Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:37:49 (1510029): wrapper (7.7.26015): starting
06:37:49 (1510029): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 06:37:49] Arguments: --nthreads 4
[2025-11-27 06:37:49] Threads: 4
[2025-11-27 06:37:49] Checking for CVMFS
[2025-11-27 06:37:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 06:37:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 06:37:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 06:37:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 06:37:49] 2.13.2.0 439692 5602 60788 153366 2 72 3066422 4096001 5106 130560 0 15601046 99.910 1282474 923 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 06:37:49] CVMFS is ok
[2025-11-27 06:37:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 06:37:49] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 06:37:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 06:37:49] Further information can be found at the LHC@home message board.
[2025-11-27 06:37:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 06:37:49] Checking for apptainer binary...
[2025-11-27 06:37:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 06:37:49] Running /usr/bin/apptainer --version
[2025-11-27 06:37:49] apptainer version 1.4.3
[2025-11-27 06:37:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 06:37:49] b650riptide
[2025-11-27 06:37:49] apptainer works
[2025-11-27 06:37:49] Set ATHENA_PROC_NUMBER=4
[2025-11-27 06:37:49] Set ATHENA_CORE_NUMBER=4
[2025-11-27 06:37:49] Starting ATLAS job with PandaID=6896922401
[2025-11-27 06:37:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:49:55]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:49:55] 2025-11-27 20:48:45,603 | INFO     | monitor loop #1955: job 0:6896922401 is in state 'finished'
[2025-11-27 13:49:55] 2025-11-27 20:48:45,603 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:49:55] 2025-11-27 20:48:47,254 | INFO     | time since job start (25840s) is within the limit (172800.0s)
[2025-11-27 13:49:55] 2025-11-27 20:48:47,771 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 13:49:55] 2025-11-27 20:48:47,773 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4627.53421875
[2025-11-27 13:49:55] 2025-11-27 20:48:47,776 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6896922401/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 13:49:55] 2025-11-27 20:48:47,777 | INFO     | extracted standard info from prmon json
[2025-11-27 13:49:55] 2025-11-27 20:48:47,777 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 13:49:55] 2025-11-27 20:48:47,777 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 13:49:55] 2025-11-27 20:48:47,780 | INFO     | fitting pss+swap vs Time
[2025-11-27 13:49:55] 2025-11-27 20:48:47,780 | INFO     | sum of square deviations: 23635978050.0
[2025-11-27 13:49:55] 2025-11-27 20:48:47,782 | INFO     | sum of deviations: 115163385106.00003
[2025-11-27 13:49:55] 2025-11-27 20:48:47,782 | INFO     | mean x: 1764263608.5
[2025-11-27 13:49:55] 2025-11-27 20:48:47,782 | INFO     | mean y: 2247743.2358490564
[2025-11-27 13:49:55] 2025-11-27 20:48:47,782 | INFO     | intersect: -8593908884.781782
[2025-11-27 13:49:55] 2025-11-27 20:48:47,783 | INFO     | chi2: 4.065263506402102
[2025-11-27 13:49:55] 2025-11-27 20:48:47,783 | INFO     | sum of square deviations: 22809618370.0
[2025-11-27 13:49:55] 2025-11-27 20:48:47,785 | INFO     | sum of deviations: 183050615847.99997
[2025-11-27 13:49:55] 2025-11-27 20:48:47,785 | INFO     | mean x: 1764263456.0
[2025-11-27 13:49:55] 2025-11-27 20:48:47,785 | INFO     | mean y: 2260209.656324582
[2025-11-27 13:49:55] 2025-11-27 20:48:47,785 | INFO     | intersect: -14156219204.61021
[2025-11-27 13:49:55] 2025-11-27 20:48:47,785 | INFO     | chi2: 2.1938827586790306
[2025-11-27 13:49:55] 2025-11-27 20:48:47,785 | INFO     | current chi2=2.1938827586790306 (change=46.03344272212524 %)
[2025-11-27 13:49:55] 2025-11-27 20:48:47,785 | INFO     | sum of square deviations: 22002747427.5
[2025-11-27 13:49:55] 2025-11-27 20:48:47,787 | INFO     | sum of deviations: 178972016737.49994
[2025-11-27 13:49:55] 2025-11-27 20:48:47,787 | INFO     | mean x: 1764263303.5
[2025-11-27 13:49:55] 2025-11-27 20:48:47,787 | INFO     | mean y: 2259438.7270531403
[2025-11-27 13:49:55] 2025-11-27 20:48:47,788 | INFO     | intersect: -14348392111.66597
[2025-11-27 13:49:55] 2025-11-27 20:48:47,788 | INFO     | chi2: 2.1941450179315374
[2025-11-27 13:49:55] 2025-11-27 20:48:47,788 | INFO     | current chi2=2.1941450179315374 (change=-0.011954114296640462 %)
[2025-11-27 13:49:55] 2025-11-27 20:48:47,788 | INFO     | right removable region: 413
[2025-11-27 13:49:55] 2025-11-27 20:48:47,788 | INFO     | sum of square deviations: 22809618370.0
[2025-11-27 13:49:55] 2025-11-27 20:48:47,790 | INFO     | sum of deviations: 26028499431.999996
[2025-11-27 13:49:55] 2025-11-27 20:48:47,790 | INFO     | mean x: 1764263761.0
[2025-11-27 13:49:55] 2025-11-27 20:48:47,790 | INFO     | mean y: 2264155.46300716
[2025-11-27 13:49:55] 2025-11-27 20:48:47,790 | INFO     | intersect: -2010971557.4800797
[2025-11-27 13:49:55] 2025-11-27 20:48:47,790 | INFO     | chi2: 1.9590598594813882
[2025-11-27 13:49:55] 2025-11-27 20:48:47,790 | INFO     | current chi2=1.9590598594813882 (change=51.80976936928688 %)
[2025-11-27 13:49:55] 2025-11-27 20:48:47,791 | INFO     | sum of square deviations: 22002747427.5
[2025-11-27 13:49:55] 2025-11-27 20:48:47,792 | INFO     | sum of deviations: 23820740156.99999
[2025-11-27 13:49:55] 2025-11-27 20:48:47,793 | INFO     | mean x: 1764263913.5
[2025-11-27 13:49:55] 2025-11-27 20:48:47,793 | INFO     | mean y: 2264568.9903381644
[2025-11-27 13:49:55] 2025-11-27 20:48:47,793 | INFO     | intersect: -1907772911.1167767
[2025-11-27 13:49:55] 2025-11-27 20:48:47,793 | INFO     | chi2: 1.9571009581448626
[2025-11-27 13:49:55] 2025-11-27 20:48:47,793 | INFO     | current chi2=1.9571009581448626 (change=0.09999190821275428 %)
[2025-11-27 13:49:55] 2025-11-27 20:48:47,793 | INFO     | left removable region: 20
[2025-11-27 13:49:55] 2025-11-27 20:48:47,793 | INFO     | sum of square deviations: 18821458012.0
[2025-11-27 13:49:55] 2025-11-27 20:48:47,795 | INFO     | sum of deviations: 90390441415.00002
[2025-11-27 13:49:55] 2025-11-27 20:48:47,795 | INFO     | mean x: 1764263883.0
[2025-11-27 13:49:55] 2025-11-27 20:48:47,795 | INFO     | mean y: 2276304.328244275
[2025-11-27 13:49:55] 2025-11-27 20:48:47,795 | INFO     | intersect: -8470637486.6882105
[2025-11-27 13:49:55] 2025-11-27 20:48:47,795 | INFO     | chi2: 0.04298746075315888
[2025-11-27 13:49:55] 2025-11-27 20:48:47,795 | INFO     | current memory leak: 4.80 B/s (using 393 data points, chi2=0.04)
[2025-11-27 13:49:55] 2025-11-27 20:48:47,795 | INFO     | could have reported an average CPU frequency of 4588 MHz (18 samples)
[2025-11-27 13:49:55] 2025-11-27 20:48:47,795 | INFO     | ..............................
[2025-11-27 13:49:55] 2025-11-27 20:48:47,795 | INFO     | . Timing measurements:
[2025-11-27 13:49:55] 2025-11-27 20:48:47,796 | INFO     | . get job = 0 s
[2025-11-27 13:49:55] 2025-11-27 20:48:47,796 | INFO     | . initial setup = 12 s
[2025-11-27 13:49:55] 2025-11-27 20:48:47,796 | INFO     | . payload setup = 3 s
[2025-11-27 13:49:55] 2025-11-27 20:48:47,796 | INFO     | . stage-in = 5 s
[2025-11-27 13:49:55] 2025-11-27 20:48:47,796 | INFO     | . payload execution = 25808 s
[2025-11-27 13:49:55] 2025-11-27 20:48:47,796 | INFO     | . stage-out = 6 s
[2025-11-27 13:49:55] 2025-11-27 20:48:47,796 | INFO     | . log creation = 0 s
[2025-11-27 13:49:55] 2025-11-27 20:48:47,796 | INFO     | ..............................
[2025-11-27 13:49:55] 2025-11-27 20:48:48,220 | INFO     | 
[2025-11-27 13:49:55] 2025-11-27 20:48:48,220 | INFO     | job summary report
[2025-11-27 13:49:55] 2025-11-27 20:48:48,220 | INFO     | --------------------------------------------------
[2025-11-27 13:49:55] 2025-11-27 20:48:48,220 | INFO     | PanDA job id: 6896922401
[2025-11-27 13:49:55] 2025-11-27 20:48:48,220 | INFO     | task id: 47556161
[2025-11-27 13:49:55] 2025-11-27 20:48:48,220 | INFO     | errors: (none)
[2025-11-27 13:49:55] 2025-11-27 20:48:48,220 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 13:49:55] 2025-11-27 20:48:48,220 | INFO     | pilot state: finished 
[2025-11-27 13:49:55] 2025-11-27 20:48:48,220 | INFO     | transexitcode: 0
[2025-11-27 13:49:55] 2025-11-27 20:48:48,220 | INFO     | exeerrorcode: 0
[2025-11-27 13:49:55] 2025-11-27 20:48:48,220 | INFO     | exeerrordiag: 
[2025-11-27 13:49:55] 2025-11-27 20:48:48,220 | INFO     | exitcode: 0
[2025-11-27 13:49:55] 2025-11-27 20:48:48,221 | INFO     | exitmsg: OK
[2025-11-27 13:49:55] 2025-11-27 20:48:48,221 | INFO     | cpuconsumptiontime: 101959 s
[2025-11-27 13:49:55] 2025-11-27 20:48:48,221 | INFO     | nevents: 1000
[2025-11-27 13:49:55] 2025-11-27 20:48:48,221 | INFO     | neventsw: 0
[2025-11-27 13:49:55] 2025-11-27 20:48:48,221 | INFO     | pid: 1522658
[2025-11-27 13:49:55] 2025-11-27 20:48:48,221 | INFO     | pgrp: 1522658
[2025-11-27 13:49:55] 2025-11-27 20:48:48,221 | INFO     | corecount: 4
[2025-11-27 13:49:55] 2025-11-27 20:48:48,221 | INFO     | event service: False
[2025-11-27 13:49:55] 2025-11-27 20:48:48,221 | INFO     | sizes: {0: 2284100, 1: 2284299, 8: 2284561, 11: 2284589, 25815: 2321945, 25816: 2321944, 25822: 2331136, 25824: 2331192, 25828: 2331438}
[2025-11-27 13:49:55] 2025-11-27 20:48:48,221 | INFO     | --------------------------------------------------
[2025-11-27 13:49:55] 2025-11-27 20:48:48,221 | INFO     | 
[2025-11-27 13:49:55] 2025-11-27 20:48:48,221 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-11-27 13:49:55] 2025-11-27 20:48:48,232 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | job 6896922401 has completed (purged errors)
[2025-11-27 13:49:55] 2025-11-27 20:48:48,233 | INFO     | overall cleanup function is called
[2025-11-27 13:49:55] 2025-11-27 20:48:49,243 | INFO     | --- collectZombieJob: --- 10, [1522658]
[2025-11-27 13:49:55] 2025-11-27 20:48:49,243 | INFO     | zombie collector waiting for pid 1522658
[2025-11-27 13:49:55] 2025-11-27 20:48:49,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 13:49:55] 2025-11-27 20:48:49,243 | INFO     | collected zombie processes
[2025-11-27 13:49:55] 2025-11-27 20:48:49,243 | INFO     | will attempt to kill all subprocesses of pid=1522658
[2025-11-27 13:49:55] 2025-11-27 20:48:49,332 | INFO     | process IDs to be killed: [1522658] (in reverse order)
[2025-11-27 13:49:55] 2025-11-27 20:48:49,370 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 13:49:55] 2025-11-27 20:48:49,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 13:49:55] 2025-11-27 20:48:49,374 | INFO     | did not find any defunct processes belonging to 1522658
[2025-11-27 13:49:55] 2025-11-27 20:48:49,377 | INFO     | did not find any defunct processes belonging to 1522658
[2025-11-27 13:49:55] 2025-11-27 20:48:49,377 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 13:49:55] 2025-11-27 20:48:49,377 | INFO     | ready for new job
[2025-11-27 13:49:55] 2025-11-27 20:48:49,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 13:49:55] 2025-11-27 20:48:49,379 | INFO     | ***************************************
[2025-11-27 13:49:55] 2025-11-27 20:48:49,379 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 13:49:55] 2025-11-27 20:48:49,379 | INFO     | ***************************************
[2025-11-27 13:49:55] 2025-11-27 20:48:49,379 | INFO     | 
[2025-11-27 13:49:55] 2025-11-27 20:48:49,380 | INFO     | architecture information:
[2025-11-27 13:49:55] 2025-11-27 20:48:49,380 | INFO     | executing command: cat /etc/os-release
[2025-11-27 13:49:55] 2025-11-27 20:48:49,391 | INFO     | cat /etc/os-release:
[2025-11-27 13:49:55] NAME="CentOS Linux"
[2025-11-27 13:49:55] VERSION="7 (Core)"
[2025-11-27 13:49:55] ID="centos"
[2025-11-27 13:49:55] ID_LIKE="rhel fedora"
[2025-11-27 13:49:55] VERSION_ID="7"
[2025-11-27 13:49:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 13:49:55] ANSI_COLOR="0;31"
[2025-11-27 13:49:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 13:49:55] HOME_URL="https://www.centos.org/"
[2025-11-27 13:49:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 13:49:55] 
[2025-11-27 13:49:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 13:49:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 13:49:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 13:49:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 13:49:55] 
[2025-11-27 13:49:55] 2025-11-27 20:48:49,391 | INFO     | ***************************************
[2025-11-27 13:49:55] 2025-11-27 20:48:49,893 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-11-27 13:49:55] 2025-11-27 20:48:49,903 | INFO     | sufficient remaining disk space (238451425280 B)
[2025-11-27 13:49:55] 2025-11-27 20:48:49,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:49:55] 2025-11-27 20:48:49,903 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:49:55] 2025-11-27 20:48:49,903 | INFO     | update_server=False
[2025-11-27 13:49:55] 2025-11-27 20:48:49,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:49:55] 2025-11-27 20:48:49,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:49:55] 2025-11-27 20:48:49,904 | INFO     | aborting loop
[2025-11-27 13:49:55] 2025-11-27 20:48:49,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:49:55] 2025-11-27 20:48:50,091 | INFO     | all data control threads have been joined
[2025-11-27 13:49:55] 2025-11-27 20:48:50,192 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:49:55] 2025-11-27 20:48:50,586 | INFO     | all job control threads have been joined
[2025-11-27 13:49:55] 2025-11-27 20:48:50,904 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:50,909 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:50,997 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:51,096 | INFO     | [data] control thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:51,219 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:51,226 | INFO     | all payload control threads have been joined
[2025-11-27 13:49:55] 2025-11-27 20:48:51,237 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:51,248 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:51,591 | INFO     | [job] control thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:51,941 | INFO     | [job] validate thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:52,197 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:52,231 | INFO     | [payload] control thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:52,235 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:52,274 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:52,364 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:52,847 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:49:55] 2025-11-27 20:48:53,853 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:48:53,960 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:49:55] 2025-11-27 20:49:20,412 | INFO     | PID=1513884 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 13:49:55] 2025-11-27 20:49:20,412 | INFO     | .. there are 7 such processes running
[2025-11-27 13:49:55] 2025-11-27 20:49:20,412 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:49:55] 2025-11-27 20:49:20,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:49:55] 2025-11-27 20:49:20,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:49:55] 2025-11-27 20:49:48,822 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:49:55] 2025-11-27 20:49:50,773 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129596804667200)>', '<ExcThread(monitor, started 129596309616384)>']
[2025-11-27 13:49:55] 2025-11-27 20:49:51,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:49:55] 2025-11-27 20:49:51,566 | INFO     | [monitor] control thread has ended
[2025-11-27 13:49:55] 2025-11-27 20:49:55,798 | INFO     | all workflow threads have been joined
[2025-11-27 13:49:55] 2025-11-27 20:49:55,798 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:49:55] 2025-11-27 20:49:55,798 | INFO     | traces error code: 0
[2025-11-27 13:49:55] 2025-11-27 20:49:55,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:49:55] 2025-11-27 20:49:55,853 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:49:55] 2025-11-27 20:49:55,854 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:49:55] 2025-11-27 20:49:55,856 [wrapper] pilotpid: 1513884
[2025-11-27 13:49:55] 2025-11-27 20:49:55,858 [wrapper] Pilot exit status: 0
[2025-11-27 13:49:55] 2025-11-27 20:49:55,863 [wrapper] pandaids: 6896922401
[2025-11-27 13:49:55] 2025-11-27 20:49:55,889 [wrapper] cleanup supervisor_pilot 1906733 1513885
[2025-11-27 13:49:55] 2025-11-27 20:49:55,891 [wrapper] Test setup, not cleaning
[2025-11-27 13:49:55] 2025-11-27 20:49:55,892 [wrapper] apfmon messages muted
[2025-11-27 13:49:55] 2025-11-27 20:49:55,894 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:49:55] 2025-11-27 20:49:55,896 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:49:55]  *** Error codes and diagnostics ***
[2025-11-27 13:49:55]     "exeErrorCode": 0,
[2025-11-27 13:49:55]     "exeErrorDiag": "",
[2025-11-27 13:49:55]     "pilotErrorCode": 0,
[2025-11-27 13:49:55]     "pilotErrorDiag": "",
[2025-11-27 13:49:55]  *** Listing of results directory ***
[2025-11-27 13:49:55] total 1312128
[2025-11-27 13:49:55] -rw-r--r-- 1 boinc boinc    576529 Nov 25 03:51 pilot3.tar.gz
[2025-11-27 13:49:55] -rw-r--r-- 1 boinc boinc      5112 Nov 25 04:09 queuedata.json
[2025-11-27 13:49:55] -rwx------ 1 boinc boinc     36292 Nov 25 04:11 runpilot2-wrapper.sh
[2025-11-27 13:49:55] -rw-r--r-- 1 boinc boinc       100 Nov 27 06:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:49:55] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 06:37 run_atlas
[2025-11-27 13:49:55] -rw-r--r-- 1 boinc boinc       105 Nov 27 06:37 job.xml
[2025-11-27 13:49:55] -rw-r--r-- 1 boinc boinc      9985 Nov 27 06:37 init_data.xml
[2025-11-27 13:49:55] -rw-r--r-- 2 boinc boinc 408672155 Nov 27 06:37 EVNT.47483658._002142.pool.root.1
[2025-11-27 13:49:55] -rw-r--r-- 2 boinc boinc     15847 Nov 27 06:37 start_atlas.sh
[2025-11-27 13:49:55] drwxrwx--x 2 boinc boinc      4096 Nov 27 06:37 shared
[2025-11-27 13:49:55] -rw-r--r-- 2 boinc boinc    590110 Nov 27 06:37 input.tar.gz
[2025-11-27 13:49:55] -rw-r--r-- 1 boinc boinc         0 Nov 27 06:37 boinc_lockfile
[2025-11-27 13:49:55] -rw-r--r-- 1 boinc boinc      2785 Nov 27 06:37 pandaJob.out
[2025-11-27 13:49:55] -rw------- 1 boinc boinc    991588 Nov 27 06:37 agis_schedconf.cvmfs.json
[2025-11-27 13:49:55] drwx------ 5 boinc boinc      4096 Nov 27 06:38 pilot3
[2025-11-27 13:49:55] -rw-r--r-- 1 boinc boinc       532 Nov 27 13:44 boinc_task_state.xml
[2025-11-27 13:49:55] -rw------- 1 boinc boinc 920983116 Nov 27 13:48 HITS.47556161._001258.pool.root.1
[2025-11-27 13:49:55] -rw------- 1 boinc boinc      1031 Nov 27 13:48 memory_monitor_summary.json
[2025-11-27 13:49:55] -rw------- 1 boinc boinc   1516240 Nov 27 13:48 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:49:55] -rw------- 1 boinc boinc   1274164 Nov 27 13:48 log.47556161._001258.job.log.tgz.1
[2025-11-27 13:49:55] -rw------- 1 boinc boinc      8567 Nov 27 13:48 heartbeat.json
[2025-11-27 13:49:55] -rw------- 1 boinc boinc        95 Nov 27 13:49 pilot_heartbeat.json
[2025-11-27 13:49:55] -rw-r--r-- 1 boinc boinc      8192 Nov 27 13:49 boinc_mmap_file
[2025-11-27 13:49:55] -rw-r--r-- 1 boinc boinc        29 Nov 27 13:49 wrapper_checkpoint.txt
[2025-11-27 13:49:55] -rw------- 1 boinc boinc      4831 Nov 27 13:49 pilotlog.txt
[2025-11-27 13:49:55] -rw------- 1 boinc boinc   3744260 Nov 27 13:49 log.47556161._001258.job.log.1
[2025-11-27 13:49:55] -rw------- 1 boinc boinc       353 Nov 27 13:49 output.list
[2025-11-27 13:49:55] -rw-r--r-- 1 boinc boinc       620 Nov 27 13:49 runtime_log
[2025-11-27 13:49:55] -rw------- 1 boinc boinc   5038080 Nov 27 13:49 result.tar.gz
[2025-11-27 13:49:55] -rw-r--r-- 1 boinc boinc      8940 Nov 27 13:49 runtime_log.err
[2025-11-27 13:49:55] -rw------- 1 boinc boinc       665 Nov 27 13:49 Q6wLDmM85h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5QJKDmDotdom.diag
[2025-11-27 13:49:55] -rw-r--r-- 1 boinc boinc     21380 Nov 27 13:49 stderr.txt
[2025-11-27 13:49:55] HITS file was successfully produced:
[2025-11-27 13:49:55] -rw------- 1 boinc boinc 920983116 Nov 27 13:48 shared/HITS.pool.root.1
[2025-11-27 13:49:55]  *** Contents of shared directory: ***
[2025-11-27 13:49:55] total 1304020
[2025-11-27 13:49:55] -rw-r--r-- 2 boinc boinc 408672155 Nov 27 06:37 ATLAS.root_0
[2025-11-27 13:49:55] -rw-r--r-- 2 boinc boinc     15847 Nov 27 06:37 start_atlas.sh
[2025-11-27 13:49:55] -rw-r--r-- 2 boinc boinc    590110 Nov 27 06:37 input.tar.gz
[2025-11-27 13:49:55] -rw------- 1 boinc boinc 920983116 Nov 27 13:48 HITS.pool.root.1
[2025-11-27 13:49:55] -rw------- 1 boinc boinc   5038080 Nov 27 13:49 result.tar.gz
13:49:57 (1510029): run_atlas exited; CPU time 101967.315992
13:49:57 (1510029): called boinc_finish(0)

</stderr_txt>
]]>

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