Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
01:42:02 (1795009): wrapper (7.7.26015): starting
01:42:02 (1795009): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 01:42:02] Arguments: --nthreads 4
[2025-11-27 01:42:02] Threads: 4
[2025-11-27 01:42:02] Checking for CVMFS
[2025-11-27 01:42:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:42:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:42:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:42:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:42:02] 2.13.2.0 774864 5401 58740 153356 1 90 3318004 4096000 5100 130560 0 15841147 99.962 611933 1283 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 01:42:02] CVMFS is ok
[2025-11-27 01:42:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:42:02] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 01:42:02] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 01:42:02] Further information can be found at the LHC@home message board.
[2025-11-27 01:42:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:42:02] Checking for apptainer binary...
[2025-11-27 01:42:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:42:02] Running /usr/bin/apptainer --version
[2025-11-27 01:42:02] apptainer version 1.4.3
[2025-11-27 01:42:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:42:03] msi670e
[2025-11-27 01:42:03] apptainer works
[2025-11-27 01:42:03] Set ATHENA_PROC_NUMBER=4
[2025-11-27 01:42:03] Set ATHENA_CORE_NUMBER=4
[2025-11-27 01:42:03] Starting ATLAS job with PandaID=6892528020
[2025-11-27 01:42:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 08:24:55]  *** The last 200 lines of the pilot log: ***
[2025-11-27 08:24:55] 2025-11-27 15:23:49,045 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:24:55] 2025-11-27 15:23:49,325 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 08:24:55] 2025-11-27 15:23:49,328 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 5027.730687500001
[2025-11-27 08:24:55] 2025-11-27 15:23:49,330 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6892528020/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 08:24:55] 2025-11-27 15:23:49,331 | INFO     | extracted standard info from prmon json
[2025-11-27 08:24:55] 2025-11-27 15:23:49,331 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 08:24:55] 2025-11-27 15:23:49,331 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 08:24:55] 2025-11-27 15:23:49,334 | INFO     | fitting pss+swap vs Time
[2025-11-27 08:24:55] 2025-11-27 15:23:49,334 | INFO     | sum of square deviations: 19110274590.0
[2025-11-27 08:24:55] 2025-11-27 15:23:49,336 | INFO     | sum of deviations: 137597566166.0
[2025-11-27 08:24:55] 2025-11-27 15:23:49,336 | INFO     | mean x: 1764244965.0
[2025-11-27 08:24:55] 2025-11-27 15:23:49,336 | INFO     | mean y: 2254039.359493671
[2025-11-27 08:24:55] 2025-11-27 15:23:49,336 | INFO     | intersect: -12700641053.087206
[2025-11-27 08:24:55] 2025-11-27 15:23:49,336 | INFO     | chi2: 2.532642969155405
[2025-11-27 08:24:55] 2025-11-27 15:23:49,336 | INFO     | sum of square deviations: 18393712317.5
[2025-11-27 08:24:55] 2025-11-27 15:23:49,338 | INFO     | sum of deviations: 173409941120.00003
[2025-11-27 08:24:55] 2025-11-27 15:23:49,338 | INFO     | mean x: 1764244812.5
[2025-11-27 08:24:55] 2025-11-27 15:23:49,338 | INFO     | mean y: 2261602.035897436
[2025-11-27 08:24:55] 2025-11-27 15:23:49,338 | INFO     | intersect: -16630465048.02798
[2025-11-27 08:24:55] 2025-11-27 15:23:49,338 | INFO     | chi2: 1.607221815398715
[2025-11-27 08:24:55] 2025-11-27 15:23:49,338 | INFO     | current chi2=1.607221815398715 (change=36.53973990914727 %)
[2025-11-27 08:24:55] 2025-11-27 15:23:49,338 | INFO     | sum of square deviations: 17695289920.0
[2025-11-27 08:24:55] 2025-11-27 15:23:49,340 | INFO     | sum of deviations: 169404525265.0
[2025-11-27 08:24:55] 2025-11-27 15:23:49,340 | INFO     | mean x: 1764244660.0
[2025-11-27 08:24:55] 2025-11-27 15:23:49,340 | INFO     | mean y: 2260727.4571428574
[2025-11-27 08:24:55] 2025-11-27 15:23:49,340 | INFO     | intersect: -16887602644.64924
[2025-11-27 08:24:55] 2025-11-27 15:23:49,340 | INFO     | chi2: 1.6067993613469154
[2025-11-27 08:24:55] 2025-11-27 15:23:49,340 | INFO     | current chi2=1.6067993613469154 (change=0.026284738531553314 %)
[2025-11-27 08:24:55] 2025-11-27 15:23:49,340 | INFO     | right removable region: 384
[2025-11-27 08:24:55] 2025-11-27 15:23:49,341 | INFO     | sum of square deviations: 18393712317.5
[2025-11-27 08:24:55] 2025-11-27 15:23:49,342 | INFO     | sum of deviations: 76855092458.49998
[2025-11-27 08:24:55] 2025-11-27 15:23:49,342 | INFO     | mean x: 1764245117.5
[2025-11-27 08:24:55] 2025-11-27 15:23:49,342 | INFO     | mean y: 2266897.2025641026
[2025-11-27 08:24:55] 2025-11-27 15:23:49,342 | INFO     | intersect: -7369340274.010859
[2025-11-27 08:24:55] 2025-11-27 15:23:49,342 | INFO     | chi2: 0.9593028801527776
[2025-11-27 08:24:55] 2025-11-27 15:23:49,343 | INFO     | current chi2=0.9593028801527776 (change=62.12245895548833 %)
[2025-11-27 08:24:55] 2025-11-27 15:23:49,343 | INFO     | sum of square deviations: 17695289920.0
[2025-11-27 08:24:55] 2025-11-27 15:23:49,344 | INFO     | sum of deviations: 70394496661.99998
[2025-11-27 08:24:55] 2025-11-27 15:23:49,344 | INFO     | mean x: 1764245270.0
[2025-11-27 08:24:55] 2025-11-27 15:23:49,344 | INFO     | mean y: 2268306.5116883116
[2025-11-27 08:24:55] 2025-11-27 15:23:49,344 | INFO     | intersect: -7016161927.26457
[2025-11-27 08:24:55] 2025-11-27 15:23:49,345 | INFO     | chi2: 0.9565996460653001
[2025-11-27 08:24:55] 2025-11-27 15:23:49,345 | INFO     | current chi2=0.9565996460653001 (change=0.2817915116701213 %)
[2025-11-27 08:24:55] 2025-11-27 15:23:49,345 | INFO     | left removable region: 20
[2025-11-27 08:24:55] 2025-11-27 15:23:49,345 | INFO     | sum of square deviations: 14954754815.0
[2025-11-27 08:24:55] 2025-11-27 15:23:49,346 | INFO     | sum of deviations: 94671384479.49998
[2025-11-27 08:24:55] 2025-11-27 15:23:49,346 | INFO     | mean x: 1764245239.5
[2025-11-27 08:24:55] 2025-11-27 15:23:49,346 | INFO     | mean y: 2277284.980769231
[2025-11-27 08:24:55] 2025-11-27 15:23:49,346 | INFO     | intersect: -11166313671.60938
[2025-11-27 08:24:55] 2025-11-27 15:23:49,347 | INFO     | chi2: 0.020712596824572486
[2025-11-27 08:24:55] 2025-11-27 15:23:49,347 | INFO     | current memory leak: 6.33 B/s (using 364 data points, chi2=0.02)
[2025-11-27 08:24:55] 2025-11-27 15:23:49,347 | INFO     | could have reported an average CPU frequency of 4956 MHz (17 samples)
[2025-11-27 08:24:55] 2025-11-27 15:23:49,347 | INFO     | ..............................
[2025-11-27 08:24:55] 2025-11-27 15:23:49,347 | INFO     | . Timing measurements:
[2025-11-27 08:24:55] 2025-11-27 15:23:49,347 | INFO     | . get job = 0 s
[2025-11-27 08:24:55] 2025-11-27 15:23:49,347 | INFO     | . initial setup = 2 s
[2025-11-27 08:24:55] 2025-11-27 15:23:49,347 | INFO     | . payload setup = 2 s
[2025-11-27 08:24:55] 2025-11-27 15:23:49,347 | INFO     | . stage-in = 0 s
[2025-11-27 08:24:55] 2025-11-27 15:23:49,347 | INFO     | . payload execution = 24073 s
[2025-11-27 08:24:55] 2025-11-27 15:23:49,347 | INFO     | . stage-out = 2 s
[2025-11-27 08:24:55] 2025-11-27 15:23:49,347 | INFO     | . log creation = 0 s
[2025-11-27 08:24:55] 2025-11-27 15:23:49,347 | INFO     | ..............................
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | 
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | job summary report
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | --------------------------------------------------
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | PanDA job id: 6892528020
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | task id: 47493029
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | errors: (none)
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | pilot state: finished 
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | transexitcode: 0
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | exeerrorcode: 0
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | exeerrordiag: 
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | exitcode: 0
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | exitmsg: OK
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | cpuconsumptiontime: 95555 s
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | nevents: 1000
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | neventsw: 0
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | pid: 1805534
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | pgrp: 1805534
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | corecount: 4
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | event service: False
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | sizes: {0: 2284311, 2: 2284573, 11: 2284601, 24079: 2320885, 24082: 2329893, 24083: 2329949, 24087: 2330415}
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | --------------------------------------------------
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | 
[2025-11-27 08:24:55] 2025-11-27 15:23:49,389 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-27 08:24:55] 2025-11-27 15:23:49,401 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,401 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | job 6892528020 has completed (purged errors)
[2025-11-27 08:24:55] 2025-11-27 15:23:49,402 | INFO     | overall cleanup function is called
[2025-11-27 08:24:55] 2025-11-27 15:23:50,412 | INFO     | --- collectZombieJob: --- 10, [1805534]
[2025-11-27 08:24:55] 2025-11-27 15:23:50,412 | INFO     | zombie collector waiting for pid 1805534
[2025-11-27 08:24:55] 2025-11-27 15:23:50,412 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 08:24:55] 2025-11-27 15:23:50,412 | INFO     | collected zombie processes
[2025-11-27 08:24:55] 2025-11-27 15:23:50,412 | INFO     | will attempt to kill all subprocesses of pid=1805534
[2025-11-27 08:24:55] 2025-11-27 15:23:50,497 | INFO     | process IDs to be killed: [1805534] (in reverse order)
[2025-11-27 08:24:55] 2025-11-27 15:23:50,535 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 08:24:55] 2025-11-27 15:23:50,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 08:24:55] 2025-11-27 15:23:50,539 | INFO     | did not find any defunct processes belonging to 1805534
[2025-11-27 08:24:55] 2025-11-27 15:23:50,541 | INFO     | did not find any defunct processes belonging to 1805534
[2025-11-27 08:24:55] 2025-11-27 15:23:50,542 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 08:24:55] 2025-11-27 15:23:50,542 | INFO     | ready for new job
[2025-11-27 08:24:55] 2025-11-27 15:23:50,542 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 08:24:55] 2025-11-27 15:23:50,544 | INFO     | ***************************************
[2025-11-27 08:24:55] 2025-11-27 15:23:50,544 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 08:24:55] 2025-11-27 15:23:50,544 | INFO     | ***************************************
[2025-11-27 08:24:55] 2025-11-27 15:23:50,544 | INFO     | 
[2025-11-27 08:24:55] 2025-11-27 15:23:50,545 | INFO     | architecture information:
[2025-11-27 08:24:55] 2025-11-27 15:23:50,545 | INFO     | executing command: cat /etc/os-release
[2025-11-27 08:24:55] 2025-11-27 15:23:50,554 | INFO     | cat /etc/os-release:
[2025-11-27 08:24:55] NAME="CentOS Linux"
[2025-11-27 08:24:55] VERSION="7 (Core)"
[2025-11-27 08:24:55] ID="centos"
[2025-11-27 08:24:55] ID_LIKE="rhel fedora"
[2025-11-27 08:24:55] VERSION_ID="7"
[2025-11-27 08:24:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 08:24:55] ANSI_COLOR="0;31"
[2025-11-27 08:24:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 08:24:55] HOME_URL="https://www.centos.org/"
[2025-11-27 08:24:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 08:24:55] 
[2025-11-27 08:24:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 08:24:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 08:24:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 08:24:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 08:24:55] 
[2025-11-27 08:24:55] 2025-11-27 15:23:50,554 | INFO     | ***************************************
[2025-11-27 08:24:55] 2025-11-27 15:23:51,056 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-27 08:24:55] 2025-11-27 15:23:51,066 | INFO     | sufficient remaining disk space (437892677632 B)
[2025-11-27 08:24:55] 2025-11-27 15:23:51,066 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 08:24:55] 2025-11-27 15:23:51,066 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 08:24:55] 2025-11-27 15:23:51,066 | INFO     | update_server=False
[2025-11-27 08:24:55] 2025-11-27 15:23:51,066 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 08:24:55] 2025-11-27 15:23:51,066 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:24:55] 2025-11-27 15:23:51,066 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 08:24:55] 2025-11-27 15:23:51,548 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 08:24:55] 2025-11-27 15:23:51,548 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 08:24:55] 2025-11-27 15:23:51,548 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:24:55] 2025-11-27 15:23:51,548 | INFO     | will abort loop
[2025-11-27 08:24:55] 2025-11-27 15:23:51,676 | INFO     | all payload control threads have been joined
[2025-11-27 08:24:55] 2025-11-27 15:23:51,830 | INFO     | all job control threads have been joined
[2025-11-27 08:24:55] 2025-11-27 15:23:51,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 08:24:55] 2025-11-27 15:23:52,071 | INFO     | [job] retrieve thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:52,071 | INFO     | [job] queue monitor thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:52,127 | INFO     | all data control threads have been joined
[2025-11-27 08:24:55] 2025-11-27 15:23:52,297 | INFO     | [payload] validate_post thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:52,454 | INFO     | [data] copytool_in thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:52,553 | INFO     | [job] job monitor thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:52,681 | INFO     | [payload] control thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:52,835 | INFO     | [job] control thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:52,990 | INFO     | [job] validate thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:53,071 | INFO     | [data] copytool_out thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:53,077 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:53,133 | INFO     | [data] control thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:53,134 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:53,202 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:53,273 | INFO     | [payload] failed_post thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:53,382 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:23:55,957 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 08:24:55] 2025-11-27 15:24:21,858 | INFO     | PID=1798870 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 08:24:55] 2025-11-27 15:24:21,858 | INFO     | .. there are 7 such processes running
[2025-11-27 08:24:55] 2025-11-27 15:24:21,859 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 08:24:55] 2025-11-27 15:24:21,859 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 08:24:55] 2025-11-27 15:24:21,859 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 08:24:55] 2025-11-27 15:24:48,677 | INFO     | [monitor] cgroup control has ended
[2025-11-27 08:24:55] 2025-11-27 15:24:50,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126774612223808)>', '<ExcThread(monitor, started 126774130235136)>']
[2025-11-27 08:24:55] 2025-11-27 15:24:51,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 08:24:55] 2025-11-27 15:24:51,003 | INFO     | [monitor] control thread has ended
[2025-11-27 08:24:55] 2025-11-27 15:24:55,680 | INFO     | all workflow threads have been joined
[2025-11-27 08:24:55] 2025-11-27 15:24:55,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 08:24:55] 2025-11-27 15:24:55,680 | INFO     | traces error code: 0
[2025-11-27 08:24:55] 2025-11-27 15:24:55,680 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 08:24:55] 2025-11-27 15:24:55,743 [wrapper] ==== pilot stdout END ====
[2025-11-27 08:24:55] 2025-11-27 15:24:55,745 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 08:24:55] 2025-11-27 15:24:55,746 [wrapper] pilotpid: 1798870
[2025-11-27 08:24:55] 2025-11-27 15:24:55,748 [wrapper] Pilot exit status: 0
[2025-11-27 08:24:55] 2025-11-27 15:24:55,753 [wrapper] pandaids: 6892528020
[2025-11-27 08:24:55] 2025-11-27 15:24:55,776 [wrapper] cleanup supervisor_pilot 2158086 1798871
[2025-11-27 08:24:55] 2025-11-27 15:24:55,778 [wrapper] Test setup, not cleaning
[2025-11-27 08:24:55] 2025-11-27 15:24:55,780 [wrapper] apfmon messages muted
[2025-11-27 08:24:55] 2025-11-27 15:24:55,781 [wrapper] ==== wrapper stdout END ====
[2025-11-27 08:24:55] 2025-11-27 15:24:55,783 [wrapper] ==== wrapper stderr END ====
[2025-11-27 08:24:55]  *** Error codes and diagnostics ***
[2025-11-27 08:24:55]     "exeErrorCode": 0,
[2025-11-27 08:24:55]     "exeErrorDiag": "",
[2025-11-27 08:24:55]     "pilotErrorCode": 0,
[2025-11-27 08:24:55]     "pilotErrorDiag": "",
[2025-11-27 08:24:55]  *** Listing of results directory ***
[2025-11-27 08:24:55] total 1313372
[2025-11-27 08:24:55] -rw-r--r-- 1 boinc boinc    576529 Nov 19 00:00 pilot3.tar.gz
[2025-11-27 08:24:55] -rwx------ 1 boinc boinc     36292 Nov 19 00:11 runpilot2-wrapper.sh
[2025-11-27 08:24:55] -rw-r--r-- 1 boinc boinc      5112 Nov 19 00:12 queuedata.json
[2025-11-27 08:24:55] -rw-r--r-- 1 boinc boinc       100 Nov 27 01:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 08:24:55] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 01:42 run_atlas
[2025-11-27 08:24:55] -rw-r--r-- 1 boinc boinc       105 Nov 27 01:42 job.xml
[2025-11-27 08:24:55] -rw-r--r-- 2 boinc boinc     15120 Nov 27 01:42 start_atlas.sh
[2025-11-27 08:24:55] drwxrwx--x 2 boinc boinc      4096 Nov 27 01:42 shared
[2025-11-27 08:24:55] -rw-r--r-- 2 boinc boinc    590093 Nov 27 01:42 input.tar.gz
[2025-11-27 08:24:55] -rw-r--r-- 1 boinc boinc      9949 Nov 27 01:42 init_data.xml
[2025-11-27 08:24:55] -rw-r--r-- 2 boinc boinc 408026437 Nov 27 01:42 EVNT.47493027._000145.pool.root.1
[2025-11-27 08:24:55] -rw-r--r-- 1 boinc boinc         0 Nov 27 01:42 boinc_lockfile
[2025-11-27 08:24:55] -rw-r--r-- 1 boinc boinc      2773 Nov 27 01:42 pandaJob.out
[2025-11-27 08:24:55] -rw------- 1 boinc boinc    991573 Nov 27 01:42 agis_schedconf.cvmfs.json
[2025-11-27 08:24:55] drwx------ 5 boinc boinc      4096 Nov 27 01:42 pilot3
[2025-11-27 08:24:55] -rw-r--r-- 1 boinc boinc       531 Nov 27 08:20 boinc_task_state.xml
[2025-11-27 08:24:55] -rw------- 1 boinc boinc 923481097 Nov 27 08:23 HITS.47493029._001408.pool.root.1
[2025-11-27 08:24:55] -rw------- 1 boinc boinc      1032 Nov 27 08:23 memory_monitor_summary.json
[2025-11-27 08:24:55] -rw------- 1 boinc boinc   1516240 Nov 27 08:23 agis_ddmendpoints.agis.ALL.json
[2025-11-27 08:24:55] -rw------- 1 boinc boinc   1233650 Nov 27 08:23 log.47493029._001408.job.log.tgz.1
[2025-11-27 08:24:55] -rw------- 1 boinc boinc      8539 Nov 27 08:23 heartbeat.json
[2025-11-27 08:24:55] -rw------- 1 boinc boinc        95 Nov 27 08:24 pilot_heartbeat.json
[2025-11-27 08:24:55] -rw-r--r-- 1 boinc boinc        28 Nov 27 08:24 wrapper_checkpoint.txt
[2025-11-27 08:24:55] -rw-r--r-- 1 boinc boinc      8192 Nov 27 08:24 boinc_mmap_file
[2025-11-27 08:24:55] -rw------- 1 boinc boinc      5017 Nov 27 08:24 pilotlog.txt
[2025-11-27 08:24:55] -rw------- 1 boinc boinc   3496358 Nov 27 08:24 log.47493029._001408.job.log.1
[2025-11-27 08:24:55] -rw------- 1 boinc boinc       353 Nov 27 08:24 output.list
[2025-11-27 08:24:55] -rw-r--r-- 1 boinc boinc       620 Nov 27 08:24 runtime_log
[2025-11-27 08:24:55] -rw------- 1 boinc boinc   4751360 Nov 27 08:24 result.tar.gz
[2025-11-27 08:24:55] -rw------- 1 boinc boinc       660 Nov 27 08:24 uScLDmHXrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNlGKDmQuFhBo.diag
[2025-11-27 08:24:55] -rw-r--r-- 1 boinc boinc      8792 Nov 27 08:24 runtime_log.err
[2025-11-27 08:24:55] -rw-r--r-- 1 boinc boinc     21326 Nov 27 08:24 stderr.txt
[2025-11-27 08:24:55] HITS file was successfully produced:
[2025-11-27 08:24:55] -rw------- 1 boinc boinc 923481097 Nov 27 08:23 shared/HITS.pool.root.1
[2025-11-27 08:24:55]  *** Contents of shared directory: ***
[2025-11-27 08:24:55] total 1305548
[2025-11-27 08:24:55] -rw-r--r-- 2 boinc boinc     15120 Nov 27 01:42 start_atlas.sh
[2025-11-27 08:24:55] -rw-r--r-- 2 boinc boinc    590093 Nov 27 01:42 input.tar.gz
[2025-11-27 08:24:55] -rw-r--r-- 2 boinc boinc 408026437 Nov 27 01:42 ATLAS.root_0
[2025-11-27 08:24:55] -rw------- 1 boinc boinc 923481097 Nov 27 08:23 HITS.pool.root.1
[2025-11-27 08:24:55] -rw------- 1 boinc boinc   4751360 Nov 27 08:24 result.tar.gz
08:24:57 (1795009): run_atlas exited; CPU time 95521.002199
08:24:57 (1795009): called boinc_finish(0)

</stderr_txt>
]]>

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