Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:55:30 (2081439): wrapper (7.7.26015): starting
04:55:30 (2081439): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 04:55:30] Arguments: --nthreads 8
[2025-11-27 04:55:30] Threads: 8
[2025-11-27 04:55:30] Checking for CVMFS
[2025-11-27 04:55:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 04:55:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 04:55:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 04:55:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 04:55:33] 2.13.3.0 22787 31286 257776 153358 3 784 37308411 40960000 69459 16776704 0 454681858 99.749 277625223 47715 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 04:55:33] CVMFS is ok
[2025-11-27 04:55:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 04:55:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 04:55:33] Further information can be found at the LHC@home message board.
[2025-11-27 04:55:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 04:55:33] Checking for apptainer binary...
[2025-11-27 04:55:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 04:55:33] Running /usr/bin/apptainer --version
[2025-11-27 04:55:33] apptainer version 1.4.4-1.el9
[2025-11-27 04:55:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 04:55:33] c8-6-11.aglt2.org
[2025-11-27 04:55:33] apptainer works
[2025-11-27 04:55:33] Set ATHENA_PROC_NUMBER=8
[2025-11-27 04:55:33] Set ATHENA_CORE_NUMBER=8
[2025-11-27 04:55:33] Starting ATLAS job with PandaID=6896990075
[2025-11-27 04:55:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:49:27]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:49:27] 2025-11-27 20:48:40,704 | INFO     | time since job start (39107s) is within the limit (172800.0s)
[2025-11-27 15:49:27] 2025-11-27 20:48:41,935 | INFO     | monitor loop #2164: job 0:6896990075 is in state 'finished'
[2025-11-27 15:49:27] 2025-11-27 20:48:41,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:49:27] 2025-11-27 20:48:42,718 | INFO     | time since job start (39109s) is within the limit (172800.0s)
[2025-11-27 15:49:27] 2025-11-27 20:48:44,440 | INFO     | monitor loop #2165: job 0:6896990075 is in state 'finished'
[2025-11-27 15:49:27] 2025-11-27 20:48:44,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:49:27] 2025-11-27 20:48:44,725 | INFO     | time since job start (39111s) is within the limit (172800.0s)
[2025-11-27 15:49:27] 2025-11-27 20:48:46,732 | INFO     | time since job start (39113s) is within the limit (172800.0s)
[2025-11-27 15:49:27] 2025-11-27 20:48:46,945 | INFO     | monitor loop #2166: job 0:6896990075 is in state 'finished'
[2025-11-27 15:49:27] 2025-11-27 20:48:46,945 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:49:27] 2025-11-27 20:48:48,739 | INFO     | time since job start (39115s) is within the limit (172800.0s)
[2025-11-27 15:49:27] 2025-11-27 20:48:49,451 | INFO     | monitor loop #2167: job 0:6896990075 is in state 'finished'
[2025-11-27 15:49:27] 2025-11-27 20:48:49,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:49:27] 2025-11-27 20:48:50,746 | INFO     | time since job start (39117s) is within the limit (172800.0s)
[2025-11-27 15:49:27] 2025-11-27 20:48:51,957 | INFO     | monitor loop #2168: job 0:6896990075 is in state 'finished'
[2025-11-27 15:49:27] 2025-11-27 20:48:51,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:49:27] 2025-11-27 20:48:52,769 | INFO     | time since job start (39119s) is within the limit (172800.0s)
[2025-11-27 15:49:27] 2025-11-27 20:48:53,022 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 15:49:27] 2025-11-27 20:48:53,051 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3794.5741718750005
[2025-11-27 15:49:27] 2025-11-27 20:48:53,082 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896990075/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:49:27] 2025-11-27 20:48:53,083 | INFO     | extracted standard info from prmon json
[2025-11-27 15:49:27] 2025-11-27 20:48:53,083 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:49:27] 2025-11-27 20:48:53,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:49:27] 2025-11-27 20:48:53,115 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:49:27] 2025-11-27 20:48:53,139 | INFO     | sum of square deviations: 80901058693.59943
[2025-11-27 15:49:27] 2025-11-27 20:48:53,158 | INFO     | sum of deviations: 666177445148.2653
[2025-11-27 15:49:27] 2025-11-27 20:48:53,158 | INFO     | mean x: 1764257032.0250392
[2025-11-27 15:49:27] 2025-11-27 20:48:53,158 | INFO     | mean y: 2841091.420970266
[2025-11-27 15:49:27] 2025-11-27 20:48:53,158 | INFO     | intersect: -14524882787.083572
[2025-11-27 15:49:27] 2025-11-27 20:48:53,159 | INFO     | chi2: 18.74408385039488
[2025-11-27 15:49:27] 2025-11-27 20:48:53,159 | INFO     | sum of square deviations: 79016878945.80357
[2025-11-27 15:49:27] 2025-11-27 20:48:53,184 | INFO     | sum of deviations: 888552508882.4927
[2025-11-27 15:49:27] 2025-11-27 20:48:53,184 | INFO     | mean x: 1764256879.533123
[2025-11-27 15:49:27] 2025-11-27 20:48:53,184 | INFO     | mean y: 2859086.690851735
[2025-11-27 15:49:27] 2025-11-27 20:48:53,184 | INFO     | intersect: -19836381560.836746
[2025-11-27 15:49:27] 2025-11-27 20:48:53,211 | INFO     | chi2: 15.221594519278218
[2025-11-27 15:49:27] 2025-11-27 20:48:53,211 | INFO     | current chi2=15.221594519278218 (change=18.792539337911965 %)
[2025-11-27 15:49:27] 2025-11-27 20:48:53,211 | INFO     | right removable region: 633
[2025-11-27 15:49:27] 2025-11-27 20:48:53,212 | INFO     | sum of square deviations: 79016479395.80354
[2025-11-27 15:49:27] 2025-11-27 20:48:53,237 | INFO     | sum of deviations: 405989592783.0251
[2025-11-27 15:49:27] 2025-11-27 20:48:53,237 | INFO     | mean x: 1764257184.533123
[2025-11-27 15:49:27] 2025-11-27 20:48:53,237 | INFO     | mean y: 2862142.189274448
[2025-11-27 15:49:27] 2025-11-27 20:48:53,237 | INFO     | intersect: -9061956505.64293
[2025-11-27 15:49:27] 2025-11-27 20:48:53,237 | INFO     | chi2: 14.18249171061067
[2025-11-27 15:49:27] 2025-11-27 20:48:53,237 | INFO     | current chi2=14.18249171061067 (change=24.33617015476652 %)
[2025-11-27 15:49:27] 2025-11-27 20:48:53,237 | INFO     | left removable region: 10
[2025-11-27 15:49:27] 2025-11-27 20:48:53,238 | INFO     | sum of square deviations: 74974357968.35635
[2025-11-27 15:49:27] 2025-11-27 20:48:53,288 | INFO     | sum of deviations: 441889710519.407
[2025-11-27 15:49:27] 2025-11-27 20:48:53,288 | INFO     | mean x: 1764257154.0513644
[2025-11-27 15:49:27] 2025-11-27 20:48:53,288 | INFO     | mean y: 2903766.0497592296
[2025-11-27 15:49:27] 2025-11-27 20:48:53,288 | INFO     | intersect: -10395412461.140755
[2025-11-27 15:49:27] 2025-11-27 20:48:53,288 | INFO     | chi2: 6.298666323073039
[2025-11-27 15:49:27] 2025-11-27 20:48:53,288 | INFO     | current memory leak: 5.89 B/s (using 623 data points, chi2=6.30)
[2025-11-27 15:49:27] 2025-11-27 20:48:53,289 | INFO     | could have reported an average CPU frequency of 3797 MHz (25 samples)
[2025-11-27 15:49:27] 2025-11-27 20:48:53,289 | INFO     | ..............................
[2025-11-27 15:49:27] 2025-11-27 20:48:53,289 | INFO     | . Timing measurements:
[2025-11-27 15:49:27] 2025-11-27 20:48:53,289 | INFO     | . get job = 0 s
[2025-11-27 15:49:27] 2025-11-27 20:48:53,289 | INFO     | . initial setup = 7 s
[2025-11-27 15:49:27] 2025-11-27 20:48:53,289 | INFO     | . payload setup = 55 s
[2025-11-27 15:49:27] 2025-11-27 20:48:53,289 | INFO     | . stage-in = 0 s
[2025-11-27 15:49:27] 2025-11-27 20:48:53,289 | INFO     | . payload execution = 38963 s
[2025-11-27 15:49:27] 2025-11-27 20:48:53,289 | INFO     | . stage-out = 7 s
[2025-11-27 15:49:27] 2025-11-27 20:48:53,290 | INFO     | . log creation = 1 s
[2025-11-27 15:49:27] 2025-11-27 20:48:53,290 | INFO     | ..............................
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | 
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | job summary report
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | --------------------------------------------------
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | PanDA job id: 6896990075
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | task id: 47556161
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | errors: (none)
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | pilot state: finished 
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | transexitcode: 0
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | exeerrorcode: 0
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | exeerrordiag: 
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | exitcode: 0
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | exitmsg: OK
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | cpuconsumptiontime: 138590 s
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | nevents: 1000
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | neventsw: 0
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | pid: 2112952
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | pgrp: 2112952
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | corecount: 8
[2025-11-27 15:49:27] 2025-11-27 20:48:53,557 | INFO     | event service: False
[2025-11-27 15:49:27] 2025-11-27 20:48:53,558 | INFO     | sizes: {0: 2284093, 1: 2284292, 12: 2284292, 23: 2284320, 32: 2284610, 34: 2284638, 39023: 2327240, 39030: 2336234, 39032: 2336290, 39054: 2336600}
[2025-11-27 15:49:27] 2025-11-27 20:48:53,558 | INFO     | --------------------------------------------------
[2025-11-27 15:49:27] 2025-11-27 20:48:53,558 | INFO     | 
[2025-11-27 15:49:27] 2025-11-27 20:48:53,558 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 15:49:27] 2025-11-27 20:48:53,611 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,611 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,611 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,611 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | job 6896990075 has completed (purged errors)
[2025-11-27 15:49:27] 2025-11-27 20:48:53,612 | INFO     | overall cleanup function is called
[2025-11-27 15:49:27] 2025-11-27 20:48:54,635 | INFO     | --- collectZombieJob: --- 10, [2112952]
[2025-11-27 15:49:27] 2025-11-27 20:48:54,635 | INFO     | zombie collector waiting for pid 2112952
[2025-11-27 15:49:27] 2025-11-27 20:48:54,635 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:49:27] 2025-11-27 20:48:54,635 | INFO     | collected zombie processes
[2025-11-27 15:49:27] 2025-11-27 20:48:54,635 | INFO     | will attempt to kill all subprocesses of pid=2112952
[2025-11-27 15:49:27] 2025-11-27 20:48:55,921 | INFO     | process IDs to be killed: [2112952] (in reverse order)
[2025-11-27 15:49:27] 2025-11-27 20:48:56,394 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:49:27] 2025-11-27 20:48:56,394 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:49:27] 2025-11-27 20:48:56,463 | INFO     | did not find any defunct processes belonging to 2112952
[2025-11-27 15:49:27] 2025-11-27 20:48:56,535 | INFO     | did not find any defunct processes belonging to 2112952
[2025-11-27 15:49:27] 2025-11-27 20:48:56,539 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:49:27] 2025-11-27 20:48:56,539 | INFO     | ready for new job
[2025-11-27 15:49:27] 2025-11-27 20:48:56,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:49:27] 2025-11-27 20:48:56,542 | INFO     | ***************************************
[2025-11-27 15:49:27] 2025-11-27 20:48:56,542 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:49:27] 2025-11-27 20:48:56,542 | INFO     | ***************************************
[2025-11-27 15:49:27] 2025-11-27 20:48:56,542 | INFO     | 
[2025-11-27 15:49:27] 2025-11-27 20:48:56,555 | INFO     | architecture information:
[2025-11-27 15:49:27] 2025-11-27 20:48:56,555 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:49:27] 2025-11-27 20:48:56,602 | INFO     | cat /etc/os-release:
[2025-11-27 15:49:27] NAME="CentOS Linux"
[2025-11-27 15:49:27] VERSION="7 (Core)"
[2025-11-27 15:49:27] ID="centos"
[2025-11-27 15:49:27] ID_LIKE="rhel fedora"
[2025-11-27 15:49:27] VERSION_ID="7"
[2025-11-27 15:49:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:49:27] ANSI_COLOR="0;31"
[2025-11-27 15:49:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:49:27] HOME_URL="https://www.centos.org/"
[2025-11-27 15:49:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:49:27] 
[2025-11-27 15:49:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:49:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:49:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:49:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:49:27] 
[2025-11-27 15:49:27] 2025-11-27 20:48:56,602 | INFO     | ***************************************
[2025-11-27 15:49:27] 2025-11-27 20:48:57,108 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 15:49:27] 2025-11-27 20:48:57,152 | INFO     | sufficient remaining disk space (163135356928 B)
[2025-11-27 15:49:27] 2025-11-27 20:48:57,152 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:49:27] 2025-11-27 20:48:57,152 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:49:27] 2025-11-27 20:48:57,152 | INFO     | update_server=False
[2025-11-27 15:49:27] 2025-11-27 20:48:57,152 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:49:27] 2025-11-27 20:48:57,537 | INFO     | all payload control threads have been joined
[2025-11-27 15:49:27] 2025-11-27 20:48:58,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:49:27] 2025-11-27 20:48:58,050 | INFO     | aborting loop
[2025-11-27 15:49:27] 2025-11-27 20:48:58,158 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:48:58,219 | INFO     | all data control threads have been joined
[2025-11-27 15:49:27] 2025-11-27 20:48:58,262 | INFO     | all job control threads have been joined
[2025-11-27 15:49:27] 2025-11-27 20:48:58,292 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:48:58,472 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:49:27] 2025-11-27 20:48:58,536 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:48:58,543 | INFO     | [payload] control thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:48:58,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:49:27] 2025-11-27 20:48:58,877 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:48:59,056 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:48:59,103 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:48:59,225 | INFO     | [data] control thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:48:59,268 | INFO     | [job] control thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:48:59,364 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:48:59,391 | INFO     | [job] validate thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:48:59,589 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:48:59,599 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:48:59,736 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:49:00,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:49:27] 2025-11-27 20:49:00,492 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:49:03,002 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:49:27] 2025-11-27 20:49:04,275 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:49:27] 2025-11-27 20:49:04,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746907252544)>', '<ExcThread(monitor, started 139746424649472)>']
[2025-11-27 15:49:27] 2025-11-27 20:49:09,535 | INFO     | all workflow threads have been joined
[2025-11-27 15:49:27] 2025-11-27 20:49:09,537 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:49:27] 2025-11-27 20:49:09,537 | INFO     | traces error code: 0
[2025-11-27 15:49:27] 2025-11-27 20:49:09,537 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:49:27] 2025-11-27 20:49:27,115 | INFO     | PID=2095312 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:49:27] 2025-11-27 20:49:27,115 | INFO     | .. there are 83 such processes running
[2025-11-27 15:49:27] 2025-11-27 20:49:27,116 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:49:27] 2025-11-27 20:49:27,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:49:27] 2025-11-27 20:49:27,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:49:27] 2025-11-27 20:49:27,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:49:27] 2025-11-27 20:49:27,116 | INFO     | [monitor] control thread has ended
[2025-11-27 15:49:27] 2025-11-27 20:49:27,392 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:49:27] 2025-11-27 20:49:27,422 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:49:27] 2025-11-27 20:49:27,426 [wrapper] pilotpid: 2095312
[2025-11-27 15:49:27] 2025-11-27 20:49:27,431 [wrapper] Pilot exit status: 0
[2025-11-27 15:49:27] 2025-11-27 20:49:27,448 [wrapper] pandaids: 6896990075
[2025-11-27 15:49:27] 2025-11-27 20:49:27,609 [wrapper] cleanup supervisor_pilot 2813120 2095313
[2025-11-27 15:49:27] 2025-11-27 20:49:27,611 [wrapper] Test setup, not cleaning
[2025-11-27 15:49:27] 2025-11-27 20:49:27,625 [wrapper] apfmon messages muted
[2025-11-27 15:49:27] 2025-11-27 20:49:27,628 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:49:27] 2025-11-27 20:49:27,632 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:49:27]  *** Error codes and diagnostics ***
[2025-11-27 15:49:27]     "exeErrorCode": 0,
[2025-11-27 15:49:27]     "exeErrorDiag": "",
[2025-11-27 15:49:27]     "pilotErrorCode": 0,
[2025-11-27 15:49:27]     "pilotErrorDiag": "",
[2025-11-27 15:49:27]  *** Listing of results directory ***
[2025-11-27 15:49:27] total 1317260
[2025-11-27 15:49:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 07:49 pilot3.tar.gz
[2025-11-27 15:49:27] -rwx------. 1 boincer umatlas     36292 Nov 25 08:07 runpilot2-wrapper.sh
[2025-11-27 15:49:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 08:07 queuedata.json
[2025-11-27 15:49:27] -rw-r--r--. 1 boincer umatlas       100 Nov 27 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:49:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 04:55 run_atlas
[2025-11-27 15:49:27] -rw-r--r--. 1 boincer umatlas       105 Nov 27 04:55 job.xml
[2025-11-27 15:49:27] -rw-r--r--. 2 boincer umatlas 408820512 Nov 27 04:55 EVNT.47483658._002168.pool.root.1
[2025-11-27 15:49:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 04:55 start_atlas.sh
[2025-11-27 15:49:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 04:55 shared
[2025-11-27 15:49:27] -rw-r--r--. 2 boincer umatlas    590101 Nov 27 04:55 input.tar.gz
[2025-11-27 15:49:27] -rw-r--r--. 1 boincer umatlas         0 Nov 27 04:55 boinc_lockfile
[2025-11-27 15:49:27] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 04:55 pandaJob.out
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas        57 Nov 27 04:55 setup.sh.local
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas    991551 Nov 27 04:56 agis_schedconf.cvmfs.json
[2025-11-27 15:49:27] drwx------. 5 boincer umatlas      4096 Nov 27 04:56 pilot3
[2025-11-27 15:49:27] -rw-r--r--. 1 boincer umatlas       533 Nov 27 15:29 boinc_task_state.xml
[2025-11-27 15:49:27] -rw-r--r--. 1 boincer umatlas      7175 Nov 27 15:45 init_data.xml
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas 923004761 Nov 27 15:47 HITS.47556161._001515.pool.root.1
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas      1058 Nov 27 15:48 memory_monitor_summary.json
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas   1516240 Nov 27 15:48 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas   1836604 Nov 27 15:48 log.47556161._001515.job.log.tgz.1
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas      8590 Nov 27 15:48 heartbeat.json
[2025-11-27 15:49:27] -rw-r--r--. 1 boincer umatlas        29 Nov 27 15:49 wrapper_checkpoint.txt
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas        95 Nov 27 15:49 pilot_heartbeat.json
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas       823 Nov 27 15:49 pilotlog.txt
[2025-11-27 15:49:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 15:49 boinc_mmap_file
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas   4726977 Nov 27 15:49 log.47556161._001515.job.log.1
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas       353 Nov 27 15:49 output.list
[2025-11-27 15:49:27] -rw-r--r--. 1 boincer umatlas       620 Nov 27 15:49 runtime_log
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas   6584320 Nov 27 15:49 result.tar.gz
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas       659 Nov 27 15:49 tncMDmsw7h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVOMKDmwn0ixm.diag
[2025-11-27 15:49:27] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 15:49 runtime_log.err
[2025-11-27 15:49:27] -rw-r--r--. 1 boincer umatlas     21794 Nov 27 15:49 stderr.txt
[2025-11-27 15:49:27] HITS file was successfully produced:
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas 923004761 Nov 27 15:47 shared/HITS.pool.root.1
[2025-11-27 15:49:27]  *** Contents of shared directory: ***
[2025-11-27 15:49:27] total 1307648
[2025-11-27 15:49:27] -rw-r--r--. 2 boincer umatlas 408820512 Nov 27 04:55 ATLAS.root_0
[2025-11-27 15:49:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 04:55 start_atlas.sh
[2025-11-27 15:49:27] -rw-r--r--. 2 boincer umatlas    590101 Nov 27 04:55 input.tar.gz
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas 923004761 Nov 27 15:47 HITS.pool.root.1
[2025-11-27 15:49:27] -rw-------. 1 boincer umatlas   6584320 Nov 27 15:49 result.tar.gz
15:49:29 (2081439): run_atlas exited; CPU time 139530.179893
15:49:29 (2081439): called boinc_finish(0)

</stderr_txt>
]]>

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