Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:01:29 (2857126): wrapper (7.7.26015): starting
05:01:29 (2857126): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 05:01:29] Arguments: --nthreads 8
[2025-11-27 05:01:29] Threads: 8
[2025-11-27 05:01:29] Checking for CVMFS
[2025-11-27 05:01:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:01:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:01:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:01:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:01:31] 2.13.3.0 13122 31345 374156 153358 0 530 27708614 32935936 48054 16776704 0 164044391 99.595 171716860 35713 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 05:01:31] CVMFS is ok
[2025-11-27 05:01:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:01:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:01:31] Further information can be found at the LHC@home message board.
[2025-11-27 05:01:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:01:31] Checking for apptainer binary...
[2025-11-27 05:01:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:01:31] Running /usr/bin/apptainer --version
[2025-11-27 05:01:31] apptainer version 1.4.4-1.el9
[2025-11-27 05:01:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:01:32] c6-8-25-2.aglt2.org
[2025-11-27 05:01:32] apptainer works
[2025-11-27 05:01:32] Set ATHENA_PROC_NUMBER=8
[2025-11-27 05:01:32] Set ATHENA_CORE_NUMBER=8
[2025-11-27 05:01:32] Starting ATLAS job with PandaID=6896988817
[2025-11-27 05:01:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:40:17]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:40:17] 2025-11-27 20:52:01,597 | INFO     | mean x: 1764257280.0172684
[2025-11-27 17:40:17] 2025-11-27 20:52:01,597 | INFO     | mean y: 2855819.136577708
[2025-11-27 17:40:17] 2025-11-27 20:52:01,597 | INFO     | intersect: -14556667673.649223
[2025-11-27 17:40:17] 2025-11-27 20:52:01,598 | INFO     | chi2: 9.88409328126635
[2025-11-27 17:40:17] 2025-11-27 20:52:01,603 | INFO     | sum of square deviations: 78266592773.59486
[2025-11-27 17:40:17] 2025-11-27 20:52:01,620 | INFO     | sum of deviations: 878500597186.696
[2025-11-27 17:40:17] 2025-11-27 20:52:01,621 | INFO     | mean x: 1764257127.5253165
[2025-11-27 17:40:17] 2025-11-27 20:52:01,621 | INFO     | mean y: 2873495.268987342
[2025-11-27 17:40:17] 2025-11-27 20:52:01,622 | INFO     | intersect: -19799968115.65102
[2025-11-27 17:40:17] 2025-11-27 20:52:01,627 | INFO     | chi2: 6.554475454293071
[2025-11-27 17:40:17] 2025-11-27 20:52:01,627 | INFO     | current chi2=6.554475454293071 (change=33.6866289322058 %)
[2025-11-27 17:40:17] 2025-11-27 20:52:01,628 | INFO     | sum of square deviations: 76423630268.29663
[2025-11-27 17:40:17] 2025-11-27 20:52:01,641 | INFO     | time since job start (38970s) is within the limit (172800.0s)
[2025-11-27 17:40:17] 2025-11-27 20:52:01,645 | INFO     | sum of deviations: 1022432921530.0681
[2025-11-27 17:40:17] 2025-11-27 20:52:01,645 | INFO     | mean x: 1764256975.0334928
[2025-11-27 17:40:17] 2025-11-27 20:52:01,645 | INFO     | mean y: 2885383.3301435406
[2025-11-27 17:40:17] 2025-11-27 20:52:01,645 | INFO     | intersect: -23600212336.32362
[2025-11-27 17:40:17] 2025-11-27 20:52:01,646 | INFO     | chi2: 4.810759962535396
[2025-11-27 17:40:17] 2025-11-27 20:52:01,646 | INFO     | current chi2=4.810759962535396 (change=26.603433088082895 %)
[2025-11-27 17:40:17] 2025-11-27 20:52:01,651 | INFO     | sum of square deviations: 74609792976.49524
[2025-11-27 17:40:17] 2025-11-27 20:52:01,668 | INFO     | sum of deviations: 1048531329133.1832
[2025-11-27 17:40:17] 2025-11-27 20:52:01,668 | INFO     | mean x: 1764256822.5401928
[2025-11-27 17:40:17] 2025-11-27 20:52:01,668 | INFO     | mean y: 2887569.9726688103
[2025-11-27 17:40:17] 2025-11-27 20:52:01,669 | INFO     | intersect: -24791157250.03016
[2025-11-27 17:40:17] 2025-11-27 20:52:01,669 | INFO     | chi2: 4.658689372540555
[2025-11-27 17:40:17] 2025-11-27 20:52:01,669 | INFO     | current chi2=4.658689372540555 (change=3.1610512929166474 %)
[2025-11-27 17:40:17] 2025-11-27 20:52:01,670 | INFO     | right removable region: 621
[2025-11-27 17:40:17] 2025-11-27 20:52:01,674 | INFO     | sum of square deviations: 78266197493.5949
[2025-11-27 17:40:17] 2025-11-27 20:52:01,690 | INFO     | monitor loop #2121: job 0:6896988817 is in state 'finished'
[2025-11-27 17:40:17] 2025-11-27 20:52:01,691 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:40:17] 2025-11-27 20:52:01,692 | INFO     | sum of deviations: 416984399110.0948
[2025-11-27 17:40:17] 2025-11-27 20:52:01,692 | INFO     | mean x: 1764257432.5253165
[2025-11-27 17:40:17] 2025-11-27 20:52:01,692 | INFO     | mean y: 2875710.400316456
[2025-11-27 17:40:17] 2025-11-27 20:52:01,692 | INFO     | intersect: -9396684367.081318
[2025-11-27 17:40:17] 2025-11-27 20:52:01,693 | INFO     | chi2: 6.02128912721958
[2025-11-27 17:40:17] 2025-11-27 20:52:01,693 | INFO     | current chi2=6.02128912721958 (change=39.0810167824708 %)
[2025-11-27 17:40:17] 2025-11-27 20:52:01,698 | INFO     | sum of square deviations: 76423031857.59149
[2025-11-27 17:40:17] 2025-11-27 20:52:01,715 | INFO     | sum of deviations: 332517261724.81006
[2025-11-27 17:40:17] 2025-11-27 20:52:01,716 | INFO     | mean x: 1764257585.0255184
[2025-11-27 17:40:17] 2025-11-27 20:52:01,716 | INFO     | mean y: 2882682.1993620414
[2025-11-27 17:40:17] 2025-11-27 20:52:01,716 | INFO     | intersect: -7673417078.363423
[2025-11-27 17:40:17] 2025-11-27 20:52:01,717 | INFO     | chi2: 5.4890624181145125
[2025-11-27 17:40:17] 2025-11-27 20:52:01,717 | INFO     | current chi2=5.4890624181145125 (change=8.839082426703387 %)
[2025-11-27 17:40:17] 2025-11-27 20:52:01,717 | INFO     | left removable region: 20
[2025-11-27 17:40:17] 2025-11-27 20:52:01,718 | INFO     | sum of square deviations: 67304929488.958374
[2025-11-27 17:40:17] 2025-11-27 20:52:01,740 | INFO     | sum of deviations: 638906758383.5662
[2025-11-27 17:40:17] 2025-11-27 20:52:01,740 | INFO     | mean x: 1764257402.0083194
[2025-11-27 17:40:17] 2025-11-27 20:52:01,745 | INFO     | mean y: 2922535.8868552414
[2025-11-27 17:40:17] 2025-11-27 20:52:01,745 | INFO     | intersect: -16744676580.99905
[2025-11-27 17:40:17] 2025-11-27 20:52:01,746 | INFO     | chi2: 0.07745445276901158
[2025-11-27 17:40:17] 2025-11-27 20:52:01,746 | INFO     | current memory leak: 9.49 B/s (using 601 data points, chi2=0.08)
[2025-11-27 17:40:17] 2025-11-27 20:52:01,751 | INFO     | could have reported an average CPU frequency of 2710 MHz (25 samples)
[2025-11-27 17:40:17] 2025-11-27 20:52:01,755 | INFO     | ..............................
[2025-11-27 17:40:17] 2025-11-27 20:52:01,756 | INFO     | . Timing measurements:
[2025-11-27 17:40:17] 2025-11-27 20:52:01,756 | INFO     | . get job = 0 s
[2025-11-27 17:40:17] 2025-11-27 20:52:01,756 | INFO     | . initial setup = 4 s
[2025-11-27 17:40:17] 2025-11-27 20:52:01,756 | INFO     | . payload setup = 34 s
[2025-11-27 17:40:17] 2025-11-27 20:52:01,756 | INFO     | . stage-in = 0 s
[2025-11-27 17:40:17] 2025-11-27 20:52:01,756 | INFO     | . payload execution = 38833 s
[2025-11-27 17:40:17] 2025-11-27 20:52:01,756 | INFO     | . stage-out = 15 s
[2025-11-27 17:40:17] 2025-11-27 20:52:01,756 | INFO     | . log creation = 4 s
[2025-11-27 17:40:17] 2025-11-27 20:52:01,756 | INFO     | ..............................
[2025-11-27 17:40:17] 2025-11-27 20:52:01,984 | INFO     | 
[2025-11-27 17:40:17] 2025-11-27 20:52:01,985 | INFO     | job summary report
[2025-11-27 17:40:17] 2025-11-27 20:52:01,985 | INFO     | --------------------------------------------------
[2025-11-27 17:40:17] 2025-11-27 20:52:01,985 | INFO     | PanDA job id: 6896988817
[2025-11-27 17:40:17] 2025-11-27 20:52:01,985 | INFO     | task id: 47556161
[2025-11-27 17:40:17] 2025-11-27 20:52:01,985 | INFO     | errors: (none)
[2025-11-27 17:40:17] 2025-11-27 20:52:01,985 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:40:17] 2025-11-27 20:52:01,985 | INFO     | pilot state: finished 
[2025-11-27 17:40:17] 2025-11-27 20:52:01,985 | INFO     | transexitcode: 0
[2025-11-27 17:40:17] 2025-11-27 20:52:01,985 | INFO     | exeerrorcode: 0
[2025-11-27 17:40:17] 2025-11-27 20:52:01,985 | INFO     | exeerrordiag: 
[2025-11-27 17:40:17] 2025-11-27 20:52:01,986 | INFO     | exitcode: 0
[2025-11-27 17:40:17] 2025-11-27 20:52:01,986 | INFO     | exitmsg: OK
[2025-11-27 17:40:17] 2025-11-27 20:52:01,986 | INFO     | cpuconsumptiontime: 245388 s
[2025-11-27 17:40:17] 2025-11-27 20:52:01,986 | INFO     | nevents: 1000
[2025-11-27 17:40:17] 2025-11-27 20:52:01,986 | INFO     | neventsw: 0
[2025-11-27 17:40:17] 2025-11-27 20:52:01,986 | INFO     | pid: 2883292
[2025-11-27 17:40:17] 2025-11-27 20:52:01,986 | INFO     | pgrp: 2883292
[2025-11-27 17:40:17] 2025-11-27 20:52:01,986 | INFO     | corecount: 8
[2025-11-27 17:40:17] 2025-11-27 20:52:01,986 | INFO     | event service: False
[2025-11-27 17:40:17] 2025-11-27 20:52:01,986 | INFO     | sizes: {0: 2283980, 1: 2284064, 2: 2284235, 3: 2284263, 13: 2284291, 24: 2284347, 32: 2284765, 35: 2284793, 38874: 2327253, 38891: 2336275, 38892: 2336331, 38906: 
[2025-11-27 17:40:17] 2025-11-27 20:52:01,986 | INFO     | --------------------------------------------------
[2025-11-27 17:40:17] 2025-11-27 20:52:01,986 | INFO     | 
[2025-11-27 17:40:17] 2025-11-27 20:52:01,986 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 17:40:17] 2025-11-27 20:52:02,193 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,193 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,194 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,194 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,194 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,194 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,194 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,194 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,194 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,194 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,194 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,195 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:40:17] 2025-11-27 20:52:02,195 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,195 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:40:17] 2025-11-27 20:52:02,195 | INFO     | job 6896988817 has completed (purged errors)
[2025-11-27 17:40:17] 2025-11-27 20:52:02,195 | INFO     | overall cleanup function is called
[2025-11-27 17:40:17] 2025-11-27 20:52:03,404 | INFO     | --- collectZombieJob: --- 10, [2883292]
[2025-11-27 17:40:17] 2025-11-27 20:52:03,405 | INFO     | zombie collector waiting for pid 2883292
[2025-11-27 17:40:17] 2025-11-27 20:52:03,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:40:17] 2025-11-27 20:52:03,405 | INFO     | collected zombie processes
[2025-11-27 17:40:17] 2025-11-27 20:52:03,405 | INFO     | will attempt to kill all subprocesses of pid=2883292
[2025-11-27 17:40:17] 2025-11-27 20:52:05,308 | INFO     | PID=2866219 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 17:40:17] 2025-11-27 20:52:05,309 | INFO     | .. there are 60 such processes running
[2025-11-27 17:40:17] 2025-11-27 20:52:06,644 | INFO     | process IDs to be killed: [2883292] (in reverse order)
[2025-11-27 17:40:17] 2025-11-27 20:52:07,000 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:40:17] 2025-11-27 20:52:07,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:40:17] 2025-11-27 20:52:07,117 | INFO     | did not find any defunct processes belonging to 2883292
[2025-11-27 17:40:17] 2025-11-27 20:52:07,177 | INFO     | did not find any defunct processes belonging to 2883292
[2025-11-27 17:40:17] 2025-11-27 20:52:07,179 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:40:17] 2025-11-27 20:52:07,180 | INFO     | ready for new job
[2025-11-27 17:40:17] 2025-11-27 20:52:07,181 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:40:17] 2025-11-27 20:52:07,193 | INFO     | ***************************************
[2025-11-27 17:40:17] 2025-11-27 20:52:07,193 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:40:17] 2025-11-27 20:52:07,193 | INFO     | ***************************************
[2025-11-27 17:40:17] 2025-11-27 20:52:07,194 | INFO     | 
[2025-11-27 17:40:17] 2025-11-27 20:52:07,203 | INFO     | architecture information:
[2025-11-27 17:40:17] 2025-11-27 20:52:07,216 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:40:17] 2025-11-27 20:52:07,238 | INFO     | cat /etc/os-release:
[2025-11-27 17:40:17] NAME="CentOS Linux"
[2025-11-27 17:40:17] VERSION="7 (Core)"
[2025-11-27 17:40:17] ID="centos"
[2025-11-27 17:40:17] ID_LIKE="rhel fedora"
[2025-11-27 17:40:17] VERSION_ID="7"
[2025-11-27 17:40:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:40:17] ANSI_COLOR="0;31"
[2025-11-27 17:40:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:40:17] HOME_URL="https://www.centos.org/"
[2025-11-27 17:40:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:40:17] 
[2025-11-27 17:40:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:40:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:40:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:40:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:40:17] 
[2025-11-27 17:40:17] 2025-11-27 20:52:07,239 | INFO     | ***************************************
[2025-11-27 17:40:17] 2025-11-27 20:52:07,745 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 17:40:17] 2025-11-27 20:52:07,895 | INFO     | sufficient remaining disk space (66711453696 B)
[2025-11-27 17:40:17] 2025-11-27 20:52:07,895 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:40:17] 2025-11-27 20:52:07,895 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:40:17] 2025-11-27 20:52:07,896 | INFO     | update_server=False
[2025-11-27 17:40:17] 2025-11-27 20:52:07,896 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:40:17] 2025-11-27 20:52:07,901 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:40:17] 2025-11-27 20:52:07,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:40:17] 2025-11-27 20:52:07,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:40:17] 2025-11-27 20:52:07,902 | INFO     | aborting loop
[2025-11-27 17:40:17] 2025-11-27 20:52:07,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:40:17] 2025-11-27 20:52:08,271 | INFO     | all job control threads have been joined
[2025-11-27 17:40:17] 2025-11-27 20:52:08,474 | INFO     | all payload control threads have been joined
[2025-11-27 17:40:17] 2025-11-27 20:52:08,675 | INFO     | all data control threads have been joined
[2025-11-27 17:40:17] 2025-11-27 20:52:08,902 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:08,908 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:08,914 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:09,001 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:09,277 | INFO     | [job] control thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:09,286 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:09,410 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:09,480 | INFO     | [payload] control thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:09,505 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:09,681 | INFO     | [data] control thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:09,927 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:09,933 | INFO     | [job] validate thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:09,934 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:09,945 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:09,990 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:11,927 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:40:17] 2025-11-27 20:52:40,294 | INFO     | PID=2866219 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 17:40:17] 2025-11-27 20:52:40,294 | INFO     | .. there are 60 such processes running
[2025-11-27 17:40:17] 2025-11-27 20:52:40,294 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:40:17] 2025-11-27 20:52:40,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:40:17] 2025-11-27 20:52:40,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:40:17] 2025-11-27 20:52:42,036 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:40:17] 2025-11-27 20:52:43,053 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140351343777600)>', '<ExcThread(monitor, started 140350849009408)>']
[2025-11-27 17:40:17] 2025-11-27 20:52:43,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:40:17] 2025-11-27 20:52:43,313 | INFO     | [monitor] control thread has ended
[2025-11-27 17:40:17] 2025-11-27 20:52:48,101 | INFO     | all workflow threads have been joined
[2025-11-27 17:40:17] 2025-11-27 20:52:48,102 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:40:17] 2025-11-27 20:52:48,102 | INFO     | traces error code: 0
[2025-11-27 17:40:17] 2025-11-27 20:52:48,102 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:40:17] 2025-11-27 20:52:49,841 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:40:17] 2025-11-27 20:52:49,857 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:40:17] 2025-11-27 20:52:49,872 [wrapper] pilotpid: 2866219
[2025-11-27 17:40:17] 2025-11-27 20:52:49,893 [wrapper] Pilot exit status: 0
[2025-11-27 17:40:17] 2025-11-27 20:52:49,971 [wrapper] pandaids: 6896988817
[2025-11-27 17:40:17] 2025-11-27 20:52:50,360 [wrapper] cleanup supervisor_pilot 1553992 2866220
[2025-11-27 17:40:17] 2025-11-27 20:52:50,366 [wrapper] Test setup, not cleaning
[2025-11-27 17:40:17] 2025-11-27 20:52:50,369 [wrapper] apfmon messages muted
[2025-11-27 17:40:17] 2025-11-27 20:52:50,371 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:40:17] 2025-11-27 20:52:50,373 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:40:17]  *** Error codes and diagnostics ***
[2025-11-27 17:40:17]     "exeErrorCode": 0,
[2025-11-27 17:40:17]     "exeErrorDiag": "",
[2025-11-27 17:40:17]     "pilotErrorCode": 0,
[2025-11-27 17:40:17]     "pilotErrorDiag": "",
[2025-11-27 17:40:17]  *** Listing of results directory ***
[2025-11-27 17:40:17] total 1316860
[2025-11-27 17:40:17] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 06:41 pilot3.tar.gz
[2025-11-27 17:40:17] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 06:47 queuedata.json
[2025-11-27 17:40:17] -rwx------. 1 boincer umatlas     36292 Nov 25 06:48 runpilot2-wrapper.sh
[2025-11-27 17:40:17] -rw-r--r--. 1 boincer umatlas       100 Nov 27 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:40:17] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 05:01 run_atlas
[2025-11-27 17:40:17] -rw-r--r--. 1 boincer umatlas       105 Nov 27 05:01 job.xml
[2025-11-27 17:40:17] -rw-r--r--. 2 boincer umatlas 411242338 Nov 27 05:01 EVNT.47483658._002154.pool.root.1
[2025-11-27 17:40:17] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 05:01 shared
[2025-11-27 17:40:17] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 05:01 input.tar.gz
[2025-11-27 17:40:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:01 start_atlas.sh
[2025-11-27 17:40:17] -rw-r--r--. 1 boincer umatlas         0 Nov 27 05:01 boinc_lockfile
[2025-11-27 17:40:17] -rw-r--r--. 1 boincer umatlas      2781 Nov 27 05:01 pandaJob.out
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas        57 Nov 27 05:01 setup.sh.local
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas    991551 Nov 27 05:02 agis_schedconf.cvmfs.json
[2025-11-27 17:40:17] drwx------. 5 boincer umatlas      4096 Nov 27 05:02 pilot3
[2025-11-27 17:40:17] -rw-r--r--. 1 boincer umatlas       533 Nov 27 15:36 boinc_task_state.xml
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas 920313773 Nov 27 15:49 HITS.47556161._001371.pool.root.1
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas      1059 Nov 27 15:51 memory_monitor_summary.json
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas   1516240 Nov 27 15:51 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas   1856988 Nov 27 15:51 log.47556161._001371.job.log.tgz.1
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas        95 Nov 27 15:51 pilot_heartbeat.json
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas      8623 Nov 27 15:52 heartbeat.json
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas      4824 Nov 27 15:52 pilotlog.txt
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas   4638850 Nov 27 15:52 log.47556161._001371.job.log.1
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas       353 Nov 27 15:52 output.list
[2025-11-27 17:40:17] -rw-r--r--. 1 boincer umatlas       620 Nov 27 15:52 runtime_log
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas   6512640 Nov 27 15:52 result.tar.gz
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas       661 Nov 27 15:52 W2zKDmfi6h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUMMKDmWvt6Gn.diag
[2025-11-27 17:40:17] -rw-r--r--. 1 boincer umatlas      9348 Nov 27 15:52 runtime_log.err
[2025-11-27 17:40:17] -rw-r--r--. 1 boincer umatlas      6878 Nov 27 17:40 init_data.xml
[2025-11-27 17:40:17] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 17:40 boinc_mmap_file
[2025-11-27 17:40:17] -rw-r--r--. 1 boincer umatlas        29 Nov 27 17:40 wrapper_checkpoint.txt
[2025-11-27 17:40:17] -rw-r--r--. 1 boincer umatlas     21378 Nov 27 17:40 stderr.txt
[2025-11-27 17:40:17] HITS file was successfully produced:
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas 920313773 Nov 27 15:49 shared/HITS.pool.root.1
[2025-11-27 17:40:17]  *** Contents of shared directory: ***
[2025-11-27 17:40:17] total 1307312
[2025-11-27 17:40:17] -rw-r--r--. 2 boincer umatlas 411242338 Nov 27 05:01 ATLAS.root_0
[2025-11-27 17:40:17] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 05:01 input.tar.gz
[2025-11-27 17:40:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:01 start_atlas.sh
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas 920313773 Nov 27 15:49 HITS.pool.root.1
[2025-11-27 17:40:17] -rw-------. 1 boincer umatlas   6512640 Nov 27 15:52 result.tar.gz
17:40:19 (2857126): run_atlas exited; CPU time 247038.903225
17:40:19 (2857126): called boinc_finish(0)

</stderr_txt>
]]>

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