Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:46:25 (3591): wrapper (7.7.26015): starting
03:46:25 (3591): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 03:46:25] Arguments: --nthreads 12
[2025-11-27 03:46:25] Threads: 12
[2025-11-27 03:46:25] Checking for CVMFS
[2025-11-27 03:46:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 03:46:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 03:46:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 03:46:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 03:46:26] 2.11.2.0 30551 118841 92364 153357 3 1 20027681 20275200 1 130560 0 52776940 99.918 6445046 29063 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 03:46:26] CVMFS is ok
[2025-11-27 03:46:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 03:46:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 03:46:26] Further information can be found at the LHC@home message board.
[2025-11-27 03:46:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 03:46:26] Checking for apptainer binary...
[2025-11-27 03:46:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 03:46:26] Running /usr/bin/apptainer --version
[2025-11-27 03:46:26] apptainer version 1.3.2-1.el7
[2025-11-27 03:46:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 03:46:27] c-205-16.aglt2.org
[2025-11-27 03:46:27] apptainer works
[2025-11-27 03:46:27] Set ATHENA_PROC_NUMBER=12
[2025-11-27 03:46:27] Set ATHENA_CORE_NUMBER=12
[2025-11-27 03:46:27] Starting ATLAS job with PandaID=6892523392
[2025-11-27 03:46:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 11:04:31]  *** The last 200 lines of the pilot log: ***
[2025-11-27 11:04:31] 2025-11-27 16:03:39,232 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 11:04:31] 2025-11-27 16:03:39,233 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 11:04:31] 2025-11-27 16:03:39,239 | INFO     | fitting pss+swap vs Time
[2025-11-27 11:04:31] 2025-11-27 16:03:39,240 | INFO     | sum of square deviations: 24653605532.707024
[2025-11-27 11:04:31] 2025-11-27 16:03:39,244 | INFO     | sum of deviations: 303942638062.4322
[2025-11-27 11:04:31] 2025-11-27 16:03:39,244 | INFO     | mean x: 1764246316.7302325
[2025-11-27 11:04:31] 2025-11-27 16:03:39,244 | INFO     | mean y: 3412676.8744186047
[2025-11-27 11:04:31] 2025-11-27 16:03:39,244 | INFO     | intersect: -21747145430.641342
[2025-11-27 11:04:31] 2025-11-27 16:03:39,244 | INFO     | chi2: 6.812574650638288
[2025-11-27 11:04:31] 2025-11-27 16:03:39,245 | INFO     | sum of square deviations: 23803582579.93885
[2025-11-27 11:04:31] 2025-11-27 16:03:39,249 | INFO     | sum of deviations: 472581362794.4209
[2025-11-27 11:04:31] 2025-11-27 16:03:39,249 | INFO     | mean x: 1764246164.2329412
[2025-11-27 11:04:31] 2025-11-27 16:03:39,249 | INFO     | mean y: 3442902.1270588236
[2025-11-27 11:04:31] 2025-11-27 16:03:39,249 | INFO     | intersect: -35022791228.72598
[2025-11-27 11:04:31] 2025-11-27 16:03:39,250 | INFO     | chi2: 3.6192198364407515
[2025-11-27 11:04:31] 2025-11-27 16:03:39,250 | INFO     | current chi2=3.6192198364407515 (change=46.874419407622085 %)
[2025-11-27 11:04:31] 2025-11-27 16:03:39,250 | INFO     | sum of square deviations: 22973327439.66425
[2025-11-27 11:04:31] 2025-11-27 16:03:39,254 | INFO     | sum of deviations: 569014580647.2068
[2025-11-27 11:04:31] 2025-11-27 16:03:39,254 | INFO     | mean x: 1764246011.7357142
[2025-11-27 11:04:31] 2025-11-27 16:03:39,254 | INFO     | mean y: 3460599.3261904763
[2025-11-27 11:04:31] 2025-11-27 16:03:39,254 | INFO     | intersect: -43694245236.40172
[2025-11-27 11:04:31] 2025-11-27 16:03:39,255 | INFO     | chi2: 2.4682823160038554
[2025-11-27 11:04:31] 2025-11-27 16:03:39,255 | INFO     | current chi2=2.4682823160038554 (change=31.800707678723445 %)
[2025-11-27 11:04:31] 2025-11-27 16:03:39,256 | INFO     | sum of square deviations: 22162556430.327698
[2025-11-27 11:04:31] 2025-11-27 16:03:39,259 | INFO     | sum of deviations: 575457067604.8333
[2025-11-27 11:04:31] 2025-11-27 16:03:39,259 | INFO     | mean x: 1764245859.2337348
[2025-11-27 11:04:31] 2025-11-27 16:03:39,259 | INFO     | mean y: 3461781.1975903613
[2025-11-27 11:04:31] 2025-11-27 16:03:39,260 | INFO     | intersect: -45805682659.347565
[2025-11-27 11:04:31] 2025-11-27 16:03:39,260 | INFO     | chi2: 2.3519819411109815
[2025-11-27 11:04:31] 2025-11-27 16:03:39,260 | INFO     | current chi2=2.3519819411109815 (change=4.7117938713414285 %)
[2025-11-27 11:04:31] 2025-11-27 16:03:39,260 | INFO     | right removable region: 414
[2025-11-27 11:04:31] 2025-11-27 16:03:39,261 | INFO     | sum of square deviations: 23803548297.402348
[2025-11-27 11:04:31] 2025-11-27 16:03:39,265 | INFO     | sum of deviations: 171697737973.86838
[2025-11-27 11:04:31] 2025-11-27 16:03:39,265 | INFO     | mean x: 1764246469.2305882
[2025-11-27 11:04:31] 2025-11-27 16:03:39,265 | INFO     | mean y: 3436317.2870588237
[2025-11-27 11:04:31] 2025-11-27 16:03:39,265 | INFO     | intersect: -12722276849.952507
[2025-11-27 11:04:31] 2025-11-27 16:03:39,266 | INFO     | chi2: 4.625266008525328
[2025-11-27 11:04:31] 2025-11-27 16:03:39,266 | INFO     | current chi2=4.625266008525328 (change=32.10693099572898 %)
[2025-11-27 11:04:31] 2025-11-27 16:03:39,266 | INFO     | sum of square deviations: 22973233072.133274
[2025-11-27 11:04:31] 2025-11-27 16:03:39,270 | INFO     | sum of deviations: 139128972078.19995
[2025-11-27 11:04:31] 2025-11-27 16:03:39,270 | INFO     | mean x: 1764246621.7333333
[2025-11-27 11:04:31] 2025-11-27 16:03:39,270 | INFO     | mean y: 3442292.492857143
[2025-11-27 11:04:31] 2025-11-27 16:03:39,270 | INFO     | intersect: -10681071210.830187
[2025-11-27 11:04:31] 2025-11-27 16:03:39,271 | INFO     | chi2: 4.567168779912158
[2025-11-27 11:04:31] 2025-11-27 16:03:39,271 | INFO     | current chi2=4.567168779912158 (change=1.2560840502164623 %)
[2025-11-27 11:04:31] 2025-11-27 16:03:39,271 | INFO     | left removable region: 20
[2025-11-27 11:04:31] 2025-11-27 16:03:39,272 | INFO     | sum of square deviations: 18965469292.54833
[2025-11-27 11:04:31] 2025-11-27 16:03:39,275 | INFO     | sum of deviations: 367696681417.772
[2025-11-27 11:04:31] 2025-11-27 16:03:39,275 | INFO     | mean x: 1764246438.7360406
[2025-11-27 11:04:31] 2025-11-27 16:03:39,275 | INFO     | mean y: 3501498.276649746
[2025-11-27 11:04:31] 2025-11-27 16:03:39,276 | INFO     | intersect: -34201165453.00447
[2025-11-27 11:04:31] 2025-11-27 16:03:39,276 | INFO     | chi2: 0.05311473383290222
[2025-11-27 11:04:31] 2025-11-27 16:03:39,276 | INFO     | current memory leak: 19.39 B/s (using 394 data points, chi2=0.05)
[2025-11-27 11:04:31] 2025-11-27 16:03:39,276 | INFO     | could have reported an average CPU frequency of 2415 MHz (18 samples)
[2025-11-27 11:04:31] 2025-11-27 16:03:39,277 | INFO     | ..............................
[2025-11-27 11:04:31] 2025-11-27 16:03:39,277 | INFO     | . Timing measurements:
[2025-11-27 11:04:31] 2025-11-27 16:03:39,277 | INFO     | . get job = 0 s
[2025-11-27 11:04:31] 2025-11-27 16:03:39,277 | INFO     | . initial setup = 2 s
[2025-11-27 11:04:31] 2025-11-27 16:03:39,277 | INFO     | . payload setup = 7 s
[2025-11-27 11:04:31] 2025-11-27 16:03:39,277 | INFO     | . stage-in = 0 s
[2025-11-27 11:04:31] 2025-11-27 16:03:39,277 | INFO     | . payload execution = 26180 s
[2025-11-27 11:04:31] 2025-11-27 16:03:39,277 | INFO     | . stage-out = 3 s
[2025-11-27 11:04:31] 2025-11-27 16:03:39,277 | INFO     | . log creation = 0 s
[2025-11-27 11:04:31] 2025-11-27 16:03:39,278 | INFO     | ..............................
[2025-11-27 11:04:31] 2025-11-27 16:03:39,661 | INFO     | 
[2025-11-27 11:04:31] 2025-11-27 16:03:39,662 | INFO     | job summary report
[2025-11-27 11:04:31] 2025-11-27 16:03:39,662 | INFO     | --------------------------------------------------
[2025-11-27 11:04:31] 2025-11-27 16:03:39,662 | INFO     | PanDA job id: 6892523392
[2025-11-27 11:04:31] 2025-11-27 16:03:39,662 | INFO     | task id: 47493029
[2025-11-27 11:04:31] 2025-11-27 16:03:39,662 | INFO     | errors: (none)
[2025-11-27 11:04:31] 2025-11-27 16:03:39,664 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 11:04:31] 2025-11-27 16:03:39,665 | INFO     | pilot state: finished 
[2025-11-27 11:04:31] 2025-11-27 16:03:39,665 | INFO     | transexitcode: 0
[2025-11-27 11:04:31] 2025-11-27 16:03:39,665 | INFO     | exeerrorcode: 0
[2025-11-27 11:04:31] 2025-11-27 16:03:39,665 | INFO     | exeerrordiag: 
[2025-11-27 11:04:31] 2025-11-27 16:03:39,665 | INFO     | exitcode: 0
[2025-11-27 11:04:31] 2025-11-27 16:03:39,666 | INFO     | exitmsg: OK
[2025-11-27 11:04:31] 2025-11-27 16:03:39,666 | INFO     | cpuconsumptiontime: 298015 s
[2025-11-27 11:04:31] 2025-11-27 16:03:39,666 | INFO     | nevents: 1000
[2025-11-27 11:04:31] 2025-11-27 16:03:39,666 | INFO     | neventsw: 0
[2025-11-27 11:04:31] 2025-11-27 16:03:39,666 | INFO     | pid: 13833
[2025-11-27 11:04:31] 2025-11-27 16:03:39,666 | INFO     | pgrp: 13833
[2025-11-27 11:04:31] 2025-11-27 16:03:39,667 | INFO     | corecount: 12
[2025-11-27 11:04:31] 2025-11-27 16:03:39,667 | INFO     | event service: False
[2025-11-27 11:04:31] 2025-11-27 16:03:39,667 | INFO     | sizes: {0: 2284300, 1: 2284300, 5: 2284590, 11: 2284646, 26191: 2322039, 26192: 2322038, 26195: 2331272, 26200: 2331462}
[2025-11-27 11:04:31] 2025-11-27 16:03:39,667 | INFO     | --------------------------------------------------
[2025-11-27 11:04:31] 2025-11-27 16:03:39,667 | INFO     | 
[2025-11-27 11:04:31] 2025-11-27 16:03:39,668 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 11:04:31] 2025-11-27 16:03:39,694 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,694 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,694 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,694 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,695 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,695 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,695 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,695 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,695 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,695 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,696 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,696 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,696 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,696 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,696 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,697 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 11:04:31] 2025-11-27 16:03:39,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,697 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 11:04:31] 2025-11-27 16:03:39,697 | INFO     | job 6892523392 has completed (purged errors)
[2025-11-27 11:04:31] 2025-11-27 16:03:39,698 | INFO     | overall cleanup function is called
[2025-11-27 11:04:31] 2025-11-27 16:03:40,714 | INFO     | --- collectZombieJob: --- 10, [13833]
[2025-11-27 11:04:31] 2025-11-27 16:03:40,714 | INFO     | zombie collector waiting for pid 13833
[2025-11-27 11:04:31] 2025-11-27 16:03:40,714 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 11:04:31] 2025-11-27 16:03:40,715 | INFO     | collected zombie processes
[2025-11-27 11:04:31] 2025-11-27 16:03:40,715 | INFO     | will attempt to kill all subprocesses of pid=13833
[2025-11-27 11:04:31] 2025-11-27 16:03:40,809 | INFO     | process IDs to be killed: [13833] (in reverse order)
[2025-11-27 11:04:31] 2025-11-27 16:03:40,860 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 11:04:31] 2025-11-27 16:03:40,860 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 11:04:31] 2025-11-27 16:03:40,864 | INFO     | did not find any defunct processes belonging to 13833
[2025-11-27 11:04:31] 2025-11-27 16:03:40,866 | INFO     | did not find any defunct processes belonging to 13833
[2025-11-27 11:04:31] 2025-11-27 16:03:40,868 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 11:04:31] 2025-11-27 16:03:40,868 | INFO     | ready for new job
[2025-11-27 11:04:31] 2025-11-27 16:03:40,868 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 11:04:31] 2025-11-27 16:03:40,870 | INFO     | ***************************************
[2025-11-27 11:04:31] 2025-11-27 16:03:40,870 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 11:04:31] 2025-11-27 16:03:40,871 | INFO     | ***************************************
[2025-11-27 11:04:31] 2025-11-27 16:03:40,871 | INFO     | 
[2025-11-27 11:04:31] 2025-11-27 16:03:40,871 | INFO     | architecture information:
[2025-11-27 11:04:31] 2025-11-27 16:03:40,872 | INFO     | executing command: cat /etc/os-release
[2025-11-27 11:04:31] 2025-11-27 16:03:40,887 | INFO     | cat /etc/os-release:
[2025-11-27 11:04:31] NAME="CentOS Linux"
[2025-11-27 11:04:31] VERSION="7 (Core)"
[2025-11-27 11:04:31] ID="centos"
[2025-11-27 11:04:31] ID_LIKE="rhel fedora"
[2025-11-27 11:04:31] VERSION_ID="7"
[2025-11-27 11:04:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 11:04:31] ANSI_COLOR="0;31"
[2025-11-27 11:04:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 11:04:31] HOME_URL="https://www.centos.org/"
[2025-11-27 11:04:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 11:04:31] 
[2025-11-27 11:04:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 11:04:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 11:04:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 11:04:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 11:04:31] 
[2025-11-27 11:04:31] 2025-11-27 16:03:40,887 | INFO     | ***************************************
[2025-11-27 11:04:31] 2025-11-27 16:03:41,390 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 11:04:31] 2025-11-27 16:03:41,406 | INFO     | sufficient remaining disk space (28387049472 B)
[2025-11-27 11:04:31] 2025-11-27 16:03:41,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 11:04:31] 2025-11-27 16:03:41,407 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 11:04:31] 2025-11-27 16:03:41,407 | INFO     | update_server=False
[2025-11-27 11:04:31] 2025-11-27 16:03:41,407 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 11:04:31] 2025-11-27 16:03:41,813 | INFO     | all job control threads have been joined
[2025-11-27 11:04:31] 2025-11-27 16:03:41,937 | INFO     | all data control threads have been joined
[2025-11-27 11:04:31] 2025-11-27 16:03:42,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 11:04:31] 2025-11-27 16:03:42,241 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:04:31] 2025-11-27 16:03:42,241 | INFO     | aborting loop
[2025-11-27 11:04:31] 2025-11-27 16:03:42,401 | INFO     | all payload control threads have been joined
[2025-11-27 11:04:31] 2025-11-27 16:03:42,413 | INFO     | [job] retrieve thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:42,653 | INFO     | [payload] validate_post thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:42,667 | INFO     | [data] copytool_in thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:42,818 | INFO     | [job] control thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:42,942 | INFO     | [data] control thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:42,996 | INFO     | [payload] failed_post thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:43,124 | INFO     | [job] validate thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:43,243 | INFO     | [job] job monitor thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:43,390 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:43,407 | INFO     | [payload] control thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:43,434 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:43,591 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:44,091 | INFO     | [data] copytool_out thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:44,367 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:04:31] 2025-11-27 16:03:44,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 11:04:31] 2025-11-27 16:03:45,373 | INFO     | [job] queue monitor thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:48,758 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:03:52,332 | INFO     | job.realtimelogging is not enabled
[2025-11-27 11:04:31] 2025-11-27 16:03:53,337 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 11:04:31] 2025-11-27 16:04:10,950 | INFO     | PID=7320 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 11:04:31] 2025-11-27 16:04:10,951 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 11:04:31] 2025-11-27 16:04:10,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 11:04:31] 2025-11-27 16:04:10,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 11:04:31] 2025-11-27 16:04:25,139 | INFO     | [monitor] cgroup control has ended
[2025-11-27 11:04:31] 2025-11-27 16:04:26,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140429560612672)>', '<ExcThread(monitor, started 140428812723968)>']
[2025-11-27 11:04:31] 2025-11-27 16:04:27,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 11:04:31] 2025-11-27 16:04:27,022 | INFO     | [monitor] control thread has ended
[2025-11-27 11:04:31] 2025-11-27 16:04:31,456 | INFO     | all workflow threads have been joined
[2025-11-27 11:04:31] 2025-11-27 16:04:31,456 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 11:04:31] 2025-11-27 16:04:31,456 | INFO     | traces error code: 0
[2025-11-27 11:04:31] 2025-11-27 16:04:31,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 11:04:31] 2025-11-27 16:04:31,550 [wrapper] ==== pilot stdout END ====
[2025-11-27 11:04:31] 2025-11-27 16:04:31,554 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 11:04:31] 2025-11-27 16:04:31,558 [wrapper] pilotpid: 7320
[2025-11-27 11:04:31] 2025-11-27 16:04:31,561 [wrapper] Pilot exit status: 0
[2025-11-27 11:04:31] 2025-11-27 16:04:31,573 [wrapper] pandaids: 6892523392
[2025-11-27 11:04:31] 2025-11-27 16:04:31,622 [wrapper] cleanup supervisor_pilot 10024 7321
[2025-11-27 11:04:31] 2025-11-27 16:04:31,626 [wrapper] Test setup, not cleaning
[2025-11-27 11:04:31] 2025-11-27 16:04:31,630 [wrapper] apfmon messages muted
[2025-11-27 11:04:31] 2025-11-27 16:04:31,634 [wrapper] ==== wrapper stdout END ====
[2025-11-27 11:04:31] 2025-11-27 16:04:31,637 [wrapper] ==== wrapper stderr END ====
[2025-11-27 11:04:31]  *** Error codes and diagnostics ***
[2025-11-27 11:04:31]     "exeErrorCode": 0,
[2025-11-27 11:04:31]     "exeErrorDiag": "",
[2025-11-27 11:04:31]     "pilotErrorCode": 0,
[2025-11-27 11:04:31]     "pilotErrorDiag": "",
[2025-11-27 11:04:31]  *** Listing of results directory ***
[2025-11-27 11:04:31] total 1311348
[2025-11-27 11:04:31] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 02:00 pilot3.tar.gz
[2025-11-27 11:04:31] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 02:07 queuedata.json
[2025-11-27 11:04:31] -rwx------ 1 boincer umatlas     36292 Nov 19 02:07 runpilot2-wrapper.sh
[2025-11-27 11:04:31] -rw-r--r-- 1 boincer umatlas       100 Nov 27 03:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 11:04:31] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 03:46 run_atlas
[2025-11-27 11:04:31] -rw-r--r-- 1 boincer umatlas       105 Nov 27 03:46 job.xml
[2025-11-27 11:04:31] -rw-r--r-- 2 boincer umatlas 410265236 Nov 27 03:46 EVNT.47493027._000076.pool.root.1
[2025-11-27 11:04:31] -rw-r--r-- 2 boincer umatlas     15120 Nov 27 03:46 start_atlas.sh
[2025-11-27 11:04:31] drwxrwx--x 2 boincer umatlas      4096 Nov 27 03:46 shared
[2025-11-27 11:04:31] -rw-r--r-- 2 boincer umatlas    590101 Nov 27 03:46 input.tar.gz
[2025-11-27 11:04:31] -rw-r--r-- 1 boincer umatlas         0 Nov 27 03:46 boinc_lockfile
[2025-11-27 11:04:31] -rw-r--r-- 1 boincer umatlas      2771 Nov 27 03:46 pandaJob.out
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas    991573 Nov 27 03:46 agis_schedconf.cvmfs.json
[2025-11-27 11:04:31] drwx------ 5 boincer umatlas      4096 Nov 27 03:46 pilot3
[2025-11-27 11:04:31] -rw-r--r-- 1 boincer umatlas       532 Nov 27 10:51 boinc_task_state.xml
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas 916960562 Nov 27 11:02 HITS.47493029._000714.pool.root.1
[2025-11-27 11:04:31] -rw-r--r-- 1 boincer umatlas      5956 Nov 27 11:03 init_data.xml
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas      1064 Nov 27 11:03 memory_monitor_summary.json
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas   1516240 Nov 27 11:03 agis_ddmendpoints.agis.ALL.json
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas   2172297 Nov 27 11:03 log.47493029._000714.job.log.tgz.1
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas      8664 Nov 27 11:03 heartbeat.json
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas        95 Nov 27 11:04 pilot_heartbeat.json
[2025-11-27 11:04:31] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 11:04 boinc_mmap_file
[2025-11-27 11:04:31] -rw-r--r-- 1 boincer umatlas        29 Nov 27 11:04 wrapper_checkpoint.txt
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas      4817 Nov 27 11:04 pilotlog.txt
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas   3669893 Nov 27 11:04 log.47493029._000714.job.log.1
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas       353 Nov 27 11:04 output.list
[2025-11-27 11:04:31] -rw-r--r-- 1 boincer umatlas       620 Nov 27 11:04 runtime_log
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas   5857280 Nov 27 11:04 result.tar.gz
[2025-11-27 11:04:31] -rw-r--r-- 1 boincer umatlas      8706 Nov 27 11:04 runtime_log.err
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas       670 Nov 27 11:04 HIFODmJTrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8fGKDmIp9Ovn.diag
[2025-11-27 11:04:31] -rw-r--r-- 1 boincer umatlas     21102 Nov 27 11:04 stderr.txt
[2025-11-27 11:04:31] HITS file was successfully produced:
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas 916960562 Nov 27 11:02 shared/HITS.pool.root.1
[2025-11-27 11:04:31]  *** Contents of shared directory: ***
[2025-11-27 11:04:31] total 1302444
[2025-11-27 11:04:31] -rw-r--r-- 2 boincer umatlas 410265236 Nov 27 03:46 ATLAS.root_0
[2025-11-27 11:04:31] -rw-r--r-- 2 boincer umatlas     15120 Nov 27 03:46 start_atlas.sh
[2025-11-27 11:04:31] -rw-r--r-- 2 boincer umatlas    590101 Nov 27 03:46 input.tar.gz
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas 916960562 Nov 27 11:02 HITS.pool.root.1
[2025-11-27 11:04:31] -rw------- 1 boincer umatlas   5857280 Nov 27 11:04 result.tar.gz
11:04:33 (3591): run_atlas exited; CPU time 290373.705855
11:04:33 (3591): called boinc_finish(0)

</stderr_txt>
]]>

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