Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:06:14 (3817707): wrapper (7.7.26015): starting
00:06:14 (3817707): wrapper: running run_atlas (--nthreads 3)
[2025-12-03 00:06:14] Arguments: --nthreads 3
[2025-12-03 00:06:14] Threads: 3
[2025-12-03 00:06:14] Checking for CVMFS
[2025-12-03 00:06:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 00:06:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 00:06:15] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 00:06:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 00:06:15] 2.9.2.0 2224968 20456 92308 153571 1 81 10694614 36864000 0 130560 0 7602302 99.956 907869 1513 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-03 00:06:15] CVMFS is ok
[2025-12-03 00:06:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 00:06:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 00:06:15] Further information can be found at the LHC@home message board.
[2025-12-03 00:06:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 00:06:15] Checking for apptainer binary...
[2025-12-03 00:06:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 00:06:15] Running /usr/bin/apptainer --version
[2025-12-03 00:06:15] apptainer version 1.4.1-1.1
[2025-12-03 00:06:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 00:06:15] cosA127a
[2025-12-03 00:06:15] apptainer works
[2025-12-03 00:06:15] Set ATHENA_PROC_NUMBER=3
[2025-12-03 00:06:15] Set ATHENA_CORE_NUMBER=3
[2025-12-03 00:06:15] Starting ATLAS job with PandaID=6892528376
[2025-12-03 00:06:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 08:02:02]  *** The last 200 lines of the pilot log: ***
[2025-12-03 08:02:02] 2025-12-03 07:01:04,362 | INFO     | time since job start (28484s) is within the limit (172800.0s)
[2025-12-03 08:02:02] 2025-12-03 07:01:04,531 | INFO     | monitor loop #2165: job 0:6892528376 is in state 'finished'
[2025-12-03 08:02:02] 2025-12-03 07:01:04,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 08:02:02] 2025-12-03 07:01:05,937 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 08:02:02] 2025-12-03 07:01:05,939 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3858.4121666666665
[2025-12-03 08:02:02] 2025-12-03 07:01:05,940 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6892528376/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 08:02:02] 2025-12-03 07:01:05,941 | INFO     | extracted standard info from prmon json
[2025-12-03 08:02:02] 2025-12-03 07:01:05,941 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 08:02:02] 2025-12-03 07:01:05,941 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 08:02:02] 2025-12-03 07:01:05,945 | INFO     | fitting pss+swap vs Time
[2025-12-03 08:02:02] 2025-12-03 07:01:05,945 | INFO     | sum of square deviations: 31581087018.0
[2025-12-03 08:02:02] 2025-12-03 07:01:05,947 | INFO     | sum of deviations: 256924480408.00018
[2025-12-03 08:02:02] 2025-12-03 07:01:05,947 | INFO     | mean x: 1764731013.0
[2025-12-03 08:02:02] 2025-12-03 07:01:05,947 | INFO     | mean y: 2191396.965738758
[2025-12-03 08:02:02] 2025-12-03 07:01:05,947 | INFO     | intersect: -14354584806.351355
[2025-12-03 08:02:02] 2025-12-03 07:01:05,947 | INFO     | chi2: 3.365101331972208
[2025-12-03 08:02:02] 2025-12-03 07:01:05,947 | INFO     | sum of square deviations: 30577524015.5
[2025-12-03 08:02:02] 2025-12-03 07:01:05,949 | INFO     | sum of deviations: 304340889113.5
[2025-12-03 08:02:02] 2025-12-03 07:01:05,949 | INFO     | mean x: 1764730860.5
[2025-12-03 08:02:02] 2025-12-03 07:01:05,949 | INFO     | mean y: 2198566.7813852816
[2025-12-03 08:02:02] 2025-12-03 07:01:05,949 | INFO     | intersect: -17562328857.294933
[2025-12-03 08:02:02] 2025-12-03 07:01:05,949 | INFO     | chi2: 2.461391763433274
[2025-12-03 08:02:02] 2025-12-03 07:01:05,949 | INFO     | current chi2=2.461391763433274 (change=26.855344888211462 %)
[2025-12-03 08:02:02] 2025-12-03 07:01:05,950 | INFO     | sum of square deviations: 29595449788.0
[2025-12-03 08:02:02] 2025-12-03 07:01:05,951 | INFO     | sum of deviations: 298823607565.0001
[2025-12-03 08:02:02] 2025-12-03 07:01:05,951 | INFO     | mean x: 1764730708.0
[2025-12-03 08:02:02] 2025-12-03 07:01:05,951 | INFO     | mean y: 2197709.969365427
[2025-12-03 08:02:02] 2025-12-03 07:01:05,951 | INFO     | intersect: -17816189924.710796
[2025-12-03 08:02:02] 2025-12-03 07:01:05,951 | INFO     | chi2: 2.4598524360140104
[2025-12-03 08:02:02] 2025-12-03 07:01:05,951 | INFO     | current chi2=2.4598524360140104 (change=0.06253890348265019 %)
[2025-12-03 08:02:02] 2025-12-03 07:01:05,952 | INFO     | right removable region: 456
[2025-12-03 08:02:02] 2025-12-03 07:01:05,952 | INFO     | sum of square deviations: 30577524015.5
[2025-12-03 08:02:02] 2025-12-03 07:01:05,953 | INFO     | sum of deviations: 156351326317.0
[2025-12-03 08:02:02] 2025-12-03 07:01:05,953 | INFO     | mean x: 1764731165.5
[2025-12-03 08:02:02] 2025-12-03 07:01:05,953 | INFO     | mean y: 2206657.9783549784
[2025-12-03 08:02:02] 2025-12-03 07:01:05,953 | INFO     | intersect: -9021351239.61352
[2025-12-03 08:02:02] 2025-12-03 07:01:05,954 | INFO     | chi2: 1.1705206479899206
[2025-12-03 08:02:02] 2025-12-03 07:01:05,954 | INFO     | current chi2=1.1705206479899206 (change=65.21588705609928 %)
[2025-12-03 08:02:02] 2025-12-03 07:01:05,954 | INFO     | sum of square deviations: 29595449788.0
[2025-12-03 08:02:02] 2025-12-03 07:01:05,956 | INFO     | sum of deviations: 131352922722.0
[2025-12-03 08:02:02] 2025-12-03 07:01:05,956 | INFO     | mean x: 1764731318.0
[2025-12-03 08:02:02] 2025-12-03 07:01:05,956 | INFO     | mean y: 2210525.8336980306
[2025-12-03 08:02:02] 2025-12-03 07:01:05,956 | INFO     | intersect: -7830162967.348883
[2025-12-03 08:02:02] 2025-12-03 07:01:05,956 | INFO     | chi2: 0.9918431534050008
[2025-12-03 08:02:02] 2025-12-03 07:01:05,956 | INFO     | current chi2=0.9918431534050008 (change=15.264787929350424 %)
[2025-12-03 08:02:02] 2025-12-03 07:01:05,956 | INFO     | left removable region: 20
[2025-12-03 08:02:02] 2025-12-03 07:01:05,956 | INFO     | sum of square deviations: 25700146985.0
[2025-12-03 08:02:02] 2025-12-03 07:01:05,958 | INFO     | sum of deviations: 150835806082.50003
[2025-12-03 08:02:02] 2025-12-03 07:01:05,958 | INFO     | mean x: 1764731287.5
[2025-12-03 08:02:02] 2025-12-03 07:01:05,958 | INFO     | mean y: 2221211.961009174
[2025-12-03 08:02:02] 2025-12-03 07:01:05,958 | INFO     | intersect: -10355099562.290998
[2025-12-03 08:02:02] 2025-12-03 07:01:05,958 | INFO     | chi2: 0.06519096046513358
[2025-12-03 08:02:02] 2025-12-03 07:01:05,958 | INFO     | current memory leak: 5.87 B/s (using 436 data points, chi2=0.07)
[2025-12-03 08:02:02] 2025-12-03 07:01:05,959 | INFO     | could have reported an average CPU frequency of 4178 MHz (19 samples)
[2025-12-03 08:02:02] 2025-12-03 07:01:05,959 | INFO     | ..............................
[2025-12-03 08:02:02] 2025-12-03 07:01:05,959 | INFO     | . Timing measurements:
[2025-12-03 08:02:02] 2025-12-03 07:01:05,959 | INFO     | . get job = 0 s
[2025-12-03 08:02:02] 2025-12-03 07:01:05,959 | INFO     | . initial setup = 1 s
[2025-12-03 08:02:02] 2025-12-03 07:01:05,959 | INFO     | . payload setup = 2 s
[2025-12-03 08:02:02] 2025-12-03 07:01:05,959 | INFO     | . stage-in = 0 s
[2025-12-03 08:02:02] 2025-12-03 07:01:05,959 | INFO     | . payload execution = 28461 s
[2025-12-03 08:02:02] 2025-12-03 07:01:05,959 | INFO     | . stage-out = 1 s
[2025-12-03 08:02:02] 2025-12-03 07:01:05,959 | INFO     | . log creation = 0 s
[2025-12-03 08:02:02] 2025-12-03 07:01:05,959 | INFO     | ..............................
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | 
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | job summary report
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | --------------------------------------------------
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | PanDA job id: 6892528376
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | task id: 47493029
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | errors: (none)
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | pilot state: finished 
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | transexitcode: 0
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | exeerrorcode: 0
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | exeerrordiag: 
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | exitcode: 0
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | exitmsg: OK
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | cpuconsumptiontime: 84009 s
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | nevents: 1000
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | neventsw: 0
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | pid: 3827871
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | pgrp: 3827871
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | corecount: 3
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | event service: False
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | sizes: {0: 2284301, 2: 2284563, 10: 2284591, 28467: 2322060, 28468: 2331060, 28469: 2331116, 28472: 2331490}
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | --------------------------------------------------
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | 
[2025-12-03 08:02:02] 2025-12-03 07:01:05,989 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-03 08:02:02] 2025-12-03 07:01:06,002 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,002 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,002 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,002 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,002 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,002 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,002 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,002 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,003 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,003 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,003 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,003 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,003 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,003 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,003 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,003 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,003 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,003 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 08:02:02] 2025-12-03 07:01:06,003 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,003 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 08:02:02] 2025-12-03 07:01:06,003 | INFO     | job 6892528376 has completed (purged errors)
[2025-12-03 08:02:02] 2025-12-03 07:01:06,003 | INFO     | overall cleanup function is called
[2025-12-03 08:02:02] 2025-12-03 07:01:07,011 | INFO     | --- collectZombieJob: --- 10, [3827871]
[2025-12-03 08:02:02] 2025-12-03 07:01:07,011 | INFO     | zombie collector waiting for pid 3827871
[2025-12-03 08:02:02] 2025-12-03 07:01:07,011 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 08:02:02] 2025-12-03 07:01:07,011 | INFO     | collected zombie processes
[2025-12-03 08:02:02] 2025-12-03 07:01:07,011 | INFO     | will attempt to kill all subprocesses of pid=3827871
[2025-12-03 08:02:02] 2025-12-03 07:01:07,062 | INFO     | process IDs to be killed: [3827871] (in reverse order)
[2025-12-03 08:02:02] 2025-12-03 07:01:07,088 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 08:02:02] 2025-12-03 07:01:07,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 08:02:02] 2025-12-03 07:01:07,090 | INFO     | did not find any defunct processes belonging to 3827871
[2025-12-03 08:02:02] 2025-12-03 07:01:07,091 | INFO     | did not find any defunct processes belonging to 3827871
[2025-12-03 08:02:02] 2025-12-03 07:01:07,092 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 08:02:02] 2025-12-03 07:01:07,092 | INFO     | ready for new job
[2025-12-03 08:02:02] 2025-12-03 07:01:07,092 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 08:02:02] 2025-12-03 07:01:07,093 | INFO     | ***************************************
[2025-12-03 08:02:02] 2025-12-03 07:01:07,093 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 08:02:02] 2025-12-03 07:01:07,093 | INFO     | ***************************************
[2025-12-03 08:02:02] 2025-12-03 07:01:07,093 | INFO     | 
[2025-12-03 08:02:02] 2025-12-03 07:01:07,094 | INFO     | architecture information:
[2025-12-03 08:02:02] 2025-12-03 07:01:07,094 | INFO     | executing command: cat /etc/os-release
[2025-12-03 08:02:02] 2025-12-03 07:01:07,103 | INFO     | cat /etc/os-release:
[2025-12-03 08:02:02] NAME="CentOS Linux"
[2025-12-03 08:02:02] VERSION="7 (Core)"
[2025-12-03 08:02:02] ID="centos"
[2025-12-03 08:02:02] ID_LIKE="rhel fedora"
[2025-12-03 08:02:02] VERSION_ID="7"
[2025-12-03 08:02:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 08:02:02] ANSI_COLOR="0;31"
[2025-12-03 08:02:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 08:02:02] HOME_URL="https://www.centos.org/"
[2025-12-03 08:02:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 08:02:02] 
[2025-12-03 08:02:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 08:02:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 08:02:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 08:02:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 08:02:02] 
[2025-12-03 08:02:02] 2025-12-03 07:01:07,103 | INFO     | ***************************************
[2025-12-03 08:02:02] 2025-12-03 07:01:07,605 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-03 08:02:02] 2025-12-03 07:01:07,615 | INFO     | sufficient remaining disk space (343478894592 B)
[2025-12-03 08:02:02] 2025-12-03 07:01:07,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 08:02:02] 2025-12-03 07:01:07,616 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 08:02:02] 2025-12-03 07:01:07,616 | INFO     | update_server=False
[2025-12-03 08:02:02] 2025-12-03 07:01:07,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 08:02:02] 2025-12-03 07:01:07,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 08:02:02] 2025-12-03 07:01:08,039 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 08:02:02] 2025-12-03 07:01:08,039 | INFO     | aborting loop
[2025-12-03 08:02:02] 2025-12-03 07:01:08,063 | INFO     | all data control threads have been joined
[2025-12-03 08:02:02] 2025-12-03 07:01:08,296 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 08:02:02] 2025-12-03 07:01:08,620 | INFO     | [job] retrieve thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:08,621 | INFO     | [job] queue monitor thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:08,646 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:08,818 | INFO     | all payload control threads have been joined
[2025-12-03 08:02:02] 2025-12-03 07:01:08,928 | INFO     | all job control threads have been joined
[2025-12-03 08:02:02] 2025-12-03 07:01:08,981 | INFO     | [data] copytool_in thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:09,045 | INFO     | [job] job monitor thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:09,068 | INFO     | [data] control thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:09,070 | INFO     | [payload] validate_post thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:09,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 08:02:02] 2025-12-03 07:01:09,485 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:09,495 | INFO     | [job] validate thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:09,623 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:09,823 | INFO     | [payload] control thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:09,933 | INFO     | [job] control thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:10,176 | INFO     | [payload] failed_post thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:10,301 | INFO     | [data] copytool_out thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:13,222 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:18,093 | INFO     | job.realtimelogging is not enabled
[2025-12-03 08:02:02] 2025-12-03 07:01:19,098 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 08:02:02] 2025-12-03 07:01:37,501 | INFO     | PID=3821434 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 08:02:02] 2025-12-03 07:01:37,502 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 08:02:02] 2025-12-03 07:01:37,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 08:02:02] 2025-12-03 07:01:37,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 08:02:02] 2025-12-03 07:01:57,391 | INFO     | [monitor] cgroup control has ended
[2025-12-03 08:02:02] 2025-12-03 07:01:57,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140191405668160)>', '<ExcThread(monitor, started 140190374930176)>']
[2025-12-03 08:02:02] 2025-12-03 07:01:58,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 08:02:02] 2025-12-03 07:01:58,606 | INFO     | [monitor] control thread has ended
[2025-12-03 08:02:02] 2025-12-03 07:02:02,716 | INFO     | all workflow threads have been joined
[2025-12-03 08:02:02] 2025-12-03 07:02:02,717 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 08:02:02] 2025-12-03 07:02:02,717 | INFO     | traces error code: 0
[2025-12-03 08:02:02] 2025-12-03 07:02:02,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 08:02:02] 2025-12-03 07:02:02,769 [wrapper] ==== pilot stdout END ====
[2025-12-03 08:02:02] 2025-12-03 07:02:02,771 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 08:02:02] 2025-12-03 07:02:02,774 [wrapper] pilotpid: 3821434
[2025-12-03 08:02:02] 2025-12-03 07:02:02,776 [wrapper] Pilot exit status: 0
[2025-12-03 08:02:02] 2025-12-03 07:02:02,783 [wrapper] pandaids: 6892528376
[2025-12-03 08:02:02] 2025-12-03 07:02:02,801 [wrapper] cleanup supervisor_pilot 3929017 3821435
[2025-12-03 08:02:02] 2025-12-03 07:02:02,804 [wrapper] Test setup, not cleaning
[2025-12-03 08:02:02] 2025-12-03 07:02:02,806 [wrapper] apfmon messages muted
[2025-12-03 08:02:02] 2025-12-03 07:02:02,808 [wrapper] ==== wrapper stdout END ====
[2025-12-03 08:02:02] 2025-12-03 07:02:02,811 [wrapper] ==== wrapper stderr END ====
[2025-12-03 08:02:02]  *** Error codes and diagnostics ***
[2025-12-03 08:02:02]     "exeErrorCode": 0,
[2025-12-03 08:02:02]     "exeErrorDiag": "",
[2025-12-03 08:02:02]     "pilotErrorCode": 0,
[2025-12-03 08:02:02]     "pilotErrorDiag": "",
[2025-12-03 08:02:02]  *** Listing of results directory ***
[2025-12-03 08:02:02] total 1308052
[2025-12-03 08:02:02] -rw-r--r-- 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-12-03 08:02:02] -rwx------ 1 boinc boinc     36292 Nov 19 08:10 runpilot2-wrapper.sh
[2025-12-03 08:02:02] -rw-r--r-- 1 boinc boinc      5112 Nov 19 08:10 queuedata.json
[2025-12-03 08:02:02] -rw-r--r-- 1 boinc boinc       100 Dec  3 00:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 08:02:02] -rwxr-xr-x 1 boinc boinc      7986 Dec  3 00:06 run_atlas
[2025-12-03 08:02:02] -rw-r--r-- 1 boinc boinc       105 Dec  3 00:06 job.xml
[2025-12-03 08:02:02] -rw-r--r-- 2 boinc boinc 408668728 Dec  3 00:06 EVNT.47493027._000163.pool.root.1
[2025-12-03 08:02:02] -rw-r--r-- 2 boinc boinc    590095 Dec  3 00:06 input.tar.gz
[2025-12-03 08:02:02] -rw-r--r-- 2 boinc boinc     15120 Dec  3 00:06 start_atlas.sh
[2025-12-03 08:02:02] drwxrwx--x 2 boinc boinc      4096 Dec  3 00:06 shared
[2025-12-03 08:02:02] -rw-r--r-- 1 boinc boinc         0 Dec  3 00:06 boinc_setup_complete
[2025-12-03 08:02:02] -rw-r--r-- 1 boinc boinc      6442 Dec  3 00:06 init_data.xml
[2025-12-03 08:02:02] -rw-r--r-- 1 boinc boinc         0 Dec  3 00:06 boinc_lockfile
[2025-12-03 08:02:02] -rw-r--r-- 1 boinc boinc      2770 Dec  3 00:06 pandaJob.out
[2025-12-03 08:02:02] -rw------- 1 boinc boinc    989292 Dec  3 00:06 agis_schedconf.cvmfs.json
[2025-12-03 08:02:02] drwx------ 5 boinc boinc      4096 Dec  3 00:06 pilot3
[2025-12-03 08:02:02] -rw-r--r-- 1 boinc boinc       531 Dec  3 07:56 boinc_task_state.xml
[2025-12-03 08:02:02] -rw------- 1 boinc boinc 916543861 Dec  3 08:00 HITS.47493029._001581.pool.root.1
[2025-12-03 08:02:02] -rw------- 1 boinc boinc      1037 Dec  3 08:00 memory_monitor_summary.json
[2025-12-03 08:02:02] -rw------- 1 boinc boinc        95 Dec  3 08:00 pilot_heartbeat.json
[2025-12-03 08:02:02] -rw------- 1 boinc boinc   1516240 Dec  3 08:01 agis_ddmendpoints.agis.ALL.json
[2025-12-03 08:02:02] -rw------- 1 boinc boinc   1156117 Dec  3 08:01 log.47493029._001581.job.log.tgz.1
[2025-12-03 08:02:02] -rw------- 1 boinc boinc      7897 Dec  3 08:01 heartbeat.json
[2025-12-03 08:02:02] -rw-r--r-- 1 boinc boinc      8192 Dec  3 08:01 boinc_mmap_file
[2025-12-03 08:02:02] -rw-r--r-- 1 boinc boinc        28 Dec  3 08:01 wrapper_checkpoint.txt
[2025-12-03 08:02:02] -rw------- 1 boinc boinc      4824 Dec  3 08:02 pilotlog.txt
[2025-12-03 08:02:02] -rw------- 1 boinc boinc   4006251 Dec  3 08:02 log.47493029._001581.job.log.1
[2025-12-03 08:02:02] -rw------- 1 boinc boinc       353 Dec  3 08:02 output.list
[2025-12-03 08:02:02] -rw-r--r-- 1 boinc boinc       620 Dec  3 08:02 runtime_log
[2025-12-03 08:02:02] -rw------- 1 boinc boinc   5181440 Dec  3 08:02 result.tar.gz
[2025-12-03 08:02:02] -rw-r--r-- 1 boinc boinc      8788 Dec  3 08:02 runtime_log.err
[2025-12-03 08:02:02] -rw------- 1 boinc boinc       667 Dec  3 08:02 IIQLDmSVrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgiGKDmTEiJIn.diag
[2025-12-03 08:02:02] -rw-r--r-- 1 boinc boinc     21238 Dec  3 08:02 stderr.txt
[2025-12-03 08:02:02] HITS file was successfully produced:
[2025-12-03 08:02:02] -rw------- 1 boinc boinc 916543861 Dec  3 08:00 shared/HITS.pool.root.1
[2025-12-03 08:02:02]  *** Contents of shared directory: ***
[2025-12-03 08:02:02] total 1299816
[2025-12-03 08:02:02] -rw-r--r-- 2 boinc boinc 408668728 Dec  3 00:06 ATLAS.root_0
[2025-12-03 08:02:02] -rw-r--r-- 2 boinc boinc    590095 Dec  3 00:06 input.tar.gz
[2025-12-03 08:02:02] -rw-r--r-- 2 boinc boinc     15120 Dec  3 00:06 start_atlas.sh
[2025-12-03 08:02:02] -rw------- 1 boinc boinc 916543861 Dec  3 08:00 HITS.pool.root.1
[2025-12-03 08:02:02] -rw------- 1 boinc boinc   5181440 Dec  3 08:02 result.tar.gz
08:02:04 (3817707): run_atlas exited; CPU time 84052.610971
08:02:04 (3817707): called boinc_finish(0)

</stderr_txt>
]]>

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