Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:22:56 (1050707): wrapper (7.7.26015): starting
05:22:56 (1050707): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 05:22:56] Arguments: --nthreads 8
[2025-11-27 05:22:56] Threads: 8
[2025-11-27 05:22:56] Checking for CVMFS
[2025-11-27 05:22:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:22:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:22:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:22:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:22:56] 2.13.3.0 11502 31319 349376 153360 0 582 29729878 32935937 56861 16776704 0 309065489 99.634 288560748 36473 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 05:22:56] CVMFS is ok
[2025-11-27 05:22:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:22:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:22:56] Further information can be found at the LHC@home message board.
[2025-11-27 05:22:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:22:56] Checking for apptainer binary...
[2025-11-27 05:22:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:22:56] Running /usr/bin/apptainer --version
[2025-11-27 05:22:56] apptainer version 1.4.4-1.el9
[2025-11-27 05:22:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:22:57] c7-2-15.aglt2.org
[2025-11-27 05:22:57] apptainer works
[2025-11-27 05:22:57] Set ATHENA_PROC_NUMBER=8
[2025-11-27 05:22:57] Set ATHENA_CORE_NUMBER=8
[2025-11-27 05:22:57] Starting ATLAS job with PandaID=6897863640
[2025-11-27 05:22:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:06:17]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:06:17] 2025-11-27 20:05:07,263 | INFO     | time since job start (34916s) is within the limit (172800.0s)
[2025-11-27 15:06:17] 2025-11-27 20:05:07,695 | INFO     | monitor loop #2316: job 0:6897863640 is in state 'finished'
[2025-11-27 15:06:17] 2025-11-27 20:05:07,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:06:17] 2025-11-27 20:05:07,856 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 15:06:17] 2025-11-27 20:05:07,866 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3331.285177083333
[2025-11-27 15:06:17] 2025-11-27 20:05:07,881 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6897863640/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:06:17] 2025-11-27 20:05:07,881 | INFO     | extracted standard info from prmon json
[2025-11-27 15:06:17] 2025-11-27 20:05:07,882 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:06:17] 2025-11-27 20:05:07,882 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:06:17] 2025-11-27 20:05:07,889 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:06:17] 2025-11-27 20:05:07,890 | INFO     | sum of square deviations: 58035217070.30071
[2025-11-27 15:06:17] 2025-11-27 20:05:07,896 | INFO     | sum of deviations: 374046380215.6884
[2025-11-27 15:06:17] 2025-11-27 20:05:07,901 | INFO     | mean x: 1764256441.534965
[2025-11-27 15:06:17] 2025-11-27 20:05:07,901 | INFO     | mean y: 2871165.1905594408
[2025-11-27 15:06:17] 2025-11-27 20:05:07,901 | INFO     | intersect: -11368047546.614744
[2025-11-27 15:06:17] 2025-11-27 20:05:07,901 | INFO     | chi2: 5.934761136951599
[2025-11-27 15:06:17] 2025-11-27 20:05:07,902 | INFO     | sum of square deviations: 56526848409.897736
[2025-11-27 15:06:17] 2025-11-27 20:05:07,933 | INFO     | sum of deviations: 574940682979.6062
[2025-11-27 15:06:17] 2025-11-27 20:05:07,947 | INFO     | mean x: 1764256289.0440917
[2025-11-27 15:06:17] 2025-11-27 20:05:07,947 | INFO     | mean y: 2891484.2557319226
[2025-11-27 15:06:17] 2025-11-27 20:05:07,947 | INFO     | intersect: -17941549861.89344
[2025-11-27 15:06:17] 2025-11-27 20:05:07,947 | INFO     | chi2: 2.5323664836801125
[2025-11-27 15:06:17] 2025-11-27 20:05:07,948 | INFO     | current chi2=2.5323664836801125 (change=57.32993417523006 %)
[2025-11-27 15:06:17] 2025-11-27 20:05:07,948 | INFO     | sum of square deviations: 55044645183.474976
[2025-11-27 15:06:17] 2025-11-27 20:05:07,955 | INFO     | sum of deviations: 619747375112.9485
[2025-11-27 15:06:17] 2025-11-27 20:05:07,955 | INFO     | mean x: 1764256136.5427046
[2025-11-27 15:06:17] 2025-11-27 20:05:07,955 | INFO     | mean y: 2896073.731316726
[2025-11-27 15:06:17] 2025-11-27 20:05:07,955 | INFO     | intersect: -19860854632.713455
[2025-11-27 15:06:17] 2025-11-27 20:05:07,960 | INFO     | chi2: 2.1638866493113964
[2025-11-27 15:06:17] 2025-11-27 20:05:07,960 | INFO     | current chi2=2.1638866493113964 (change=14.550809953590521 %)
[2025-11-27 15:06:17] 2025-11-27 20:05:07,960 | INFO     | right removable region: 561
[2025-11-27 15:06:17] 2025-11-27 20:05:07,960 | INFO     | sum of square deviations: 56526487289.89768
[2025-11-27 15:06:17] 2025-11-27 20:05:07,972 | INFO     | sum of deviations: 236582263837.67908
[2025-11-27 15:06:17] 2025-11-27 20:05:07,972 | INFO     | mean x: 1764256594.0440917
[2025-11-27 15:06:17] 2025-11-27 20:05:07,972 | INFO     | mean y: 2885018.172839506
[2025-11-27 15:06:17] 2025-11-27 20:05:07,972 | INFO     | intersect: -7381119172.091074
[2025-11-27 15:06:17] 2025-11-27 20:05:07,973 | INFO     | chi2: 3.8864564990096193
[2025-11-27 15:06:17] 2025-11-27 20:05:07,973 | INFO     | current chi2=3.8864564990096193 (change=34.513682870716096 %)
[2025-11-27 15:06:17] 2025-11-27 20:05:07,973 | INFO     | sum of square deviations: 55044130096.89866
[2025-11-27 15:06:17] 2025-11-27 20:05:07,989 | INFO     | sum of deviations: 212537753328.86832
[2025-11-27 15:06:17] 2025-11-27 20:05:07,990 | INFO     | mean x: 1764256746.5533807
[2025-11-27 15:06:17] 2025-11-27 20:05:07,990 | INFO     | mean y: 2887489.43772242
[2025-11-27 15:06:17] 2025-11-27 20:05:07,990 | INFO     | intersect: -6809304192.902646
[2025-11-27 15:06:17] 2025-11-27 20:05:07,990 | INFO     | chi2: 3.865978759973055
[2025-11-27 15:06:17] 2025-11-27 20:05:07,991 | INFO     | current chi2=3.865978759973055 (change=0.5268999933945686 %)
[2025-11-27 15:06:17] 2025-11-27 20:05:07,991 | INFO     | left removable region: 20
[2025-11-27 15:06:17] 2025-11-27 20:05:07,991 | INFO     | sum of square deviations: 49101630829.89297
[2025-11-27 15:06:17] 2025-11-27 20:05:08,015 | INFO     | sum of deviations: 428044925382.6562
[2025-11-27 15:06:17] 2025-11-27 20:05:08,015 | INFO     | mean x: 1764256716.0757856
[2025-11-27 15:06:17] 2025-11-27 20:05:08,015 | INFO     | mean y: 2915840.6913123843
[2025-11-27 15:06:17] 2025-11-27 20:05:08,035 | INFO     | intersect: -15377044491.069338
[2025-11-27 15:06:17] 2025-11-27 20:05:08,036 | INFO     | chi2: 0.05405208872967207
[2025-11-27 15:06:17] 2025-11-27 20:05:08,036 | INFO     | current memory leak: 8.72 B/s (using 541 data points, chi2=0.05)
[2025-11-27 15:06:17] 2025-11-27 20:05:08,059 | INFO     | could have reported an average CPU frequency of 3297 MHz (23 samples)
[2025-11-27 15:06:17] 2025-11-27 20:05:08,059 | INFO     | ..............................
[2025-11-27 15:06:17] 2025-11-27 20:05:08,059 | INFO     | . Timing measurements:
[2025-11-27 15:06:17] 2025-11-27 20:05:08,059 | INFO     | . get job = 0 s
[2025-11-27 15:06:17] 2025-11-27 20:05:08,059 | INFO     | . initial setup = 2 s
[2025-11-27 15:06:17] 2025-11-27 20:05:08,059 | INFO     | . payload setup = 9 s
[2025-11-27 15:06:17] 2025-11-27 20:05:08,059 | INFO     | . stage-in = 0 s
[2025-11-27 15:06:17] 2025-11-27 20:05:08,059 | INFO     | . payload execution = 34868 s
[2025-11-27 15:06:17] 2025-11-27 20:05:08,059 | INFO     | . stage-out = 3 s
[2025-11-27 15:06:17] 2025-11-27 20:05:08,060 | INFO     | . log creation = 0 s
[2025-11-27 15:06:17] 2025-11-27 20:05:08,060 | INFO     | ..............................
[2025-11-27 15:06:17] 2025-11-27 20:05:08,168 | INFO     | 
[2025-11-27 15:06:17] 2025-11-27 20:05:08,168 | INFO     | job summary report
[2025-11-27 15:06:17] 2025-11-27 20:05:08,168 | INFO     | --------------------------------------------------
[2025-11-27 15:06:17] 2025-11-27 20:05:08,168 | INFO     | PanDA job id: 6897863640
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | task id: 47556161
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | errors: (none)
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | pilot state: finished 
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | transexitcode: 0
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | exeerrorcode: 0
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | exeerrordiag: 
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | exitcode: 0
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | exitmsg: OK
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | cpuconsumptiontime: 179369 s
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | nevents: 1000
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | neventsw: 0
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | pid: 1061811
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | pgrp: 1061811
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | corecount: 8
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | event service: False
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | sizes: {0: 2284265, 7: 2284527, 11: 2284555, 34878: 2327071, 34879: 2327070, 34884: 2336120, 34885: 2336304, 34899: 2336550}
[2025-11-27 15:06:17] 2025-11-27 20:05:08,169 | INFO     | --------------------------------------------------
[2025-11-27 15:06:17] 2025-11-27 20:05:08,170 | INFO     | 
[2025-11-27 15:06:17] 2025-11-27 20:05:08,170 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 15:06:17] 2025-11-27 20:05:08,217 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,217 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,217 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,217 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,217 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,217 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,217 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,218 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,218 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,218 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,218 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,218 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:06:17] 2025-11-27 20:05:08,218 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,218 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:06:17] 2025-11-27 20:05:08,219 | INFO     | job 6897863640 has completed (purged errors)
[2025-11-27 15:06:17] 2025-11-27 20:05:08,219 | INFO     | overall cleanup function is called
[2025-11-27 15:06:17] 2025-11-27 20:05:09,239 | INFO     | --- collectZombieJob: --- 10, [1061811]
[2025-11-27 15:06:17] 2025-11-27 20:05:09,239 | INFO     | zombie collector waiting for pid 1061811
[2025-11-27 15:06:17] 2025-11-27 20:05:09,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:06:17] 2025-11-27 20:05:09,239 | INFO     | collected zombie processes
[2025-11-27 15:06:17] 2025-11-27 20:05:09,239 | INFO     | will attempt to kill all subprocesses of pid=1061811
[2025-11-27 15:06:17] 2025-11-27 20:05:10,103 | INFO     | process IDs to be killed: [1061811] (in reverse order)
[2025-11-27 15:06:17] 2025-11-27 20:05:10,469 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:06:17] 2025-11-27 20:05:10,469 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:06:17] 2025-11-27 20:05:10,502 | INFO     | did not find any defunct processes belonging to 1061811
[2025-11-27 15:06:17] 2025-11-27 20:05:10,534 | INFO     | did not find any defunct processes belonging to 1061811
[2025-11-27 15:06:17] 2025-11-27 20:05:10,535 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:06:17] 2025-11-27 20:05:10,535 | INFO     | ready for new job
[2025-11-27 15:06:17] 2025-11-27 20:05:10,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:06:17] 2025-11-27 20:05:10,538 | INFO     | ***************************************
[2025-11-27 15:06:17] 2025-11-27 20:05:10,538 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:06:17] 2025-11-27 20:05:10,539 | INFO     | ***************************************
[2025-11-27 15:06:17] 2025-11-27 20:05:10,539 | INFO     | 
[2025-11-27 15:06:17] 2025-11-27 20:05:10,543 | INFO     | architecture information:
[2025-11-27 15:06:17] 2025-11-27 20:05:10,544 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:06:17] 2025-11-27 20:05:10,558 | INFO     | cat /etc/os-release:
[2025-11-27 15:06:17] NAME="CentOS Linux"
[2025-11-27 15:06:17] VERSION="7 (Core)"
[2025-11-27 15:06:17] ID="centos"
[2025-11-27 15:06:17] ID_LIKE="rhel fedora"
[2025-11-27 15:06:17] VERSION_ID="7"
[2025-11-27 15:06:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:06:17] ANSI_COLOR="0;31"
[2025-11-27 15:06:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:06:17] HOME_URL="https://www.centos.org/"
[2025-11-27 15:06:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:06:17] 
[2025-11-27 15:06:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:06:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:06:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:06:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:06:17] 
[2025-11-27 15:06:17] 2025-11-27 20:05:10,558 | INFO     | ***************************************
[2025-11-27 15:06:17] 2025-11-27 20:05:11,062 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 15:06:17] 2025-11-27 20:05:11,101 | INFO     | sufficient remaining disk space (66664267776 B)
[2025-11-27 15:06:17] 2025-11-27 20:05:11,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:06:17] 2025-11-27 20:05:11,104 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:06:17] 2025-11-27 20:05:11,104 | INFO     | update_server=False
[2025-11-27 15:06:17] 2025-11-27 20:05:11,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:06:17] 2025-11-27 20:05:11,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:06:17] 2025-11-27 20:05:11,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:06:17] 2025-11-27 20:05:11,211 | INFO     | aborting loop
[2025-11-27 15:06:17] 2025-11-27 20:05:11,404 | INFO     | all data control threads have been joined
[2025-11-27 15:06:17] 2025-11-27 20:05:12,115 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:12,141 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:12,218 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:12,412 | INFO     | [data] control thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:12,416 | INFO     | all payload control threads have been joined
[2025-11-27 15:06:17] 2025-11-27 20:05:12,497 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:12,582 | INFO     | all job control threads have been joined
[2025-11-27 15:06:17] 2025-11-27 20:05:12,698 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:12,969 | INFO     | [job] validate thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:13,112 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:13,145 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:13,182 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:13,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:06:17] 2025-11-27 20:05:13,242 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:13,305 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:13,435 | INFO     | [payload] control thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:13,457 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:06:17] 2025-11-27 20:05:13,588 | INFO     | [job] control thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:14,213 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:17,480 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:06:17] 2025-11-27 20:05:41,284 | INFO     | PID=1054485 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:06:17] 2025-11-27 20:05:41,284 | INFO     | .. there are 88 such processes running
[2025-11-27 15:06:17] 2025-11-27 20:05:41,285 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:06:17] 2025-11-27 20:05:41,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:06:17] 2025-11-27 20:05:41,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:06:17] 2025-11-27 20:06:10,662 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:06:17] 2025-11-27 20:06:12,058 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577102006080)>', '<ExcThread(monitor, started 140576620013312)>']
[2025-11-27 15:06:17] 2025-11-27 20:06:12,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:06:17] 2025-11-27 20:06:12,555 | INFO     | [monitor] control thread has ended
[2025-11-27 15:06:17] 2025-11-27 20:06:17,083 | INFO     | all workflow threads have been joined
[2025-11-27 15:06:17] 2025-11-27 20:06:17,084 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:06:17] 2025-11-27 20:06:17,084 | INFO     | traces error code: 0
[2025-11-27 15:06:17] 2025-11-27 20:06:17,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:06:17] 2025-11-27 20:06:17,311 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:06:17] 2025-11-27 20:06:17,314 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:06:17] 2025-11-27 20:06:17,328 [wrapper] pilotpid: 1054485
[2025-11-27 15:06:17] 2025-11-27 20:06:17,331 [wrapper] Pilot exit status: 0
[2025-11-27 15:06:17] 2025-11-27 20:06:17,345 [wrapper] pandaids: 6897863640
[2025-11-27 15:06:17] 2025-11-27 20:06:17,511 [wrapper] cleanup supervisor_pilot  464395 1054486
[2025-11-27 15:06:17] 2025-11-27 20:06:17,515 [wrapper] Test setup, not cleaning
[2025-11-27 15:06:17] 2025-11-27 20:06:17,517 [wrapper] apfmon messages muted
[2025-11-27 15:06:17] 2025-11-27 20:06:17,519 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:06:17] 2025-11-27 20:06:17,521 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:06:17]  *** Error codes and diagnostics ***
[2025-11-27 15:06:17]     "exeErrorCode": 0,
[2025-11-27 15:06:17]     "exeErrorDiag": "",
[2025-11-27 15:06:17]     "pilotErrorCode": 0,
[2025-11-27 15:06:17]     "pilotErrorDiag": "",
[2025-11-27 15:06:17]  *** Listing of results directory ***
[2025-11-27 15:06:17] total 1312768
[2025-11-27 15:06:17] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 15:06:17] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-27 15:06:17] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 15:06:17] -rw-r--r--. 1 boincer umatlas       100 Nov 27 05:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:06:17] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 05:22 run_atlas
[2025-11-27 15:06:17] -rw-r--r--. 1 boincer umatlas       105 Nov 27 05:22 job.xml
[2025-11-27 15:06:17] -rw-r--r--. 2 boincer umatlas 409145218 Nov 27 05:22 EVNT.47483658._002329.pool.root.1
[2025-11-27 15:06:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:22 start_atlas.sh
[2025-11-27 15:06:17] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 05:22 shared
[2025-11-27 15:06:17] -rw-r--r--. 2 boincer umatlas    590110 Nov 27 05:22 input.tar.gz
[2025-11-27 15:06:17] -rw-r--r--. 1 boincer umatlas         0 Nov 27 05:22 boinc_lockfile
[2025-11-27 15:06:17] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 05:22 pandaJob.out
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas        57 Nov 27 05:22 setup.sh.local
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas    991564 Nov 27 05:23 agis_schedconf.cvmfs.json
[2025-11-27 15:06:17] drwx------. 5 boincer umatlas      4096 Nov 27 05:23 pilot3
[2025-11-27 15:06:17] -rw-r--r--. 1 boincer umatlas       532 Nov 27 14:55 boinc_task_state.xml
[2025-11-27 15:06:17] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 15:02 init_data.xml
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas 918097346 Nov 27 15:04 HITS.47556161._003119.pool.root.1
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas      1059 Nov 27 15:04 memory_monitor_summary.json
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas   1516240 Nov 27 15:04 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas   1829587 Nov 27 15:04 log.47556161._003119.job.log.tgz.1
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas      8590 Nov 27 15:05 heartbeat.json
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas        95 Nov 27 15:05 pilot_heartbeat.json
[2025-11-27 15:06:17] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 15:06 boinc_mmap_file
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas      4824 Nov 27 15:06 pilotlog.txt
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas   4727027 Nov 27 15:06 log.47556161._003119.job.log.1
[2025-11-27 15:06:17] -rw-r--r--. 1 boincer umatlas        29 Nov 27 15:06 wrapper_checkpoint.txt
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas       353 Nov 27 15:06 output.list
[2025-11-27 15:06:17] -rw-r--r--. 1 boincer umatlas       620 Nov 27 15:06 runtime_log
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas   6574080 Nov 27 15:06 result.tar.gz
[2025-11-27 15:06:17] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 15:06 runtime_log.err
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas       661 Nov 27 15:06 rGzNDmXbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAdMKDmUeXrEm.diag
[2025-11-27 15:06:17] -rw-r--r--. 1 boincer umatlas     21348 Nov 27 15:06 stderr.txt
[2025-11-27 15:06:17] HITS file was successfully produced:
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas 918097346 Nov 27 15:04 shared/HITS.pool.root.1
[2025-11-27 15:06:17]  *** Contents of shared directory: ***
[2025-11-27 15:06:17] total 1303160
[2025-11-27 15:06:17] -rw-r--r--. 2 boincer umatlas 409145218 Nov 27 05:22 ATLAS.root_0
[2025-11-27 15:06:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:22 start_atlas.sh
[2025-11-27 15:06:17] -rw-r--r--. 2 boincer umatlas    590110 Nov 27 05:22 input.tar.gz
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas 918097346 Nov 27 15:04 HITS.pool.root.1
[2025-11-27 15:06:17] -rw-------. 1 boincer umatlas   6574080 Nov 27 15:06 result.tar.gz
15:06:19 (1050707): run_atlas exited; CPU time 180087.325649
15:06:19 (1050707): called boinc_finish(0)

</stderr_txt>
]]>

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