Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:32:05 (1471736): wrapper (7.7.26015): starting
03:32:05 (1471736): wrapper: running run_atlas (--nthreads 3)
[2025-11-30 03:32:05] Arguments: --nthreads 3
[2025-11-30 03:32:05] Threads: 3
[2025-11-30 03:32:05] Checking for CVMFS
[2025-11-30 03:32:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 03:32:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 03:32:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 03:32:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 03:32:05] 2.9.2.0 541886 3841 73528 153464 0 81 35986789 36864001 0 130560 0 1422727 99.981 141363 686 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-30 03:32:05] CVMFS is ok
[2025-11-30 03:32:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 03:32:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 03:32:05] Further information can be found at the LHC@home message board.
[2025-11-30 03:32:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 03:32:05] Checking for apptainer binary...
[2025-11-30 03:32:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 03:32:05] Running /usr/bin/apptainer --version
[2025-11-30 03:32:05] apptainer version 1.4.1-1.1
[2025-11-30 03:32:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 03:32:05] atlasA230
[2025-11-30 03:32:05] apptainer works
[2025-11-30 03:32:05] Set ATHENA_PROC_NUMBER=3
[2025-11-30 03:32:05] Set ATHENA_CORE_NUMBER=3
[2025-11-30 03:32:05] Starting ATLAS job with PandaID=6892521709
[2025-11-30 03:32:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 11:34:53]  *** The last 200 lines of the pilot log: ***
[2025-11-30 11:34:53] 2025-11-30 10:33:59,564 | INFO     | [job] queue monitor thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:33:59,567 | INFO     | [job] retrieve thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:33:59,688 | INFO     | [payload] validate_post thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:33:59,694 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 11:34:53] 2025-11-30 10:33:59,750 | INFO     | [job] control thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:33:59,753 | INFO     | [payload] control thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:34:00,063 | INFO     | [job] job monitor thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:34:00,132 | INFO     | [data] control thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:34:00,620 | INFO     | [payload] failed_post thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:34:00,657 | INFO     | [data] copytool_in thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:34:00,660 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:34:00,676 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:34:00,836 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:34:00,840 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:34:00,910 | INFO     | [job] validate thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:34:01,700 | INFO     | [data] copytool_out thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:34:02,569 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 11:34:53] 2025-11-30 10:34:29,058 | INFO     | PID=1475460 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-30 11:34:53] 2025-11-30 10:34:29,058 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 11:34:53] 2025-11-30 10:34:29,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 11:34:53] 2025-11-30 10:34:29,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 11:34:53] 2025-11-30 10:34:46,225 | INFO     | [monitor] cgroup control has ended
[2025-11-30 11:34:53] 2025-11-30 10:34:48,256 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140074789111616)>', '<ExcThread(monitor, started 140074159163136)>']
[2025-11-30 11:34:53] 2025-11-30 10:34:49,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 11:34:53] 2025-11-30 10:34:49,151 | INFO     | [monitor] control thread has ended
[2025-11-30 11:34:53] 2025-11-30 10:34:53,282 | INFO     | all workflow threads have been joined
[2025-11-30 11:34:53] 2025-11-30 10:34:53,282 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 11:34:53] 2025-11-30 10:34:53,282 | INFO     | traces error code: 0
[2025-11-30 11:34:53] 2025-11-30 10:34:53,282 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 11:34:53] 2025-11-30 10:34:53,334 [wrapper] ==== pilot stdout END ====
[2025-11-30 11:34:53] 2025-11-30 10:34:53,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 11:34:53] 2025-11-30 10:34:53,339 [wrapper] pilotpid: 1475460
[2025-11-30 11:34:53] 2025-11-30 10:34:53,341 [wrapper] Pilot exit status: 0
[2025-11-30 11:34:53] 2025-11-30 10:34:53,348 [wrapper] pandaids: 6892521709
[2025-11-30 11:34:53] 2025-11-30 10:34:53,368 [wrapper] cleanup supervisor_pilot 1584695 1475461
[2025-11-30 11:34:53] 2025-11-30 10:34:53,370 [wrapper] Test setup, not cleaning
[2025-11-30 11:34:53] 2025-11-30 10:34:53,372 [wrapper] apfmon messages muted
[2025-11-30 11:34:53] 2025-11-30 10:34:53,375 [wrapper] ==== wrapper stdout END ====
[2025-11-30 11:34:53] 2025-11-30 10:34:53,377 [wrapper] ==== wrapper stderr END ====
[2025-11-30 11:34:53]  *** Error codes and diagnostics ***
[2025-11-30 11:34:53]     "exeErrorCode": 0,
[2025-11-30 11:34:53]     "exeErrorDiag": "",
[2025-11-30 11:34:53]     "pilotErrorCode": 0,
[2025-11-30 11:34:53]     "pilotErrorDiag": "",
[2025-11-30 11:34:53]  *** Listing of results directory ***
[2025-11-30 11:34:53] total 1312984
[2025-11-30 11:34:53] -rw-r--r-- 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-11-30 11:34:53] -rwx------ 1 boinc boinc     36292 Nov 19 08:02 runpilot2-wrapper.sh
[2025-11-30 11:34:53] -rw-r--r-- 1 boinc boinc      5112 Nov 19 08:02 queuedata.json
[2025-11-30 11:34:53] -rw-r--r-- 1 boinc boinc       100 Nov 30 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 11:34:53] -rwxr-xr-x 1 boinc boinc      7986 Nov 30 03:32 run_atlas
[2025-11-30 11:34:53] -rw-r--r-- 1 boinc boinc       105 Nov 30 03:32 job.xml
[2025-11-30 11:34:53] -rw-r--r-- 2 boinc boinc 409688855 Nov 30 03:32 EVNT.47493027._000004.pool.root.1
[2025-11-30 11:34:53] -rw-r--r-- 2 boinc boinc    590094 Nov 30 03:32 input.tar.gz
[2025-11-30 11:34:53] -rw-r--r-- 2 boinc boinc     15120 Nov 30 03:32 start_atlas.sh
[2025-11-30 11:34:53] drwxrwx--x 2 boinc boinc      4096 Nov 30 03:32 shared
[2025-11-30 11:34:53] -rw-r--r-- 1 boinc boinc         0 Nov 30 03:32 boinc_setup_complete
[2025-11-30 11:34:53] -rw-r--r-- 1 boinc boinc      6443 Nov 30 03:32 init_data.xml
[2025-11-30 11:34:53] -rw-r--r-- 1 boinc boinc         0 Nov 30 03:32 boinc_lockfile
[2025-11-30 11:34:53] -rw-r--r-- 1 boinc boinc      2769 Nov 30 03:32 pandaJob.out
[2025-11-30 11:34:53] -rw------- 1 boinc boinc    991772 Nov 30 03:32 agis_schedconf.cvmfs.json
[2025-11-30 11:34:53] drwx------ 5 boinc boinc      4096 Nov 30 03:32 pilot3
[2025-11-30 11:34:53] -rw-r--r-- 1 boinc boinc       531 Nov 30 11:30 boinc_task_state.xml
[2025-11-30 11:34:53] -rw------- 1 boinc boinc 920440204 Nov 30 11:33 HITS.47493029._000036.pool.root.1
[2025-11-30 11:34:53] -rw------- 1 boinc boinc      1043 Nov 30 11:33 memory_monitor_summary.json
[2025-11-30 11:34:53] -rw------- 1 boinc boinc   1516240 Nov 30 11:33 agis_ddmendpoints.agis.ALL.json
[2025-11-30 11:34:53] -rw------- 1 boinc boinc   1168991 Nov 30 11:33 log.47493029._000036.job.log.tgz.1
[2025-11-30 11:34:53] -rw------- 1 boinc boinc      8565 Nov 30 11:33 heartbeat.json
[2025-11-30 11:34:53] -rw------- 1 boinc boinc        95 Nov 30 11:33 pilot_heartbeat.json
[2025-11-30 11:34:53] -rw-r--r-- 1 boinc boinc        28 Nov 30 11:34 wrapper_checkpoint.txt
[2025-11-30 11:34:53] -rw-r--r-- 1 boinc boinc      8192 Nov 30 11:34 boinc_mmap_file
[2025-11-30 11:34:53] -rw------- 1 boinc boinc      4938 Nov 30 11:34 pilotlog.txt
[2025-11-30 11:34:53] -rw------- 1 boinc boinc   4059565 Nov 30 11:34 log.47493029._000036.job.log.1
[2025-11-30 11:34:53] -rw------- 1 boinc boinc       353 Nov 30 11:34 output.list
[2025-11-30 11:34:53] -rw-r--r-- 1 boinc boinc       620 Nov 30 11:34 runtime_log
[2025-11-30 11:34:53] -rw------- 1 boinc boinc   5253120 Nov 30 11:34 result.tar.gz
[2025-11-30 11:34:53] -rw-r--r-- 1 boinc boinc      8793 Nov 30 11:34 runtime_log.err
[2025-11-30 11:34:53] -rw------- 1 boinc boinc       668 Nov 30 11:34 RPWNDmCOrf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhoFKDmodpY6m.diag
[2025-11-30 11:34:53] -rw-r--r-- 1 boinc boinc      6429 Nov 30 11:34 stderr.txt
[2025-11-30 11:34:53] HITS file was successfully produced:
[2025-11-30 11:34:53] -rw------- 1 boinc boinc 920440204 Nov 30 11:33 shared/HITS.pool.root.1
[2025-11-30 11:34:53]  *** Contents of shared directory: ***
[2025-11-30 11:34:53] total 1304692
[2025-11-30 11:34:53] -rw-r--r-- 2 boinc boinc 409688855 Nov 30 03:32 ATLAS.root_0
[2025-11-30 11:34:53] -rw-r--r-- 2 boinc boinc    590094 Nov 30 03:32 input.tar.gz
[2025-11-30 11:34:53] -rw-r--r-- 2 boinc boinc     15120 Nov 30 03:32 start_atlas.sh
[2025-11-30 11:34:53] -rw------- 1 boinc boinc 920440204 Nov 30 11:33 HITS.pool.root.1
[2025-11-30 11:34:53] -rw------- 1 boinc boinc   5253120 Nov 30 11:34 result.tar.gz
11:35:15 (1471736): run_atlas exited; CPU time 85470.843287
11:35:15 (1471736): called boinc_finish(0)

</stderr_txt>
]]>

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