Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:56:48 (4143483): wrapper (7.7.26015): starting
05:56:48 (4143483): wrapper: running run_atlas (--nthreads 10)
[2025-11-27 05:56:48] Arguments: --nthreads 10
[2025-11-27 05:56:48] Threads: 10
[2025-11-27 05:56:48] Checking for CVMFS
[2025-11-27 05:56:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:56:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:56:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:56:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:56:48] 2.13.2.0 8445 36687 198552 153360 3 349 28468973 40960000 19310 16776704 0 81185228 99.789 41092766 35848 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 05:56:48] CVMFS is ok
[2025-11-27 05:56:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:56:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:56:48] Further information can be found at the LHC@home message board.
[2025-11-27 05:56:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:56:48] Checking for apptainer binary...
[2025-11-27 05:56:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:56:48] Running /usr/bin/apptainer --version
[2025-11-27 05:56:48] apptainer version 1.4.4-1.el9
[2025-11-27 05:56:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:56:49] c-212-2.aglt2.org
[2025-11-27 05:56:49] apptainer works
[2025-11-27 05:56:49] Set ATHENA_PROC_NUMBER=10
[2025-11-27 05:56:49] Set ATHENA_CORE_NUMBER=10
[2025-11-27 05:56:49] Starting ATLAS job with PandaID=6898720512
[2025-11-27 05:56:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:32:08]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:32:08] 2025-11-27 20:31:11,151 | INFO     | time since job start (34447s) is within the limit (172800.0s)
[2025-11-27 15:32:08] 2025-11-27 20:31:11,881 | INFO     | monitor loop #2393: job 0:6898720512 is in state 'finished'
[2025-11-27 15:32:08] 2025-11-27 20:31:11,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:32:08] 2025-11-27 20:31:12,527 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 15:32:08] 2025-11-27 20:31:12,533 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2993.039531250001
[2025-11-27 15:32:08] 2025-11-27 20:31:12,548 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6898720512/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:32:08] 2025-11-27 20:31:12,549 | INFO     | extracted standard info from prmon json
[2025-11-27 15:32:08] 2025-11-27 20:31:12,549 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:32:08] 2025-11-27 20:31:12,549 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:32:08] 2025-11-27 20:31:12,557 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:32:08] 2025-11-27 20:31:12,558 | INFO     | sum of square deviations: 55630408924.913124
[2025-11-27 15:32:08] 2025-11-27 20:31:12,565 | INFO     | sum of deviations: 725292750365.2639
[2025-11-27 15:32:08] 2025-11-27 20:31:12,565 | INFO     | mean x: 1764258230.5124114
[2025-11-27 15:32:08] 2025-11-27 20:31:12,565 | INFO     | mean y: 3166511.033687943
[2025-11-27 15:32:08] 2025-11-27 20:31:12,565 | INFO     | intersect: -22998708346.47526
[2025-11-27 15:32:08] 2025-11-27 20:31:12,566 | INFO     | chi2: 4.522464963669615
[2025-11-27 15:32:08] 2025-11-27 20:31:12,566 | INFO     | sum of square deviations: 54164118369.74242
[2025-11-27 15:32:08] 2025-11-27 20:31:12,573 | INFO     | sum of deviations: 893626798491.1448
[2025-11-27 15:32:08] 2025-11-27 20:31:12,577 | INFO     | mean x: 1764258078.021467
[2025-11-27 15:32:08] 2025-11-27 20:31:12,577 | INFO     | mean y: 3183999.237924866
[2025-11-27 15:32:08] 2025-11-27 20:31:12,577 | INFO     | intersect: -29104430883.59177
[2025-11-27 15:32:08] 2025-11-27 20:31:12,578 | INFO     | chi2: 2.281735661159775
[2025-11-27 15:32:08] 2025-11-27 20:31:12,578 | INFO     | current chi2=2.281735661159775 (change=49.54663707757437 %)
[2025-11-27 15:32:08] 2025-11-27 20:31:12,578 | INFO     | sum of square deviations: 52723692154.194756
[2025-11-27 15:32:08] 2025-11-27 20:31:12,585 | INFO     | sum of deviations: 900129072171.4866
[2025-11-27 15:32:08] 2025-11-27 20:31:12,585 | INFO     | mean x: 1764257925.5234656
[2025-11-27 15:32:08] 2025-11-27 20:31:12,585 | INFO     | mean y: 3184673.80866426
[2025-11-27 15:32:08] 2025-11-27 20:31:12,585 | INFO     | intersect: -30117237183.754303
[2025-11-27 15:32:08] 2025-11-27 20:31:12,586 | INFO     | chi2: 2.18594469109237
[2025-11-27 15:32:08] 2025-11-27 20:31:12,586 | INFO     | current chi2=2.18594469109237 (change=4.198162464565061 %)
[2025-11-27 15:32:08] 2025-11-27 20:31:12,586 | INFO     | right removable region: 553
[2025-11-27 15:32:08] 2025-11-27 20:31:12,587 | INFO     | sum of square deviations: 54163804220.783646
[2025-11-27 15:32:08] 2025-11-27 20:31:12,593 | INFO     | sum of deviations: 559208509729.0708
[2025-11-27 15:32:08] 2025-11-27 20:31:12,593 | INFO     | mean x: 1764258383.0196779
[2025-11-27 15:32:08] 2025-11-27 20:31:12,593 | INFO     | mean y: 3183745.7209302327
[2025-11-27 15:32:08] 2025-11-27 20:31:12,593 | INFO     | intersect: -18211716690.812332
[2025-11-27 15:32:08] 2025-11-27 20:31:12,594 | INFO     | chi2: 2.4475340979486684
[2025-11-27 15:32:08] 2025-11-27 20:31:12,594 | INFO     | current chi2=2.4475340979486684 (change=45.88052936594356 %)
[2025-11-27 15:32:08] 2025-11-27 20:31:12,594 | INFO     | sum of square deviations: 52723336648.28098
[2025-11-27 15:32:08] 2025-11-27 20:31:12,601 | INFO     | sum of deviations: 520375807330.3642
[2025-11-27 15:32:08] 2025-11-27 20:31:12,601 | INFO     | mean x: 1764258535.5198555
[2025-11-27 15:32:08] 2025-11-27 20:31:12,601 | INFO     | mean y: 3187853.057761733
[2025-11-27 15:32:08] 2025-11-27 20:31:12,601 | INFO     | intersect: -17409925923.961967
[2025-11-27 15:32:08] 2025-11-27 20:31:12,602 | INFO     | chi2: 2.406898305981003
[2025-11-27 15:32:08] 2025-11-27 20:31:12,602 | INFO     | current chi2=2.406898305981003 (change=1.6602748048218385 %)
[2025-11-27 15:32:08] 2025-11-27 20:31:12,602 | INFO     | left removable region: 20
[2025-11-27 15:32:08] 2025-11-27 20:31:12,602 | INFO     | sum of square deviations: 46952265386.4578
[2025-11-27 15:32:08] 2025-11-27 20:31:12,608 | INFO     | sum of deviations: 633811976416.8125
[2025-11-27 15:32:08] 2025-11-27 20:31:12,608 | INFO     | mean x: 1764258505.031895
[2025-11-27 15:32:08] 2025-11-27 20:31:12,608 | INFO     | mean y: 3213041.363977486
[2025-11-27 15:32:08] 2025-11-27 20:31:12,608 | INFO     | intersect: -23812638244.630737
[2025-11-27 15:32:08] 2025-11-27 20:31:12,609 | INFO     | chi2: 0.03461680147870516
[2025-11-27 15:32:08] 2025-11-27 20:31:12,609 | INFO     | current memory leak: 13.50 B/s (using 533 data points, chi2=0.03)
[2025-11-27 15:32:08] 2025-11-27 20:31:12,610 | INFO     | could have reported an average CPU frequency of 3058 MHz (22 samples)
[2025-11-27 15:32:08] 2025-11-27 20:31:12,610 | INFO     | ..............................
[2025-11-27 15:32:08] 2025-11-27 20:31:12,610 | INFO     | . Timing measurements:
[2025-11-27 15:32:08] 2025-11-27 20:31:12,610 | INFO     | . get job = 0 s
[2025-11-27 15:32:08] 2025-11-27 20:31:12,610 | INFO     | . initial setup = 2 s
[2025-11-27 15:32:08] 2025-11-27 20:31:12,610 | INFO     | . payload setup = 8 s
[2025-11-27 15:32:08] 2025-11-27 20:31:12,610 | INFO     | . stage-in = 0 s
[2025-11-27 15:32:08] 2025-11-27 20:31:12,611 | INFO     | . payload execution = 34406 s
[2025-11-27 15:32:08] 2025-11-27 20:31:12,611 | INFO     | . stage-out = 3 s
[2025-11-27 15:32:08] 2025-11-27 20:31:12,611 | INFO     | . log creation = 0 s
[2025-11-27 15:32:08] 2025-11-27 20:31:12,611 | INFO     | ..............................
[2025-11-27 15:32:08] 2025-11-27 20:31:12,712 | INFO     | 
[2025-11-27 15:32:08] 2025-11-27 20:31:12,712 | INFO     | job summary report
[2025-11-27 15:32:08] 2025-11-27 20:31:12,712 | INFO     | --------------------------------------------------
[2025-11-27 15:32:08] 2025-11-27 20:31:12,712 | INFO     | PanDA job id: 6898720512
[2025-11-27 15:32:08] 2025-11-27 20:31:12,712 | INFO     | task id: 47556173
[2025-11-27 15:32:08] 2025-11-27 20:31:12,713 | INFO     | errors: (none)
[2025-11-27 15:32:08] 2025-11-27 20:31:12,713 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:32:08] 2025-11-27 20:31:12,713 | INFO     | pilot state: finished 
[2025-11-27 15:32:08] 2025-11-27 20:31:12,713 | INFO     | transexitcode: 0
[2025-11-27 15:32:08] 2025-11-27 20:31:12,713 | INFO     | exeerrorcode: 0
[2025-11-27 15:32:08] 2025-11-27 20:31:12,713 | INFO     | exeerrordiag: 
[2025-11-27 15:32:08] 2025-11-27 20:31:12,713 | INFO     | exitcode: 0
[2025-11-27 15:32:08] 2025-11-27 20:31:12,713 | INFO     | exitmsg: OK
[2025-11-27 15:32:08] 2025-11-27 20:31:12,713 | INFO     | cpuconsumptiontime: 204024 s
[2025-11-27 15:32:08] 2025-11-27 20:31:12,713 | INFO     | nevents: 1000
[2025-11-27 15:32:08] 2025-11-27 20:31:12,713 | INFO     | neventsw: 0
[2025-11-27 15:32:08] 2025-11-27 20:31:12,713 | INFO     | pid: 4159253
[2025-11-27 15:32:08] 2025-11-27 20:31:12,713 | INFO     | pgrp: 4159253
[2025-11-27 15:32:08] 2025-11-27 20:31:12,713 | INFO     | corecount: 10
[2025-11-27 15:32:08] 2025-11-27 20:31:12,714 | INFO     | event service: False
[2025-11-27 15:32:08] 2025-11-27 20:31:12,714 | INFO     | sizes: {0: 2283487, 1: 2284343, 8: 2284605, 12: 2284633, 34418: 2325578, 34422: 2334572, 34423: 2334756, 34431: 2335002}
[2025-11-27 15:32:08] 2025-11-27 20:31:12,714 | INFO     | --------------------------------------------------
[2025-11-27 15:32:08] 2025-11-27 20:31:12,714 | INFO     | 
[2025-11-27 15:32:08] 2025-11-27 20:31:12,714 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 15:32:08] 2025-11-27 20:31:12,737 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,737 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,737 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,737 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,739 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:32:08] 2025-11-27 20:31:12,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,739 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:32:08] 2025-11-27 20:31:12,739 | INFO     | job 6898720512 has completed (purged errors)
[2025-11-27 15:32:08] 2025-11-27 20:31:12,739 | INFO     | overall cleanup function is called
[2025-11-27 15:32:08] 2025-11-27 20:31:13,767 | INFO     | --- collectZombieJob: --- 10, [4159253]
[2025-11-27 15:32:08] 2025-11-27 20:31:13,767 | INFO     | zombie collector waiting for pid 4159253
[2025-11-27 15:32:08] 2025-11-27 20:31:13,767 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:32:08] 2025-11-27 20:31:13,767 | INFO     | collected zombie processes
[2025-11-27 15:32:08] 2025-11-27 20:31:13,767 | INFO     | will attempt to kill all subprocesses of pid=4159253
[2025-11-27 15:32:08] 2025-11-27 20:31:14,231 | INFO     | process IDs to be killed: [4159253] (in reverse order)
[2025-11-27 15:32:08] 2025-11-27 20:31:14,377 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:32:08] 2025-11-27 20:31:14,378 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:32:08] 2025-11-27 20:31:14,394 | INFO     | did not find any defunct processes belonging to 4159253
[2025-11-27 15:32:08] 2025-11-27 20:31:14,409 | INFO     | did not find any defunct processes belonging to 4159253
[2025-11-27 15:32:08] 2025-11-27 20:31:14,410 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:32:08] 2025-11-27 20:31:14,411 | INFO     | ready for new job
[2025-11-27 15:32:08] 2025-11-27 20:31:14,411 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:32:08] 2025-11-27 20:31:14,414 | INFO     | ***************************************
[2025-11-27 15:32:08] 2025-11-27 20:31:14,414 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:32:08] 2025-11-27 20:31:14,414 | INFO     | ***************************************
[2025-11-27 15:32:08] 2025-11-27 20:31:14,414 | INFO     | 
[2025-11-27 15:32:08] 2025-11-27 20:31:14,419 | INFO     | architecture information:
[2025-11-27 15:32:08] 2025-11-27 20:31:14,428 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:32:08] 2025-11-27 20:31:14,447 | INFO     | cat /etc/os-release:
[2025-11-27 15:32:08] NAME="CentOS Linux"
[2025-11-27 15:32:08] VERSION="7 (Core)"
[2025-11-27 15:32:08] ID="centos"
[2025-11-27 15:32:08] ID_LIKE="rhel fedora"
[2025-11-27 15:32:08] VERSION_ID="7"
[2025-11-27 15:32:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:32:08] ANSI_COLOR="0;31"
[2025-11-27 15:32:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:32:08] HOME_URL="https://www.centos.org/"
[2025-11-27 15:32:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:32:08] 
[2025-11-27 15:32:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:32:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:32:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:32:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:32:08] 
[2025-11-27 15:32:08] 2025-11-27 20:31:14,447 | INFO     | ***************************************
[2025-11-27 15:32:08] 2025-11-27 20:31:14,956 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 15:32:08] 2025-11-27 20:31:15,041 | INFO     | sufficient remaining disk space (121245794304 B)
[2025-11-27 15:32:08] 2025-11-27 20:31:15,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:32:08] 2025-11-27 20:31:15,042 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:32:08] 2025-11-27 20:31:15,042 | INFO     | update_server=False
[2025-11-27 15:32:08] 2025-11-27 20:31:15,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:32:08] 2025-11-27 20:31:15,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:32:08] 2025-11-27 20:31:15,392 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:32:08] 2025-11-27 20:31:15,392 | INFO     | aborting loop
[2025-11-27 15:32:08] 2025-11-27 20:31:15,483 | INFO     | all data control threads have been joined
[2025-11-27 15:32:08] 2025-11-27 20:31:15,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:32:08] 2025-11-27 20:31:15,920 | INFO     | all job control threads have been joined
[2025-11-27 15:32:08] 2025-11-27 20:31:16,048 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:16,166 | INFO     | all payload control threads have been joined
[2025-11-27 15:32:08] 2025-11-27 20:31:16,271 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:16,361 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:16,398 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:16,424 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:16,489 | INFO     | [data] control thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:16,871 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:16,879 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:16,925 | INFO     | [job] control thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:17,049 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:17,119 | INFO     | [job] validate thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:17,171 | INFO     | [payload] control thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:17,265 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:17,400 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:17,727 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:32:08] 2025-11-27 20:31:18,733 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:19,781 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:32:08] 2025-11-27 20:31:44,852 | INFO     | PID=4147335 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:32:08] 2025-11-27 20:31:44,852 | INFO     | .. there are 18 such processes running
[2025-11-27 15:32:08] 2025-11-27 20:31:44,852 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:32:08] 2025-11-27 20:31:44,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:32:08] 2025-11-27 20:31:44,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:32:08] 2025-11-27 20:32:02,159 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:32:08] 2025-11-27 20:32:03,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139722525837120)>', '<ExcThread(monitor, started 139722156386048)>']
[2025-11-27 15:32:08] 2025-11-27 20:32:03,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:32:08] 2025-11-27 20:32:03,955 | INFO     | [monitor] control thread has ended
[2025-11-27 15:32:08] 2025-11-27 20:32:08,436 | INFO     | all workflow threads have been joined
[2025-11-27 15:32:08] 2025-11-27 20:32:08,436 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:32:08] 2025-11-27 20:32:08,436 | INFO     | traces error code: 0
[2025-11-27 15:32:08] 2025-11-27 20:32:08,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:32:08] 2025-11-27 20:32:08,582 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:32:08] 2025-11-27 20:32:08,602 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:32:08] 2025-11-27 20:32:08,605 [wrapper] pilotpid: 4147335
[2025-11-27 15:32:08] 2025-11-27 20:32:08,608 [wrapper] Pilot exit status: 0
[2025-11-27 15:32:08] 2025-11-27 20:32:08,630 [wrapper] pandaids: 6898720512
[2025-11-27 15:32:08] 2025-11-27 20:32:08,720 [wrapper] cleanup supervisor_pilot 1176190 4147336
[2025-11-27 15:32:08] 2025-11-27 20:32:08,725 [wrapper] Test setup, not cleaning
[2025-11-27 15:32:08] 2025-11-27 20:32:08,728 [wrapper] apfmon messages muted
[2025-11-27 15:32:08] 2025-11-27 20:32:08,731 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:32:08] 2025-11-27 20:32:08,734 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:32:08]  *** Error codes and diagnostics ***
[2025-11-27 15:32:08]     "exeErrorCode": 0,
[2025-11-27 15:32:08]     "exeErrorDiag": "",
[2025-11-27 15:32:08]     "pilotErrorCode": 0,
[2025-11-27 15:32:08]     "pilotErrorDiag": "",
[2025-11-27 15:32:08]  *** Listing of results directory ***
[2025-11-27 15:32:08] total 1313336
[2025-11-27 15:32:08] -rwx------. 1 boincer umatlas     36292 Nov 26 17:01 runpilot2-wrapper.sh
[2025-11-27 15:32:08] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 17:01 queuedata.json
[2025-11-27 15:32:08] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 17:01 pilot3.tar.gz
[2025-11-27 15:32:08] -rw-r--r--. 1 boincer umatlas       100 Nov 27 05:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:32:08] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 05:56 run_atlas
[2025-11-27 15:32:08] -rw-r--r--. 1 boincer umatlas       105 Nov 27 05:56 job.xml
[2025-11-27 15:32:08] -rw-r--r--. 2 boincer umatlas 406183249 Nov 27 05:56 EVNT.47483658._003228.pool.root.1
[2025-11-27 15:32:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:56 start_atlas.sh
[2025-11-27 15:32:08] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 05:56 shared
[2025-11-27 15:32:08] -rw-r--r--. 2 boincer umatlas    590100 Nov 27 05:56 input.tar.gz
[2025-11-27 15:32:08] -rw-r--r--. 1 boincer umatlas         0 Nov 27 05:56 boinc_lockfile
[2025-11-27 15:32:08] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 05:56 pandaJob.out
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas        57 Nov 27 05:56 setup.sh.local
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas    991564 Nov 27 05:57 agis_schedconf.cvmfs.json
[2025-11-27 15:32:08] drwx------. 5 boincer umatlas      4096 Nov 27 05:57 pilot3
[2025-11-27 15:32:08] -rw-r--r--. 1 boincer umatlas       532 Nov 27 15:22 boinc_task_state.xml
[2025-11-27 15:32:08] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 15:28 init_data.xml
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas 921091583 Nov 27 15:30 HITS.47556173._001848.pool.root.1
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas      1051 Nov 27 15:30 memory_monitor_summary.json
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas   1516240 Nov 27 15:31 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas   2072841 Nov 27 15:31 log.47556173._001848.job.log.tgz.1
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas        95 Nov 27 15:31 pilot_heartbeat.json
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas      8593 Nov 27 15:31 heartbeat.json
[2025-11-27 15:32:08] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 15:32 boinc_mmap_file
[2025-11-27 15:32:08] -rw-r--r--. 1 boincer umatlas        29 Nov 27 15:32 wrapper_checkpoint.txt
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas      4825 Nov 27 15:32 pilotlog.txt
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas   4752967 Nov 27 15:32 log.47556173._001848.job.log.1
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas       353 Nov 27 15:32 output.list
[2025-11-27 15:32:08] -rw-r--r--. 1 boincer umatlas       620 Nov 27 15:32 runtime_log
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas   6850560 Nov 27 15:32 result.tar.gz
[2025-11-27 15:32:08] -rw-r--r--. 1 boincer umatlas      9340 Nov 27 15:32 runtime_log.err
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas       659 Nov 27 15:32 CZANDmckci8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVFKKDmXSOPxn.diag
[2025-11-27 15:32:08] -rw-r--r--. 1 boincer umatlas     21337 Nov 27 15:32 stderr.txt
[2025-11-27 15:32:08] HITS file was successfully produced:
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas 921091583 Nov 27 15:30 shared/HITS.pool.root.1
[2025-11-27 15:32:08]  *** Contents of shared directory: ***
[2025-11-27 15:32:08] total 1303464
[2025-11-27 15:32:08] -rw-r--r--. 2 boincer umatlas 406183249 Nov 27 05:56 ATLAS.root_0
[2025-11-27 15:32:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:56 start_atlas.sh
[2025-11-27 15:32:08] -rw-r--r--. 2 boincer umatlas    590100 Nov 27 05:56 input.tar.gz
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas 921091583 Nov 27 15:30 HITS.pool.root.1
[2025-11-27 15:32:08] -rw-------. 1 boincer umatlas   6850560 Nov 27 15:32 result.tar.gz
15:32:09 (4143483): run_atlas exited; CPU time 204045.340627
15:32:09 (4143483): called boinc_finish(0)

</stderr_txt>
]]>

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