Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:02:20 (8358): wrapper (7.7.26015): starting
04:02:20 (8358): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 04:02:20] Arguments: --nthreads 12
[2025-11-27 04:02:20] Threads: 12
[2025-11-27 04:02:20] Checking for CVMFS
[2025-11-27 04:02:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 04:02:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 04:02:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 04:02:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 04:02:20] 2.11.2.0 14820 144260 92604 153357 3 81 10438125 20275200 1 130560 0 70102473 99.955 6248909 36459 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 04:02:20] CVMFS is ok
[2025-11-27 04:02:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 04:02:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 04:02:20] Further information can be found at the LHC@home message board.
[2025-11-27 04:02:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 04:02:20] Checking for apptainer binary...
[2025-11-27 04:02:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 04:02:20] Running /usr/bin/apptainer --version
[2025-11-27 04:02:21] apptainer version 1.3.2-1.el7
[2025-11-27 04:02:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 04:02:22] c-205-27.aglt2.org
[2025-11-27 04:02:22] apptainer works
[2025-11-27 04:02:22] Set ATHENA_PROC_NUMBER=12
[2025-11-27 04:02:22] Set ATHENA_CORE_NUMBER=12
[2025-11-27 04:02:22] Starting ATLAS job with PandaID=6896922969
[2025-11-27 04:02:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 11:13:38]  *** The last 200 lines of the pilot log: ***
[2025-11-27 11:13:38] 2025-11-27 16:13:04,576 | INFO     | time since job start (25827s) is within the limit (172800.0s)
[2025-11-27 11:13:38] 2025-11-27 16:13:05,131 | INFO     | monitor loop #1938: job 0:6896922969 is in state 'finished'
[2025-11-27 11:13:38] 2025-11-27 16:13:05,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:13:38] 2025-11-27 16:13:05,329 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 11:13:38] 2025-11-27 16:13:05,332 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-27 11:13:38] 2025-11-27 16:13:05,335 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896922969/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 11:13:38] 2025-11-27 16:13:05,336 | INFO     | extracted standard info from prmon json
[2025-11-27 11:13:38] 2025-11-27 16:13:05,336 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 11:13:38] 2025-11-27 16:13:05,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 11:13:38] 2025-11-27 16:13:05,343 | INFO     | fitting pss+swap vs Time
[2025-11-27 11:13:38] 2025-11-27 16:13:05,344 | INFO     | sum of square deviations: 23468957677.31917
[2025-11-27 11:13:38] 2025-11-27 16:13:05,348 | INFO     | sum of deviations: 386647957190.06384
[2025-11-27 11:13:38] 2025-11-27 16:13:05,348 | INFO     | mean x: 1764247057.1985815
[2025-11-27 11:13:38] 2025-11-27 16:13:05,348 | INFO     | mean y: 3417946.1063829786
[2025-11-27 11:13:38] 2025-11-27 16:13:05,348 | INFO     | intersect: -29062317738.595467
[2025-11-27 11:13:38] 2025-11-27 16:13:05,349 | INFO     | chi2: 5.984980173311199
[2025-11-27 11:13:38] 2025-11-27 16:13:05,349 | INFO     | sum of square deviations: 22646539969.619522
[2025-11-27 11:13:38] 2025-11-27 16:13:05,353 | INFO     | sum of deviations: 533692277597.9037
[2025-11-27 11:13:38] 2025-11-27 16:13:05,353 | INFO     | mean x: 1764246904.7009568
[2025-11-27 11:13:38] 2025-11-27 16:13:05,353 | INFO     | mean y: 3445179.23923445
[2025-11-27 11:13:38] 2025-11-27 16:13:05,353 | INFO     | intersect: -41573102499.9215
[2025-11-27 11:13:38] 2025-11-27 16:13:05,354 | INFO     | chi2: 3.3812026679500846
[2025-11-27 11:13:38] 2025-11-27 16:13:05,354 | INFO     | current chi2=3.3812026679500846 (change=43.50519851297303 %)
[2025-11-27 11:13:38] 2025-11-27 16:13:05,354 | INFO     | sum of square deviations: 21843564486.91521
[2025-11-27 11:13:38] 2025-11-27 16:13:05,358 | INFO     | sum of deviations: 603612822737.5084
[2025-11-27 11:13:38] 2025-11-27 16:13:05,358 | INFO     | mean x: 1764246752.20339
[2025-11-27 11:13:38] 2025-11-27 16:13:05,358 | INFO     | mean y: 3458427.9225181597
[2025-11-27 11:13:38] 2025-11-27 16:13:05,358 | INFO     | intersect: -48748747867.93556
[2025-11-27 11:13:38] 2025-11-27 16:13:05,359 | INFO     | chi2: 2.6177314535863356
[2025-11-27 11:13:38] 2025-11-27 16:13:05,359 | INFO     | current chi2=2.6177314535863356 (change=22.57987140494649 %)
[2025-11-27 11:13:38] 2025-11-27 16:13:05,359 | INFO     | right removable region: 412
[2025-11-27 11:13:38] 2025-11-27 16:13:05,360 | INFO     | sum of square deviations: 22646514288.019337
[2025-11-27 11:13:38] 2025-11-27 16:13:05,363 | INFO     | sum of deviations: 242157515408.8567
[2025-11-27 11:13:38] 2025-11-27 16:13:05,363 | INFO     | mean x: 1764247209.6985645
[2025-11-27 11:13:38] 2025-11-27 16:13:05,364 | INFO     | mean y: 3444663.26076555
[2025-11-27 11:13:38] 2025-11-27 16:13:05,364 | INFO     | intersect: -18861521283.998825
[2025-11-27 11:13:38] 2025-11-27 16:13:05,364 | INFO     | chi2: 3.5482582891560073
[2025-11-27 11:13:38] 2025-11-27 16:13:05,364 | INFO     | current chi2=3.5482582891560073 (change=40.71395081676724 %)
[2025-11-27 11:13:38] 2025-11-27 16:13:05,365 | INFO     | sum of square deviations: 21843513367.719097
[2025-11-27 11:13:38] 2025-11-27 16:13:05,368 | INFO     | sum of deviations: 210985265920.22287
[2025-11-27 11:13:38] 2025-11-27 16:13:05,369 | INFO     | mean x: 1764247362.1985471
[2025-11-27 11:13:38] 2025-11-27 16:13:05,369 | INFO     | mean y: 3450575.704600484
[2025-11-27 11:13:38] 2025-11-27 16:13:05,369 | INFO     | intersect: -17037315376.012833
[2025-11-27 11:13:38] 2025-11-27 16:13:05,369 | INFO     | chi2: 3.500860321911679
[2025-11-27 11:13:38] 2025-11-27 16:13:05,369 | INFO     | current chi2=3.500860321911679 (change=1.3358093853872868 %)
[2025-11-27 11:13:38] 2025-11-27 16:13:05,370 | INFO     | left removable region: 20
[2025-11-27 11:13:38] 2025-11-27 16:13:05,370 | INFO     | sum of square deviations: 18677974851.673588
[2025-11-27 11:13:38] 2025-11-27 16:13:05,373 | INFO     | sum of deviations: 370653469819.31616
[2025-11-27 11:13:38] 2025-11-27 16:13:05,373 | INFO     | mean x: 1764247331.7040815
[2025-11-27 11:13:38] 2025-11-27 16:13:05,374 | INFO     | mean y: 3503618.8647959186
[2025-11-27 11:13:38] 2025-11-27 16:13:05,374 | INFO     | intersect: -35006951224.79801
[2025-11-27 11:13:38] 2025-11-27 16:13:05,374 | INFO     | chi2: 0.06148635361304167
[2025-11-27 11:13:38] 2025-11-27 16:13:05,374 | INFO     | current memory leak: 19.84 B/s (using 392 data points, chi2=0.06)
[2025-11-27 11:13:38] 2025-11-27 16:13:05,375 | INFO     | could have reported an average CPU frequency of 2322 MHz (18 samples)
[2025-11-27 11:13:38] 2025-11-27 16:13:05,375 | INFO     | ..............................
[2025-11-27 11:13:38] 2025-11-27 16:13:05,375 | INFO     | . Timing measurements:
[2025-11-27 11:13:38] 2025-11-27 16:13:05,375 | INFO     | . get job = 0 s
[2025-11-27 11:13:38] 2025-11-27 16:13:05,375 | INFO     | . initial setup = 2 s
[2025-11-27 11:13:38] 2025-11-27 16:13:05,375 | INFO     | . payload setup = 7 s
[2025-11-27 11:13:38] 2025-11-27 16:13:05,375 | INFO     | . stage-in = 0 s
[2025-11-27 11:13:38] 2025-11-27 16:13:05,376 | INFO     | . payload execution = 25785 s
[2025-11-27 11:13:38] 2025-11-27 16:13:05,376 | INFO     | . stage-out = 3 s
[2025-11-27 11:13:38] 2025-11-27 16:13:05,376 | INFO     | . log creation = 0 s
[2025-11-27 11:13:38] 2025-11-27 16:13:05,376 | INFO     | ..............................
[2025-11-27 11:13:38] 2025-11-27 16:13:05,857 | INFO     | 
[2025-11-27 11:13:38] 2025-11-27 16:13:05,857 | INFO     | job summary report
[2025-11-27 11:13:38] 2025-11-27 16:13:05,857 | INFO     | --------------------------------------------------
[2025-11-27 11:13:38] 2025-11-27 16:13:05,857 | INFO     | PanDA job id: 6896922969
[2025-11-27 11:13:38] 2025-11-27 16:13:05,857 | INFO     | task id: 47556161
[2025-11-27 11:13:38] 2025-11-27 16:13:05,857 | INFO     | errors: (none)
[2025-11-27 11:13:38] 2025-11-27 16:13:05,858 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 11:13:38] 2025-11-27 16:13:05,858 | INFO     | pilot state: finished 
[2025-11-27 11:13:38] 2025-11-27 16:13:05,858 | INFO     | transexitcode: 0
[2025-11-27 11:13:38] 2025-11-27 16:13:05,858 | INFO     | exeerrorcode: 0
[2025-11-27 11:13:38] 2025-11-27 16:13:05,858 | INFO     | exeerrordiag: 
[2025-11-27 11:13:38] 2025-11-27 16:13:05,858 | INFO     | exitcode: 0
[2025-11-27 11:13:38] 2025-11-27 16:13:05,859 | INFO     | exitmsg: OK
[2025-11-27 11:13:38] 2025-11-27 16:13:05,859 | INFO     | cpuconsumptiontime: 294699 s
[2025-11-27 11:13:38] 2025-11-27 16:13:05,859 | INFO     | nevents: 1000
[2025-11-27 11:13:38] 2025-11-27 16:13:05,859 | INFO     | neventsw: 0
[2025-11-27 11:13:38] 2025-11-27 16:13:05,859 | INFO     | pid: 18453
[2025-11-27 11:13:38] 2025-11-27 16:13:05,859 | INFO     | pgrp: 18453
[2025-11-27 11:13:38] 2025-11-27 16:13:05,860 | INFO     | corecount: 12
[2025-11-27 11:13:38] 2025-11-27 16:13:05,860 | INFO     | event service: False
[2025-11-27 11:13:38] 2025-11-27 16:13:05,860 | INFO     | sizes: {0: 2284257, 5: 2284519, 11: 2284575, 25796: 2321810, 25797: 2321809, 25801: 2330859, 25804: 2331043, 25812: 2331289}
[2025-11-27 11:13:38] 2025-11-27 16:13:05,860 | INFO     | --------------------------------------------------
[2025-11-27 11:13:38] 2025-11-27 16:13:05,860 | INFO     | 
[2025-11-27 11:13:38] 2025-11-27 16:13:05,860 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 11:13:38] 2025-11-27 16:13:05,974 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,974 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,974 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,975 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,975 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,975 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,976 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,976 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,976 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,977 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,977 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,977 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 11:13:38] 2025-11-27 16:13:05,977 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,977 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 11:13:38] 2025-11-27 16:13:05,977 | INFO     | job 6896922969 has completed (purged errors)
[2025-11-27 11:13:38] 2025-11-27 16:13:05,978 | INFO     | overall cleanup function is called
[2025-11-27 11:13:38] 2025-11-27 16:13:06,994 | INFO     | --- collectZombieJob: --- 10, [18453]
[2025-11-27 11:13:38] 2025-11-27 16:13:06,994 | INFO     | zombie collector waiting for pid 18453
[2025-11-27 11:13:38] 2025-11-27 16:13:06,994 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 11:13:38] 2025-11-27 16:13:06,995 | INFO     | collected zombie processes
[2025-11-27 11:13:38] 2025-11-27 16:13:06,995 | INFO     | will attempt to kill all subprocesses of pid=18453
[2025-11-27 11:13:38] 2025-11-27 16:13:07,086 | INFO     | process IDs to be killed: [18453] (in reverse order)
[2025-11-27 11:13:38] 2025-11-27 16:13:07,140 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 11:13:38] 2025-11-27 16:13:07,141 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 11:13:38] 2025-11-27 16:13:07,144 | INFO     | did not find any defunct processes belonging to 18453
[2025-11-27 11:13:38] 2025-11-27 16:13:07,148 | INFO     | did not find any defunct processes belonging to 18453
[2025-11-27 11:13:38] 2025-11-27 16:13:07,150 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 11:13:38] 2025-11-27 16:13:07,150 | INFO     | ready for new job
[2025-11-27 11:13:38] 2025-11-27 16:13:07,150 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 11:13:38] 2025-11-27 16:13:07,152 | INFO     | ***************************************
[2025-11-27 11:13:38] 2025-11-27 16:13:07,152 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 11:13:38] 2025-11-27 16:13:07,152 | INFO     | ***************************************
[2025-11-27 11:13:38] 2025-11-27 16:13:07,152 | INFO     | 
[2025-11-27 11:13:38] 2025-11-27 16:13:07,153 | INFO     | architecture information:
[2025-11-27 11:13:38] 2025-11-27 16:13:07,154 | INFO     | executing command: cat /etc/os-release
[2025-11-27 11:13:38] 2025-11-27 16:13:07,170 | INFO     | cat /etc/os-release:
[2025-11-27 11:13:38] NAME="CentOS Linux"
[2025-11-27 11:13:38] VERSION="7 (Core)"
[2025-11-27 11:13:38] ID="centos"
[2025-11-27 11:13:38] ID_LIKE="rhel fedora"
[2025-11-27 11:13:38] VERSION_ID="7"
[2025-11-27 11:13:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 11:13:38] ANSI_COLOR="0;31"
[2025-11-27 11:13:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 11:13:38] HOME_URL="https://www.centos.org/"
[2025-11-27 11:13:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 11:13:38] 
[2025-11-27 11:13:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 11:13:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 11:13:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 11:13:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 11:13:38] 
[2025-11-27 11:13:38] 2025-11-27 16:13:07,170 | INFO     | ***************************************
[2025-11-27 11:13:38] 2025-11-27 16:13:07,673 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 11:13:38] 2025-11-27 16:13:07,690 | INFO     | sufficient remaining disk space (28257026048 B)
[2025-11-27 11:13:38] 2025-11-27 16:13:07,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 11:13:38] 2025-11-27 16:13:07,691 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 11:13:38] 2025-11-27 16:13:07,691 | INFO     | update_server=False
[2025-11-27 11:13:38] 2025-11-27 16:13:07,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 11:13:38] 2025-11-27 16:13:08,035 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 11:13:38] 2025-11-27 16:13:08,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 11:13:38] 2025-11-27 16:13:08,379 | INFO     | all data control threads have been joined
[2025-11-27 11:13:38] 2025-11-27 16:13:08,602 | INFO     | all job control threads have been joined
[2025-11-27 11:13:38] 2025-11-27 16:13:08,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:13:38] 2025-11-27 16:13:08,639 | INFO     | aborting loop
[2025-11-27 11:13:38] 2025-11-27 16:13:08,695 | INFO     | [job] retrieve thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:08,884 | INFO     | [job] validate thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:08,920 | INFO     | all payload control threads have been joined
[2025-11-27 11:13:38] 2025-11-27 16:13:09,240 | INFO     | [payload] failed_post thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:09,287 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:09,372 | INFO     | [payload] validate_post thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:09,385 | INFO     | [data] control thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:09,520 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:09,540 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:09,607 | INFO     | [job] control thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:09,645 | INFO     | [job] job monitor thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:09,926 | INFO     | [payload] control thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:09,951 | INFO     | [data] copytool_in thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:10,078 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:10,167 | INFO     | [data] copytool_out thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:10,471 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:13:38] 2025-11-27 16:13:11,476 | INFO     | [job] queue monitor thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:12,041 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 11:13:38] 2025-11-27 16:13:19,393 | INFO     | [monitor] cgroup control has ended
[2025-11-27 11:13:38] 2025-11-27 16:13:19,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140478988392256)>', '<ExcThread(monitor, started 140478104200960)>']
[2025-11-27 11:13:38] 2025-11-27 16:13:24,561 | INFO     | all workflow threads have been joined
[2025-11-27 11:13:38] 2025-11-27 16:13:24,561 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 11:13:38] 2025-11-27 16:13:24,568 | INFO     | traces error code: 0
[2025-11-27 11:13:38] 2025-11-27 16:13:24,569 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 11:13:38] 2025-11-27 16:13:37,773 | INFO     | PID=12033 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 11:13:38] 2025-11-27 16:13:37,773 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 11:13:38] 2025-11-27 16:13:37,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 11:13:38] 2025-11-27 16:13:37,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 11:13:38] 2025-11-27 16:13:37,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 11:13:38] 2025-11-27 16:13:37,774 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 11:13:38] 2025-11-27 16:13:37,774 | INFO     | [monitor] control thread has ended
[2025-11-27 11:13:38] 2025-11-27 16:13:37,861 [wrapper] ==== pilot stdout END ====
[2025-11-27 11:13:38] 2025-11-27 16:13:37,866 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 11:13:38] 2025-11-27 16:13:37,869 [wrapper] pilotpid: 12033
[2025-11-27 11:13:38] 2025-11-27 16:13:37,873 [wrapper] Pilot exit status: 0
[2025-11-27 11:13:38] 2025-11-27 16:13:37,888 [wrapper] pandaids: 6896922969
[2025-11-27 11:13:38] 2025-11-27 16:13:37,928 [wrapper] cleanup supervisor_pilot  3172 12034
[2025-11-27 11:13:38] 2025-11-27 16:13:37,931 [wrapper] Test setup, not cleaning
[2025-11-27 11:13:38] 2025-11-27 16:13:37,935 [wrapper] apfmon messages muted
[2025-11-27 11:13:38] 2025-11-27 16:13:37,939 [wrapper] ==== wrapper stdout END ====
[2025-11-27 11:13:38] 2025-11-27 16:13:37,942 [wrapper] ==== wrapper stderr END ====
[2025-11-27 11:13:38]  *** Error codes and diagnostics ***
[2025-11-27 11:13:38]     "exeErrorCode": 0,
[2025-11-27 11:13:38]     "exeErrorDiag": "",
[2025-11-27 11:13:38]     "pilotErrorCode": 0,
[2025-11-27 11:13:38]     "pilotErrorDiag": "",
[2025-11-27 11:13:38]  *** Listing of results directory ***
[2025-11-27 11:13:38] total 1303808
[2025-11-27 11:13:38] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 05:51 pilot3.tar.gz
[2025-11-27 11:13:38] -rwx------ 1 boincer umatlas     36292 Nov 25 06:21 runpilot2-wrapper.sh
[2025-11-27 11:13:38] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 06:21 queuedata.json
[2025-11-27 11:13:38] -rw-r--r-- 1 boincer umatlas       100 Nov 27 04:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 11:13:38] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 04:02 run_atlas
[2025-11-27 11:13:38] -rw-r--r-- 1 boincer umatlas       105 Nov 27 04:02 job.xml
[2025-11-27 11:13:38] -rw-r--r-- 2 boincer umatlas 409140751 Nov 27 04:02 EVNT.47483658._002147.pool.root.1
[2025-11-27 11:13:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 04:02 start_atlas.sh
[2025-11-27 11:13:38] drwxrwx--x 2 boincer umatlas      4096 Nov 27 04:02 shared
[2025-11-27 11:13:38] -rw-r--r-- 2 boincer umatlas    590099 Nov 27 04:02 input.tar.gz
[2025-11-27 11:13:38] -rw-r--r-- 1 boincer umatlas         0 Nov 27 04:02 boinc_lockfile
[2025-11-27 11:13:38] -rw-r--r-- 1 boincer umatlas      2781 Nov 27 04:02 pandaJob.out
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas        57 Nov 27 04:02 setup.sh.local
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas    991573 Nov 27 04:02 agis_schedconf.cvmfs.json
[2025-11-27 11:13:38] drwx------ 5 boincer umatlas      4096 Nov 27 04:02 pilot3
[2025-11-27 11:13:38] -rw-r--r-- 1 boincer umatlas       533 Nov 27 11:02 boinc_task_state.xml
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas 910407856 Nov 27 11:12 HITS.47556161._001301.pool.root.1
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas      1062 Nov 27 11:12 memory_monitor_summary.json
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas        95 Nov 27 11:12 pilot_heartbeat.json
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas   1516240 Nov 27 11:12 agis_ddmendpoints.agis.ALL.json
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas   2188660 Nov 27 11:12 log.47556161._001301.job.log.tgz.1
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas      8674 Nov 27 11:13 heartbeat.json
[2025-11-27 11:13:38] -rw-r--r-- 1 boincer umatlas      5956 Nov 27 11:13 init_data.xml
[2025-11-27 11:13:38] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 11:13 boinc_mmap_file
[2025-11-27 11:13:38] -rw-r--r-- 1 boincer umatlas        29 Nov 27 11:13 wrapper_checkpoint.txt
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas       815 Nov 27 11:13 pilotlog.txt
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas   3625988 Nov 27 11:13 log.47556161._001301.job.log.1
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas       353 Nov 27 11:13 output.list
[2025-11-27 11:13:38] -rw-r--r-- 1 boincer umatlas       620 Nov 27 11:13 runtime_log
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas   5836800 Nov 27 11:13 result.tar.gz
[2025-11-27 11:13:38] -rw-r--r-- 1 boincer umatlas      9345 Nov 27 11:13 runtime_log.err
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas       670 Nov 27 11:13 NSNODmRI6h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmILMKDmdHxmlm.diag
[2025-11-27 11:13:38] -rw-r--r-- 1 boincer umatlas     21297 Nov 27 11:13 stderr.txt
[2025-11-27 11:13:38] HITS file was successfully produced:
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas 910407856 Nov 27 11:12 shared/HITS.pool.root.1
[2025-11-27 11:13:38]  *** Contents of shared directory: ***
[2025-11-27 11:13:38] total 1294928
[2025-11-27 11:13:38] -rw-r--r-- 2 boincer umatlas 409140751 Nov 27 04:02 ATLAS.root_0
[2025-11-27 11:13:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 04:02 start_atlas.sh
[2025-11-27 11:13:38] -rw-r--r-- 2 boincer umatlas    590099 Nov 27 04:02 input.tar.gz
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas 910407856 Nov 27 11:12 HITS.pool.root.1
[2025-11-27 11:13:38] -rw------- 1 boincer umatlas   5836800 Nov 27 11:13 result.tar.gz
11:13:39 (8358): run_atlas exited; CPU time 287934.639698
11:13:39 (8358): called boinc_finish(0)

</stderr_txt>
]]>

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