFO     | aborting loop
[2025-11-28 04:32:24] 2025-11-28 09:31:49,068 | INFO     | all job control threads have been joined
[2025-11-28 04:32:24] 2025-11-28 09:31:49,127 | INFO     | all payload control threads have been joined
[2025-11-28 04:32:24] 2025-11-28 09:31:49,326 | INFO     | all data control threads have been joined
[2025-11-28 04:32:24] 2025-11-28 09:31:49,537 | INFO     | [job] retrieve thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:49,569 | INFO     | [job] queue monitor thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:49,668 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:49,809 | INFO     | [job] job monitor thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:49,931 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:50,004 | INFO     | [job] validate thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:50,076 | INFO     | [job] control thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:50,132 | INFO     | [payload] control thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:50,332 | INFO     | [data] control thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:50,381 | INFO     | [payload] failed_post thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:50,543 | INFO     | [data] copytool_out thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:50,591 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:50,592 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:50,791 | INFO     | [payload] validate_post thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:50,850 | INFO     | [data] copytool_in thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:31:52,545 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 04:32:24] 2025-11-28 09:32:16,295 | INFO     | [monitor] cgroup control has ended
[2025-11-28 04:32:24] 2025-11-28 09:32:18,122 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870328567616)>', '<ExcThread(monitor, started 139869091260160)>']
[2025-11-28 04:32:24] 2025-11-28 09:32:18,616 | INFO     | PID=3404162 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 04:32:24] 2025-11-28 09:32:18,616 | INFO     | .. there are 68 such processes running
[2025-11-28 04:32:24] 2025-11-28 09:32:18,616 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 04:32:24] 2025-11-28 09:32:18,616 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 04:32:24] 2025-11-28 09:32:18,616 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 04:32:24] 2025-11-28 09:32:18,617 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 04:32:24] 2025-11-28 09:32:18,617 | INFO     | [monitor] control thread has ended
[2025-11-28 04:32:24] 2025-11-28 09:32:23,147 | INFO     | all workflow threads have been joined
[2025-11-28 04:32:24] 2025-11-28 09:32:23,148 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 04:32:24] 2025-11-28 09:32:23,148 | INFO     | traces error code: 0
[2025-11-28 04:32:24] 2025-11-28 09:32:23,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 04:32:24] 2025-11-28 09:32:23,294 [wrapper] ==== pilot stdout END ====
[2025-11-28 04:32:24] 2025-11-28 09:32:23,299 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 04:32:24] 2025-11-28 09:32:23,303 [wrapper] pilotpid: 3404162
[2025-11-28 04:32:24] 2025-11-28 09:32:23,306 [wrapper] Pilot exit status: 0
[2025-11-28 04:32:24] 2025-11-28 09:32:23,357 [wrapper] pandaids: 6897372742
[2025-11-28 04:32:24] 2025-11-28 09:32:23,601 [wrapper] cleanup supervisor_pilot 1095695 3404163
[2025-11-28 04:32:24] 2025-11-28 09:32:23,605 [wrapper] Test setup, not cleaning
[2025-11-28 04:32:24] 2025-11-28 09:32:23,615 [wrapper] apfmon messages muted
[2025-11-28 04:32:24] 2025-11-28 09:32:23,620 [wrapper] ==== wrapper stdout END ====
[2025-11-28 04:32:24] 2025-11-28 09:32:23,633 [wrapper] ==== wrapper stderr END ====
[2025-11-28 04:32:24]  *** Error codes and diagnostics ***
[2025-11-28 04:32:24]     "exeErrorCode": 0,
[2025-11-28 04:32:24]     "exeErrorDiag": "",
[2025-11-28 04:32:24]     "pilotErrorCode": 0,
[2025-11-28 04:32:24]     "pilotErrorDiag": "",
[2025-11-28 04:32:24]  *** Listing of results directory ***
[2025-11-28 04:32:24] total 1330360
[2025-11-28 04:32:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-28 04:32:24] -rwx------. 1 boincer umatlas     36292 Nov 25 11:55 runpilot2-wrapper.sh
[2025-11-28 04:32:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-28 04:32:24] -rw-r--r--. 1 boincer umatlas       100 Nov 27 11:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 04:32:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 11:00 run_atlas
[2025-11-28 04:32:24] -rw-r--r--. 1 boincer umatlas       105 Nov 27 11:00 job.xml
[2025-11-28 04:32:24] -rw-r--r--. 2 boincer umatlas 409838677 Nov 27 11:00 EVNT.47483658._002206.pool.root.1
[2025-11-28 04:32:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 11:00 start_atlas.sh
[2025-11-28 04:32:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 11:00 shared
[2025-11-28 04:32:24] -rw-r--r--. 2 boincer umatlas    590108 Nov 27 11:00 input.tar.gz
[2025-11-28 04:32:24] -rw-r--r--. 1 boincer umatlas         0 Nov 27 11:00 boinc_lockfile
[2025-11-28 04:32:24] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 11:00 pandaJob.out
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas        57 Nov 27 11:01 setup.sh.local
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas    991572 Nov 27 11:01 agis_schedconf.cvmfs.json
[2025-11-28 04:32:24] drwx------. 5 boincer umatlas      4096 Nov 27 11:01 pilot3
[2025-11-28 04:32:24] -rw-r--r--. 1 boincer umatlas       532 Nov 28 03:35 boinc_task_state.xml
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas 928858832 Nov 28 04:27 HITS.47556161._001893.pool.root.1
[2025-11-28 04:32:24] -rw-r--r--. 1 boincer umatlas      6948 Nov 28 04:30 init_data.xml
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas      1050 Nov 28 04:30 memory_monitor_summary.json
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas   1516240 Nov 28 04:31 agis_ddmendpoints.agis.ALL.json
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas   2345351 Nov 28 04:31 log.47556161._001893.job.log.tgz.1
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas        95 Nov 28 04:31 pilot_heartbeat.json
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas      8582 Nov 28 04:31 heartbeat.json
[2025-11-28 04:32:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 04:32 boinc_mmap_file
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas      4824 Nov 28 04:32 pilotlog.txt
[2025-11-28 04:32:24] -rw-r--r--. 1 boincer umatlas        29 Nov 28 04:32 wrapper_checkpoint.txt
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas   7488400 Nov 28 04:32 log.47556161._001893.job.log.1
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas       353 Nov 28 04:32 output.list
[2025-11-28 04:32:24] -rw-r--r--. 1 boincer umatlas       620 Nov 28 04:32 runtime_log
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas   9850880 Nov 28 04:32 result.tar.gz
[2025-11-28 04:32:24] -rw-r--r--. 1 boincer umatlas      9340 Nov 28 04:32 runtime_log.err
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas       659 Nov 28 04:32 oc2NDm8UBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUQMKDmT9pCgn.diag
[2025-11-28 04:32:24] -rw-r--r--. 1 boincer umatlas     21813 Nov 28 04:32 stderr.txt
[2025-11-28 04:32:24] HITS file was successfully produced:
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas 928858832 Nov 28 04:27 shared/HITS.pool.root.1
[2025-11-28 04:32:24]  *** Contents of shared directory: ***
[2025-11-28 04:32:24] total 1317552
[2025-11-28 04:32:24] -rw-r--r--. 2 boincer umatlas 409838677 Nov 27 11:00 ATLAS.root_0
[2025-11-28 04:32:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 11:00 start_atlas.sh
[2025-11-28 04:32:24] -rw-r--r--. 2 boincer umatlas    590108 Nov 27 11:00 input.tar.gz
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas 928858832 Nov 28 04:27 HITS.pool.root.1
[2025-11-28 04:32:24] -rw-------. 1 boincer umatlas   9850880 Nov 28 04:32 result.tar.gz
04:32:25 (3396050): run_atlas exited; CPU time 204638.285728
04:32:25 (3396050): called boinc_finish(0)

</stderr_txt>
]]>

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