Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:21:52 (25188): wrapper (7.7.26015): starting
02:21:52 (25188): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 02:21:52] Arguments: --nthreads 8
[2025-11-27 02:21:52] Threads: 8
[2025-11-27 02:21:52] Checking for CVMFS
[2025-11-27 02:21:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 02:21:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 02:21:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 02:21:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 02:21:52] 2.11.2.0 6956 118790 139276 153352 3 90 13431341 18432001 1532 130560 0 87570191 99.974 5058411 30990 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 02:21:52] CVMFS is ok
[2025-11-27 02:21:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 02:21:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 02:21:52] Further information can be found at the LHC@home message board.
[2025-11-27 02:21:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 02:21:52] Checking for apptainer binary...
[2025-11-27 02:21:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 02:21:52] Running /usr/bin/apptainer --version
[2025-11-27 02:21:52] apptainer version 1.3.2-1.el7
[2025-11-27 02:21:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 02:21:53] c-206-16.aglt2.org
[2025-11-27 02:21:53] apptainer works
[2025-11-27 02:21:53] Set ATHENA_PROC_NUMBER=8
[2025-11-27 02:21:53] Set ATHENA_CORE_NUMBER=8
[2025-11-27 02:21:53] Starting ATLAS job with PandaID=6898215336
[2025-11-27 02:21:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:43:06]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:43:06] 2025-11-28 02:42:32,541 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2516.75
[2025-11-27 21:43:06] 2025-11-28 02:42:32,544 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6898215336/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 21:43:06] 2025-11-28 02:42:32,544 | INFO     | extracted standard info from prmon json
[2025-11-27 21:43:06] 2025-11-28 02:42:32,545 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 21:43:06] 2025-11-28 02:42:32,545 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 21:43:06] 2025-11-28 02:42:32,560 | INFO     | fitting pss+swap vs Time
[2025-11-27 21:43:06] 2025-11-28 02:42:32,561 | INFO     | sum of square deviations: 460610971975.75116
[2025-11-27 21:43:06] 2025-11-28 02:42:32,584 | INFO     | sum of deviations: 2326369822585.435
[2025-11-27 21:43:06] 2025-11-28 02:42:32,584 | INFO     | mean x: 1764262918.5810692
[2025-11-27 21:43:06] 2025-11-28 02:42:32,584 | INFO     | mean y: 2865519.1682734443
[2025-11-27 21:43:06] 2025-11-28 02:42:32,584 | INFO     | intersect: -8907751601.584064
[2025-11-27 21:43:06] 2025-11-28 02:42:32,586 | INFO     | chi2: 4.956537613113238
[2025-11-27 21:43:06] 2025-11-28 02:42:32,588 | INFO     | sum of square deviations: 454582298359.0554
[2025-11-27 21:43:06] 2025-11-28 02:42:32,629 | INFO     | sum of deviations: 2614891913044.445
[2025-11-27 21:43:06] 2025-11-28 02:42:32,629 | INFO     | mean x: 1764262766.0836267
[2025-11-27 21:43:06] 2025-11-28 02:42:32,629 | INFO     | mean y: 2872812.1742957747
[2025-11-27 21:43:06] 2025-11-28 02:42:32,629 | INFO     | intersect: -10145688749.001152
[2025-11-27 21:43:06] 2025-11-28 02:42:32,631 | INFO     | chi2: 2.9243043903744503
[2025-11-27 21:43:06] 2025-11-28 02:42:32,631 | INFO     | current chi2=2.9243043903744503 (change=41.00106528723237 %)
[2025-11-27 21:43:06] 2025-11-28 02:42:32,633 | INFO     | sum of square deviations: 448606462942.3447
[2025-11-27 21:43:06] 2025-11-28 02:42:32,657 | INFO     | sum of deviations: 2704513754289.0356
[2025-11-27 21:43:06] 2025-11-28 02:42:32,657 | INFO     | mean x: 1764262613.586207
[2025-11-27 21:43:06] 2025-11-28 02:42:32,657 | INFO     | mean y: 2875094.732979664
[2025-11-27 21:43:06] 2025-11-28 02:42:32,658 | INFO     | intersect: -10633334810.32818
[2025-11-27 21:43:06] 2025-11-28 02:42:32,659 | INFO     | chi2: 2.5575478028954155
[2025-11-27 21:43:06] 2025-11-28 02:42:32,659 | INFO     | current chi2=2.5575478028954155 (change=12.541669351735047 %)
[2025-11-27 21:43:06] 2025-11-28 02:42:32,659 | INFO     | right removable region: 1130
[2025-11-27 21:43:06] 2025-11-28 02:42:32,660 | INFO     | sum of square deviations: 454581893929.0555
[2025-11-27 21:43:06] 2025-11-28 02:42:32,682 | INFO     | sum of deviations: 2019028751360.1338
[2025-11-27 21:43:06] 2025-11-28 02:42:32,683 | INFO     | mean x: 1764263071.0836267
[2025-11-27 21:43:06] 2025-11-28 02:42:32,683 | INFO     | mean y: 2873285.1038732394
[2025-11-27 21:43:06] 2025-11-28 02:42:32,683 | INFO     | intersect: -7833113834.164652
[2025-11-27 21:43:06] 2025-11-28 02:42:32,684 | INFO     | chi2: 2.814885772428205
[2025-11-27 21:43:06] 2025-11-28 02:42:32,684 | INFO     | current chi2=2.814885772428205 (change=43.208626824882415 %)
[2025-11-27 21:43:06] 2025-11-28 02:42:32,685 | INFO     | sum of square deviations: 448605861604.85345
[2025-11-27 21:43:06] 2025-11-28 02:42:32,712 | INFO     | sum of deviations: 1925328671050.5396
[2025-11-27 21:43:06] 2025-11-28 02:42:32,712 | INFO     | mean x: 1764263223.5835543
[2025-11-27 21:43:06] 2025-11-28 02:42:32,712 | INFO     | mean y: 2875675.824933687
[2025-11-27 21:43:06] 2025-11-28 02:42:32,712 | INFO     | intersect: -7568997227.247974
[2025-11-27 21:43:06] 2025-11-28 02:42:32,714 | INFO     | chi2: 2.717606305803119
[2025-11-27 21:43:06] 2025-11-28 02:42:32,714 | INFO     | current chi2=2.717606305803119 (change=3.4558939328173817 %)
[2025-11-27 21:43:06] 2025-11-28 02:42:32,714 | INFO     | left removable region: 20
[2025-11-27 21:43:06] 2025-11-28 02:42:32,716 | INFO     | sum of square deviations: 424078698162.17017
[2025-11-27 21:43:06] 2025-11-28 02:42:32,754 | INFO     | sum of deviations: 2159535182449.6467
[2025-11-27 21:43:06] 2025-11-28 02:42:32,755 | INFO     | mean x: 1764263193.0891893
[2025-11-27 21:43:06] 2025-11-28 02:42:32,755 | INFO     | mean y: 2889010.67027027
[2025-11-27 21:43:06] 2025-11-28 02:42:32,755 | INFO     | intersect: -8981265234.96481
[2025-11-27 21:43:06] 2025-11-28 02:42:32,757 | INFO     | chi2: 0.23815569741325113
[2025-11-27 21:43:06] 2025-11-28 02:42:32,757 | INFO     | current memory leak: 5.09 B/s (using 1110 data points, chi2=0.24)
[2025-11-27 21:43:06] 2025-11-28 02:42:32,758 | INFO     | could have reported an average CPU frequency of 2623 MHz (41 samples)
[2025-11-27 21:43:06] 2025-11-28 02:42:32,758 | INFO     | ..............................
[2025-11-27 21:43:06] 2025-11-28 02:42:32,758 | INFO     | . Timing measurements:
[2025-11-27 21:43:06] 2025-11-28 02:42:32,758 | INFO     | . get job = 0 s
[2025-11-27 21:43:06] 2025-11-28 02:42:32,758 | INFO     | . initial setup = 2 s
[2025-11-27 21:43:06] 2025-11-28 02:42:32,759 | INFO     | . payload setup = 4 s
[2025-11-27 21:43:06] 2025-11-28 02:42:32,759 | INFO     | . stage-in = 0 s
[2025-11-27 21:43:06] 2025-11-28 02:42:32,759 | INFO     | . payload execution = 69597 s
[2025-11-27 21:43:06] 2025-11-28 02:42:32,759 | INFO     | . stage-out = 3 s
[2025-11-27 21:43:06] 2025-11-28 02:42:32,759 | INFO     | . log creation = 0 s
[2025-11-27 21:43:06] 2025-11-28 02:42:32,759 | INFO     | ..............................
[2025-11-27 21:43:06] 2025-11-28 02:42:33,221 | INFO     | time since job start (69630s) is within the limit (172800.0s)
[2025-11-27 21:43:06] 2025-11-28 02:42:33,394 | INFO     | 
[2025-11-27 21:43:06] 2025-11-28 02:42:33,394 | INFO     | job summary report
[2025-11-27 21:43:06] 2025-11-28 02:42:33,394 | INFO     | --------------------------------------------------
[2025-11-27 21:43:06] 2025-11-28 02:42:33,395 | INFO     | PanDA job id: 6898215336
[2025-11-27 21:43:06] 2025-11-28 02:42:33,395 | INFO     | task id: 47556161
[2025-11-27 21:43:06] 2025-11-28 02:42:33,395 | INFO     | errors: (none)
[2025-11-27 21:43:06] 2025-11-28 02:42:33,395 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 21:43:06] 2025-11-28 02:42:33,395 | INFO     | pilot state: finished 
[2025-11-27 21:43:06] 2025-11-28 02:42:33,396 | INFO     | transexitcode: 0
[2025-11-27 21:43:06] 2025-11-28 02:42:33,396 | INFO     | exeerrorcode: 0
[2025-11-27 21:43:06] 2025-11-28 02:42:33,396 | INFO     | exeerrordiag: 
[2025-11-27 21:43:06] 2025-11-28 02:42:33,396 | INFO     | exitcode: 0
[2025-11-27 21:43:06] 2025-11-28 02:42:33,396 | INFO     | exitmsg: OK
[2025-11-27 21:43:06] 2025-11-28 02:42:33,396 | INFO     | cpuconsumptiontime: 535451 s
[2025-11-27 21:43:06] 2025-11-28 02:42:33,397 | INFO     | nevents: 1000
[2025-11-27 21:43:06] 2025-11-28 02:42:33,397 | INFO     | neventsw: 0
[2025-11-27 21:43:06] 2025-11-28 02:42:33,397 | INFO     | pid: 3104
[2025-11-27 21:43:06] 2025-11-28 02:42:33,397 | INFO     | pgrp: 3104
[2025-11-27 21:43:06] 2025-11-28 02:42:33,397 | INFO     | corecount: 8
[2025-11-27 21:43:06] 2025-11-28 02:42:33,397 | INFO     | event service: False
[2025-11-27 21:43:06] 2025-11-28 02:42:33,398 | INFO     | sizes: {0: 2284144, 1: 2284286, 4: 2284548, 11: 2284576, 69602: 2340830, 69606: 2349824, 69610: 2350008, 69614: 2350350}
[2025-11-27 21:43:06] 2025-11-28 02:42:33,398 | INFO     | --------------------------------------------------
[2025-11-27 21:43:06] 2025-11-28 02:42:33,398 | INFO     | 
[2025-11-27 21:43:06] 2025-11-28 02:42:33,398 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 21:43:06] 2025-11-28 02:42:33,419 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,419 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,419 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,419 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,419 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,419 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,419 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,420 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,420 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,421 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,421 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,421 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 21:43:06] 2025-11-28 02:42:33,421 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,421 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 21:43:06] 2025-11-28 02:42:33,421 | INFO     | job 6898215336 has completed (purged errors)
[2025-11-27 21:43:06] 2025-11-28 02:42:33,421 | INFO     | overall cleanup function is called
[2025-11-27 21:43:06] 2025-11-28 02:42:34,403 | INFO     | PID=28891 has CPU usage=18.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 21:43:06] 2025-11-28 02:42:34,404 | INFO     | .. there are 3 such processes running
[2025-11-27 21:43:06] 2025-11-28 02:42:34,429 | INFO     | --- collectZombieJob: --- 10, [3104]
[2025-11-27 21:43:06] 2025-11-28 02:42:34,429 | INFO     | zombie collector waiting for pid 3104
[2025-11-27 21:43:06] 2025-11-28 02:42:34,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 21:43:06] 2025-11-28 02:42:34,430 | INFO     | collected zombie processes
[2025-11-27 21:43:06] 2025-11-28 02:42:34,430 | INFO     | will attempt to kill all subprocesses of pid=3104
[2025-11-27 21:43:06] 2025-11-28 02:42:34,592 | INFO     | process IDs to be killed: [3104] (in reverse order)
[2025-11-27 21:43:06] 2025-11-28 02:42:34,656 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 21:43:06] 2025-11-28 02:42:34,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 21:43:06] 2025-11-28 02:42:34,659 | INFO     | did not find any defunct processes belonging to 3104
[2025-11-27 21:43:06] 2025-11-28 02:42:34,662 | INFO     | did not find any defunct processes belonging to 3104
[2025-11-27 21:43:06] 2025-11-28 02:42:34,663 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 21:43:06] 2025-11-28 02:42:34,663 | INFO     | ready for new job
[2025-11-27 21:43:06] 2025-11-28 02:42:34,663 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 21:43:06] 2025-11-28 02:42:34,667 | INFO     | ***************************************
[2025-11-27 21:43:06] 2025-11-28 02:42:34,667 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 21:43:06] 2025-11-28 02:42:34,667 | INFO     | ***************************************
[2025-11-27 21:43:06] 2025-11-28 02:42:34,667 | INFO     | 
[2025-11-27 21:43:06] 2025-11-28 02:42:34,668 | INFO     | architecture information:
[2025-11-27 21:43:06] 2025-11-28 02:42:34,668 | INFO     | executing command: cat /etc/os-release
[2025-11-27 21:43:06] 2025-11-28 02:42:34,679 | INFO     | cat /etc/os-release:
[2025-11-27 21:43:06] NAME="CentOS Linux"
[2025-11-27 21:43:06] VERSION="7 (Core)"
[2025-11-27 21:43:06] ID="centos"
[2025-11-27 21:43:06] ID_LIKE="rhel fedora"
[2025-11-27 21:43:06] VERSION_ID="7"
[2025-11-27 21:43:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 21:43:06] ANSI_COLOR="0;31"
[2025-11-27 21:43:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 21:43:06] HOME_URL="https://www.centos.org/"
[2025-11-27 21:43:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 21:43:06] 
[2025-11-27 21:43:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 21:43:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 21:43:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 21:43:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 21:43:06] 
[2025-11-27 21:43:06] 2025-11-28 02:42:34,679 | INFO     | ***************************************
[2025-11-27 21:43:06] 2025-11-28 02:42:35,182 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 21:43:06] 2025-11-28 02:42:35,197 | INFO     | sufficient remaining disk space (25361907712 B)
[2025-11-27 21:43:06] 2025-11-28 02:42:35,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 21:43:06] 2025-11-28 02:42:35,197 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 21:43:06] 2025-11-28 02:42:35,197 | INFO     | update_server=False
[2025-11-27 21:43:06] 2025-11-28 02:42:35,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 21:43:06] 2025-11-28 02:42:35,198 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 21:43:06] 2025-11-28 02:42:35,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:43:06] 2025-11-28 02:42:35,198 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:43:06] 2025-11-28 02:42:35,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:43:06] 2025-11-28 02:42:35,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:43:06] 2025-11-28 02:42:35,274 | INFO     | all data control threads have been joined
[2025-11-27 21:43:06] 2025-11-28 02:42:35,297 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 21:43:06] 2025-11-28 02:42:35,297 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 21:43:06] 2025-11-28 02:42:35,297 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:43:06] 2025-11-28 02:42:35,298 | INFO     | will abort loop
[2025-11-27 21:43:06] 2025-11-28 02:42:35,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 21:43:06] 2025-11-28 02:42:36,202 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:36,279 | INFO     | [data] control thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:36,304 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:36,515 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:36,555 | INFO     | all payload control threads have been joined
[2025-11-27 21:43:06] 2025-11-28 02:42:36,580 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:36,628 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:36,657 | INFO     | all job control threads have been joined
[2025-11-27 21:43:06] 2025-11-28 02:42:36,942 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:36,968 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:37,092 | INFO     | [job] validate thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:37,325 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:37,561 | INFO     | [payload] control thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:37,609 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:37,635 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:37,663 | INFO     | [job] control thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:37,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:43:06] 2025-11-28 02:42:38,924 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:39,204 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:43:06] 2025-11-28 02:42:59,047 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:43:06] 2025-11-28 02:43:00,783 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140688653141824)>', '<ExcThread(monitor, started 140688222054144)>']
[2025-11-27 21:43:06] 2025-11-28 02:43:01,330 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:43:06] 2025-11-28 02:43:01,330 | INFO     | [monitor] control thread has ended
[2025-11-27 21:43:06] 2025-11-28 02:43:05,808 | INFO     | all workflow threads have been joined
[2025-11-27 21:43:06] 2025-11-28 02:43:05,808 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:43:06] 2025-11-28 02:43:05,809 | INFO     | traces error code: 0
[2025-11-27 21:43:06] 2025-11-28 02:43:05,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:43:06] 2025-11-28 02:43:05,900 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:43:06] 2025-11-28 02:43:05,902 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:43:06] 2025-11-28 02:43:05,904 [wrapper] pilotpid: 28891
[2025-11-27 21:43:06] 2025-11-28 02:43:05,906 [wrapper] Pilot exit status: 0
[2025-11-27 21:43:06] 2025-11-28 02:43:05,913 [wrapper] pandaids: 6898215336
[2025-11-27 21:43:06] 2025-11-28 02:43:05,940 [wrapper] cleanup supervisor_pilot 27042 28892
[2025-11-27 21:43:06] 2025-11-28 02:43:05,942 [wrapper] Test setup, not cleaning
[2025-11-27 21:43:06] 2025-11-28 02:43:05,945 [wrapper] apfmon messages muted
[2025-11-27 21:43:06] 2025-11-28 02:43:05,947 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:43:06] 2025-11-28 02:43:05,948 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:43:06]  *** Error codes and diagnostics ***
[2025-11-27 21:43:06]     "exeErrorCode": 0,
[2025-11-27 21:43:06]     "exeErrorDiag": "",
[2025-11-27 21:43:06]     "pilotErrorCode": 0,
[2025-11-27 21:43:06]     "pilotErrorDiag": "",
[2025-11-27 21:43:06]  *** Listing of results directory ***
[2025-11-27 21:43:06] total 1313300
[2025-11-27 21:43:06] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 23:39 pilot3.tar.gz
[2025-11-27 21:43:06] -rwx------ 1 boincer umatlas     36292 Nov 25 23:47 runpilot2-wrapper.sh
[2025-11-27 21:43:06] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 23:47 queuedata.json
[2025-11-27 21:43:06] -rw-r--r-- 1 boincer umatlas       100 Nov 27 02:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:43:06] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 02:21 run_atlas
[2025-11-27 21:43:06] -rw-r--r-- 1 boincer umatlas       105 Nov 27 02:21 job.xml
[2025-11-27 21:43:06] -rw-r--r-- 2 boincer umatlas 409691093 Nov 27 02:21 EVNT.47483658._002509.pool.root.1
[2025-11-27 21:43:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 02:21 start_atlas.sh
[2025-11-27 21:43:06] drwxrwx--x 2 boincer umatlas      4096 Nov 27 02:21 shared
[2025-11-27 21:43:06] -rw-r--r-- 2 boincer umatlas    590101 Nov 27 02:21 input.tar.gz
[2025-11-27 21:43:06] -rw-r--r-- 1 boincer umatlas         0 Nov 27 02:21 boinc_lockfile
[2025-11-27 21:43:06] -rw-r--r-- 1 boincer umatlas      2782 Nov 27 02:21 pandaJob.out
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas        57 Nov 27 02:21 setup.sh.local
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas    991570 Nov 27 02:22 agis_schedconf.cvmfs.json
[2025-11-27 21:43:06] drwx------ 5 boincer umatlas      4096 Nov 27 02:22 pilot3
[2025-11-27 21:43:06] -rw-r--r-- 1 boincer umatlas       533 Nov 27 21:33 boinc_task_state.xml
[2025-11-27 21:43:06] -rw-r--r-- 1 boincer umatlas      5953 Nov 27 21:36 init_data.xml
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas 907339848 Nov 27 21:41 HITS.47556161._004911.pool.root.1
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas        95 Nov 27 21:42 pilot_heartbeat.json
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas      1064 Nov 27 21:42 memory_monitor_summary.json
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas   1516240 Nov 27 21:42 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas   2298542 Nov 27 21:42 log.47556161._004911.job.log.tgz.1
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas      8648 Nov 27 21:42 heartbeat.json
[2025-11-27 21:43:06] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 21:42 boinc_mmap_file
[2025-11-27 21:43:06] -rw-r--r-- 1 boincer umatlas        29 Nov 27 21:42 wrapper_checkpoint.txt
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas      4738 Nov 27 21:43 pilotlog.txt
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas   9632824 Nov 27 21:43 log.47556161._004911.job.log.1
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas       353 Nov 27 21:43 output.list
[2025-11-27 21:43:06] -rw-r--r-- 1 boincer umatlas       620 Nov 27 21:43 runtime_log
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas  11950080 Nov 27 21:43 result.tar.gz
[2025-11-27 21:43:06] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 21:43 runtime_log.err
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas       668 Nov 27 21:43 n5KODmybMi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0wJKDmVtxcam.diag
[2025-11-27 21:43:06] -rw-r--r-- 1 boincer umatlas     21314 Nov 27 21:43 stderr.txt
[2025-11-27 21:43:06] HITS file was successfully produced:
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas 907339848 Nov 27 21:41 shared/HITS.pool.root.1
[2025-11-27 21:43:06]  *** Contents of shared directory: ***
[2025-11-27 21:43:06] total 1298444
[2025-11-27 21:43:06] -rw-r--r-- 2 boincer umatlas 409691093 Nov 27 02:21 ATLAS.root_0
[2025-11-27 21:43:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 02:21 start_atlas.sh
[2025-11-27 21:43:06] -rw-r--r-- 2 boincer umatlas    590101 Nov 27 02:21 input.tar.gz
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas 907339848 Nov 27 21:41 HITS.pool.root.1
[2025-11-27 21:43:06] -rw------- 1 boincer umatlas  11950080 Nov 27 21:43 result.tar.gz
21:43:07 (25188): run_atlas exited; CPU time 534173.679608
21:43:07 (25188): called boinc_finish(0)

</stderr_txt>
]]>

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