Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
06:37:00 (320315): wrapper (7.7.26015): starting
06:37:00 (320315): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 06:37:00] Arguments: --nthreads 8
[2025-11-27 06:37:00] Threads: 8
[2025-11-27 06:37:00] Checking for CVMFS
[2025-11-27 06:37:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 06:37:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 06:37:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 06:37:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 06:37:00] 2.11.3.0 1658007 5694 84188 153366 2 81 3388934 4096001 1965 130560 0 9320305 99.920 678424 715 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 06:37:00] CVMFS is ok
[2025-11-27 06:37:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 06:37:00] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 06:37:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 06:37:00] Further information can be found at the LHC@home message board.
[2025-11-27 06:37:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 06:37:00] Checking for apptainer binary...
[2025-11-27 06:37:00] apptainer is not installed, using version from CVMFS
[2025-11-27 06:37:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 06:37:00] officedc-System-Product-Name
[2025-11-27 06:37:00] apptainer works
[2025-11-27 06:37:00] Set ATHENA_PROC_NUMBER=8
[2025-11-27 06:37:00] Set ATHENA_CORE_NUMBER=8
[2025-11-27 06:37:00] Starting ATLAS job with PandaID=6891571199
[2025-11-27 06:37:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:17:00]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:17:00] 2025-11-27 19:16:28,133 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 12:17:00] 2025-11-27 19:16:28,136 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.93475
[2025-11-27 12:17:00] 2025-11-27 19:16:28,141 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6891571199/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 12:17:00] 2025-11-27 19:16:28,141 | INFO     | extracted standard info from prmon json
[2025-11-27 12:17:00] 2025-11-27 19:16:28,141 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 12:17:00] 2025-11-27 19:16:28,141 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 12:17:00] 2025-11-27 19:16:28,145 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:17:00] 2025-11-27 19:16:28,146 | INFO     | sum of square deviations: 11553673985.784445
[2025-11-27 12:17:00] 2025-11-27 19:16:28,148 | INFO     | sum of deviations: 207567243440.53888
[2025-11-27 12:17:00] 2025-11-27 19:16:28,148 | INFO     | mean x: 1764260807.766467
[2025-11-27 12:17:00] 2025-11-27 19:16:28,148 | INFO     | mean y: 2835408.583832335
[2025-11-27 12:17:00] 2025-11-27 19:16:28,148 | INFO     | intersect: -31692948376.629185
[2025-11-27 12:17:00] 2025-11-27 19:16:28,148 | INFO     | chi2: 5.54685635040018
[2025-11-27 12:17:00] 2025-11-27 19:16:28,149 | INFO     | sum of square deviations: 11042556662.924065
[2025-11-27 12:17:00] 2025-11-27 19:16:28,151 | INFO     | sum of deviations: 296794986840.699
[2025-11-27 12:17:00] 2025-11-27 19:16:28,151 | INFO     | mean x: 1764260655.2705166
[2025-11-27 12:17:00] 2025-11-27 19:16:28,151 | INFO     | mean y: 2861955.711246201
[2025-11-27 12:17:00] 2025-11-27 19:16:28,151 | INFO     | intersect: -47415841334.50312
[2025-11-27 12:17:00] 2025-11-27 19:16:28,151 | INFO     | chi2: 3.2369360343919835
[2025-11-27 12:17:00] 2025-11-27 19:16:28,151 | INFO     | current chi2=3.2369360343919835 (change=41.643773879984224 %)
[2025-11-27 12:17:00] 2025-11-27 19:16:28,152 | INFO     | sum of square deviations: 10546681866.172825
[2025-11-27 12:17:00] 2025-11-27 19:16:28,154 | INFO     | sum of deviations: 294160642791.86426
[2025-11-27 12:17:00] 2025-11-27 19:16:28,154 | INFO     | mean x: 1764260502.7654321
[2025-11-27 12:17:00] 2025-11-27 19:16:28,154 | INFO     | mean y: 2861124.827160494
[2025-11-27 12:17:00] 2025-11-27 19:16:28,154 | INFO     | intersect: -49204653630.15263
[2025-11-27 12:17:00] 2025-11-27 19:16:28,154 | INFO     | chi2: 3.1975838586404017
[2025-11-27 12:17:00] 2025-11-27 19:16:28,154 | INFO     | current chi2=3.1975838586404017 (change=1.215722996484037 %)
[2025-11-27 12:17:00] 2025-11-27 19:16:28,154 | INFO     | right removable region: 323
[2025-11-27 12:17:00] 2025-11-27 19:16:28,154 | INFO     | sum of square deviations: 11042502372.924068
[2025-11-27 12:17:00] 2025-11-27 19:16:28,156 | INFO     | sum of deviations: 97916119336.26749
[2025-11-27 12:17:00] 2025-11-27 19:16:28,156 | INFO     | mean x: 1764260960.2705166
[2025-11-27 12:17:00] 2025-11-27 19:16:28,156 | INFO     | mean y: 2868083.367781155
[2025-11-27 12:17:00] 2025-11-27 19:16:28,156 | INFO     | intersect: -15641193461.028471
[2025-11-27 12:17:00] 2025-11-27 19:16:28,157 | INFO     | chi2: 2.637713107356635
[2025-11-27 12:17:00] 2025-11-27 19:16:28,157 | INFO     | current chi2=2.637713107356635 (change=52.44670240709702 %)
[2025-11-27 12:17:00] 2025-11-27 19:16:28,157 | INFO     | sum of square deviations: 10546633372.552439
[2025-11-27 12:17:00] 2025-11-27 19:16:28,159 | INFO     | sum of deviations: 69457459579.68524
[2025-11-27 12:17:00] 2025-11-27 19:16:28,159 | INFO     | mean x: 1764261112.7746913
[2025-11-27 12:17:00] 2025-11-27 19:16:28,159 | INFO     | mean y: 2876797.3518518517
[2025-11-27 12:17:00] 2025-11-27 19:16:28,159 | INFO     | intersect: -11616100614.66962
[2025-11-27 12:17:00] 2025-11-27 19:16:28,159 | INFO     | chi2: 2.423863247513358
[2025-11-27 12:17:00] 2025-11-27 19:16:28,159 | INFO     | current chi2=2.423863247513358 (change=8.107396488528082 %)
[2025-11-27 12:17:00] 2025-11-27 19:16:28,160 | INFO     | left removable region: 20
[2025-11-27 12:17:00] 2025-11-27 19:16:28,160 | INFO     | sum of square deviations: 8625941130.712837
[2025-11-27 12:17:00] 2025-11-27 19:16:28,161 | INFO     | sum of deviations: 135096069657.6832
[2025-11-27 12:17:00] 2025-11-27 19:16:28,162 | INFO     | mean x: 1764261082.2772276
[2025-11-27 12:17:00] 2025-11-27 19:16:28,162 | INFO     | mean y: 2911645.4323432343
[2025-11-27 12:17:00] 2025-11-27 19:16:28,162 | INFO     | intersect: -27628245865.837082
[2025-11-27 12:17:00] 2025-11-27 19:16:28,162 | INFO     | chi2: 0.018802636801479276
[2025-11-27 12:17:00] 2025-11-27 19:16:28,162 | INFO     | current memory leak: 15.66 B/s (using 303 data points, chi2=0.02)
[2025-11-27 12:17:00] 2025-11-27 19:16:28,162 | INFO     | could have reported an average CPU frequency of 3977 MHz (15 samples)
[2025-11-27 12:17:00] 2025-11-27 19:16:28,162 | INFO     | ..............................
[2025-11-27 12:17:00] 2025-11-27 19:16:28,163 | INFO     | . Timing measurements:
[2025-11-27 12:17:00] 2025-11-27 19:16:28,163 | INFO     | . get job = 0 s
[2025-11-27 12:17:00] 2025-11-27 19:16:28,163 | INFO     | . initial setup = 4 s
[2025-11-27 12:17:00] 2025-11-27 19:16:28,163 | INFO     | . payload setup = 3 s
[2025-11-27 12:17:00] 2025-11-27 19:16:28,163 | INFO     | . stage-in = 0 s
[2025-11-27 12:17:00] 2025-11-27 19:16:28,163 | INFO     | . payload execution = 20327 s
[2025-11-27 12:17:00] 2025-11-27 19:16:28,163 | INFO     | . stage-out = 5 s
[2025-11-27 12:17:00] 2025-11-27 19:16:28,163 | INFO     | . log creation = 0 s
[2025-11-27 12:17:00] 2025-11-27 19:16:28,163 | INFO     | ..............................
[2025-11-27 12:17:00] 2025-11-27 19:16:28,228 | INFO     | 
[2025-11-27 12:17:00] 2025-11-27 19:16:28,228 | INFO     | job summary report
[2025-11-27 12:17:00] 2025-11-27 19:16:28,228 | INFO     | --------------------------------------------------
[2025-11-27 12:17:00] 2025-11-27 19:16:28,228 | INFO     | PanDA job id: 6891571199
[2025-11-27 12:17:00] 2025-11-27 19:16:28,228 | INFO     | task id: 47493068
[2025-11-27 12:17:00] 2025-11-27 19:16:28,228 | INFO     | errors: (none)
[2025-11-27 12:17:00] 2025-11-27 19:16:28,228 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:17:00] 2025-11-27 19:16:28,228 | INFO     | pilot state: finished 
[2025-11-27 12:17:00] 2025-11-27 19:16:28,228 | INFO     | transexitcode: 0
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | exeerrorcode: 0
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | exeerrordiag: 
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | exitcode: 0
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | exitmsg: OK
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | cpuconsumptiontime: 152383 s
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | nevents: 1000
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | neventsw: 0
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | pid: 335093
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | pgrp: 335093
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | corecount: 8
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | event service: False
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | sizes: {0: 2284311, 1: 2284311, 3: 2284601, 11: 2284629, 20334: 2319065, 20339: 2328073, 20341: 2328257, 20344: 2328503}
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | --------------------------------------------------
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | 
[2025-11-27 12:17:00] 2025-11-27 19:16:28,229 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-27 12:17:00] 2025-11-27 19:16:28,245 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,245 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:17:00] 2025-11-27 19:16:28,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,247 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:17:00] 2025-11-27 19:16:28,247 | INFO     | job 6891571199 has completed (purged errors)
[2025-11-27 12:17:00] 2025-11-27 19:16:28,247 | INFO     | overall cleanup function is called
[2025-11-27 12:17:00] 2025-11-27 19:16:29,258 | INFO     | --- collectZombieJob: --- 10, [335093]
[2025-11-27 12:17:00] 2025-11-27 19:16:29,258 | INFO     | zombie collector waiting for pid 335093
[2025-11-27 12:17:00] 2025-11-27 19:16:29,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:17:00] 2025-11-27 19:16:29,258 | INFO     | collected zombie processes
[2025-11-27 12:17:00] 2025-11-27 19:16:29,258 | INFO     | will attempt to kill all subprocesses of pid=335093
[2025-11-27 12:17:00] 2025-11-27 19:16:29,380 | INFO     | process IDs to be killed: [335093] (in reverse order)
[2025-11-27 12:17:00] 2025-11-27 19:16:29,432 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:17:00] 2025-11-27 19:16:29,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:17:00] 2025-11-27 19:16:29,436 | INFO     | did not find any defunct processes belonging to 335093
[2025-11-27 12:17:00] 2025-11-27 19:16:29,439 | INFO     | did not find any defunct processes belonging to 335093
[2025-11-27 12:17:00] 2025-11-27 19:16:29,440 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:17:00] 2025-11-27 19:16:29,440 | INFO     | ready for new job
[2025-11-27 12:17:00] 2025-11-27 19:16:29,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:17:00] 2025-11-27 19:16:29,442 | INFO     | ***************************************
[2025-11-27 12:17:00] 2025-11-27 19:16:29,442 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:17:00] 2025-11-27 19:16:29,442 | INFO     | ***************************************
[2025-11-27 12:17:00] 2025-11-27 19:16:29,442 | INFO     | 
[2025-11-27 12:17:00] 2025-11-27 19:16:29,444 | INFO     | architecture information:
[2025-11-27 12:17:00] 2025-11-27 19:16:29,444 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:17:00] 2025-11-27 19:16:29,455 | INFO     | cat /etc/os-release:
[2025-11-27 12:17:00] NAME="CentOS Linux"
[2025-11-27 12:17:00] VERSION="7 (Core)"
[2025-11-27 12:17:00] ID="centos"
[2025-11-27 12:17:00] ID_LIKE="rhel fedora"
[2025-11-27 12:17:00] VERSION_ID="7"
[2025-11-27 12:17:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:17:00] ANSI_COLOR="0;31"
[2025-11-27 12:17:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:17:00] HOME_URL="https://www.centos.org/"
[2025-11-27 12:17:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:17:00] 
[2025-11-27 12:17:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:17:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:17:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:17:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:17:00] 
[2025-11-27 12:17:00] 2025-11-27 19:16:29,455 | INFO     | ***************************************
[2025-11-27 12:17:00] 2025-11-27 19:16:29,957 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-27 12:17:00] 2025-11-27 19:16:29,971 | INFO     | sufficient remaining disk space (379068612608 B)
[2025-11-27 12:17:00] 2025-11-27 19:16:29,971 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:17:00] 2025-11-27 19:16:29,972 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:17:00] 2025-11-27 19:16:29,972 | INFO     | update_server=False
[2025-11-27 12:17:00] 2025-11-27 19:16:29,972 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:17:00] 2025-11-27 19:16:29,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:17:00] 2025-11-27 19:16:29,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:17:00] 2025-11-27 19:16:30,128 | INFO     | all payload control threads have been joined
[2025-11-27 12:17:00] 2025-11-27 19:16:30,244 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 12:17:00] 2025-11-27 19:16:30,244 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 12:17:00] 2025-11-27 19:16:30,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:17:00] 2025-11-27 19:16:30,245 | INFO     | will abort loop
[2025-11-27 12:17:00] 2025-11-27 19:16:30,974 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:30,976 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:30,997 | INFO     | all data control threads have been joined
[2025-11-27 12:17:00] 2025-11-27 19:16:31,003 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:31,074 | INFO     | all job control threads have been joined
[2025-11-27 12:17:00] 2025-11-27 19:16:31,133 | INFO     | [payload] control thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:31,191 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:31,223 | INFO     | [job] validate thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:31,250 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:31,534 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:31,552 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:31,604 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:31,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:17:00] 2025-11-27 19:16:31,977 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:32,003 | INFO     | [data] control thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:32,078 | INFO     | [job] control thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:32,108 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:32,463 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:35,631 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:17:00] 2025-11-27 19:16:43,615 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:17:00] 2025-11-27 19:16:45,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139005014861632)>', '<ExcThread(monitor, started 139004200613632)>']
[2025-11-27 12:17:00] 2025-11-27 19:16:50,221 | INFO     | all workflow threads have been joined
[2025-11-27 12:17:00] 2025-11-27 19:16:50,221 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:17:00] 2025-11-27 19:16:50,222 | INFO     | traces error code: 0
[2025-11-27 12:17:00] 2025-11-27 19:16:50,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:17:00] 2025-11-27 19:17:00,484 | INFO     | PID=324196 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 12:17:00] 2025-11-27 19:17:00,485 | INFO     | .. there are 4 such processes running
[2025-11-27 12:17:00] 2025-11-27 19:17:00,485 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:17:00] 2025-11-27 19:17:00,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:17:00] 2025-11-27 19:17:00,485 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:17:00] 2025-11-27 19:17:00,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:17:00] 2025-11-27 19:17:00,485 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 12:17:00] 2025-11-27 19:17:00,486 | INFO     | [monitor] control thread has ended
[2025-11-27 12:17:00] 2025-11-27 19:17:00,564 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:17:00] 2025-11-27 19:17:00,566 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:17:00] 2025-11-27 19:17:00,568 [wrapper] pilotpid: 324196
[2025-11-27 12:17:00] 2025-11-27 19:17:00,570 [wrapper] Pilot exit status: 0
[2025-11-27 12:17:00] 2025-11-27 19:17:00,576 [wrapper] pandaids: 6891571199
[2025-11-27 12:17:00] 2025-11-27 19:17:00,609 [wrapper] cleanup supervisor_pilot  502232 324197
[2025-11-27 12:17:00] 2025-11-27 19:17:00,611 [wrapper] Test setup, not cleaning
[2025-11-27 12:17:00] 2025-11-27 19:17:00,613 [wrapper] apfmon messages muted
[2025-11-27 12:17:00] 2025-11-27 19:17:00,615 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:17:00] 2025-11-27 19:17:00,616 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:17:00]  *** Error codes and diagnostics ***
[2025-11-27 12:17:00]     "exeErrorCode": 0,
[2025-11-27 12:17:00]     "exeErrorDiag": "",
[2025-11-27 12:17:00]     "pilotErrorCode": 0,
[2025-11-27 12:17:00]     "pilotErrorDiag": "",
[2025-11-27 12:17:00]  *** Listing of results directory ***
[2025-11-27 12:17:00] total 1310404
[2025-11-27 12:17:00] -rw-r--r-- 1 boinc boinc      5112 Nov 18 08:45 queuedata.json
[2025-11-27 12:17:00] -rw-r--r-- 1 boinc boinc    576529 Nov 18 08:47 pilot3.tar.gz
[2025-11-27 12:17:00] -rwx------ 1 boinc boinc     36292 Nov 18 08:48 runpilot2-wrapper.sh
[2025-11-27 12:17:00] -rw-r--r-- 1 boinc boinc       100 Nov 27 06:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:17:00] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 06:36 run_atlas
[2025-11-27 12:17:00] -rw-r--r-- 1 boinc boinc       105 Nov 27 06:36 job.xml
[2025-11-27 12:17:00] -rw-r--r-- 2 boinc boinc 410189704 Nov 27 06:37 EVNT.47493065._000273.pool.root.1
[2025-11-27 12:17:00] -rw-r--r-- 1 boinc boinc      9772 Nov 27 06:37 init_data.xml
[2025-11-27 12:17:00] -rw-r--r-- 2 boinc boinc     15120 Nov 27 06:37 start_atlas.sh
[2025-11-27 12:17:00] drwxrwx--x 2 boinc boinc      4096 Nov 27 06:37 shared
[2025-11-27 12:17:00] -rw-r--r-- 2 boinc boinc    590095 Nov 27 06:37 input.tar.gz
[2025-11-27 12:17:00] -rw-r--r-- 1 boinc boinc         0 Nov 27 06:37 boinc_lockfile
[2025-11-27 12:17:00] -rw-r--r-- 1 boinc boinc      2773 Nov 27 06:37 pandaJob.out
[2025-11-27 12:17:00] -rw------- 1 boinc boinc    991588 Nov 27 06:37 agis_schedconf.cvmfs.json
[2025-11-27 12:17:00] drwx------ 5 boinc boinc      4096 Nov 27 06:37 pilot3
[2025-11-27 12:17:00] -rw-r--r-- 1 boinc boinc       533 Nov 27 12:10 boinc_task_state.xml
[2025-11-27 12:17:00] -rw------- 1 boinc boinc 918593158 Nov 27 12:15 HITS.47493068._002724.pool.root.1
[2025-11-27 12:17:00] -rw------- 1 boinc boinc      1037 Nov 27 12:16 memory_monitor_summary.json
[2025-11-27 12:17:00] -rw------- 1 boinc boinc   1516240 Nov 27 12:16 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:17:00] -rw------- 1 boinc boinc   1641949 Nov 27 12:16 log.47493068._002724.job.log.tgz.1
[2025-11-27 12:17:00] -rw------- 1 boinc boinc      8596 Nov 27 12:16 heartbeat.json
[2025-11-27 12:17:00] -rw-r--r-- 1 boinc boinc        29 Nov 27 12:16 wrapper_checkpoint.txt
[2025-11-27 12:17:00] -rw-r--r-- 1 boinc boinc      8192 Nov 27 12:16 boinc_mmap_file
[2025-11-27 12:17:00] -rw------- 1 boinc boinc        95 Nov 27 12:17 pilot_heartbeat.json
[2025-11-27 12:17:00] -rw------- 1 boinc boinc       891 Nov 27 12:17 pilotlog.txt
[2025-11-27 12:17:00] -rw------- 1 boinc boinc   2934310 Nov 27 12:17 log.47493068._002724.job.log.1
[2025-11-27 12:17:00] -rw------- 1 boinc boinc       353 Nov 27 12:17 output.list
[2025-11-27 12:17:00] -rw-r--r-- 1 boinc boinc       620 Nov 27 12:17 runtime_log
[2025-11-27 12:17:00] -rw------- 1 boinc boinc   4597760 Nov 27 12:17 result.tar.gz
[2025-11-27 12:17:00] -rw-r--r-- 1 boinc boinc      8840 Nov 27 12:17 runtime_log.err
[2025-11-27 12:17:00] -rw------- 1 boinc boinc       663 Nov 27 12:17 BKXLDmU7cf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEgFKDmIr1v7n.diag
[2025-11-27 12:17:00] -rw-r--r-- 1 boinc boinc     21384 Nov 27 12:17 stderr.txt
[2025-11-27 12:17:00] HITS file was successfully produced:
[2025-11-27 12:17:00] -rw------- 1 boinc boinc 918593158 Nov 27 12:15 shared/HITS.pool.root.1
[2025-11-27 12:17:00]  *** Contents of shared directory: ***
[2025-11-27 12:17:00] total 1302736
[2025-11-27 12:17:00] -rw-r--r-- 2 boinc boinc 410189704 Nov 27 06:37 ATLAS.root_0
[2025-11-27 12:17:00] -rw-r--r-- 2 boinc boinc     15120 Nov 27 06:37 start_atlas.sh
[2025-11-27 12:17:00] -rw-r--r-- 2 boinc boinc    590095 Nov 27 06:37 input.tar.gz
[2025-11-27 12:17:00] -rw------- 1 boinc boinc 918593158 Nov 27 12:15 HITS.pool.root.1
[2025-11-27 12:17:00] -rw------- 1 boinc boinc   4597760 Nov 27 12:17 result.tar.gz
12:17:02 (320315): run_atlas exited; CPU time 152237.122255
12:17:02 (320315): called boinc_finish(0)

</stderr_txt>
]]>

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