Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:36:39 (1356533): wrapper (7.7.26015): starting
03:36:39 (1356533): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 03:36:39] Arguments: --nthreads 8
[2025-11-27 03:36:39] Threads: 8
[2025-11-27 03:36:39] Checking for CVMFS
[2025-11-27 03:36:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 03:36:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 03:36:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 03:36:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 03:36:39] 2.13.3.0 11314 31259 229204 153356 1 376 25763859 32935937 64994 16776704 0 253294107 99.661 240045091 33607 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 03:36:39] CVMFS is ok
[2025-11-27 03:36:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 03:36:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 03:36:39] Further information can be found at the LHC@home message board.
[2025-11-27 03:36:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 03:36:39] Checking for apptainer binary...
[2025-11-27 03:36:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 03:36:39] Running /usr/bin/apptainer --version
[2025-11-27 03:36:39] apptainer version 1.4.4-1.el9
[2025-11-27 03:36:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 03:36:39] c7-2-10.aglt2.org
[2025-11-27 03:36:39] apptainer works
[2025-11-27 03:36:40] Set ATHENA_PROC_NUMBER=8
[2025-11-27 03:36:40] Set ATHENA_CORE_NUMBER=8
[2025-11-27 03:36:40] Starting ATLAS job with PandaID=6896715502
[2025-11-27 03:36:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 14:52:16]  *** The last 200 lines of the pilot log: ***
[2025-11-27 14:52:16] 2025-11-27 19:51:22,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 14:52:16] 2025-11-27 19:51:22,472 | INFO     | fitting pss+swap vs Time
[2025-11-27 14:52:16] 2025-11-27 19:51:22,473 | INFO     | sum of square deviations: 90371990619.97589
[2025-11-27 14:52:16] 2025-11-27 19:51:22,482 | INFO     | sum of deviations: 645323285046.6832
[2025-11-27 14:52:16] 2025-11-27 19:51:22,482 | INFO     | mean x: 1764252853.6214178
[2025-11-27 14:52:16] 2025-11-27 19:51:22,482 | INFO     | mean y: 2866309.6561085973
[2025-11-27 14:52:16] 2025-11-27 19:51:22,486 | INFO     | intersect: -12595212357.655006
[2025-11-27 14:52:16] 2025-11-27 19:51:22,491 | INFO     | chi2: 9.411449039365014
[2025-11-27 14:52:16] 2025-11-27 19:51:22,491 | INFO     | sum of square deviations: 88342952650.53046
[2025-11-27 14:52:16] 2025-11-27 19:51:22,504 | INFO     | sum of deviations: 885968510580.3729
[2025-11-27 14:52:16] 2025-11-27 19:51:22,505 | INFO     | mean x: 1764252701.1261399
[2025-11-27 14:52:16] 2025-11-27 19:51:22,505 | INFO     | mean y: 2884397.670212766
[2025-11-27 14:52:16] 2025-11-27 19:51:22,505 | INFO     | intersect: -17690347388.314705
[2025-11-27 14:52:16] 2025-11-27 19:51:22,510 | INFO     | chi2: 5.651678196627955
[2025-11-27 14:52:16] 2025-11-27 19:51:22,510 | INFO     | current chi2=5.651678196627955 (change=39.94890507307819 %)
[2025-11-27 14:52:16] 2025-11-27 19:51:22,511 | INFO     | sum of square deviations: 86344400100.8274
[2025-11-27 14:52:16] 2025-11-27 19:51:22,528 | INFO     | sum of deviations: 1064450899157.4489
[2025-11-27 14:52:16] 2025-11-27 19:51:22,529 | INFO     | mean x: 1764252548.62634
[2025-11-27 14:52:16] 2025-11-27 19:51:22,529 | INFO     | mean y: 2897992.485451761
[2025-11-27 14:52:16] 2025-11-27 19:51:22,529 | INFO     | intersect: -21746748881.349655
[2025-11-27 14:52:16] 2025-11-27 19:51:22,529 | INFO     | chi2: 3.112680768080937
[2025-11-27 14:52:16] 2025-11-27 19:51:22,529 | INFO     | current chi2=3.112680768080937 (change=44.92466379387803 %)
[2025-11-27 14:52:16] 2025-11-27 19:51:22,530 | INFO     | sum of square deviations: 84376020797.85022
[2025-11-27 14:52:16] 2025-11-27 19:51:22,539 | INFO     | sum of deviations: 1060406943603.21
[2025-11-27 14:52:16] 2025-11-27 19:51:22,539 | INFO     | mean x: 1764252396.118827
[2025-11-27 14:52:16] 2025-11-27 19:51:22,539 | INFO     | mean y: 2897674.8024691357
[2025-11-27 14:52:16] 2025-11-27 19:51:22,540 | INFO     | intersect: -22169580636.247147
[2025-11-27 14:52:16] 2025-11-27 19:51:22,540 | INFO     | chi2: 3.0835103432405324
[2025-11-27 14:52:16] 2025-11-27 19:51:22,540 | INFO     | current chi2=3.0835103432405324 (change=0.9371479767386885 %)
[2025-11-27 14:52:16] 2025-11-27 19:51:22,540 | INFO     | right removable region: 647
[2025-11-27 14:52:16] 2025-11-27 19:51:22,541 | INFO     | sum of square deviations: 88342701330.53046
[2025-11-27 14:52:16] 2025-11-27 19:51:22,549 | INFO     | sum of deviations: 431131791623.9143
[2025-11-27 14:52:16] 2025-11-27 19:51:22,550 | INFO     | mean x: 1764253006.1261399
[2025-11-27 14:52:16] 2025-11-27 19:51:22,550 | INFO     | mean y: 2882392.4468085105
[2025-11-27 14:52:16] 2025-11-27 19:51:22,550 | INFO     | intersect: -8607059888.616018
[2025-11-27 14:52:16] 2025-11-27 19:51:22,551 | INFO     | chi2: 6.672653399158845
[2025-11-27 14:52:16] 2025-11-27 19:51:22,551 | INFO     | current chi2=6.672653399158845 (change=29.100679701400733 %)
[2025-11-27 14:52:16] 2025-11-27 19:51:22,551 | INFO     | sum of square deviations: 86344097298.57285
[2025-11-27 14:52:16] 2025-11-27 19:51:22,559 | INFO     | sum of deviations: 379411209040.23694
[2025-11-27 14:52:16] 2025-11-27 19:51:22,560 | INFO     | mean x: 1764253158.6278713
[2025-11-27 14:52:16] 2025-11-27 19:51:22,560 | INFO     | mean y: 2886338.2067381316
[2025-11-27 14:52:16] 2025-11-27 19:51:22,560 | INFO     | intersect: -7749553549.529762
[2025-11-27 14:52:16] 2025-11-27 19:51:22,560 | INFO     | chi2: 6.58315129701577
[2025-11-27 14:52:16] 2025-11-27 19:51:22,561 | INFO     | current chi2=6.58315129701577 (change=1.3413270072495824 %)
[2025-11-27 14:52:16] 2025-11-27 19:51:22,561 | INFO     | left removable region: 20
[2025-11-27 14:52:16] 2025-11-27 19:51:22,561 | INFO     | sum of square deviations: 76435909615.17055
[2025-11-27 14:52:16] 2025-11-27 19:51:22,569 | INFO     | sum of deviations: 714011161352.0399
[2025-11-27 14:52:16] 2025-11-27 19:51:22,569 | INFO     | mean x: 1764252975.6236045
[2025-11-27 14:52:16] 2025-11-27 19:51:22,569 | INFO     | mean y: 2924830.902711324
[2025-11-27 14:52:16] 2025-11-27 19:51:22,569 | INFO     | intersect: -16477500696.653057
[2025-11-27 14:52:16] 2025-11-27 19:51:22,570 | INFO     | chi2: 0.12107612277722446
[2025-11-27 14:52:16] 2025-11-27 19:51:22,570 | INFO     | current memory leak: 9.34 B/s (using 627 data points, chi2=0.12)
[2025-11-27 14:52:16] 2025-11-27 19:51:22,571 | INFO     | could have reported an average CPU frequency of 3408 MHz (26 samples)
[2025-11-27 14:52:16] 2025-11-27 19:51:22,571 | INFO     | ..............................
[2025-11-27 14:52:16] 2025-11-27 19:51:22,571 | INFO     | . Timing measurements:
[2025-11-27 14:52:16] 2025-11-27 19:51:22,571 | INFO     | . get job = 0 s
[2025-11-27 14:52:16] 2025-11-27 19:51:22,571 | INFO     | . initial setup = 2 s
[2025-11-27 14:52:16] 2025-11-27 19:51:22,571 | INFO     | . payload setup = 13 s
[2025-11-27 14:52:16] 2025-11-27 19:51:22,571 | INFO     | . stage-in = 0 s
[2025-11-27 14:52:16] 2025-11-27 19:51:22,571 | INFO     | . payload execution = 40404 s
[2025-11-27 14:52:16] 2025-11-27 19:51:22,571 | INFO     | . stage-out = 4 s
[2025-11-27 14:52:16] 2025-11-27 19:51:22,572 | INFO     | . log creation = 0 s
[2025-11-27 14:52:16] 2025-11-27 19:51:22,572 | INFO     | ..............................
[2025-11-27 14:52:16] 2025-11-27 19:51:23,046 | INFO     | 
[2025-11-27 14:52:16] 2025-11-27 19:51:23,070 | INFO     | job summary report
[2025-11-27 14:52:16] 2025-11-27 19:51:23,070 | INFO     | --------------------------------------------------
[2025-11-27 14:52:16] 2025-11-27 19:51:23,070 | INFO     | PanDA job id: 6896715502
[2025-11-27 14:52:16] 2025-11-27 19:51:23,070 | INFO     | task id: 47556161
[2025-11-27 14:52:16] 2025-11-27 19:51:23,070 | INFO     | errors: (none)
[2025-11-27 14:52:16] 2025-11-27 19:51:23,070 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 14:52:16] 2025-11-27 19:51:23,070 | INFO     | pilot state: finished 
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | transexitcode: 0
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | exeerrorcode: 0
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | exeerrordiag: 
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | exitcode: 0
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | exitmsg: OK
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | cpuconsumptiontime: 183670 s
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | nevents: 1000
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | neventsw: 0
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | pid: 1384288
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | pgrp: 1384288
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | corecount: 8
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | event service: False
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | sizes: {0: 2284213, 9: 2284475, 11: 2284503, 40422: 2328838, 40427: 2337832, 40428: 2337888, 40444: 2338262}
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | --------------------------------------------------
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | 
[2025-11-27 14:52:16] 2025-11-27 19:51:23,071 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-27 14:52:16] 2025-11-27 19:51:23,102 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,102 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,103 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,103 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,103 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,103 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,103 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,103 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,103 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,103 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,103 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,103 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,103 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,103 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,103 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,103 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,104 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,104 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 14:52:16] 2025-11-27 19:51:23,104 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,104 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 14:52:16] 2025-11-27 19:51:23,104 | INFO     | job 6896715502 has completed (purged errors)
[2025-11-27 14:52:16] 2025-11-27 19:51:23,104 | INFO     | overall cleanup function is called
[2025-11-27 14:52:16] 2025-11-27 19:51:24,124 | INFO     | --- collectZombieJob: --- 10, [1384288]
[2025-11-27 14:52:16] 2025-11-27 19:51:24,125 | INFO     | zombie collector waiting for pid 1384288
[2025-11-27 14:52:16] 2025-11-27 19:51:24,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 14:52:16] 2025-11-27 19:51:24,125 | INFO     | collected zombie processes
[2025-11-27 14:52:16] 2025-11-27 19:51:24,125 | INFO     | will attempt to kill all subprocesses of pid=1384288
[2025-11-27 14:52:16] 2025-11-27 19:51:25,997 | INFO     | process IDs to be killed: [1384288] (in reverse order)
[2025-11-27 14:52:16] 2025-11-27 19:51:26,274 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 14:52:16] 2025-11-27 19:51:26,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 14:52:16] 2025-11-27 19:51:26,375 | INFO     | did not find any defunct processes belonging to 1384288
[2025-11-27 14:52:16] 2025-11-27 19:51:26,409 | INFO     | did not find any defunct processes belonging to 1384288
[2025-11-27 14:52:16] 2025-11-27 19:51:26,410 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 14:52:16] 2025-11-27 19:51:26,411 | INFO     | ready for new job
[2025-11-27 14:52:16] 2025-11-27 19:51:26,411 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 14:52:16] 2025-11-27 19:51:26,414 | INFO     | ***************************************
[2025-11-27 14:52:16] 2025-11-27 19:51:26,414 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 14:52:16] 2025-11-27 19:51:26,414 | INFO     | ***************************************
[2025-11-27 14:52:16] 2025-11-27 19:51:26,414 | INFO     | 
[2025-11-27 14:52:16] 2025-11-27 19:51:26,419 | INFO     | architecture information:
[2025-11-27 14:52:16] 2025-11-27 19:51:26,419 | INFO     | executing command: cat /etc/os-release
[2025-11-27 14:52:16] 2025-11-27 19:51:26,439 | INFO     | cat /etc/os-release:
[2025-11-27 14:52:16] NAME="CentOS Linux"
[2025-11-27 14:52:16] VERSION="7 (Core)"
[2025-11-27 14:52:16] ID="centos"
[2025-11-27 14:52:16] ID_LIKE="rhel fedora"
[2025-11-27 14:52:16] VERSION_ID="7"
[2025-11-27 14:52:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 14:52:16] ANSI_COLOR="0;31"
[2025-11-27 14:52:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 14:52:16] HOME_URL="https://www.centos.org/"
[2025-11-27 14:52:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 14:52:16] 
[2025-11-27 14:52:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 14:52:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 14:52:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 14:52:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 14:52:16] 
[2025-11-27 14:52:16] 2025-11-27 19:51:26,440 | INFO     | ***************************************
[2025-11-27 14:52:16] 2025-11-27 19:51:26,949 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-27 14:52:16] 2025-11-27 19:51:26,993 | INFO     | sufficient remaining disk space (65701675008 B)
[2025-11-27 14:52:16] 2025-11-27 19:51:26,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 14:52:16] 2025-11-27 19:51:26,993 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 14:52:16] 2025-11-27 19:51:26,993 | INFO     | update_server=False
[2025-11-27 14:52:16] 2025-11-27 19:51:26,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 14:52:16] 2025-11-27 19:51:26,993 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 14:52:16] 2025-11-27 19:51:26,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 14:52:16] 2025-11-27 19:51:26,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:52:16] 2025-11-27 19:51:26,995 | INFO     | aborting loop
[2025-11-27 14:52:16] 2025-11-27 19:51:27,024 | INFO     | all job control threads have been joined
[2025-11-27 14:52:16] 2025-11-27 19:51:27,210 | INFO     | all data control threads have been joined
[2025-11-27 14:52:16] 2025-11-27 19:51:27,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:52:16] 2025-11-27 19:51:27,866 | INFO     | all payload control threads have been joined
[2025-11-27 14:52:16] 2025-11-27 19:51:28,000 | INFO     | [job] job monitor thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:28,005 | INFO     | [job] retrieve thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:28,030 | INFO     | [job] control thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:28,179 | INFO     | [payload] validate_post thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:28,215 | INFO     | [data] control thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:28,610 | INFO     | [payload] failed_post thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:28,685 | INFO     | [job] queue monitor thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:28,872 | INFO     | [payload] control thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:28,879 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:29,000 | INFO     | [data] copytool_out thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:29,180 | INFO     | [job] validate thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:29,204 | INFO     | [data] copytool_in thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:29,205 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:29,254 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:29,304 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:31,004 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 14:52:16] 2025-11-27 19:51:55,917 | INFO     | PID=1364683 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 14:52:16] 2025-11-27 19:51:55,917 | INFO     | .. there are 97 such processes running
[2025-11-27 14:52:16] 2025-11-27 19:51:55,917 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 14:52:16] 2025-11-27 19:51:55,917 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 14:52:16] 2025-11-27 19:51:55,917 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 14:52:16] 2025-11-27 19:51:59,562 [wrapper] supervise_pilot (15 min periods counter: 46)
[2025-11-27 14:52:16] 2025-11-27 19:52:08,856 | INFO     | [monitor] cgroup control has ended
[2025-11-27 14:52:16] 2025-11-27 19:52:10,638 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140354503714624)>', '<ExcThread(monitor, started 140353860515584)>']
[2025-11-27 14:52:16] 2025-11-27 19:52:11,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 14:52:16] 2025-11-27 19:52:11,025 | INFO     | [monitor] control thread has ended
[2025-11-27 14:52:16] 2025-11-27 19:52:15,664 | INFO     | all workflow threads have been joined
[2025-11-27 14:52:16] 2025-11-27 19:52:15,664 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 14:52:16] 2025-11-27 19:52:15,665 | INFO     | traces error code: 0
[2025-11-27 14:52:16] 2025-11-27 19:52:15,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 14:52:16] 2025-11-27 19:52:15,960 [wrapper] ==== pilot stdout END ====
[2025-11-27 14:52:16] 2025-11-27 19:52:15,972 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 14:52:16] 2025-11-27 19:52:15,986 [wrapper] pilotpid: 1364683
[2025-11-27 14:52:16] 2025-11-27 19:52:15,988 [wrapper] Pilot exit status: 0
[2025-11-27 14:52:16] 2025-11-27 19:52:15,999 [wrapper] pandaids: 6896715502
[2025-11-27 14:52:16] 2025-11-27 19:52:16,197 [wrapper] cleanup supervisor_pilot 3627605 1364685
[2025-11-27 14:52:16] 2025-11-27 19:52:16,221 [wrapper] Test setup, not cleaning
[2025-11-27 14:52:16] 2025-11-27 19:52:16,241 [wrapper] apfmon messages muted
[2025-11-27 14:52:16] 2025-11-27 19:52:16,255 [wrapper] ==== wrapper stdout END ====
[2025-11-27 14:52:16] 2025-11-27 19:52:16,261 [wrapper] ==== wrapper stderr END ====
[2025-11-27 14:52:16]  *** Error codes and diagnostics ***
[2025-11-27 14:52:16]     "exeErrorCode": 0,
[2025-11-27 14:52:16]     "exeErrorDiag": "",
[2025-11-27 14:52:16]     "pilotErrorCode": 0,
[2025-11-27 14:52:16]     "pilotErrorDiag": "",
[2025-11-27 14:52:16]  *** Listing of results directory ***
[2025-11-27 14:52:16] total 1310288
[2025-11-27 14:52:16] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-27 14:52:16] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:50 queuedata.json
[2025-11-27 14:52:16] -rwx------. 1 boincer umatlas     36292 Nov 25 01:55 runpilot2-wrapper.sh
[2025-11-27 14:52:16] -rw-r--r--. 1 boincer umatlas       100 Nov 27 03:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 14:52:16] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 03:36 run_atlas
[2025-11-27 14:52:16] -rw-r--r--. 1 boincer umatlas       105 Nov 27 03:36 job.xml
[2025-11-27 14:52:16] -rw-r--r--. 2 boincer umatlas 410370176 Nov 27 03:36 EVNT.47483658._002129.pool.root.1
[2025-11-27 14:52:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 03:36 start_atlas.sh
[2025-11-27 14:52:16] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 03:36 shared
[2025-11-27 14:52:16] -rw-r--r--. 2 boincer umatlas    590109 Nov 27 03:36 input.tar.gz
[2025-11-27 14:52:16] -rw-r--r--. 1 boincer umatlas         0 Nov 27 03:36 boinc_lockfile
[2025-11-27 14:52:16] -rw-r--r--. 1 boincer umatlas      2784 Nov 27 03:36 pandaJob.out
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas        57 Nov 27 03:36 setup.sh.local
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas    991573 Nov 27 03:36 agis_schedconf.cvmfs.json
[2025-11-27 14:52:16] drwx------. 5 boincer umatlas      4096 Nov 27 03:36 pilot3
[2025-11-27 14:52:16] -rw-r--r--. 1 boincer umatlas       532 Nov 27 14:39 boinc_task_state.xml
[2025-11-27 14:52:16] -rw-r--r--. 1 boincer umatlas      6946 Nov 27 14:49 init_data.xml
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas 912984944 Nov 27 14:50 HITS.47556161._001125.pool.root.1
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas      1066 Nov 27 14:50 memory_monitor_summary.json
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas   1516240 Nov 27 14:51 agis_ddmendpoints.agis.ALL.json
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas   1892211 Nov 27 14:51 log.47556161._001125.job.log.tgz.1
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas        95 Nov 27 14:51 pilot_heartbeat.json
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas      8619 Nov 27 14:51 heartbeat.json
[2025-11-27 14:52:16] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 14:52 boinc_mmap_file
[2025-11-27 14:52:16] -rw-r--r--. 1 boincer umatlas        29 Nov 27 14:52 wrapper_checkpoint.txt
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas      4824 Nov 27 14:52 pilotlog.txt
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas   5333332 Nov 27 14:52 log.47556161._001125.job.log.1
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas       353 Nov 27 14:52 output.list
[2025-11-27 14:52:16] -rw-r--r--. 1 boincer umatlas       620 Nov 27 14:52 runtime_log
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas   7249920 Nov 27 14:52 result.tar.gz
[2025-11-27 14:52:16] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 14:52 runtime_log.err
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas       664 Nov 27 14:52 ElKKDmG81h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzDMKDmD4P8Kn.diag
[2025-11-27 14:52:16] -rw-r--r--. 1 boincer umatlas     21106 Nov 27 14:52 stderr.txt
[2025-11-27 14:52:16] HITS file was successfully produced:
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas 912984944 Nov 27 14:50 shared/HITS.pool.root.1
[2025-11-27 14:52:16]  *** Contents of shared directory: ***
[2025-11-27 14:52:16] total 1300028
[2025-11-27 14:52:16] -rw-r--r--. 2 boincer umatlas 410370176 Nov 27 03:36 ATLAS.root_0
[2025-11-27 14:52:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 03:36 start_atlas.sh
[2025-11-27 14:52:16] -rw-r--r--. 2 boincer umatlas    590109 Nov 27 03:36 input.tar.gz
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas 912984944 Nov 27 14:50 HITS.pool.root.1
[2025-11-27 14:52:16] -rw-------. 1 boincer umatlas   7249920 Nov 27 14:52 result.tar.gz
14:52:18 (1356533): run_atlas exited; CPU time 184935.169485
14:52:18 (1356533): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN