Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:21:42 (3672038): wrapper (7.7.26015): starting
03:21:42 (3672038): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 03:21:42] Arguments: --nthreads 9
[2025-11-27 03:21:42] Threads: 9
[2025-11-27 03:21:42] Checking for CVMFS
[2025-11-27 03:21:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 03:21:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 03:21:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 03:21:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 03:21:43] 2.13.3.0 10978 31197 349440 153355 2 126 29864218 40960000 13497 16776704 0 71101798 99.585 94316103 38848 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 03:21:43] CVMFS is ok
[2025-11-27 03:21:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 03:21:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 03:21:43] Further information can be found at the LHC@home message board.
[2025-11-27 03:21:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 03:21:43] Checking for apptainer binary...
[2025-11-27 03:21:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 03:21:43] Running /usr/bin/apptainer --version
[2025-11-27 03:21:43] apptainer version 1.4.4-1.el9
[2025-11-27 03:21:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 03:21:43] c6-8-12-1.aglt2.org
[2025-11-27 03:21:43] apptainer works
[2025-11-27 03:21:44] Set ATHENA_PROC_NUMBER=9
[2025-11-27 03:21:44] Set ATHENA_CORE_NUMBER=9
[2025-11-27 03:21:44] Starting ATLAS job with PandaID=6891584306
[2025-11-27 03:21:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:06:35]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:06:35] 2025-11-28 00:05:45,450 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:06:35] 2025-11-28 00:05:45,452 | INFO     | sum of square deviations: 246199729019.08087
[2025-11-27 19:06:35] 2025-11-28 00:05:45,507 | INFO     | sum of deviations: 2893784811374.219
[2025-11-27 19:06:35] 2025-11-28 00:05:45,508 | INFO     | mean x: 1764260094.2321813
[2025-11-27 19:06:35] 2025-11-28 00:05:45,508 | INFO     | mean y: 3111044.831533477
[2025-11-27 19:06:35] 2025-11-28 00:05:45,508 | INFO     | intersect: -20733666710.139343
[2025-11-27 19:06:35] 2025-11-28 00:05:45,509 | INFO     | chi2: 11.071733658645366
[2025-11-27 19:06:35] 2025-11-28 00:05:45,510 | INFO     | sum of square deviations: 242233663464.0544
[2025-11-27 19:06:35] 2025-11-28 00:05:45,541 | INFO     | sum of deviations: 3236537772451.7573
[2025-11-27 19:06:35] 2025-11-28 00:05:45,547 | INFO     | mean x: 1764259941.747014
[2025-11-27 19:06:35] 2025-11-28 00:05:45,547 | INFO     | mean y: 3124221.548317047
[2025-11-27 19:06:35] 2025-11-28 00:05:45,547 | INFO     | intersect: -23569544664.47991
[2025-11-27 19:06:35] 2025-11-28 00:05:45,548 | INFO     | chi2: 7.806042527580659
[2025-11-27 19:06:35] 2025-11-28 00:05:45,549 | INFO     | current chi2=7.806042527580659 (change=29.49575226201988 %)
[2025-11-27 19:06:35] 2025-11-28 00:05:45,550 | INFO     | sum of square deviations: 238310435921.11533
[2025-11-27 19:06:35] 2025-11-28 00:05:45,578 | INFO     | sum of deviations: 3341065932235.908
[2025-11-27 19:06:35] 2025-11-28 00:05:45,579 | INFO     | mean x: 1764259789.2620087
[2025-11-27 19:06:35] 2025-11-28 00:05:45,579 | INFO     | mean y: 3128282.462882096
[2025-11-27 19:06:35] 2025-11-28 00:05:45,579 | INFO     | intersect: -24731450607.184143
[2025-11-27 19:06:35] 2025-11-28 00:05:45,580 | INFO     | chi2: 7.303199322570503
[2025-11-27 19:06:35] 2025-11-28 00:05:45,580 | INFO     | current chi2=7.303199322570503 (change=6.44171746737848 %)
[2025-11-27 19:06:35] 2025-11-28 00:05:45,580 | INFO     | right removable region: 915
[2025-11-27 19:06:35] 2025-11-28 00:05:45,581 | INFO     | sum of square deviations: 242232120164.05432
[2025-11-27 19:06:35] 2025-11-28 00:05:45,644 | INFO     | sum of deviations: 2501134909358.4673
[2025-11-27 19:06:35] 2025-11-28 00:05:45,644 | INFO     | mean x: 1764260246.747014
[2025-11-27 19:06:35] 2025-11-28 00:05:45,644 | INFO     | mean y: 3126134.5342019545
[2025-11-27 19:06:35] 2025-11-28 00:05:45,644 | INFO     | intersect: -18213503804.31876
[2025-11-27 19:06:35] 2025-11-28 00:05:45,676 | INFO     | chi2: 7.085423224009081
[2025-11-27 19:06:35] 2025-11-28 00:05:45,676 | INFO     | current chi2=7.085423224009081 (change=36.00439242433883 %)
[2025-11-27 19:06:35] 2025-11-28 00:05:45,678 | INFO     | sum of square deviations: 238307349321.11533
[2025-11-27 19:06:35] 2025-11-28 00:05:45,851 | INFO     | sum of deviations: 2183023200743.4531
[2025-11-27 19:06:35] 2025-11-28 00:05:45,852 | INFO     | mean x: 1764260399.2620087
[2025-11-27 19:06:35] 2025-11-28 00:05:45,852 | INFO     | mean y: 3138489.731441048
[2025-11-27 19:06:35] 2025-11-28 00:05:45,852 | INFO     | intersect: -16158433508.420174
[2025-11-27 19:06:35] 2025-11-28 00:05:45,857 | INFO     | chi2: 4.581236534757838
[2025-11-27 19:06:35] 2025-11-28 00:05:45,857 | INFO     | current chi2=4.581236534757838 (change=35.342796189869965 %)
[2025-11-27 19:06:35] 2025-11-28 00:05:45,859 | INFO     | sum of square deviations: 234426187221.3873
[2025-11-27 19:06:35] 2025-11-28 00:05:45,937 | INFO     | sum of deviations: 2068977155039.3513
[2025-11-27 19:06:35] 2025-11-28 00:05:45,962 | INFO     | mean x: 1764260551.7574093
[2025-11-27 19:06:35] 2025-11-28 00:05:45,962 | INFO     | mean y: 3142965.72557629
[2025-11-27 19:06:35] 2025-11-28 00:05:45,962 | INFO     | intersect: -15567706095.07501
[2025-11-27 19:06:35] 2025-11-28 00:05:45,963 | INFO     | chi2: 4.315280474320324
[2025-11-27 19:06:35] 2025-11-28 00:05:45,963 | INFO     | current chi2=4.315280474320324 (change=5.805333525560301 %)
[2025-11-27 19:06:35] 2025-11-28 00:05:45,963 | INFO     | left removable region: 30
[2025-11-27 19:06:35] 2025-11-28 00:05:45,965 | INFO     | sum of square deviations: 214925558404.728
[2025-11-27 19:06:35] 2025-11-28 00:05:46,019 | INFO     | sum of deviations: 2263431521881.822
[2025-11-27 19:06:35] 2025-11-28 00:05:46,020 | INFO     | mean x: 1764260673.7242937
[2025-11-27 19:06:35] 2025-11-28 00:05:46,020 | INFO     | mean y: 3171340.24519774
[2025-11-27 19:06:35] 2025-11-28 00:05:46,020 | INFO     | intersect: -18576672077.93145
[2025-11-27 19:06:35] 2025-11-28 00:05:46,021 | INFO     | chi2: 0.2759529767582289
[2025-11-27 19:06:35] 2025-11-28 00:05:46,021 | INFO     | current memory leak: 10.53 B/s (using 885 data points, chi2=0.28)
[2025-11-27 19:06:35] 2025-11-28 00:05:46,035 | INFO     | could have reported an average CPU frequency of 2755 MHz (34 samples)
[2025-11-27 19:06:35] 2025-11-28 00:05:46,035 | INFO     | ..............................
[2025-11-27 19:06:35] 2025-11-28 00:05:46,036 | INFO     | . Timing measurements:
[2025-11-27 19:06:35] 2025-11-28 00:05:46,036 | INFO     | . get job = 0 s
[2025-11-27 19:06:35] 2025-11-28 00:05:46,036 | INFO     | . initial setup = 5 s
[2025-11-27 19:06:35] 2025-11-28 00:05:46,036 | INFO     | . payload setup = 40 s
[2025-11-27 19:06:35] 2025-11-28 00:05:46,036 | INFO     | . stage-in = 0 s
[2025-11-27 19:06:35] 2025-11-28 00:05:46,036 | INFO     | . payload execution = 56461 s
[2025-11-27 19:06:35] 2025-11-28 00:05:46,036 | INFO     | . stage-out = 8 s
[2025-11-27 19:06:35] 2025-11-28 00:05:46,036 | INFO     | . log creation = 2 s
[2025-11-27 19:06:35] 2025-11-28 00:05:46,036 | INFO     | ..............................
[2025-11-27 19:06:35] 2025-11-28 00:05:46,602 | INFO     | 
[2025-11-27 19:06:35] 2025-11-28 00:05:46,606 | INFO     | job summary report
[2025-11-27 19:06:35] 2025-11-28 00:05:46,606 | INFO     | --------------------------------------------------
[2025-11-27 19:06:35] 2025-11-28 00:05:46,606 | INFO     | PanDA job id: 6891584306
[2025-11-27 19:06:35] 2025-11-28 00:05:46,606 | INFO     | task id: 47493068
[2025-11-27 19:06:35] 2025-11-28 00:05:46,606 | INFO     | errors: (none)
[2025-11-27 19:06:35] 2025-11-28 00:05:46,606 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:06:35] 2025-11-28 00:05:46,606 | INFO     | pilot state: finished 
[2025-11-27 19:06:35] 2025-11-28 00:05:46,606 | INFO     | transexitcode: 0
[2025-11-27 19:06:35] 2025-11-28 00:05:46,606 | INFO     | exeerrorcode: 0
[2025-11-27 19:06:35] 2025-11-28 00:05:46,607 | INFO     | exeerrordiag: 
[2025-11-27 19:06:35] 2025-11-28 00:05:46,607 | INFO     | exitcode: 0
[2025-11-27 19:06:35] 2025-11-28 00:05:46,607 | INFO     | exitmsg: OK
[2025-11-27 19:06:35] 2025-11-28 00:05:46,607 | INFO     | cpuconsumptiontime: 243159 s
[2025-11-27 19:06:35] 2025-11-28 00:05:46,607 | INFO     | nevents: 1000
[2025-11-27 19:06:35] 2025-11-28 00:05:46,607 | INFO     | neventsw: 0
[2025-11-27 19:06:35] 2025-11-28 00:05:46,607 | INFO     | pid: 3684836
[2025-11-27 19:06:35] 2025-11-28 00:05:46,607 | INFO     | pgrp: 3684836
[2025-11-27 19:06:35] 2025-11-28 00:05:46,607 | INFO     | corecount: 9
[2025-11-27 19:06:35] 2025-11-28 00:05:46,607 | INFO     | event service: False
[2025-11-27 19:06:35] 2025-11-28 00:05:46,607 | INFO     | sizes: {0: 2284133, 1: 2284332, 2: 2284360, 12: 2284360, 23: 2284678, 34: 2284678, 56506: 2334613, 56515: 2343607, 56518: 2343663, 56533: 2343909}
[2025-11-27 19:06:35] 2025-11-28 00:05:46,607 | INFO     | --------------------------------------------------
[2025-11-27 19:06:35] 2025-11-28 00:05:46,608 | INFO     | 
[2025-11-27 19:06:35] 2025-11-28 00:05:46,608 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 19:06:35] 2025-11-28 00:05:46,709 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,710 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,710 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,710 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,711 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,711 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,711 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,712 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:06:35] 2025-11-28 00:05:46,712 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,712 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:06:35] 2025-11-28 00:05:46,712 | INFO     | job 6891584306 has completed (purged errors)
[2025-11-27 19:06:35] 2025-11-28 00:05:46,741 | INFO     | overall cleanup function is called
[2025-11-27 19:06:35] 2025-11-28 00:05:47,831 | INFO     | --- collectZombieJob: --- 10, [3684836]
[2025-11-27 19:06:35] 2025-11-28 00:05:47,831 | INFO     | zombie collector waiting for pid 3684836
[2025-11-27 19:06:35] 2025-11-28 00:05:47,831 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:06:35] 2025-11-28 00:05:47,831 | INFO     | collected zombie processes
[2025-11-27 19:06:35] 2025-11-28 00:05:47,831 | INFO     | will attempt to kill all subprocesses of pid=3684836
[2025-11-27 19:06:35] 2025-11-28 00:05:48,789 | INFO     | PID=3675829 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:06:35] 2025-11-28 00:05:48,789 | INFO     | .. there are 18 such processes running
[2025-11-27 19:06:35] 2025-11-28 00:05:49,023 | INFO     | process IDs to be killed: [3684836] (in reverse order)
[2025-11-27 19:06:35] 2025-11-28 00:05:49,254 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:06:35] 2025-11-28 00:05:49,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:06:35] 2025-11-28 00:05:49,280 | INFO     | did not find any defunct processes belonging to 3684836
[2025-11-27 19:06:35] 2025-11-28 00:05:49,299 | INFO     | did not find any defunct processes belonging to 3684836
[2025-11-27 19:06:35] 2025-11-28 00:05:49,300 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:06:35] 2025-11-28 00:05:49,300 | INFO     | ready for new job
[2025-11-27 19:06:35] 2025-11-28 00:05:49,300 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:06:35] 2025-11-28 00:05:49,305 | INFO     | ***************************************
[2025-11-27 19:06:35] 2025-11-28 00:05:49,305 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:06:35] 2025-11-28 00:05:49,305 | INFO     | ***************************************
[2025-11-27 19:06:35] 2025-11-28 00:05:49,305 | INFO     | 
[2025-11-27 19:06:35] 2025-11-28 00:05:49,308 | INFO     | architecture information:
[2025-11-27 19:06:35] 2025-11-28 00:05:49,321 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:06:35] 2025-11-28 00:05:49,439 | INFO     | cat /etc/os-release:
[2025-11-27 19:06:35] NAME="CentOS Linux"
[2025-11-27 19:06:35] VERSION="7 (Core)"
[2025-11-27 19:06:35] ID="centos"
[2025-11-27 19:06:35] ID_LIKE="rhel fedora"
[2025-11-27 19:06:35] VERSION_ID="7"
[2025-11-27 19:06:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:06:35] ANSI_COLOR="0;31"
[2025-11-27 19:06:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:06:35] HOME_URL="https://www.centos.org/"
[2025-11-27 19:06:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:06:35] 
[2025-11-27 19:06:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:06:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:06:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:06:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:06:35] 
[2025-11-27 19:06:35] 2025-11-28 00:05:49,439 | INFO     | ***************************************
[2025-11-27 19:06:35] 2025-11-28 00:05:49,947 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 19:06:35] 2025-11-28 00:05:50,013 | INFO     | sufficient remaining disk space (54594109440 B)
[2025-11-27 19:06:35] 2025-11-28 00:05:50,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:06:35] 2025-11-28 00:05:50,014 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:06:35] 2025-11-28 00:05:50,014 | INFO     | update_server=False
[2025-11-27 19:06:35] 2025-11-28 00:05:50,014 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:06:35] 2025-11-28 00:05:50,015 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:06:35] 2025-11-28 00:05:50,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:06:35] 2025-11-28 00:05:50,015 | INFO     | aborting loop
[2025-11-27 19:06:35] 2025-11-28 00:05:50,461 | INFO     | all data control threads have been joined
[2025-11-27 19:06:35] 2025-11-28 00:05:50,823 | INFO     | all job control threads have been joined
[2025-11-27 19:06:35] 2025-11-28 00:05:50,863 | INFO     | all payload control threads have been joined
[2025-11-27 19:06:35] 2025-11-28 00:05:51,038 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:51,039 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:51,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:51,052 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:51,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:06:35] 2025-11-28 00:05:51,467 | INFO     | [data] control thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:51,539 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:51,618 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:51,655 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:06:35] 2025-11-28 00:05:51,829 | INFO     | [job] control thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:51,871 | INFO     | [payload] control thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:51,871 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:51,997 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:52,039 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:52,145 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:52,188 | INFO     | [job] validate thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:52,661 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:05:55,169 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:06:35] 2025-11-28 00:06:21,266 | INFO     | PID=3675829 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:06:35] 2025-11-28 00:06:21,266 | INFO     | .. there are 18 such processes running
[2025-11-27 19:06:35] 2025-11-28 00:06:21,267 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:06:35] 2025-11-28 00:06:21,267 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:06:35] 2025-11-28 00:06:21,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:06:35] 2025-11-28 00:06:27,311 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:06:35] 2025-11-28 00:06:29,320 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140070042990400)>', '<ExcThread(monitor, started 140069411219200)>']
[2025-11-27 19:06:35] 2025-11-28 00:06:30,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:06:35] 2025-11-28 00:06:30,321 | INFO     | [monitor] control thread has ended
[2025-11-27 19:06:35] 2025-11-28 00:06:34,346 | INFO     | all workflow threads have been joined
[2025-11-27 19:06:35] 2025-11-28 00:06:34,346 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:06:35] 2025-11-28 00:06:34,346 | INFO     | traces error code: 0
[2025-11-27 19:06:35] 2025-11-28 00:06:34,346 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:06:35] 2025-11-28 00:06:34,710 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:06:35] 2025-11-28 00:06:34,729 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:06:35] 2025-11-28 00:06:34,753 [wrapper] pilotpid: 3675829
[2025-11-27 19:06:35] 2025-11-28 00:06:34,793 [wrapper] Pilot exit status: 0
[2025-11-27 19:06:35] 2025-11-28 00:06:34,849 [wrapper] pandaids: 6891584306
[2025-11-27 19:06:35] 2025-11-28 00:06:35,014 [wrapper] cleanup supervisor_pilot 1670494 3675830
[2025-11-27 19:06:35] 2025-11-28 00:06:35,018 [wrapper] Test setup, not cleaning
[2025-11-27 19:06:35] 2025-11-28 00:06:35,021 [wrapper] apfmon messages muted
[2025-11-27 19:06:35] 2025-11-28 00:06:35,025 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:06:35] 2025-11-28 00:06:35,028 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:06:35]  *** Error codes and diagnostics ***
[2025-11-27 19:06:35]     "exeErrorCode": 0,
[2025-11-27 19:06:35]     "exeErrorDiag": "",
[2025-11-27 19:06:35]     "pilotErrorCode": 0,
[2025-11-27 19:06:35]     "pilotErrorDiag": "",
[2025-11-27 19:06:35]  *** Listing of results directory ***
[2025-11-27 19:06:35] total 1313896
[2025-11-27 19:06:35] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 11:45 pilot3.tar.gz
[2025-11-27 19:06:35] -rwx------. 1 boincer umatlas     36292 Nov 18 12:13 runpilot2-wrapper.sh
[2025-11-27 19:06:35] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 12:13 queuedata.json
[2025-11-27 19:06:35] -rw-r--r--. 1 boincer umatlas       100 Nov 27 03:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:06:35] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 03:21 run_atlas
[2025-11-27 19:06:35] -rw-r--r--. 1 boincer umatlas       105 Nov 27 03:21 job.xml
[2025-11-27 19:06:35] -rw-r--r--. 2 boincer umatlas 408918434 Nov 27 03:21 EVNT.47493065._000455.pool.root.1
[2025-11-27 19:06:35] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 03:21 start_atlas.sh
[2025-11-27 19:06:35] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 03:21 shared
[2025-11-27 19:06:35] -rw-r--r--. 2 boincer umatlas    590093 Nov 27 03:21 input.tar.gz
[2025-11-27 19:06:35] -rw-r--r--. 1 boincer umatlas         0 Nov 27 03:21 boinc_lockfile
[2025-11-27 19:06:35] -rw-r--r--. 1 boincer umatlas      2773 Nov 27 03:21 pandaJob.out
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas    991570 Nov 27 03:22 agis_schedconf.cvmfs.json
[2025-11-27 19:06:35] drwx------. 5 boincer umatlas      4096 Nov 27 03:22 pilot3
[2025-11-27 19:06:35] -rw-r--r--. 1 boincer umatlas       533 Nov 27 18:54 boinc_task_state.xml
[2025-11-27 19:06:35] -rw-r--r--. 1 boincer umatlas      6845 Nov 27 19:00 init_data.xml
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas 915097971 Nov 27 19:04 HITS.47493068._004549.pool.root.1
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas      1062 Nov 27 19:05 memory_monitor_summary.json
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas   1516240 Nov 27 19:05 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas   2153026 Nov 27 19:05 log.47493068._004549.job.log.tgz.1
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas      8629 Nov 27 19:05 heartbeat.json
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas        95 Nov 27 19:06 pilot_heartbeat.json
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas      4824 Nov 27 19:06 pilotlog.txt
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas   6597110 Nov 27 19:06 log.47493068._004549.job.log.1
[2025-11-27 19:06:35] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:06 boinc_mmap_file
[2025-11-27 19:06:35] -rw-r--r--. 1 boincer umatlas        29 Nov 27 19:06 wrapper_checkpoint.txt
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas       353 Nov 27 19:06 output.list
[2025-11-27 19:06:35] -rw-r--r--. 1 boincer umatlas       620 Nov 27 19:06 runtime_log
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas   8765440 Nov 27 19:06 result.tar.gz
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas       662 Nov 27 19:06 VEiMDmASef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGYFKDmLwEOxm.diag
[2025-11-27 19:06:35] -rw-r--r--. 1 boincer umatlas      8709 Nov 27 19:06 runtime_log.err
[2025-11-27 19:06:35] -rw-r--r--. 1 boincer umatlas     21264 Nov 27 19:06 stderr.txt
[2025-11-27 19:06:35] HITS file was successfully produced:
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas 915097971 Nov 27 19:04 shared/HITS.pool.root.1
[2025-11-27 19:06:35]  *** Contents of shared directory: ***
[2025-11-27 19:06:35] total 1302152
[2025-11-27 19:06:35] -rw-r--r--. 2 boincer umatlas 408918434 Nov 27 03:21 ATLAS.root_0
[2025-11-27 19:06:35] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 03:21 start_atlas.sh
[2025-11-27 19:06:35] -rw-r--r--. 2 boincer umatlas    590093 Nov 27 03:21 input.tar.gz
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas 915097971 Nov 27 19:04 HITS.pool.root.1
[2025-11-27 19:06:35] -rw-------. 1 boincer umatlas   8765440 Nov 27 19:06 result.tar.gz
19:06:37 (3672038): run_atlas exited; CPU time 244189.094061
19:06:37 (3672038): called boinc_finish(0)

</stderr_txt>
]]>

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