Stderr output

<core_client_version>8.2.7</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-27 03:47:19 (25620): vboxwrapper version 26210
2025-11-27 03:47:19 (25620): BOINC client version: 8.2.7
2025-11-27 03:47:19 (25620): Detected: VirtualBox VboxManage Interface (Version: 7.2.0)
2025-11-27 03:47:19 (25620): Successfully copied 'init_data.xml' to the shared directory.
2025-11-27 03:47:20 (25620): Create VM. (boinc_83c055879dfc49cd, slot#8)
2025-11-27 03:47:20 (25620): Setting Memory Size for VM. (4400MB)
2025-11-27 03:47:21 (25620): Setting CPU Count for VM. (4)
2025-11-27 03:47:22 (25620): Setting Chipset Options for VM.
2025-11-27 03:47:22 (25620): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-27 03:47:22 (25620): Setting Boot Options for VM.
2025-11-27 03:47:23 (25620): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-27 03:47:23 (25620): Enabling VM Network Access.
2025-11-27 03:47:23 (25620): Disabling USB Support for VM.
2025-11-27 03:47:23 (25620): Disabling COM Port Support for VM.
2025-11-27 03:47:24 (25620): Disabling LPT Port Support for VM.
2025-11-27 03:47:24 (25620): Disabling Audio Support for VM.
2025-11-27 03:47:24 (25620): Disabling Clipboard Support for VM.
2025-11-27 03:47:24 (25620): Disabling Drag and Drop Support for VM.
2025-11-27 03:47:25 (25620): Adding storage controller(s) to VM.
2025-11-27 03:47:25 (25620): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-27 03:47:25 (25620): Adding VirtualBox Guest Additions to VM.
2025-11-27 03:47:26 (25620): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-27 03:47:26 (25620): forwarding host port 61165 to guest port 80
2025-11-27 03:47:26 (25620): Enabling remote desktop for VM.
2025-11-27 03:47:27 (25620): Enabling shared directory for VM.
2025-11-27 03:47:28 (25620): Starting VM using VBoxManage interface. (boinc_83c055879dfc49cd, slot#8)
2025-11-27 03:47:33 (25620): Successfully started VM. (PID = '23112')
2025-11-27 03:47:33 (25620): Reporting VM Process ID to BOINC.
2025-11-27 03:47:33 (25620): Guest Log: BIOS: VirtualBox 7.2.0
2025-11-27 03:47:33 (25620): Guest Log: CPUID EDX: 0x178bfbff
2025-11-27 03:47:33 (25620): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-27 03:47:33 (25620): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-27 03:47:33 (25620): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-27 03:47:33 (25620): Detected: Web Application Enabled (http://localhost:61165)
2025-11-27 03:47:33 (25620): Detected: Remote Desktop Enabled (localhost:61177)
2025-11-27 03:47:33 (25620): Preference change detected
2025-11-27 03:47:33 (25620): Setting CPU throttle for VM. (100%)
2025-11-27 03:47:33 (25620): Setting checkpoint interval to 1800 seconds. (Higher value of (Preference: 1800 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-27 03:47:35 (25620): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-27 03:47:35 (25620): Guest Log: BIOS: Booting from Hard Disk...
2025-11-27 03:47:38 (25620): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-27 03:47:38 (25620): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-27 03:47:38 (25620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-27 03:47:46 (25620): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-27 03:47:46 (25620): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-27 03:48:00 (25620): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-27 03:48:00 (25620): Guest Log: 00:00:00.000138 main     Log opened 2025-11-27T03:47:57.596592000Z
2025-11-27 03:48:00 (25620): Guest Log: 00:00:00.000216 main     OS Product: Linux
2025-11-27 03:48:00 (25620): Guest Log: 00:00:00.000238 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-27 03:48:00 (25620): Guest Log: 00:00:00.000255 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-27 03:48:00 (25620): Guest Log: 00:00:00.000272 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-27 03:48:00 (25620): Guest Log: 00:00:00.000272 main     Process ID: 1310
2025-11-27 03:48:00 (25620): Guest Log: 00:00:00.000272 main     Package type: LINUX_64BITS_GENERIC
2025-11-27 03:48:00 (25620): Guest Log: 00:00:00.001153 main     5.2.32 r132073 started. Verbose level = 0
2025-11-27 03:48:01 (25620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-27 03:48:01 (25620): Guest Log: [INFO] Mounting shared directory
2025-11-27 03:48:01 (25620): Guest Log: [INFO] Checking for init_data.xml
2025-11-27 03:48:06 (25620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-27 03:48:06 (25620): Guest Log: [INFO] Detected branch: prod
2025-11-27 03:48:07 (25620): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-27 03:48:07 (25620): Guest Log: Copying input files
2025-11-27 03:48:10 (25620): Guest Log: 00:00:10.003582 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 012 182 643 000ns (GuestNow=1 764 233 289 781 817 000 ns GuestLast=1 764 215 277 599 174 000 ns fSetTimeLastLoop=true )
2025-11-27 03:48:11 (25620): Guest Log: Copied input files into RunAtlas.
2025-11-27 03:48:11 (25620): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-27 03:48:11 (25620): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-27 03:48:11 (25620): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-27 03:48:11 (25620): Guest Log: Further information can be found at the LHC@home message board.
2025-11-27 03:48:26 (25620): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-27 03:48:27 (25620): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-27 03:48:27 (25620): Guest Log: 2.6.3.0 1607 0 32020 153357 4 1 3117639 4096000 0 65024 0 0 n/a 1 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-27 03:48:29 (25620): Guest Log: copied the webapp to /var/www
2025-11-27 03:48:29 (25620): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-27 03:48:29 (25620): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-27 03:48:29 (25620): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-27 03:48:29 (25620): Guest Log:  *** Starting ATLAS job. (PandaID=6895380001 taskID=47556137) ***
2025-11-27 05:27:35 (25620): Status Report: Elapsed Time: '6000.000000'
2025-11-27 05:27:35 (25620): Status Report: CPU Time: '20695.921875'
2025-11-27 07:07:41 (25620): Status Report: Elapsed Time: '12000.000000'
2025-11-27 07:07:41 (25620): Status Report: CPU Time: '44419.437500'
2025-11-27 08:47:43 (25620): Status Report: Elapsed Time: '18000.000000'
2025-11-27 08:47:43 (25620): Status Report: CPU Time: '68165.468750'
2025-11-27 10:27:46 (25620): Status Report: Elapsed Time: '24000.000000'
2025-11-27 10:27:46 (25620): Status Report: CPU Time: '91865.015625'
2025-11-27 12:07:49 (25620): Status Report: Elapsed Time: '30000.000000'
2025-11-27 12:07:49 (25620): Status Report: CPU Time: '115574.875000'
2025-11-27 13:47:52 (25620): Status Report: Elapsed Time: '36000.000000'
2025-11-27 13:47:52 (25620): Status Report: CPU Time: '139316.625000'
2025-11-27 13:48:48 (25620): VM state change detected. (old = 'running', new = 'paused')
2025-11-27 15:08:25 (25620): Guest Log: 10:00:33.357092 timesync vgsvcTimeSyncWorker: Radical host time change: 4 780 275 000 000ns (HostNow=1 764 274 056 573 000 000 ns HostLast=1 764 269 276 298 000 000 ns)
2025-11-27 15:08:25 (25620): VM state change detected. (old = 'paused', new = 'running')
2025-11-27 15:08:35 (25620): Guest Log: 10:00:43.367521 timesync vgsvcTimeSyncWorker: Radical guest time change: 4 753 448 282 000ns (GuestNow=1 764 274 066 583 531 000 ns GuestLast=1 764 269 313 135 249 000 ns fSetTimeLastLoop=true )
2025-11-27 16:47:33 (25620): Status Report: Elapsed Time: '42000.000000'
2025-11-27 16:47:33 (25620): Status Report: CPU Time: '162976.015625'
2025-11-27 18:27:36 (25620): Status Report: Elapsed Time: '48000.000000'
2025-11-27 18:27:36 (25620): Status Report: CPU Time: '186573.812500'
2025-11-27 20:07:38 (25620): Status Report: Elapsed Time: '54000.000000'
2025-11-27 20:07:38 (25620): Status Report: CPU Time: '210227.093750'
2025-11-27 21:26:43 (25620): Guest Log:  *** Job finished ***
2025-11-27 21:26:43 (25620): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:41,892 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:41,893 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:53,074 | INFO     | [monitor] cgroup control has ended
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:53,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140088860923712)>', '<ExcThread(monitor, started 140088201701120)>']
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:54,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:54,089 | INFO     | [monitor] control thread has ended
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:58,285 | INFO     | all workflow threads have been joined
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:58,286 | INFO     | end of generic workflow (traces error code: 0)
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:58,286 | INFO     | traces error code: 0
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:58,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:58,601 [wrapper] ==== pilot stdout END ====
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:58,606 [wrapper] ==== wrapper stdout RESUME ====
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:58,611 [wrapper] pilotpid: 6002
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:58,618 [wrapper] Pilot exit status: 0
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:58,663 [wrapper] pandaids: 6895380001
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:58,694 [wrapper] cleanup supervisor_pilot 24887 6003
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:58,700 [wrapper] Test setup, not cleaning
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:58,705 [wrapper] apfmon messages muted
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:58,710 [wrapper] ==== wrapper stdout END ====
2025-11-27 21:26:43 (25620): Guest Log: 2025-11-28 02:25:58,714 [wrapper] ==== wrapper stderr END ====
2025-11-27 21:26:43 (25620): Guest Log:  *** Error codes and diagnostics ***
2025-11-27 21:26:43 (25620): Guest Log:     "exeErrorCode": 0,
2025-11-27 21:26:43 (25620): Guest Log:     "exeErrorDiag": "",
2025-11-27 21:26:43 (25620): Guest Log:     "pilotErrorCode": 0,
2025-11-27 21:26:43 (25620): Guest Log:     "pilotErrorDiag": "",
2025-11-27 21:26:43 (25620): Guest Log:  *** Listing of results directory ***
2025-11-27 21:26:43 (25620): Guest Log: total 915788
2025-11-27 21:26:43 (25620): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 24 02:30 pilot3.tar.gz
2025-11-27 21:26:43 (25620): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 24 02:33 runpilot2-wrapper.sh
2025-11-27 21:26:43 (25620): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 24 02:33 queuedata.json
2025-11-27 21:26:43 (25620): Guest Log: -rwxr-xr-x. 1 atlas atlas      8486 Nov 27 08:48 init_data.xml
2025-11-27 21:26:43 (25620): Guest Log: -rwxr-xr-x. 1 atlas atlas    590106 Nov 27 08:48 input.tar.gz
2025-11-27 21:26:43 (25620): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 27 08:48 start_atlas.sh
2025-11-27 21:26:43 (25620): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 27 08:48 EVNT.47483658._000983.pool.root.1 -> /data/./ATLAS.root_0
2025-11-27 21:26:43 (25620): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 27 08:48 pandaJob.out
2025-11-27 21:26:43 (25620): Guest Log: -rw-------. 1 atlas atlas    991573 Nov 27 08:49 agis_schedconf.cvmfs.json
2025-11-27 21:26:43 (25620): Guest Log: drwx------. 5 atlas atlas      4096 Nov 27 08:49 pilot3
2025-11-27 21:26:43 (25620): Guest Log: -rw-------. 1 atlas atlas 914975932 Nov 28 02:24 HITS.47556137._009694.pool.root.1
2025-11-27 21:26:43 (25620): Guest Log: -rw-------. 1 atlas atlas      1038 Nov 28 02:24 memory_monitor_summary.json
2025-11-27 21:26:43 (25620): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 28 02:24 agis_ddmendpoints.agis.ALL.json
2025-11-27 21:26:43 (25620): Guest Log: -rw-------. 1 atlas atlas   1682477 Nov 28 02:24 log.47556137._009694.job.log.tgz.1
2025-11-27 21:26:43 (25620): Guest Log: -rw-------. 1 atlas atlas      8634 Nov 28 02:25 heartbeat.json
2025-11-27 21:26:43 (25620): Guest Log: -rw-------. 1 atlas atlas        97 Nov 28 02:25 pilot_heartbeat.json
2025-11-27 21:26:43 (25620): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 28 02:25 pilotlog.txt
2025-11-27 21:26:43 (25620): Guest Log: -rw-------. 1 atlas atlas   7789632 Nov 28 02:25 log.47556137._009694.job.log.1
2025-11-27 21:26:43 (25620): Guest Log: -rw-------. 1 atlas atlas       353 Nov 28 02:25 output.list
2025-11-27 21:26:43 (25620): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 28 02:25 runtime_log
2025-11-27 21:26:43 (25620): Guest Log: -rw-------. 1 atlas atlas   9492480 Nov 28 02:25 result.tar.gz
2025-11-27 21:26:43 (25620): Guest Log: -rw-r--r--. 1 atlas atlas      8744 Nov 28 02:25 runtime_log.err
2025-11-27 21:26:43 (25620): Guest Log: -rw-------. 1 atlas atlas       660 Nov 28 02:25 qgcLDm2Zbh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqsIKDmzBEZvn.diag
2025-11-27 21:26:43 (25620): Guest Log: Looking for outputfile HITS.47556137._009694.pool.root.1
2025-11-27 21:26:43 (25620): Guest Log: HITS file was successfully produced
2025-11-27 21:26:43 (25620): Guest Log: -rw-------. 1 atlas atlas 914975932 Nov 28 02:24 /home/atlas/RunAtlas/HITS.47556137._009694.pool.root.1
2025-11-27 21:26:52 (25620): Guest Log: Successfully finished the ATLAS job!
2025-11-27 21:26:52 (25620): Guest Log: Copying the results back to the shared directory!
2025-11-27 21:26:53 (25620): Guest Log:  *** Contents of shared directory: ***
2025-11-27 21:26:53 (25620): Guest Log: total 1303004
2025-11-27 21:26:53 (25620): Guest Log: -rwxrwxrwx. 1 root root 409180073 Nov 27 08:47 ATLAS.root_0
2025-11-27 21:26:53 (25620): Guest Log: -rwxrwxrwx. 1 root root 914975932 Nov 28  2025 HITS.pool.root.1
2025-11-27 21:26:53 (25620): Guest Log: -rwxrwxrwx. 1 root root      8486 Nov 27 08:47 init_data.xml
2025-11-27 21:26:53 (25620): Guest Log: -rwxrwxrwx. 1 root root    590106 Nov 27 08:09 input.tar.gz
2025-11-27 21:26:53 (25620): Guest Log: -rwxrwxrwx. 1 root root   9492480 Nov 28  2025 result.tar.gz
2025-11-27 21:26:53 (25620): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 27 08:09 start_atlas.sh
2025-11-27 21:26:53 (25620): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-27 21:26:53 (25620): VM Completion File Detected.
2025-11-27 21:26:53 (25620): Powering off VM.
2025-11-27 21:26:55 (25620): Successfully stopped VM.
2025-11-27 21:26:55 (25620): Deregistering VM. (boinc_83c055879dfc49cd, slot#8)
2025-11-27 21:26:55 (25620): Removing network bandwidth throttle group from VM.
2025-11-27 21:26:55 (25620): Removing VM from VirtualBox.
2025-11-27 21:27:12 (25620): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN